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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G00250

Z-value: 1.31

Transcription factors associated with AT4G00250

Gene Symbol Gene ID Gene Info
AT4G00250
AT4G00250 DNA-binding storekeeper protein-related transcriptional regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT4G00250arTal_v1_Chr4_-_113982_113982-0.135.2e-01Click!

Activity profile of AT4G00250 motif

Sorted Z-values of AT4G00250 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_4312103 6.52 AT2G10940.2
AT2G10940.1
AT2G10940
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_9072708 6.27 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
Chr3_+_10255906 6.21 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
Chr5_-_15378416 5.49 AT5G38410.3
AT5G38410.2
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_-_15378642 5.47 AT5G38410.1
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr1_-_4682309 5.30 AT1G13650.3
AT1G13650.4
AT1G13650.2
AT1G13650.1
AT1G13650
hypothetical protein
Chr3_-_197974 5.26 AT3G01500.1
CA1
carbonic anhydrase 1
Chr3_-_198160 5.20 AT3G01500.2
CA1
carbonic anhydrase 1
Chr1_-_29635931 5.18 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr3_-_198664 5.17 AT3G01500.3
CA1
carbonic anhydrase 1
Chr3_-_197564 5.08 AT3G01500.4
CA1
carbonic anhydrase 1
Chr1_+_3157501 4.95 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr5_-_15382071 4.88 AT5G38420.1
RBCS2B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_+_8863224 4.82 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
Chr5_+_4757856 4.69 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr1_-_4090857 4.69 AT1G12090.1
ELP
extensin-like protein
Chr5_+_17712203 4.68 AT5G44020.1
AT5G44020
HAD superfamily, subfamily IIIB acid phosphatase
Chr4_+_13391293 4.65 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr1_-_4394343 4.56 AT1G12900.3
AT1G12900.4
AT1G12900.1
AT1G12900.2
AT1G12900.5
GAPA-2
glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Chr2_+_14577083 4.55 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr1_-_10475969 4.50 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
Chr2_-_18744322 4.41 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
Chr4_+_18291218 4.41 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
Chr4_+_13390754 4.37 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr3_+_17228642 4.31 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr3_-_5508414 4.30 AT3G16250.1
PnsB3
NDH-dependent cyclic electron flow 1
Chr5_+_4758921 4.15 AT5G14740.9
CA2
carbonic anhydrase 2
Chr2_-_1800472 4.13 AT2G05070.1
LHCB2.2
photosystem II light harvesting complex protein 2.2
Chr1_-_7531108 4.10 AT1G21500.1
AT1G21500
hypothetical protein
Chr1_-_10473502 4.03 AT1G29910.1
CAB3
chlorophyll A/B binding protein 3
Chr2_+_2763449 4.01 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr5_+_22038165 3.96 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
Chr2_+_16476198 3.92 AT2G39470.1
AT2G39470.2
AT2G39470.3
PnsL1
PsbP-like protein 2
Chr1_-_20648891 3.88 AT1G55330.1
AGP21
arabinogalactan protein 21
Chr1_+_28053030 3.86 AT1G74670.1
GASA6
Gibberellin-regulated family protein
Chr3_+_1695156 3.86 AT3G05730.1
AT3G05730
defensin-like protein
Chr4_-_5779462 3.86 AT4G09010.1
AT4G09010.2
AT4G09010.3
TL29
ascorbate peroxidase 4
Chr4_-_12400231 3.84 AT4G23820.1
AT4G23820
Pectin lyase-like superfamily protein
Chr3_-_9492655 3.81 AT3G25920.1
RPL15
ribosomal protein L15
Chr1_+_10371675 3.79 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_5447880 3.75 AT1G15820.1
LHCB6
light harvesting complex photosystem II subunit 6
Chr3_+_23266227 3.74 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
Chr1_-_25049424 3.66 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr1_-_25049667 3.66 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr3_-_4744263 3.66 AT3G14240.1
AT3G14240
Subtilase family protein
Chr1_+_6409655 3.59 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
Chr1_+_4001113 3.58 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
Chr4_+_11334352 3.56 AT4G21280.1
AT4G21280.2
PSBQA
photosystem II subunit QA
Chr5_+_426226 3.55 AT5G02160.1
AT5G02160
transmembrane protein
Chr4_-_10391298 3.55 AT4G18970.1
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_10390991 3.52 AT4G18970.2
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_27853233 3.46 AT1G74070.2
AT1G74070.1
AT1G74070
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr3_-_7557969 3.44 AT3G21460.1
AT3G21460
Glutaredoxin family protein
Chr5_-_6976036 3.41 AT5G20630.1
GER3
germin 3
Chr1_-_7043392 3.41 AT1G20340.1
DRT112
Cupredoxin superfamily protein
Chr4_-_17355891 3.40 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr1_-_28423520 3.34 AT1G75690.1
LQY1
DnaJ/Hsp40 cysteine-rich domain superfamily protein
Chr5_-_18026077 3.34 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr5_+_18634041 3.34 AT5G45950.1
AT5G45950
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_5801 3.33 AT5G01015.2
AT5G01015.1
AT5G01015
transmembrane protein
Chr1_+_20614573 3.30 AT1G55260.1
AT1G55260.2
AT1G55260
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_6408007 3.30 AT4G10340.1
LHCB5
light harvesting complex of photosystem II 5
Chr3_-_19139423 3.29 AT3G51600.1
LTP5
lipid transfer protein 5
Chr1_+_11532199 3.26 AT1G32060.1
PRK
phosphoribulokinase
Chr5_+_1664040 3.24 AT5G05580.2
AT5G05580.1
FAD8
fatty acid desaturase 8
Chr1_-_4530222 3.24 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr1_-_598657 3.23 AT1G02730.1
CSLD5
cellulose synthase-like D5
Chr3_-_20341103 3.22 AT3G54890.3
AT3G54890.4
AT3G54890.2
AT3G54890.1
LHCA1
chlorophyll a-b binding protein 6
Chr1_+_898480 3.21 AT1G03600.1
PSB27
photosystem II family protein
Chr3_-_8589754 3.20 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr2_-_15137012 3.18 AT2G36050.1
OFP15
ovate family protein 15
Chr3_-_6882235 3.15 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Chr1_+_10477885 3.15 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr4_+_13725546 3.15 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
Chr3_-_7377186 3.14 AT3G21055.1
AT3G21055.2
PSBTN
photosystem II subunit T
Chr5_-_25373904 3.13 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
Chr1_+_6410947 3.08 AT1G18620.5
TRM3
LONGIFOLIA protein
Chr2_+_9636346 3.07 AT2G22670.1
AT2G22670.4
AT2G22670.2
AT2G22670.5
AT2G22670.3
IAA8
indoleacetic acid-induced protein 8
Chr1_-_6999839 3.05 AT1G20190.1
EXPA11
expansin 11
Chr3_+_2712236 3.05 AT3G08920.1
AT3G08920
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr5_-_25629615 3.01 AT5G64040.2
AT5G64040.1
PSAN
photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Chr5_-_8338032 3.01 AT5G24420.1
PGL5
6-phosphogluconolactonase 5
Chr1_+_4868346 3.01 AT1G14250.1
AT1G14250
GDA1/CD39 nucleoside phosphatase family protein
Chr1_-_28554810 3.01 AT1G76100.1
AT1G76100.2
PETE1
plastocyanin 1
Chr4_+_17243583 3.00 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr1_+_3008910 3.00 AT1G09310.1
AT1G09310
plant/protein (Protein of unknown function, DUF538)
Chr5_+_1919080 2.99 AT5G06290.1
AT5G06290.2
2-Cys Prx B
2-cysteine peroxiredoxin B
Chr5_-_7026533 2.98 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_6410033 2.98 AT1G18620.2
TRM3
LONGIFOLIA protein
Chr4_-_12768239 2.98 AT4G24770.1
RBP31
31-kDa RNA binding protein
Chr1_+_10149791 2.97 AT1G29070.1
AT1G29070
Ribosomal protein L34
Chr4_-_12769419 2.96 AT4G24770.2
RBP31
31-kDa RNA binding protein
Chr4_-_16583075 2.96 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr5_+_21479382 2.96 AT5G52970.1
AT5G52970.2
AT5G52970
thylakoid lumen 15.0 kDa protein
Chr4_+_13388290 2.95 AT4G26520.2
AT4G26520.1
AT4G26520.3
FBA7
Aldolase superfamily protein
Chr1_-_23956260 2.95 AT1G64510.1
AT1G64510.2
AT1G64510
Translation elongation factor EF1B/ribosomal protein S6 family protein
Chr5_+_21020014 2.90 AT5G51750.1
SBT1.3
subtilase 1.3
Chr2_+_13647699 2.89 AT2G32100.1
OFP16
ovate family protein 16
Chr1_-_6999523 2.89 AT1G20190.2
EXPA11
expansin 11
Chr3_+_10017321 2.89 AT3G27160.1
AT3G27160.2
GHS1
Ribosomal protein S21 family protein
Chr4_+_14149849 2.88 AT4G28660.1
AT4G28660.2
PSB28
photosystem II reaction center PSB28 protein
Chr1_+_25401514 2.88 AT1G67750.1
AT1G67750
Pectate lyase family protein
Chr4_+_12876822 2.88 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
Chr5_-_20712386 2.88 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_2249133 2.87 AT1G07320.2
AT1G07320.3
AT1G07320.4
RPL4
ribosomal protein L4
Chr1_+_5058583 2.87 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr5_-_17581275 2.86 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr3_+_21076505 2.85 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
Chr4_-_13398307 2.84 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr3_+_2717557 2.83 AT3G08940.2
AT3G08940.1
LHCB4.2
light harvesting complex photosystem II
Chr4_+_12870006 2.82 AT4G25050.2
AT4G25050.1
ACP4
acyl carrier protein 4
Chr5_-_7026753 2.82 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_17929581 2.82 AT3G48420.1
AT3G48420
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_18627950 2.81 AT5G45930.1
CHLI2
magnesium chelatase i2
Chr1_-_20719165 2.80 AT1G55490.1
AT1G55490.2
AT1G55490.4
AT1G55490.3
AT1G55490.5
CPN60B
chaperonin 60 beta
Chr2_-_1824480 2.80 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
Chr3_-_17495033 2.79 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
Chr3_+_188321 2.79 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr1_+_26687202 2.76 AT1G70760.1
NdhL
inorganic carbon transport protein-like protein
Chr1_-_6072129 2.74 AT1G17650.1
AT1G17650.2
GLYR2
glyoxylate reductase 2
Chr4_-_12772438 2.74 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr1_+_2248967 2.74 AT1G07320.1
RPL4
ribosomal protein L4
Chr2_+_17894796 2.74 AT2G43030.1
AT2G43030
Ribosomal protein L3 family protein
Chr3_+_19421397 2.73 AT3G52380.1
CP33
chloroplast RNA-binding protein 33
Chr4_-_13958107 2.72 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_208866 2.72 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
Chr5_-_23308680 2.71 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr3_-_20903080 2.71 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
Chr3_-_15617149 2.71 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_21068327 2.70 AT5G51820.1
PGM
phosphoglucomutase
Chr3_+_18973126 2.70 AT3G51080.1
GATA6
GATA transcription factor 6
Chr5_+_6457026 2.69 AT5G19190.1
AT5G19190
hypothetical protein
Chr1_+_10810877 2.69 AT1G30520.4
AT1G30520.3
AAE14
acyl-activating enzyme 14
Chr1_-_3880391 2.68 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr2_-_12173951 2.68 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr2_-_12277417 2.68 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr4_-_545566 2.68 AT4G01310.1
AT4G01310
Ribosomal L5P family protein
Chr3_-_15617309 2.68 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_1676999 2.67 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr5_-_9620533 2.67 AT5G27290.2
AT5G27290.1
AT5G27290
stress regulated protein
Chr3_-_5469594 2.66 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr5_+_5907775 2.65 AT5G17870.1
PSRP6
plastid-specific 50S ribosomal protein 6
Chr3_-_8623214 2.64 AT3G23880.1
AT3G23880
F-box and associated interaction domains-containing protein
Chr5_+_5907589 2.63 AT5G17870.2
PSRP6
plastid-specific 50S ribosomal protein 6
Chr3_-_23165387 2.61 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
Chr2_+_1676717 2.61 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr2_-_2588448 2.61 AT2G06520.1
PSBX
photosystem II subunit X
Chr1_+_10810397 2.60 AT1G30520.1
AT1G30520.2
AAE14
acyl-activating enzyme 14
Chr4_+_13388719 2.60 AT4G26520.4
FBA7
Aldolase superfamily protein
Chr5_-_2993213 2.59 AT5G09650.1
PPa6
pyrophosphorylase 6
Chr2_+_10241875 2.59 AT2G24090.1
PRPL35
Ribosomal protein L35
Chr1_-_19052582 2.58 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
Chr2_-_12277245 2.58 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr1_-_18405493 2.57 AT1G49730.3
AT1G49730.4
AT1G49730.2
AT1G49730.5
AT1G49730.1
AT1G49730
Protein kinase superfamily protein
Chr4_+_15819489 2.57 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr4_-_10188981 2.57 AT4G18440.1
AT4G18440
L-Aspartase-like family protein
Chr3_+_19342014 2.56 AT3G52150.1
AT3G52150.2
PSRP2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_-_7591259 2.55 AT4G12980.1
AT4G12980
Auxin-responsive family protein
Chr4_+_7521257 2.55 AT4G12800.2
AT4G12800.1
PSAL
photosystem I subunit l
Chr1_+_27452748 2.53 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr1_+_25374072 2.52 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
Chr1_-_25758232 2.51 AT1G68590.2
PSRP3/1
Ribosomal protein PSRP-3/Ycf65
Chr4_-_9157133 2.51 AT4G16155.1
AT4G16155
dihydrolipoamide dehydrogenase
Chr3_-_219104 2.50 AT3G01550.2
AT3G01550.1
PPT2
phosphoenolpyruvate (pep)/phosphate translocator 2
Chr5_+_8365601 2.50 AT5G24490.1
AT5G24490
30S ribosomal protein
Chr1_+_27991165 2.49 AT1G74470.1
AT1G74470
Pyridine nucleotide-disulfide oxidoreductase family protein
Chr1_-_25758411 2.49 AT1G68590.1
PSRP3/1
Ribosomal protein PSRP-3/Ycf65
Chr3_+_8610979 2.48 AT3G23840.1
AT3G23840
HXXXD-type acyl-transferase family protein
Chr4_+_9803624 2.48 AT4G17600.1
LIL3:1
Chlorophyll A-B binding family protein
Chr4_-_14204061 2.48 AT4G28750.1
PSAE-1
Photosystem I reaction centre subunit IV / PsaE protein
Chr4_-_15429113 2.47 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
Chr2_-_19563960 2.47 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr2_-_7496292 2.47 AT2G17230.1
EXL5
EXORDIUM like 5
Chr2_-_17837618 2.46 AT2G42870.1
PAR1
phy rapidly regulated 1
Chr4_+_13177356 2.46 AT4G25960.1
ABCB2
P-glycoprotein 2
Chr1_+_29117500 2.45 AT1G77490.1
AT1G77490.2
TAPX
thylakoidal ascorbate peroxidase
Chr3_+_3499537 2.45 AT3G11170.1
FAD7
fatty acid desaturase 7
Chr5_+_19825078 2.44 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
Chr4_-_10203469 2.44 AT4G18480.1
CHLI1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_+_10651744 2.44 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_24229063 2.44 AT1G65230.1
AT1G65230
transmembrane protein, putative (DUF2358)
Chr1_+_8027294 2.43 AT1G22690.3
AT1G22690.2
AT1G22690
Gibberellin-regulated family protein
Chr4_-_7893727 2.43 AT4G13575.1
AT4G13575.2
AT4G13575
hypothetical protein
Chr5_-_20940895 2.43 AT5G51550.1
EXL3
EXORDIUM like 3
Chr3_+_5116021 2.43 AT3G15190.1
PRPS20
chloroplast 30S ribosomal protein S20
Chr5_-_18371021 2.42 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr2_+_11550705 2.42 AT2G27060.1
AT2G27060.2
AT2G27060.3
AT2G27060
Leucine-rich repeat protein kinase family protein
Chr5_-_671687 2.42 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
Chr1_-_15607966 2.42 AT1G41830.1
SKS6
SKU5-similar 6
Chr3_+_22745514 2.41 AT3G61470.1
LHCA2
photosystem I light harvesting complex protein
Chr3_-_18628888 2.41 AT3G50240.3
AT3G50240.2
AT3G50240.4
AT3G50240.1
KICP-02
ATP binding microtubule motor family protein
Chr3_-_21070356 2.41 AT3G56910.1
PSRP5
plastid-specific 50S ribosomal protein 5
Chr3_-_19467455 2.41 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr1_-_22308289 2.40 AT1G60550.1
ECHID
enoyl-CoA hydratase/isomerase D
Chr2_-_1149261 2.40 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_18417568 2.40 AT3G49670.1
BAM2
Leucine-rich receptor-like protein kinase family protein
Chr2_-_15797059 2.40 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_21170048 2.39 AT5G52100.1
CRR1
Dihydrodipicolinate reductase, bacterial/plant
Chr1_+_11396402 2.39 AT1G31800.1
CYP97A3
cytochrome P450, family 97, subfamily A, polypeptide 3
Chr5_-_2182538 2.39 AT5G07020.1
AT5G07020
proline-rich family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G00250

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.9 17.1 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
2.3 41.0 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
2.0 6.0 GO:0009233 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
1.8 22.8 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
1.3 23.2 GO:1901259 chloroplast rRNA processing(GO:1901259)
1.3 3.8 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
1.3 11.5 GO:0051513 regulation of monopolar cell growth(GO:0051513)
1.2 4.6 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
1.1 3.4 GO:0007639 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
1.1 2.2 GO:0042549 photosystem II stabilization(GO:0042549)
1.1 5.6 GO:0010450 inflorescence meristem growth(GO:0010450)
1.0 11.3 GO:0010206 photosystem II repair(GO:0010206)
1.0 5.0 GO:0042873 phosphoglycerate transport(GO:0015713) aldonate transport(GO:0042873)
1.0 3.9 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
1.0 17.4 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.9 10.5 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.9 2.6 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.8 0.8 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289) regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.8 2.5 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.8 4.2 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.8 3.2 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.8 3.2 GO:0090309 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.7 3.0 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.7 2.2 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.7 9.3 GO:0032544 plastid translation(GO:0032544)
0.7 4.3 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.7 2.1 GO:0080051 cutin transport(GO:0080051)
0.7 6.9 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.7 4.1 GO:0043478 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.7 5.3 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.7 5.2 GO:0010065 primary meristem tissue development(GO:0010065)
0.7 0.7 GO:0006545 glycine biosynthetic process(GO:0006545)
0.7 3.9 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.6 6.4 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.6 1.9 GO:0035404 histone-serine phosphorylation(GO:0035404) histone H3-S10 phosphorylation(GO:0043987)
0.6 2.6 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.6 6.4 GO:0015976 carbon utilization(GO:0015976)
0.6 4.4 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.6 2.5 GO:0033306 phytol metabolic process(GO:0033306)
0.6 1.9 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.6 1.8 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.6 2.4 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.6 1.8 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.6 7.2 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.6 1.7 GO:0071258 cellular response to gravity(GO:0071258)
0.6 2.8 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.6 2.8 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.5 1.6 GO:0010447 response to acidic pH(GO:0010447)
0.5 3.8 GO:0051125 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.5 2.7 GO:0009590 detection of gravity(GO:0009590)
0.5 3.2 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.5 2.7 GO:0009647 skotomorphogenesis(GO:0009647)
0.5 2.1 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.5 2.1 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.5 1.6 GO:0019354 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.5 2.6 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.5 2.1 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.5 0.5 GO:0042593 glucose homeostasis(GO:0042593)
0.5 1.6 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.5 2.6 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.5 3.6 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.5 1.5 GO:1990532 stress response to nickel ion(GO:1990532)
0.5 0.5 GO:1902182 shoot apical meristem development(GO:1902182)
0.5 1.5 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.5 3.0 GO:0010444 guard mother cell differentiation(GO:0010444)
0.5 1.5 GO:0019695 choline metabolic process(GO:0019695)
0.5 9.5 GO:0010207 photosystem II assembly(GO:0010207)
0.5 3.3 GO:0006021 inositol biosynthetic process(GO:0006021)
0.5 2.4 GO:0045922 negative regulation of fatty acid metabolic process(GO:0045922)
0.5 1.4 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.5 55.7 GO:0015979 photosynthesis(GO:0015979)
0.4 0.4 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.4 1.7 GO:0001578 microtubule bundle formation(GO:0001578)
0.4 1.2 GO:0045682 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.4 2.5 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.4 0.8 GO:0034969 histone arginine methylation(GO:0034969)
0.4 5.7 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.4 1.2 GO:0034982 mitochondrial protein processing(GO:0034982) cristae formation(GO:0042407)
0.4 2.4 GO:0006013 mannose metabolic process(GO:0006013)
0.4 1.2 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.4 2.0 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.4 1.6 GO:0016139 glycoside catabolic process(GO:0016139)
0.4 1.9 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.4 1.1 GO:0031441 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.4 1.5 GO:0006788 heme oxidation(GO:0006788)
0.4 1.9 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.4 1.1 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.4 1.1 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.4 1.1 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.4 14.1 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.4 1.1 GO:0036292 DNA rewinding(GO:0036292)
0.4 1.4 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.4 2.9 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.4 0.7 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.4 1.1 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.4 1.8 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.3 1.0 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.3 1.7 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.3 1.7 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.3 1.0 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.3 1.0 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.3 7.5 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.3 2.2 GO:0015837 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.3 2.2 GO:0072337 modified amino acid transport(GO:0072337)
0.3 1.9 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.3 0.9 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.3 4.4 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.3 4.0 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.3 2.2 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.3 0.9 GO:0051639 actin filament network formation(GO:0051639)
0.3 0.9 GO:0090549 response to carbon starvation(GO:0090549)
0.3 2.1 GO:0080117 secondary growth(GO:0080117)
0.3 0.9 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.3 0.9 GO:0006348 chromatin silencing at telomere(GO:0006348) DNA replication preinitiation complex assembly(GO:0071163)
0.3 1.2 GO:0000023 maltose metabolic process(GO:0000023)
0.3 0.9 GO:0035264 multicellular organism growth(GO:0035264) regulation of multicellular organism growth(GO:0040014) sepal giant cell differentiation(GO:0090392) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.3 1.2 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.3 0.6 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.3 2.6 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.3 2.9 GO:1990937 xylan acetylation(GO:1990937)
0.3 2.6 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.3 2.6 GO:0006825 copper ion transport(GO:0006825)
0.3 3.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.3 1.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.3 1.4 GO:0007142 male meiosis II(GO:0007142)
0.3 2.0 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.3 15.9 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.3 1.1 GO:0090342 regulation of cell aging(GO:0090342)
0.3 1.1 GO:0051293 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.3 1.1 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.3 1.4 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.3 1.6 GO:0010047 fruit dehiscence(GO:0010047)
0.3 0.3 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.3 1.6 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.3 1.3 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.3 0.8 GO:0090143 nucleoid organization(GO:0090143)
0.3 1.3 GO:0005980 glycogen catabolic process(GO:0005980)
0.3 1.0 GO:1990428 miRNA transport(GO:1990428)
0.3 2.8 GO:0070828 heterochromatin organization(GO:0070828)
0.3 0.8 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.3 11.1 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.3 3.0 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.3 0.8 GO:0036115 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.2 0.7 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.2 2.2 GO:0044774 mitotic DNA integrity checkpoint(GO:0044774)
0.2 0.7 GO:0034389 lipid particle organization(GO:0034389)
0.2 1.4 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.7 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.2 0.9 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.2 2.1 GO:0048640 negative regulation of developmental growth(GO:0048640)
0.2 0.5 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.2 0.7 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 1.1 GO:1901271 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.2 9.1 GO:0048825 cotyledon development(GO:0048825)
0.2 6.3 GO:0016132 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.2 6.8 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.2 0.9 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 1.1 GO:0019430 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.2 1.3 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.2 1.5 GO:0046655 folic acid metabolic process(GO:0046655)
0.2 0.2 GO:0051480 regulation of cytosolic calcium ion concentration(GO:0051480)
0.2 0.8 GO:0001887 selenium compound metabolic process(GO:0001887)
0.2 0.4 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.2 3.1 GO:0030488 tRNA methylation(GO:0030488)
0.2 0.8 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.2 2.0 GO:0036065 fucosylation(GO:0036065)
0.2 0.6 GO:0010446 response to alkaline pH(GO:0010446)
0.2 0.4 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.2 2.6 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.2 2.0 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.2 0.6 GO:0071457 cellular response to ozone(GO:0071457)
0.2 0.6 GO:0042539 hypotonic salinity response(GO:0042539)
0.2 0.6 GO:0031506 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.2 1.0 GO:0060631 regulation of meiosis I(GO:0060631)
0.2 1.9 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.2 3.1 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.2 0.8 GO:0009865 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.2 3.9 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.2 0.9 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.2 1.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.2 1.3 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.2 0.7 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.2 1.6 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 4.3 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.2 2.5 GO:0009750 response to fructose(GO:0009750)
0.2 2.0 GO:0009704 de-etiolation(GO:0009704)
0.2 0.5 GO:0055089 fatty acid homeostasis(GO:0055089)
0.2 1.8 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.2 11.9 GO:0007018 microtubule-based movement(GO:0007018)
0.2 0.7 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.2 2.7 GO:0046688 response to copper ion(GO:0046688)
0.2 1.6 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.2 0.5 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.2 1.1 GO:0015689 molybdate ion transport(GO:0015689)
0.2 1.5 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.2 0.5 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.2 0.8 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 3.9 GO:0008360 regulation of cell shape(GO:0008360)
0.1 0.7 GO:0006449 regulation of translational termination(GO:0006449)
0.1 1.5 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 1.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 1.2 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 1.2 GO:0042851 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 0.4 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 0.9 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.1 0.7 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.1 1.5 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 0.8 GO:0006567 threonine catabolic process(GO:0006567)
0.1 0.5 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.1 2.2 GO:0000373 Group II intron splicing(GO:0000373)
0.1 2.0 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 0.7 GO:0048830 adventitious root development(GO:0048830)
0.1 0.7 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 0.4 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.9 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.1 17.3 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.1 0.4 GO:0010338 leaf formation(GO:0010338)
0.1 0.4 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.1 11.2 GO:0045490 pectin catabolic process(GO:0045490)
0.1 1.7 GO:0009641 shade avoidance(GO:0009641)
0.1 0.8 GO:0043066 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.1 0.5 GO:0097502 mannosylation(GO:0097502)
0.1 3.7 GO:0006284 base-excision repair(GO:0006284)
0.1 0.3 GO:1901379 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 3.3 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 0.7 GO:0006779 porphyrin-containing compound biosynthetic process(GO:0006779)
0.1 1.0 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.1 0.3 GO:0016572 histone phosphorylation(GO:0016572)
0.1 0.3 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 0.7 GO:0010364 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.1 0.5 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.5 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 1.0 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 1.5 GO:0010093 specification of floral organ identity(GO:0010093)
0.1 0.5 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 0.4 GO:0046578 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012) regulation of Ras protein signal transduction(GO:0046578) regulation of small GTPase mediated signal transduction(GO:0051056)
0.1 1.9 GO:0080156 mitochondrial mRNA modification(GO:0080156) mitochondrial RNA modification(GO:1900864)
0.1 0.3 GO:0010028 xanthophyll cycle(GO:0010028)
0.1 0.5 GO:2000580 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.1 1.3 GO:0007140 male meiosis(GO:0007140)
0.1 0.5 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 1.0 GO:0006270 DNA replication initiation(GO:0006270)
0.1 0.4 GO:0006097 glyoxylate cycle(GO:0006097)
0.1 0.4 GO:0044848 cell cycle phase(GO:0022403) biological phase(GO:0044848) mitotic cell cycle phase(GO:0098763)
0.1 0.6 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.4 GO:0071277 cellular response to calcium ion(GO:0071277)
0.1 1.5 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.1 1.5 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.1 GO:0060771 phyllotactic patterning(GO:0060771) leaf phyllotactic patterning(GO:0060772)
0.1 2.2 GO:0009612 response to mechanical stimulus(GO:0009612)
0.1 0.3 GO:1990884 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.1 2.3 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.1 0.4 GO:0009304 tRNA transcription(GO:0009304)
0.1 0.2 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 0.8 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 7.5 GO:0000725 recombinational repair(GO:0000725)
0.1 0.5 GO:0035627 ceramide transport(GO:0035627)
0.1 1.4 GO:0006574 valine catabolic process(GO:0006574)
0.1 0.4 GO:0080119 ER body organization(GO:0080119)
0.1 0.9 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.1 0.9 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 3.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.5 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 0.4 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 0.3 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.1 1.0 GO:0006265 DNA topological change(GO:0006265)
0.1 0.7 GO:0010098 suspensor development(GO:0010098)
0.1 0.2 GO:0071452 cellular response to singlet oxygen(GO:0071452)
0.1 0.3 GO:0000077 DNA damage checkpoint(GO:0000077)
0.1 1.4 GO:0010152 pollen maturation(GO:0010152)
0.1 1.3 GO:0009638 phototropism(GO:0009638)
0.1 3.5 GO:0016485 protein processing(GO:0016485)
0.1 0.5 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.1 1.1 GO:0010274 hydrotropism(GO:0010274)
0.1 0.2 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.1 0.2 GO:0033194 response to hydroperoxide(GO:0033194)
0.1 2.3 GO:0010075 regulation of meristem growth(GO:0010075)
0.1 1.5 GO:0051225 spindle assembly(GO:0051225)
0.1 5.2 GO:0009875 pollen-pistil interaction(GO:0009875)
0.1 1.0 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.1 1.1 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.1 GO:0051972 regulation of telomerase activity(GO:0051972)
0.1 0.2 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.1 0.4 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 0.7 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.1 0.7 GO:0009085 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.1 0.6 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 0.6 GO:0006308 DNA catabolic process(GO:0006308)
0.1 0.3 GO:0006678 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.1 1.1 GO:0098586 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.1 0.3 GO:0019427 acetate metabolic process(GO:0006083) acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.1 0.4 GO:0034227 tRNA thio-modification(GO:0034227)
0.1 0.4 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.1 0.9 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.1 0.5 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.1 2.4 GO:1903825 organic acid transmembrane transport(GO:1903825) carboxylic acid transmembrane transport(GO:1905039)
0.1 0.7 GO:0008356 asymmetric cell division(GO:0008356)
0.1 1.1 GO:0046785 microtubule polymerization(GO:0046785)
0.1 2.9 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 0.7 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.1 0.6 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 1.7 GO:0099518 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.1 1.6 GO:0019915 lipid storage(GO:0019915)
0.1 0.6 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.7 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.1 0.3 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.6 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.1 0.3 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.1 0.3 GO:0043486 histone exchange(GO:0043486)
0.1 1.0 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 1.4 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.1 0.6 GO:2000027 regulation of leaf morphogenesis(GO:1901371) regulation of organ morphogenesis(GO:2000027)
0.0 0.3 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.3 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.7 GO:0016556 mRNA modification(GO:0016556)
0.0 0.2 GO:0071836 nectar secretion(GO:0071836)
0.0 1.0 GO:0019852 L-ascorbic acid metabolic process(GO:0019852) L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.3 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 0.6 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 1.2 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.3 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.3 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.2 GO:0032776 DNA methylation on cytosine(GO:0032776)
0.0 1.4 GO:0051667 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.0 3.5 GO:0010876 lipid localization(GO:0010876)
0.0 1.2 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.4 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.2 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.0 19.9 GO:0006412 translation(GO:0006412)
0.0 0.1 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 0.7 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.2 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.4 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.0 0.4 GO:0000966 RNA 5'-end processing(GO:0000966)
0.0 0.6 GO:0006739 NADP metabolic process(GO:0006739)
0.0 0.3 GO:0080086 stamen filament development(GO:0080086)
0.0 0.4 GO:0019856 pyrimidine nucleobase biosynthetic process(GO:0019856)
0.0 0.2 GO:0006884 cell volume homeostasis(GO:0006884)
0.0 1.1 GO:0022604 regulation of cell morphogenesis(GO:0022604)
0.0 0.9 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.4 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.3 GO:0001709 cell fate determination(GO:0001709)
0.0 0.5 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.1 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.0 0.2 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.5 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.4 GO:0015986 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0 0.6 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.0 GO:0046705 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.0 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.4 GO:0050821 protein stabilization(GO:0050821)
0.0 1.0 GO:0071322 cellular response to carbohydrate stimulus(GO:0071322)
0.0 0.1 GO:0010269 response to selenium ion(GO:0010269)
0.0 0.1 GO:0000050 urea cycle(GO:0000050)
0.0 0.3 GO:0046292 formaldehyde metabolic process(GO:0046292)
0.0 0.4 GO:0010212 response to ionizing radiation(GO:0010212)
0.0 0.3 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.2 GO:0051156 glucose 6-phosphate metabolic process(GO:0051156)
0.0 0.1 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.0 1.0 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.4 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.5 GO:0006081 cellular aldehyde metabolic process(GO:0006081)
0.0 0.3 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.0 0.1 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.9 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.0 GO:0043446 cellular alkane metabolic process(GO:0043446)
0.0 0.4 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.2 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.3 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.4 GO:0010051 xylem and phloem pattern formation(GO:0010051)
0.0 0.6 GO:0006400 tRNA modification(GO:0006400)
0.0 0.4 GO:0042330 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.4 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.6 GO:0018958 phenol-containing compound metabolic process(GO:0018958)
0.0 0.0 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.0 0.1 GO:0010584 pollen exine formation(GO:0010584)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
2.3 20.8 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
1.6 11.4 GO:0000311 plastid large ribosomal subunit(GO:0000311)
1.4 11.5 GO:0009538 photosystem I reaction center(GO:0009538)
1.3 6.5 GO:0010007 magnesium chelatase complex(GO:0010007)
1.1 44.7 GO:0010319 stromule(GO:0010319)
1.0 3.0 GO:0030093 chloroplast photosystem I(GO:0030093)
1.0 27.9 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
1.0 1.0 GO:0031897 Tic complex(GO:0031897)
0.9 10.8 GO:0031977 thylakoid lumen(GO:0031977)
0.9 26.8 GO:0009523 photosystem II(GO:0009523)
0.8 2.4 GO:0009522 photosystem I(GO:0009522)
0.7 38.2 GO:0010287 plastoglobule(GO:0010287)
0.7 10.7 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.6 2.6 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.6 2.5 GO:0070505 pollen coat(GO:0070505)
0.6 0.6 GO:0009509 chromoplast(GO:0009509)
0.6 2.4 GO:0016461 unconventional myosin complex(GO:0016461)
0.5 107.7 GO:0009535 chloroplast thylakoid membrane(GO:0009535)
0.5 1.9 GO:0032133 chromosome passenger complex(GO:0032133)
0.5 6.1 GO:0045298 tubulin complex(GO:0045298)
0.4 57.1 GO:0009579 thylakoid(GO:0009579)
0.4 1.7 GO:1990752 microtubule end(GO:1990752)
0.4 1.6 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.4 5.4 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.4 4.0 GO:0042555 MCM complex(GO:0042555)
0.4 1.2 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.4 1.6 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.4 1.5 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.3 2.0 GO:0031209 SCAR complex(GO:0031209)
0.3 1.0 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.3 0.9 GO:0032432 actin filament bundle(GO:0032432)
0.3 2.7 GO:0010369 chromocenter(GO:0010369)
0.3 1.8 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.3 0.8 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.3 0.8 GO:0043186 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.3 0.8 GO:0070382 exocytic vesicle(GO:0070382)
0.2 2.4 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.2 1.2 GO:0009346 citrate lyase complex(GO:0009346)
0.2 48.0 GO:0048046 apoplast(GO:0048046)
0.2 4.8 GO:0009295 nucleoid(GO:0009295)
0.2 1.3 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.2 0.9 GO:0000812 Swr1 complex(GO:0000812)
0.2 0.9 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.2 0.6 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.2 1.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.2 1.2 GO:0005787 signal peptidase complex(GO:0005787)
0.2 1.2 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.2 0.7 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 1.7 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.2 64.4 GO:0009532 plastid stroma(GO:0009532)
0.2 0.5 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 1.5 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 0.7 GO:0030126 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.1 19.1 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.7 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 24.6 GO:0009505 plant-type cell wall(GO:0009505)
0.1 0.4 GO:0030896 checkpoint clamp complex(GO:0030896)
0.1 1.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 0.5 GO:0031012 extracellular matrix(GO:0031012)
0.1 2.9 GO:0005871 kinesin complex(GO:0005871)
0.1 1.8 GO:0000792 heterochromatin(GO:0000792)
0.1 0.8 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.1 1.1 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 0.5 GO:0030286 dynein complex(GO:0030286)
0.1 0.7 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 3.4 GO:0009528 plastid inner membrane(GO:0009528)
0.1 14.4 GO:0015934 large ribosomal subunit(GO:0015934)
0.1 1.8 GO:0005875 microtubule associated complex(GO:0005875)
0.1 0.4 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 0.3 GO:0032044 DSIF complex(GO:0032044)
0.1 0.5 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 0.5 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 0.5 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 2.9 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.1 5.7 GO:0005874 microtubule(GO:0005874)
0.1 1.5 GO:0005811 lipid particle(GO:0005811)
0.1 0.7 GO:0043596 nuclear replication fork(GO:0043596)
0.1 0.2 GO:0009527 plastid outer membrane(GO:0009527)
0.1 0.4 GO:0044545 NSL complex(GO:0044545)
0.1 0.8 GO:0031902 late endosome membrane(GO:0031902)
0.1 13.5 GO:0009941 chloroplast envelope(GO:0009941)
0.1 0.2 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.3 GO:0030863 cortical cytoskeleton(GO:0030863)
0.1 6.4 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.5 GO:0010168 ER body(GO:0010168)
0.0 0.7 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 4.6 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.1 GO:0030870 Mre11 complex(GO:0030870)
0.0 0.3 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.2 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.1 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.2 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 0.5 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 0.3 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 51.8 GO:0005576 extracellular region(GO:0005576)
0.0 0.5 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.1 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 0.5 GO:0071004 U2-type prespliceosome(GO:0071004) prespliceosome(GO:0071010)
0.0 0.3 GO:0046540 U4/U6 x U5 tri-snRNP complex(GO:0046540)
0.0 0.3 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.2 GO:0016459 myosin complex(GO:0016459)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
3.9 23.2 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
2.2 6.5 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
2.1 53.5 GO:0016168 chlorophyll binding(GO:0016168)
1.6 4.9 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
1.5 4.6 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
1.3 11.8 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
1.3 3.8 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
1.2 4.8 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
1.1 3.4 GO:0015026 coreceptor activity(GO:0015026)
1.1 6.5 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
1.1 3.2 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
1.1 5.3 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
1.0 14.6 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.9 5.6 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.9 12.1 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.9 2.7 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.9 2.6 GO:0009374 biotin binding(GO:0009374)
0.9 4.3 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.9 2.6 GO:0016842 amidine-lyase activity(GO:0016842)
0.9 6.8 GO:0019137 thioglucosidase activity(GO:0019137)
0.9 3.4 GO:0050162 oxalate oxidase activity(GO:0050162)
0.8 3.3 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.8 5.0 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.8 3.2 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.8 2.4 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.8 2.4 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.8 3.2 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.8 25.3 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.7 7.2 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.7 1.4 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.7 2.1 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.7 2.8 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.7 0.7 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.7 2.8 GO:0009885 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.7 2.0 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.7 2.0 GO:0004072 aspartate kinase activity(GO:0004072)
0.6 2.5 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.6 1.9 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.6 2.4 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.6 1.8 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.6 1.2 GO:0047912 galacturonokinase activity(GO:0047912)
0.6 1.8 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.6 17.7 GO:0008266 poly(U) RNA binding(GO:0008266)
0.6 2.9 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.6 1.7 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.5 3.8 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.5 2.1 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.5 1.6 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.5 12.8 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.5 2.5 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.5 2.4 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.5 2.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.5 1.9 GO:0035175 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.5 3.6 GO:0042299 lupeol synthase activity(GO:0042299)
0.4 1.3 GO:0045430 chalcone isomerase activity(GO:0045430)
0.4 3.9 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.4 2.1 GO:0004127 cytidylate kinase activity(GO:0004127)
0.4 2.5 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.4 2.1 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.4 1.6 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.4 4.9 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.4 0.8 GO:0016841 ammonia-lyase activity(GO:0016841)
0.4 2.0 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.4 2.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.4 1.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.4 3.1 GO:0008083 growth factor activity(GO:0008083)
0.4 2.3 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.4 1.9 GO:0008430 selenium binding(GO:0008430)
0.4 1.9 GO:0004333 fumarate hydratase activity(GO:0004333)
0.4 1.9 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.4 1.1 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.4 3.0 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.4 1.1 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.4 1.1 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.4 1.8 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.3 3.8 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.3 0.3 GO:0035173 histone kinase activity(GO:0035173)
0.3 3.1 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.3 1.0 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.3 2.7 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.3 1.3 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.3 4.0 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.3 4.0 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.3 1.3 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.3 2.9 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.3 3.8 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.3 1.6 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.3 6.3 GO:0003688 DNA replication origin binding(GO:0003688)
0.3 1.0 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.3 4.1 GO:0051192 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.3 2.7 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.3 3.3 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.3 2.4 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.3 1.5 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.3 6.8 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.3 3.0 GO:0008169 C-methyltransferase activity(GO:0008169)
0.3 4.1 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.3 1.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.3 7.0 GO:0004565 beta-galactosidase activity(GO:0004565)
0.3 3.1 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.3 0.6 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.3 0.8 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.3 3.0 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.3 2.7 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.3 1.1 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.3 5.5 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.3 0.8 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.3 0.8 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.2 1.0 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.2 8.1 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.2 0.7 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.2 1.9 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 7.8 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.2 1.6 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.2 0.7 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.2 0.7 GO:0005344 oxygen transporter activity(GO:0005344)
0.2 2.5 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 0.7 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.2 1.8 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 1.6 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.2 1.1 GO:0016768 spermine synthase activity(GO:0016768)
0.2 1.5 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.2 0.9 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.2 0.7 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.2 8.6 GO:0016759 cellulose synthase activity(GO:0016759)
0.2 0.6 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.2 1.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 0.6 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.2 0.6 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.2 1.5 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.2 0.6 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.2 1.7 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2 4.0 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.2 1.2 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.2 0.6 GO:0036310 annealing helicase activity(GO:0036310)
0.2 0.6 GO:0005034 osmosensor activity(GO:0005034)
0.2 1.4 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.2 0.6 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.2 0.6 GO:0051010 microtubule plus-end binding(GO:0051010)
0.2 1.9 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.2 1.0 GO:0016676 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.2 1.2 GO:0047958 glycine:2-oxoglutarate aminotransferase activity(GO:0047958)
0.2 8.6 GO:0019843 rRNA binding(GO:0019843)
0.2 3.4 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.2 13.5 GO:0003777 microtubule motor activity(GO:0003777)
0.2 0.5 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.2 1.3 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.2 0.5 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.2 3.8 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 0.7 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.2 1.4 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.2 2.2 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.2 4.0 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.2 1.0 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.2 0.3 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.2 0.8 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.2 0.5 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.2 2.7 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.2 0.6 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.2 0.6 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.2 0.9 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.2 1.1 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.2 1.5 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.2 0.5 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.2 0.6 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.2 3.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.7 GO:0004325 ferrochelatase activity(GO:0004325)
0.1 1.0 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.1 0.7 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.1 3.0 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 0.6 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 3.9 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 1.5 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.1 2.7 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.1 4.4 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 0.5 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 29.0 GO:0003735 structural constituent of ribosome(GO:0003735)
0.1 1.2 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 0.9 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 0.6 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.1 0.1 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.1 0.5 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 6.4 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.1 2.1 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 1.5 GO:0004017 adenylate kinase activity(GO:0004017)
0.1 1.0 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.1 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.1 5.8 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 1.4 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 0.9 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.1 12.8 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 1.1 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 1.0 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 1.1 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.1 0.3 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.4 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.5 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.5 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 0.2 GO:0052381 tRNA dimethylallyltransferase activity(GO:0052381)
0.1 0.3 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.1 0.9 GO:0043495 protein anchor(GO:0043495)
0.1 0.7 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.3 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.1 1.4 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.1 0.4 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.1 1.6 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.1 4.0 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 0.3 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.1 0.7 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 0.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 1.3 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.5 GO:1902388 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.4 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 0.4 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 1.2 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 0.8 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 1.2 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.9 GO:0004161 dimethylallyltranstransferase activity(GO:0004161)
0.1 0.9 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 0.8 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.1 0.4 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 5.9 GO:0008017 microtubule binding(GO:0008017)
0.1 1.2 GO:0004124 cysteine synthase activity(GO:0004124)
0.1 5.1 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 1.1 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.1 0.4 GO:0004448 isocitrate dehydrogenase activity(GO:0004448)
0.1 0.4 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.2 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.1 0.3 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.1 0.5 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.3 GO:0004348 glucosylceramidase activity(GO:0004348)
0.1 0.7 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 0.5 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.1 0.4 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.1 1.8 GO:0008810 cellulase activity(GO:0008810)
0.1 0.7 GO:0017136 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 1.2 GO:0000049 tRNA binding(GO:0000049)
0.1 0.4 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1 4.1 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 2.8 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.1 0.9 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.1 0.2 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 7.4 GO:0009055 electron carrier activity(GO:0009055)
0.1 0.2 GO:0015377 cation:chloride symporter activity(GO:0015377)
0.1 2.4 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.1 0.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.3 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 2.9 GO:0003993 acid phosphatase activity(GO:0003993)
0.1 1.6 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.1 2.6 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1 1.6 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 0.3 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 0.5 GO:0017048 Rho GTPase binding(GO:0017048)
0.1 0.3 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.1 0.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.2 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.5 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.1 0.6 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 0.3 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.0 0.3 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 8.9 GO:0043531 ADP binding(GO:0043531)
0.0 0.4 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.7 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 1.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.2 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.0 1.1 GO:0051087 chaperone binding(GO:0051087)
0.0 0.4 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.2 GO:0005230 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.0 0.3 GO:0005047 signal recognition particle binding(GO:0005047)
0.0 0.2 GO:0070704 sterol desaturase activity(GO:0070704)
0.0 0.2 GO:0005355 fructose transmembrane transporter activity(GO:0005353) glucose transmembrane transporter activity(GO:0005355)
0.0 0.3 GO:0010011 auxin binding(GO:0010011)
0.0 0.1 GO:0019825 oxygen binding(GO:0019825)
0.0 0.7 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.2 GO:0051184 cofactor transporter activity(GO:0051184)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 1.3 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.1 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 0.2 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.2 GO:0080115 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.5 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 1.1 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.3 GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity(GO:0051903)
0.0 0.1 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 0.2 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.1 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.4 GO:0017171 serine-type peptidase activity(GO:0008236) serine hydrolase activity(GO:0017171)
0.0 0.2 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.3 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.1 GO:0004623 phospholipase A2 activity(GO:0004623)
0.0 0.7 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.7 GO:0016279 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.0 0.2 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.1 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.2 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.1 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.0 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.6 20.7 PID CMYB PATHWAY C-MYB transcription factor network
0.8 3.3 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.6 3.8 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.6 5.6 PID ATR PATHWAY ATR signaling pathway
0.4 1.1 PID P53 REGULATION PATHWAY p53 pathway
0.3 1.8 PID AP1 PATHWAY AP-1 transcription factor network
0.3 2.8 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.2 1.1 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.2 1.5 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.2 1.0 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.2 0.2 PID ARF 3PATHWAY Arf1 pathway
0.1 0.4 PID E2F PATHWAY E2F transcription factor network
0.1 0.3 PID FANCONI PATHWAY Fanconi anemia pathway
0.1 0.3 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.0 0.1 PID REG GR PATHWAY Glucocorticoid receptor regulatory network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
4.9 29.5 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.7 3.5 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.7 2.0 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.6 1.9 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.5 1.0 REACTOME REPAIR SYNTHESIS FOR GAP FILLING BY DNA POL IN TC NER Genes involved in Repair synthesis for gap-filling by DNA polymerase in TC-NER
0.4 1.7 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.4 2.5 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.4 1.7 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.4 0.8 REACTOME MITOTIC G2 G2 M PHASES Genes involved in Mitotic G2-G2/M phases
0.3 7.9 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.3 2.7 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.3 0.3 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.3 0.9 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 1.2 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.2 0.9 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.2 0.6 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.2 0.6 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.2 0.4 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.2 0.2 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.2 0.8 REACTOME ASSEMBLY OF THE PRE REPLICATIVE COMPLEX Genes involved in Assembly of the pre-replicative complex
0.2 0.5 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.2 0.5 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.1 0.8 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.6 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 1.1 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.3 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.0 0.1 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis