ISMARA results: AT4G01250

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G01250

Z-value: 0.43

Transcription factors associated with AT4G01250

Gene Symbol	Gene ID	Gene Info
AT4G01250 TAIR	AT4G01250	WRKY family transcription factor

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
WRKY22	arTal_v1_Chr4_-_524249_524249	-0.23	2.3e-01	Click!

Activity profile of AT4G01250 motif

Sorted Z-values of AT4G01250 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr1_-_3392524_3392633 Show fit	1.93	AT1G10340.2 AT1G10340.1	AT1G10340 TAIR Show fit	Ankyrin repeat family protein
arTal_v1_Chr5_-_270646_270646 Show fit	1.69	AT5G01720.1	AT5G01720 TAIR Show fit	RNI-like superfamily protein
arTal_v1_Chr3_-_3325046_3325085 Show fit	1.68	AT3G10640.2 AT3G10640.1	VPS60.1 TAIR Show fit	SNF7 family protein
arTal_v1_Chr4_+_13275200_13275200 Show fit	1.62	AT4G26200.1	ACS7 TAIR Show fit	1-amino-cyclopropane-1-carboxylate synthase 7
arTal_v1_Chr3_+_8295617_8295617 Show fit	1.41	AT3G23240.1	ERF1 TAIR Show fit	ethylene response factor 1
arTal_v1_Chr4_+_12488040_12488040 Show fit	1.17	AT4G24040.1	TRE1 TAIR Show fit	trehalase 1
arTal_v1_Chr3_-_3738208_3738208 Show fit	1.10	AT3G11840.1	PUB24 TAIR Show fit	E3 ubiquitin-protein ligase PUB24-like protein
arTal_v1_Chr3_+_360921_360921 Show fit	0.65	AT3G02070.2 AT3G02070.1	AT3G02070 TAIR Show fit	Cysteine proteinases superfamily protein
arTal_v1_Chr5_+_18137349_18137349 Show fit	0.26	AT5G44910.1	AT5G44910 TAIR Show fit	Toll-Interleukin-Resistance (TIR) domain family protein
arTal_v1_Chr1_+_6765653_6765654 Show fit	0.25	AT1G19540.2 AT1G19540.1	AT1G19540 TAIR Show fit	NmrA-like negative transcriptional regulator family protein

Showing 1 to 10 of 11 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G01250

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.7	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0	1.6	GO:0009692	ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0	1.4	GO:0009873	ethylene-activated signaling pathway(GO:0009873)
0.1	1.2	GO:0046352	disaccharide catabolic process(GO:0046352)
0.2	1.1	GO:0002679	respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)

Showing 1 to 5 of 5 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.7	GO:0005771	multivesicular body(GO:0005771)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.6	GO:0016847	1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)

Showing 1 to 1 of 1 entries

Results for AT4G01250

Z-value: 0.43

Transcription factors associated with AT4G01250

Activity-expression correlation:

Activity profile of AT4G01250 motif

Sorted Z-values of AT4G01250 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G01250

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: