Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT3G56850

Z-value: 2.20

Transcription factors associated with AT3G56850

Gene Symbol Gene ID Gene Info
AT3G56850 ABA-responsive element binding protein 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AREB3arTal_v1_Chr3_-_21048614_210486140.872.2e-09Click!

Activity profile of AT3G56850 motif

Sorted Z-values of AT3G56850 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_15825566 17.32 AT5G39520.1
hypothetical protein (DUF1997)
Chr1_+_30150897 14.64 AT1G80160.3
AT1G80160.1
AT1G80160.2
Lactoylglutathione lyase / glyoxalase I family protein
Chr1_+_25765718 13.63 AT1G68620.1
alpha/beta-Hydrolases superfamily protein
Chr3_+_22935510 13.56 AT3G61930.1
hypothetical protein
Chr2_+_10906460 13.13 AT2G25625.2
histone deacetylase-like protein
Chr2_+_7845923 13.12 AT2G18050.2
AT2G18050.1
histone H1-3
Chr3_-_162905 12.88 AT3G01420.1
Peroxidase superfamily protein
Chr3_+_5234457 12.88 AT3G15500.1
NAC domain containing protein 3
Chr1_-_11668690 12.82 AT1G32350.1
AT1G32350.2
alternative oxidase 1D
Chr4_+_285876 12.77 AT4G00700.2
AT4G00700.1
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr2_+_10906215 12.71 AT2G25625.1
histone deacetylase-like protein
Chr1_-_1559917 12.35 AT1G05340.1
cysteine-rich TM module stress tolerance protein
Chr4_+_7156150 12.27 AT4G11910.1
STAY-GREEN-like protein
Chr2_+_7606728 12.07 AT2G17500.2
AT2G17500.1
AT2G17500.3
AT2G17500.4
Auxin efflux carrier family protein
Chr2_+_19375985 11.63 AT2G47190.1
myb domain protein 2
Chr1_+_10892445 11.59 AT1G30700.1
FAD-binding Berberine family protein
Chr1_+_5290747 11.54 AT1G15380.2
Lactoylglutathione lyase / glyoxalase I family protein
Chr1_+_5290582 11.27 AT1G15380.1
Lactoylglutathione lyase / glyoxalase I family protein
Chr5_-_17166032 11.25 AT5G42800.1
dihydroflavonol 4-reductase
Chr4_+_6491017 11.05 AT4G10500.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_25426234 10.88 AT1G67810.1
sulfur E2
Chr1_-_19698482 10.78 AT1G52890.1
NAC domain containing protein 19
Chr3_+_19239305 10.71 AT3G51860.1
AT3G51860.2
cation exchanger 3
Chr1_-_10356482 10.71 AT1G29640.1
senescence regulator (Protein of unknown function, DUF584)
Chr2_+_6213972 10.66 AT2G14560.2
AT2G14560.1
LURP-one-like protein (DUF567)
Chr4_-_12018492 10.54 AT4G22920.1
non-yellowing 1
Chr5_-_6042938 10.51 AT5G18270.2
AT5G18270.1
NAC domain containing protein 87
Chr4_-_12018643 10.49 AT4G22920.2
non-yellowing 1
Chr5_-_23896702 10.49 AT5G59220.2
PP2C protein (Clade A protein phosphatases type 2C)
Chr2_+_6213617 10.41 AT2G14560.3
AT2G14560.4
LURP-one-like protein (DUF567)
Chr5_-_4183354 10.38 AT5G13170.1
senescence-associated gene 29
Chr2_-_11980003 10.30 AT2G28110.1
Exostosin family protein
Chr2_-_14541617 10.29 AT2G34500.1
cytochrome P450, family 710, subfamily A, polypeptide 1
Chr5_-_23896939 10.28 AT5G59220.1
PP2C protein (Clade A protein phosphatases type 2C)
Chr2_-_14146471 10.25 AT2G33380.2
AT2G33380.1
Caleosin-related family protein
Chr3_-_1055196 10.05 AT3G04060.1
NAC domain containing protein 46
Chr3_-_1063103 9.97 AT3G04070.2
AT3G04070.1
NAC domain containing protein 47
Chr2_-_19166949 9.97 AT2G46680.2
AT2G46680.1
homeobox 7
Chr5_-_5033540 9.84 AT5G15500.2
AT5G15500.1
Ankyrin repeat family protein
Chr2_+_17251819 9.60 AT2G41380.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_25089603 9.58 AT5G62480.3
AT5G62480.2
AT5G62480.1
glutathione S-transferase tau 9
Chr1_+_5389952 9.58 AT1G15670.1
Galactose oxidase/kelch repeat superfamily protein
Chr4_+_13653579 9.54 AT4G27260.1
Auxin-responsive GH3 family protein
Chr1_+_26122080 9.44 AT1G69490.1
NAC-like, activated by AP3/PI
Chr3_+_19089026 9.32 AT3G51440.1
Calcium-dependent phosphotriesterase superfamily protein
Chr3_+_18634546 9.29 AT3G50260.1
cooperatively regulated by ethylene and jasmonate 1
Chr3_-_23150606 9.19 AT3G62590.1
alpha/beta-Hydrolases superfamily protein
Chr4_-_9368852 9.19 AT4G16640.1
Matrixin family protein
Chr1_+_26651840 9.15 AT1G70690.1
Receptor-like protein kinase-related family protein
Chr5_+_579744 9.08 AT5G02580.1
AT5G02580.3
AT5G02580.2
argininosuccinate lyase
Chr4_+_10398857 8.99 AT4G18980.1
AtS40-3
Chr2_+_18558885 8.99 AT2G44990.2
AT2G44990.3
AT2G44990.1
carotenoid cleavage dioxygenase 7
Chr2_-_16014991 8.86 AT2G38240.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_21652988 8.84 AT1G58340.1
MATE efflux family protein
Chr4_-_15941493 8.74 AT4G33040.1
Thioredoxin superfamily protein
Chr3_+_19086344 8.74 AT3G51430.1
AT3G51430.2
Calcium-dependent phosphotriesterase superfamily protein
Chr5_+_1672070 8.69 AT5G05600.1
AT5G05600.2
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_+_17579618 8.67 AT4G37390.1
Auxin-responsive GH3 family protein
Chr1_+_23072222 8.65 AT1G62370.1
RING/U-box superfamily protein
Chr4_-_15903523 8.50 AT4G32940.1
gamma vacuolar processing enzyme
Chr1_+_1469541 8.46 AT1G05100.1
mitogen-activated protein kinase kinase kinase 18
Chr5_+_2938193 8.44 AT5G09440.1
EXORDIUM like 4
Chr4_+_7304323 8.43 AT4G12290.2
Copper amine oxidase family protein
Chr4_+_7303985 8.36 AT4G12290.1
Copper amine oxidase family protein
Chr5_-_2652535 8.26 AT5G08240.1
transmembrane protein
Chr4_-_7686873 8.21 AT4G13250.2
AT4G13250.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_-_21265460 8.18 AT5G52390.1
PAR1 protein
Chr2_-_9538963 8.17 AT2G22470.1
arabinogalactan protein 2
Chr1_+_8164959 8.16 AT1G23040.3
AT1G23040.2
hydroxyproline-rich glycoprotein family protein
Chr1_-_5645443 8.00 AT1G16510.1
SAUR-like auxin-responsive protein family
Chr5_-_17994584 8.00 AT5G44610.3
AT5G44610.2
AT5G44610.1
microtubule-associated protein 18
Chr5_-_24836933 7.87 AT5G61820.1
AT5G61820.2
stress up-regulated Nod 19 protein
Chr3_-_21293158 7.86 AT3G57520.2
AT3G57520.3
AT3G57520.1
seed imbibition 2
Chr3_-_1660380 7.82 AT3G05675.3
AT3G05675.2
AT3G05675.1
BTB/POZ domain-containing protein
Chr2_+_18577500 7.79 AT2G45040.1
Matrixin family protein
Chr3_-_10047453 7.79 AT3G27210.1
hypothetical protein
Chr4_-_17571743 7.78 AT4G37370.1
cytochrome P450, family 81, subfamily D, polypeptide 8
Chr5_-_5904380 7.77 AT5G17860.2
calcium exchanger 7
Chr5_-_5904532 7.70 AT5G17860.1
calcium exchanger 7
Chr1_+_8164782 7.67 AT1G23040.1
hydroxyproline-rich glycoprotein family protein
Chr1_+_23168767 7.65 AT1G62570.1
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr4_-_12345652 7.65 AT4G23700.2
cation/H+ exchanger 17
Chr2_-_17806073 7.64 AT2G42790.1
citrate synthase 3
Chr3_-_8119490 7.63 AT3G22910.1
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr1_+_28291698 7.61 AT1G75390.1
AT1G75390.2
basic leucine-zipper 44
Chr4_+_17440177 7.59 AT4G36990.1
heat shock factor 4
Chr5_-_9716418 7.56 AT5G27520.1
peroxisomal adenine nucleotide carrier 2
Chr2_-_275002 7.54 AT2G01610.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_28318362 7.51 AT1G75450.1
AT1G75450.2
cytokinin oxidase 5
Chr4_-_12346051 7.46 AT4G23700.1
cation/H+ exchanger 17
Chr5_-_5759817 7.44 AT5G17460.3
AT5G17460.2
AT5G17460.1
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr1_-_17706460 7.41 AT1G48000.1
myb domain protein 112
Chr4_-_16102196 7.39 AT4G33467.1
AT4G33467.2
hypothetical protein
Chr3_-_7063372 7.37 AT3G20250.2
AT3G20250.1
pumilio 5
Chr2_+_12767585 7.33 AT2G29950.1
ELF4-like 1
Chr1_-_2282828 7.27 AT1G07430.1
highly ABA-induced PP2C protein 2
Chr1_-_977761 7.26 AT1G03850.1
AT1G03850.2
AT1G03850.3
Glutaredoxin family protein
Chr1_+_20617313 7.25 AT1G55265.1
DUF538 family protein, putative (Protein of unknown function, DUF538)
Chr3_+_22925742 7.23 AT3G61900.1
SAUR-like auxin-responsive protein family
Chr3_-_8036005 7.22 AT3G22740.1
homocysteine S-methyltransferase 3
Chr3_+_512220 7.20 AT3G02480.1
Late embryogenesis abundant protein (LEA) family protein
Chr2_+_17640546 7.18 AT2G42360.1
RING/U-box superfamily protein
Chr3_-_20361560 7.18 AT3G54950.1
patatin-like protein 6
Chr1_+_6515373 7.13 AT1G18870.1
AT1G18870.3
isochorismate synthase 2
Chr5_+_23584789 7.10 AT5G58350.1
with no lysine (K) kinase 4
Chr5_+_206432 7.05 AT5G01520.2
AT5G01520.1
RING/U-box superfamily protein
Chr3_+_815550 7.05 AT3G03440.1
ARM repeat superfamily protein
Chr5_-_18804056 7.05 AT5G46350.1
WRKY DNA-binding protein 8
Chr2_-_9858778 7.03 AT2G23150.1
natural resistance-associated macrophage protein 3
Chr2_-_7910040 7.02 AT2G18170.1
MAP kinase 7
Chr1_+_26038905 7.02 AT1G69260.1
ABI five binding protein
Chr1_-_7086873 7.02 AT1G20440.1
cold-regulated 47
Chr3_-_2651101 6.99 AT3G08720.4
AT3G08720.3
AT3G08720.2
AT3G08720.1
serine/threonine protein kinase 2
Chr5_+_21910471 6.99 AT5G53970.1
Tyrosine transaminase family protein
Chr3_-_350010 6.98 AT3G02040.1
senescence-related gene 3
Chr5_+_23003909 6.93 AT5G56870.1
beta-galactosidase 4
Chr2_-_6710856 6.92 AT2G15390.1
fucosyltransferase 4
Chr3_+_18919327 6.91 AT3G50910.1
netrin receptor DCC
Chr3_-_9471039 6.86 AT3G25882.1
NIM1-interacting 2
Chr2_-_6711156 6.85 AT2G15390.2
fucosyltransferase 4
Chr1_+_3945584 6.84 AT1G11700.1
senescence regulator (Protein of unknown function, DUF584)
Chr5_+_4461554 6.80 AT5G13820.2
telomeric DNA binding protein 1
Chr1_-_18124289 6.78 AT1G49000.1
transmembrane protein
Chr1_+_11774484 6.77 AT1G32560.1
Late embryogenesis abundant protein, group 1 protein
Chr3_-_7063163 6.75 AT3G20250.3
pumilio 5
Chr2_-_13929763 6.72 AT2G32830.1
phosphate transporter 1;5
Chr2_-_7256831 6.72 AT2G16720.1
myb domain protein 7
Chr1_+_28940147 6.69 AT1G77000.2
AT1G77000.3
RNI-like superfamily protein
Chr3_-_22945288 6.68 AT3G61960.2
AT3G61960.1
Protein kinase superfamily protein
Chr3_+_5243432 6.66 AT3G15510.1
NAC domain containing protein 2
Chr1_-_24362054 6.64 AT1G65520.1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr1_-_28927391 6.60 AT1G76980.2
AT1G76980.1
patatin-like phospholipase domain protein
Chr3_-_829926 6.58 AT3G03480.1
acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase
Chr2_+_13677986 6.58 AT2G32210.3
AT2G32210.2
AT2G32210.1
cysteine-rich/transmembrane domain A-like protein
Chr5_-_19299174 6.56 AT5G47590.1
AT5G47590.2
Heat shock protein HSP20/alpha crystallin family
Chr4_+_131422 6.56 AT4G00305.1
RING/U-box superfamily protein
Chr5_-_26096114 6.52 AT5G65300.1
hypothetical protein
Chr1_+_28940486 6.50 AT1G77000.4
AT1G77000.1
RNI-like superfamily protein
Chr4_-_10765781 6.49 AT4G19810.1
AT4G19810.2
Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
Chr3_-_21303230 6.47 AT3G57540.1
Remorin family protein
Chr1_+_21207537 6.47 AT1G56600.1
galactinol synthase 2
Chr2_+_11620076 6.45 AT2G27180.1
hypothetical protein
Chr5_+_4460840 6.43 AT5G13820.1
telomeric DNA binding protein 1
Chr5_+_2435983 6.41 AT5G07680.2
NAC domain containing protein 80
Chr4_+_9171280 6.41 AT4G16190.1
Papain family cysteine protease
Chr5_+_20090648 6.41 AT5G49520.1
WRKY DNA-binding protein 48
Chr1_+_22198266 6.40 AT1G60190.1
ARM repeat superfamily protein
Chr5_-_8186662 6.38 AT5G24160.2
AT5G24160.1
squalene monooxygenase 6
Chr4_-_17875201 6.38 AT4G38060.1
AT4G38060.3
AT4G38060.4
hypothetical protein
Chr1_-_23637577 6.37 AT1G63720.1
hydroxyproline-rich glycoprotein family protein
Chr2_-_16780368 6.35 AT2G40170.1
Stress induced protein
Chr5_+_1602205 6.34 AT5G05410.2
AT5G05410.1
DRE-binding protein 2A
Chr5_+_25210301 6.33 AT5G62770.1
membrane-associated kinase regulator, putative (DUF1645)
Chr3_-_11384145 6.26 AT3G29575.1
AT3G29575.4
AT3G29575.3
ABI five binding protein 3
Chr4_+_13236253 6.23 AT4G26120.2
Ankyrin repeat family protein / BTB/POZ domain-containing protein
Chr3_-_6804114 6.21 AT3G19580.2
zinc-finger protein 2
Chr5_-_315405 6.18 AT5G01820.1
serine/threonine protein kinase 1
Chr4_-_10236041 6.17 AT4G18580.2
AT4G18580.1
hypothetical protein
Chr5_-_4933620 6.17 AT5G15190.2
AT5G15190.1
hypothetical protein
Chr5_+_23928954 6.15 AT5G59320.1
lipid transfer protein 3
Chr4_+_13236448 6.13 AT4G26120.1
Ankyrin repeat family protein / BTB/POZ domain-containing protein
Chr1_+_28213666 6.12 AT1G75170.1
AT1G75170.2
AT1G75170.3
Sec14p-like phosphatidylinositol transfer family protein
Chr4_+_585598 6.12 AT4G01430.1
AT4G01430.2
AT4G01430.3
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_24485046 6.12 AT1G65820.1
AT1G65820.3
AT1G65820.2
microsomal glutathione s-transferase
Chr2_-_17170559 6.10 AT2G41190.1
AT2G41190.2
Transmembrane amino acid transporter family protein
Chr3_-_6804296 6.09 AT3G19580.1
zinc-finger protein 2
Chr2_-_852321 6.00 AT2G02930.1
glutathione S-transferase F3
Chr2_+_17639001 5.99 AT2G42350.1
RING/U-box superfamily protein
Chr5_+_2435795 5.99 AT5G07680.1
NAC domain containing protein 80
Chr1_+_6515644 5.97 AT1G18870.2
isochorismate synthase 2
Chr5_+_25908247 5.94 AT5G64810.1
WRKY DNA-binding protein 51
Chr4_-_18232011 5.93 AT4G39140.5
AT4G39140.1
AT4G39140.2
AT4G39140.4
AT4G39140.3
RING/U-box superfamily protein
Chr5_-_18506382 5.93 AT5G45630.1
senescence regulator (Protein of unknown function, DUF584)
Chr5_-_2529421 5.91 AT5G07920.1
AT5G07920.3
AT5G07920.2
diacylglycerol kinase1
Chr5_+_21945865 5.91 AT5G54080.1
AT5G54080.2
homogentisate 1,2-dioxygenase
Chr5_+_25322975 5.86 AT5G63130.2
AT5G63130.1
Octicosapeptide/Phox/Bem1p family protein
Chr2_+_10826735 5.85 AT2G25440.1
receptor like protein 20
Chr4_+_12314025 5.80 AT4G23610.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr3_+_3271217 5.79 AT3G10500.2
AT3G10500.1
NAC domain containing protein 53
Chr4_+_5244865 5.79 AT4G08300.1
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_2442570 5.78 AT1G07900.1
LOB domain-containing protein 1
Chr5_-_25764420 5.78 AT5G64430.1
Octicosapeptide/Phox/Bem1p family protein
Chr4_-_10591546 5.77 AT4G19420.3
AT4G19420.2
AT4G19420.1
Pectinacetylesterase family protein
Chr4_-_13709170 5.75 AT4G27410.2
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr5_-_8186100 5.74 AT5G24160.3
squalene monooxygenase 6
Chr5_-_22507879 5.74 AT5G55560.1
Protein kinase superfamily protein
Chr3_-_17976774 5.73 AT3G48520.1
cytochrome P450, family 94, subfamily B, polypeptide 3
Chr2_-_761013 5.73 AT2G02710.2
AT2G02710.3
AT2G02710.4
AT2G02710.1
PAS/LOV protein B
Chr5_+_26416126 5.72 AT5G66052.1
transmembrane protein
Chr2_-_8447355 5.71 AT2G19500.1
cytokinin oxidase 2
Chr2_-_9866562 5.70 AT2G23170.1
Auxin-responsive GH3 family protein
Chr5_+_15634444 5.69 AT5G39050.1
HXXXD-type acyl-transferase family protein
Chr2_-_10127589 5.68 AT2G23790.1
calcium uniporter (DUF607)
Chr5_-_4722371 5.67 AT5G14640.1
shaggy-like kinase 13
Chr2_+_15514923 5.66 AT2G36950.1
Heavy metal transport/detoxification superfamily protein
Chr2_+_18698592 5.65 AT2G45360.1
ankyrin repeat/KH domain protein (DUF1442)
Chr3_+_5796930 5.64 AT3G17000.1
ubiquitin-conjugating enzyme 32
Chr3_+_23295285 5.63 AT3G63030.1
methyl-CPG-binding domain 4
Chr5_+_21386727 5.63 AT5G52760.1
AT5G52760.2
Copper transport protein family
Chr2_-_12938834 5.62 AT2G30360.1
SOS3-interacting protein 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G56850

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
6.6 26.4 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
5.6 33.9 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
4.2 12.5 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
3.6 18.1 GO:0009413 response to flooding(GO:0009413)
3.5 14.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
3.1 12.3 GO:0006554 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
3.0 27.4 GO:0010230 alternative respiration(GO:0010230)
3.0 12.1 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
3.0 9.0 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
2.7 10.7 GO:0010351 lithium ion transport(GO:0010351)
2.7 8.0 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
2.6 7.9 GO:0033530 raffinose metabolic process(GO:0033530)
2.6 12.9 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
2.5 22.6 GO:0009819 drought recovery(GO:0009819)
2.4 7.2 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
2.3 9.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
2.2 8.9 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
2.2 6.6 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
2.0 10.1 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
1.9 7.6 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
1.9 11.4 GO:1902884 positive regulation of response to oxidative stress(GO:1902884)
1.9 13.2 GO:1901332 negative regulation of lateral root development(GO:1901332)
1.9 24.4 GO:0015996 chlorophyll catabolic process(GO:0015996)
1.8 11.1 GO:0006624 vacuolar protein processing(GO:0006624)
1.8 7.3 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438) negative regulation of seed maturation(GO:2000692)
1.8 17.7 GO:0016584 nucleosome positioning(GO:0016584)
1.8 7.0 GO:0015692 lead ion transport(GO:0015692)
1.7 5.2 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
1.6 4.7 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
1.5 10.8 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
1.5 7.6 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
1.5 5.9 GO:0070509 calcium ion import(GO:0070509)
1.4 4.3 GO:0019859 thymine catabolic process(GO:0006210) thymine metabolic process(GO:0019859)
1.4 1.4 GO:0071280 cellular response to copper ion(GO:0071280)
1.3 3.9 GO:0080168 abscisic acid transport(GO:0080168)
1.2 6.2 GO:1900367 positive regulation of defense response to insect(GO:1900367)
1.2 7.3 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
1.2 6.0 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
1.2 4.7 GO:0048480 stigma development(GO:0048480)
1.2 5.9 GO:0019323 pentose catabolic process(GO:0019323)
1.2 4.6 GO:0042256 mature ribosome assembly(GO:0042256)
1.1 3.4 GO:0010731 protein glutathionylation(GO:0010731)
1.1 3.4 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
1.1 6.7 GO:0043617 cellular response to sucrose starvation(GO:0043617)
1.1 5.5 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
1.1 5.5 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
1.1 2.2 GO:0046365 monosaccharide catabolic process(GO:0046365)
1.1 9.8 GO:0051410 detoxification of nitrogen compound(GO:0051410)
1.1 18.3 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
1.1 3.2 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
1.1 4.2 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
1.0 5.2 GO:0006531 2-oxoglutarate metabolic process(GO:0006103) aspartate metabolic process(GO:0006531)
1.0 3.1 GO:0046203 spermidine catabolic process(GO:0046203)
1.0 1.0 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
1.0 6.1 GO:0043407 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
1.0 7.0 GO:1901002 positive regulation of response to salt stress(GO:1901002)
1.0 4.8 GO:0010336 gibberellic acid homeostasis(GO:0010336)
1.0 15.2 GO:0045995 regulation of embryonic development(GO:0045995)
0.9 2.8 GO:0019482 beta-alanine metabolic process(GO:0019482)
0.9 7.2 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.9 11.6 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.9 8.7 GO:0042360 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.9 2.6 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.9 4.3 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.9 5.1 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.9 5.1 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.8 2.5 GO:1904062 positive regulation of ion transmembrane transport(GO:0034767) positive regulation of potassium ion transport(GO:0043268) regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.8 38.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.8 3.3 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.8 13.2 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.8 4.0 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.8 2.4 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.8 7.3 GO:0080183 response to photooxidative stress(GO:0080183)
0.8 5.6 GO:0070828 heterochromatin organization(GO:0070828)
0.8 39.4 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.8 5.5 GO:0010148 transpiration(GO:0010148)
0.8 8.3 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.7 5.9 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.7 5.1 GO:0072329 monocarboxylic acid catabolic process(GO:0072329)
0.7 2.9 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.7 4.9 GO:0009068 aspartate family amino acid catabolic process(GO:0009068)
0.7 11.2 GO:0015770 sucrose transport(GO:0015770)
0.7 21.6 GO:0006012 galactose metabolic process(GO:0006012)
0.7 6.8 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.7 1.4 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.7 6.8 GO:0009942 longitudinal axis specification(GO:0009942)
0.7 4.0 GO:0006552 leucine catabolic process(GO:0006552)
0.7 2.7 GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.7 10.0 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.7 2.0 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.7 4.0 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.7 3.3 GO:0070861 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.7 3.3 GO:0008608 attachment of spindle microtubules to kinetochore(GO:0008608)
0.6 23.2 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.6 3.2 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677) regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.6 1.9 GO:0017145 stem cell division(GO:0017145)
0.6 3.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.6 15.6 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.6 1.9 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.6 3.7 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.6 1.2 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.6 1.8 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.6 3.0 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.6 2.9 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.6 9.4 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.6 2.3 GO:0006501 C-terminal protein lipidation(GO:0006501) C-terminal protein amino acid modification(GO:0018410)
0.6 10.4 GO:0019374 galactolipid metabolic process(GO:0019374)
0.6 1.7 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.6 5.1 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.6 1.7 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.6 12.1 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.5 5.5 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.5 7.0 GO:1902074 response to salt(GO:1902074)
0.5 3.8 GO:0060866 leaf abscission(GO:0060866)
0.5 3.2 GO:1990019 protein storage vacuole organization(GO:1990019)
0.5 2.1 GO:1902533 regulation of nitrogen utilization(GO:0006808) positive regulation of intracellular signal transduction(GO:1902533)
0.5 2.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.5 0.5 GO:1900034 regulation of cellular response to heat(GO:1900034)
0.5 3.9 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.5 1.5 GO:0010136 ureide metabolic process(GO:0010135) ureide catabolic process(GO:0010136)
0.5 1.5 GO:0016540 protein autoprocessing(GO:0016540)
0.5 2.4 GO:0009590 detection of gravity(GO:0009590)
0.5 33.8 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.5 5.8 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.5 1.4 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.5 1.9 GO:0072337 modified amino acid transport(GO:0072337)
0.5 3.8 GO:0042659 regulation of cell fate specification(GO:0042659)
0.5 1.9 GO:0016578 histone deubiquitination(GO:0016578)
0.5 1.9 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.5 2.8 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.5 6.0 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.5 17.9 GO:0006623 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.5 3.6 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.5 3.2 GO:0009610 response to symbiotic fungus(GO:0009610)
0.4 2.7 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.4 11.4 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.4 4.8 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.4 20.3 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.4 6.5 GO:0006026 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.4 1.3 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.4 10.5 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.4 24.4 GO:0009631 cold acclimation(GO:0009631)
0.4 4.2 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.4 3.3 GO:0044375 regulation of peroxisome size(GO:0044375)
0.4 9.6 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.4 3.7 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.4 1.2 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.4 2.1 GO:0080119 ER body organization(GO:0080119)
0.4 6.0 GO:0006826 iron ion transport(GO:0006826)
0.4 10.8 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.4 1.2 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.4 13.5 GO:1901421 positive regulation of response to alcohol(GO:1901421)
0.4 3.6 GO:0080144 amino acid homeostasis(GO:0080144)
0.4 1.2 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.4 0.8 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.4 1.9 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.4 3.5 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.4 3.4 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.4 2.3 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.4 2.3 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.4 15.1 GO:0002239 response to oomycetes(GO:0002239)
0.4 1.9 GO:0060919 auxin influx(GO:0060919)
0.4 3.4 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.4 1.8 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.4 6.9 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.4 14.0 GO:0032200 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.4 1.4 GO:0006097 glyoxylate cycle(GO:0006097) glyoxylate metabolic process(GO:0046487)
0.4 0.7 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.4 21.8 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.4 3.2 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.4 1.8 GO:0009268 response to pH(GO:0009268)
0.4 1.8 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.4 1.4 GO:0050792 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.3 2.8 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.3 1.7 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.3 1.0 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.3 1.0 GO:0043545 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.3 1.0 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.3 3.7 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.3 2.7 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.3 1.0 GO:0043171 peptide catabolic process(GO:0043171)
0.3 19.9 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.3 3.3 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.3 3.2 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.3 5.1 GO:0010093 specification of floral organ identity(GO:0010093)
0.3 4.5 GO:0034620 cellular response to unfolded protein(GO:0034620)
0.3 46.3 GO:0009751 response to salicylic acid(GO:0009751)
0.3 1.6 GO:0051601 exocyst localization(GO:0051601)
0.3 2.8 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.3 1.5 GO:0009957 epidermal cell fate specification(GO:0009957)
0.3 2.4 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.3 1.5 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.3 11.8 GO:0042594 response to starvation(GO:0042594)
0.3 2.3 GO:0098581 detection of biotic stimulus(GO:0009595) detection of bacterium(GO:0016045) detection of other organism(GO:0098543) detection of external biotic stimulus(GO:0098581)
0.3 4.4 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.3 3.4 GO:0080112 seed growth(GO:0080112) regulation of seed growth(GO:0080113)
0.3 1.1 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.3 1.7 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.3 2.0 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000479)
0.3 53.2 GO:0071456 cellular response to hypoxia(GO:0071456)
0.3 3.3 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.3 1.6 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.3 1.4 GO:0019419 sulfate reduction(GO:0019419)
0.3 0.3 GO:0071481 cellular response to X-ray(GO:0071481)
0.3 2.1 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.3 1.3 GO:0048455 stamen formation(GO:0048455)
0.3 3.7 GO:0010048 vernalization response(GO:0010048)
0.3 11.0 GO:0006338 chromatin remodeling(GO:0006338)
0.3 6.5 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.3 1.0 GO:0006680 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.3 1.3 GO:1903963 long-chain fatty acid transport(GO:0015909) icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.3 1.0 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.2 0.2 GO:0031023 microtubule organizing center organization(GO:0031023)
0.2 0.7 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.2 1.2 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.2 6.0 GO:0010252 auxin homeostasis(GO:0010252)
0.2 3.6 GO:0006814 sodium ion transport(GO:0006814)
0.2 22.7 GO:0007568 aging(GO:0007568)
0.2 1.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.2 1.8 GO:0051262 protein tetramerization(GO:0051262)
0.2 1.5 GO:0000055 ribosomal large subunit export from nucleus(GO:0000055)
0.2 4.5 GO:0006298 mismatch repair(GO:0006298)
0.2 7.2 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.2 1.3 GO:0050821 protein stabilization(GO:0050821)
0.2 5.6 GO:0007030 Golgi organization(GO:0007030)
0.2 1.2 GO:0043102 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.2 2.8 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.2 11.2 GO:0010431 seed maturation(GO:0010431)
0.2 4.1 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.2 6.0 GO:0010029 regulation of seed germination(GO:0010029)
0.2 1.7 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.2 1.9 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.2 1.1 GO:0048446 petal morphogenesis(GO:0048446)
0.2 2.8 GO:0010030 positive regulation of seed germination(GO:0010030)
0.2 4.2 GO:0043067 regulation of programmed cell death(GO:0043067)
0.2 7.2 GO:0006749 glutathione metabolic process(GO:0006749)
0.2 12.5 GO:0009738 abscisic acid-activated signaling pathway(GO:0009738)
0.2 2.0 GO:0010262 somatic embryogenesis(GO:0010262)
0.2 6.4 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.2 5.3 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.2 0.7 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.2 1.2 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.2 15.9 GO:0010200 response to chitin(GO:0010200)
0.2 4.0 GO:0009625 response to insect(GO:0009625)
0.2 2.6 GO:0070417 cellular response to cold(GO:0070417)
0.2 4.5 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.2 2.7 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.2 3.6 GO:0016482 cytosolic transport(GO:0016482)
0.2 3.0 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.2 5.1 GO:0006354 DNA-templated transcription, elongation(GO:0006354)
0.2 0.5 GO:0007019 microtubule depolymerization(GO:0007019)
0.2 11.3 GO:0016579 protein deubiquitination(GO:0016579)
0.1 0.7 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 3.1 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.1 1.0 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.1 1.0 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 1.1 GO:0009560 embryo sac egg cell differentiation(GO:0009560)
0.1 0.7 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 2.2 GO:0070646 protein modification by small protein removal(GO:0070646)
0.1 1.5 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 1.2 GO:0033753 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.1 0.8 GO:0010044 response to aluminum ion(GO:0010044)
0.1 1.7 GO:0043248 proteasome assembly(GO:0043248)
0.1 0.4 GO:0070206 protein trimerization(GO:0070206) protein homotrimerization(GO:0070207)
0.1 1.9 GO:0033962 cytoplasmic mRNA processing body assembly(GO:0033962)
0.1 1.1 GO:0010161 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.1 1.9 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.1 21.0 GO:0051603 proteolysis involved in cellular protein catabolic process(GO:0051603)
0.1 0.6 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.1 1.7 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 14.2 GO:0006457 protein folding(GO:0006457)
0.1 1.1 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.1 6.3 GO:0055046 microgametogenesis(GO:0055046)
0.1 2.1 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.1 1.4 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 48.5 GO:0016567 protein ubiquitination(GO:0016567)
0.1 3.6 GO:0051170 nuclear import(GO:0051170)
0.1 1.8 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.1 0.8 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.1 1.8 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.1 0.6 GO:0031935 regulation of chromatin silencing(GO:0031935)
0.1 1.5 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.1 4.2 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.1 1.4 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 1.3 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 2.0 GO:0009867 jasmonic acid mediated signaling pathway(GO:0009867) cellular response to jasmonic acid stimulus(GO:0071395)
0.1 1.1 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.1 2.2 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.1 1.1 GO:0031348 negative regulation of defense response(GO:0031348)
0.1 10.5 GO:0006470 protein dephosphorylation(GO:0006470)
0.1 0.6 GO:0051782 negative regulation of cell division(GO:0051782)
0.1 2.3 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.1 0.3 GO:0006290 photoreactive repair(GO:0000719) pyrimidine dimer repair(GO:0006290)
0.1 0.1 GO:1901562 response to paraquat(GO:1901562)
0.1 9.9 GO:0046777 protein autophosphorylation(GO:0046777)
0.1 0.9 GO:0007031 peroxisome organization(GO:0007031)
0.1 1.4 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.1 1.0 GO:0016075 rRNA catabolic process(GO:0016075) RNA surveillance(GO:0071025)
0.1 0.2 GO:0010338 leaf formation(GO:0010338)
0.1 0.2 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.0 0.4 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 1.0 GO:0010286 heat acclimation(GO:0010286)
0.0 0.1 GO:0015868 purine ribonucleotide transport(GO:0015868)
0.0 0.4 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.5 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.0 0.5 GO:0032366 intracellular sterol transport(GO:0032366)
0.0 0.8 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 1.4 GO:0018393 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.5 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.4 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.6 GO:0097031 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.4 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.6 GO:0030163 protein catabolic process(GO:0030163)
0.0 0.1 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.2 GO:0005513 detection of calcium ion(GO:0005513)
0.0 1.8 GO:0016311 dephosphorylation(GO:0016311)
0.0 0.3 GO:0046653 tetrahydrofolate metabolic process(GO:0046653)
0.0 0.8 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.6 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 0.3 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.4 GO:0010256 endomembrane system organization(GO:0010256)
0.0 0.1 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.0 GO:0045833 negative regulation of lipid metabolic process(GO:0045833) negative regulation of lipid biosynthetic process(GO:0051055)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
2.3 14.0 GO:0005776 autophagosome(GO:0005776)
2.0 5.9 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
1.6 6.5 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
1.6 11.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
1.5 23.1 GO:0005801 cis-Golgi network(GO:0005801)
1.4 12.3 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
1.3 14.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
1.2 4.7 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
1.1 20.2 GO:0016602 CCAAT-binding factor complex(GO:0016602)
1.0 5.2 GO:0035861 site of double-strand break(GO:0035861)
1.0 16.5 GO:0000786 nucleosome(GO:0000786)
1.0 8.8 GO:0017119 Golgi transport complex(GO:0017119)
1.0 10.5 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
1.0 14.3 GO:0031970 organelle envelope lumen(GO:0031970)
0.9 13.4 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.9 4.3 GO:0034657 GID complex(GO:0034657)
0.9 16.3 GO:0031965 nuclear membrane(GO:0031965)
0.8 19.5 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.8 2.3 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.7 5.1 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.7 9.3 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.7 46.4 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.7 5.4 GO:0030127 COPII vesicle coat(GO:0030127)
0.6 3.7 GO:0045240 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062) dihydrolipoyl dehydrogenase complex(GO:0045240)
0.6 15.1 GO:0000781 chromosome, telomeric region(GO:0000781)
0.6 12.5 GO:0031012 extracellular matrix(GO:0031012)
0.6 5.3 GO:0000813 ESCRT I complex(GO:0000813)
0.6 3.5 GO:0017053 transcriptional repressor complex(GO:0017053)
0.6 3.4 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.5 7.5 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.5 5.4 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.5 4.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.4 6.3 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.4 3.5 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.4 1.3 GO:0030874 nucleolar chromatin(GO:0030874)
0.4 1.7 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.4 9.8 GO:0035097 histone methyltransferase complex(GO:0035097)
0.4 14.8 GO:0000137 Golgi cis cisterna(GO:0000137)
0.4 6.7 GO:0005769 early endosome(GO:0005769)
0.4 6.6 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.4 1.6 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.4 1.5 GO:0031357 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.4 1.8 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.4 1.8 GO:0005719 nuclear euchromatin(GO:0005719)
0.4 6.9 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.3 3.3 GO:0012507 ER to Golgi transport vesicle membrane(GO:0012507)
0.3 1.6 GO:0000938 GARP complex(GO:0000938)
0.3 1.9 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.3 5.6 GO:0000792 heterochromatin(GO:0000792)
0.3 7.6 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.3 1.9 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.3 3.2 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.3 12.8 GO:0005770 late endosome(GO:0005770)
0.2 1.7 GO:0005662 DNA replication factor A complex(GO:0005662)
0.2 1.4 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.2 2.7 GO:0030131 clathrin adaptor complex(GO:0030131)
0.2 9.8 GO:0016592 mediator complex(GO:0016592)
0.2 4.9 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.2 1.9 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.2 7.0 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.2 3.3 GO:0072686 mitotic spindle(GO:0072686)
0.2 1.0 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.2 3.4 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.2 6.8 GO:0005764 lysosome(GO:0005764)
0.2 15.9 GO:0000139 Golgi membrane(GO:0000139)
0.2 1.9 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.2 0.6 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.2 0.8 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.2 3.3 GO:0044438 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) microbody part(GO:0044438) peroxisomal part(GO:0044439)
0.1 0.8 GO:0070652 HAUS complex(GO:0070652)
0.1 1.7 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.1 1.2 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 1.3 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 0.3 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 11.1 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.1 1.0 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 1.4 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 0.5 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 11.0 GO:0000785 chromatin(GO:0000785)
0.1 14.3 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.1 4.1 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 6.6 GO:0005759 mitochondrial matrix(GO:0005759)
0.1 19.9 GO:0016021 integral component of membrane(GO:0016021)
0.1 6.2 GO:0044217 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.1 1.5 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 6.5 GO:0099503 secretory vesicle(GO:0099503)
0.1 15.9 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.4 GO:0000439 core TFIIH complex(GO:0000439)
0.0 1.2 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 1.1 GO:0009504 cell plate(GO:0009504)
0.0 1.5 GO:0000145 exocyst(GO:0000145)
0.0 1.2 GO:0005686 U2 snRNP(GO:0005686)
0.0 3.9 GO:0005667 transcription factor complex(GO:0005667)
0.0 0.3 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.2 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 338.8 GO:0005634 nucleus(GO:0005634)
0.0 0.3 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.0 4.4 GO:0005768 endosome(GO:0005768)
0.0 0.6 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.5 GO:0005741 mitochondrial outer membrane(GO:0005741)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
4.4 13.1 GO:0008909 isochorismate synthase activity(GO:0008909)
4.0 28.2 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
3.9 15.5 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
3.4 27.4 GO:0009916 alternative oxidase activity(GO:0009916)
3.1 12.3 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
3.0 8.9 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
2.6 7.9 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
2.4 7.2 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
2.4 16.5 GO:0031492 nucleosomal DNA binding(GO:0031492)
2.3 11.7 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
2.3 9.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
2.2 15.7 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
2.0 14.1 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
2.0 5.9 GO:0015292 uniporter activity(GO:0015292)
2.0 5.9 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
1.9 11.6 GO:0030527 structural constituent of chromatin(GO:0030527)
1.9 5.7 GO:0050736 O-malonyltransferase activity(GO:0050736)
1.8 7.3 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
1.8 10.7 GO:0015368 calcium:cation antiporter activity(GO:0015368) calcium:proton antiporter activity(GO:0015369)
1.7 5.2 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
1.7 6.6 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
1.6 9.8 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
1.5 7.6 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
1.5 12.0 GO:0004506 squalene monooxygenase activity(GO:0004506)
1.5 10.3 GO:1990137 plant seed peroxidase activity(GO:1990137)
1.4 12.9 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
1.4 14.1 GO:0004602 glutathione peroxidase activity(GO:0004602)
1.4 5.5 GO:0019172 glyoxalase III activity(GO:0019172)
1.4 10.8 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
1.3 5.3 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
1.3 3.9 GO:0031071 cysteine desulfurase activity(GO:0031071)
1.3 3.8 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
1.2 5.0 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
1.2 3.7 GO:0008481 sphinganine kinase activity(GO:0008481)
1.2 4.9 GO:0008301 DNA binding, bending(GO:0008301)
1.2 13.0 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
1.2 19.9 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
1.2 7.0 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
1.2 3.5 GO:0001054 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
1.1 5.5 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
1.1 3.3 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
1.1 3.2 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
1.0 7.3 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
1.0 3.1 GO:0004651 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192) polynucleotide phosphatase activity(GO:0098518)
1.0 3.1 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
1.0 4.1 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.9 12.1 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.9 6.5 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.9 3.6 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.9 2.7 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.9 5.3 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.9 2.6 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.9 2.6 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.9 3.5 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.9 6.1 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.9 2.6 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.8 2.5 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.8 3.3 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.8 4.2 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.8 9.1 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.8 1.6 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.8 3.2 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.8 8.8 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.8 8.7 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.8 10.3 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.8 14.2 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.8 2.3 GO:0005046 KDEL sequence binding(GO:0005046)
0.8 3.1 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.8 3.1 GO:0030523 dihydrolipoamide S-acyltransferase activity(GO:0030523)
0.7 10.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.7 5.9 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.7 16.9 GO:0097602 cullin family protein binding(GO:0097602)
0.7 3.7 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.7 3.6 GO:0032452 histone demethylase activity(GO:0032452)
0.7 4.2 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.7 2.7 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.7 12.8 GO:0016844 strictosidine synthase activity(GO:0016844)
0.7 8.0 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.7 9.4 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.7 2.7 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.7 5.2 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.7 2.0 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.6 8.4 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.6 1.9 GO:0008517 folic acid transporter activity(GO:0008517)
0.6 11.2 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.6 2.5 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.6 10.4 GO:0016157 sucrose synthase activity(GO:0016157)
0.6 9.2 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.6 10.1 GO:0015217 ADP transmembrane transporter activity(GO:0015217)
0.6 12.4 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.6 2.9 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.6 3.3 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.5 2.2 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.5 5.9 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.5 2.1 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.5 6.9 GO:0004017 adenylate kinase activity(GO:0004017)
0.5 60.2 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.5 8.2 GO:0016018 cyclosporin A binding(GO:0016018)
0.5 3.0 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.5 11.3 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.5 5.2 GO:0035514 DNA demethylase activity(GO:0035514) cytosine C-5 DNA demethylase activity(GO:0051747)
0.5 1.9 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.5 2.3 GO:0030371 translation repressor activity(GO:0030371)
0.5 8.8 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.5 1.8 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.4 3.6 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.4 8.2 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.4 1.7 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.4 2.1 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.4 2.9 GO:0080115 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.4 1.6 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.4 2.8 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.4 4.8 GO:0008061 chitin binding(GO:0008061)
0.4 2.0 GO:0034511 U3 snoRNA binding(GO:0034511)
0.4 1.6 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.4 2.7 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.4 2.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.4 4.5 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.4 1.5 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.4 7.0 GO:0015248 sterol transporter activity(GO:0015248)
0.4 1.8 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.4 7.0 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.4 3.3 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.4 6.9 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.4 1.4 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.4 1.8 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.4 2.1 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.3 24.4 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.3 6.9 GO:0051787 misfolded protein binding(GO:0051787)
0.3 1.4 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.3 43.9 GO:0046982 protein heterodimerization activity(GO:0046982)
0.3 12.9 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.3 1.0 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.3 2.3 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.3 13.5 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.3 1.0 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.3 21.9 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.3 1.6 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.3 4.0 GO:0016208 AMP binding(GO:0016208)
0.3 2.1 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.3 1.2 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.3 44.1 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.3 2.9 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.3 5.6 GO:0019902 phosphatase binding(GO:0019902)
0.3 7.5 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.3 11.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.3 0.8 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.3 2.7 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.3 6.0 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.3 64.2 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.3 1.0 GO:0004348 glucosylceramidase activity(GO:0004348)
0.2 9.7 GO:0004702 receptor signaling protein serine/threonine kinase activity(GO:0004702) MAP kinase activity(GO:0004707)
0.2 1.7 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.2 1.7 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.2 6.9 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.2 1.5 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.2 2.9 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.2 3.6 GO:0031491 nucleosome binding(GO:0031491)
0.2 1.2 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.2 11.8 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.2 1.9 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.2 3.2 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.2 2.9 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.2 1.4 GO:0001653 peptide receptor activity(GO:0001653)
0.2 6.4 GO:0048029 monosaccharide binding(GO:0048029)
0.2 2.2 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.2 4.1 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.2 0.6 GO:0017022 myosin binding(GO:0017022)
0.2 1.9 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.2 2.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.2 2.0 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.2 1.3 GO:0004623 phospholipase A2 activity(GO:0004623)
0.2 0.5 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.2 1.1 GO:0019904 protein domain specific binding(GO:0019904)
0.2 7.0 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.2 1.6 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.2 2.6 GO:0051879 Hsp90 protein binding(GO:0051879)
0.2 1.5 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.2 0.9 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.2 1.0 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 5.3 GO:0003684 damaged DNA binding(GO:0003684)
0.2 2.1 GO:0017025 TBP-class protein binding(GO:0017025)
0.2 1.1 GO:0017070 U6 snRNA binding(GO:0017070)
0.2 8.7 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.2 1.7 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 1.6 GO:0019905 syntaxin binding(GO:0019905)
0.1 29.9 GO:0005516 calmodulin binding(GO:0005516)
0.1 0.7 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 12.3 GO:0051082 unfolded protein binding(GO:0051082)
0.1 2.2 GO:0030515 snoRNA binding(GO:0030515)
0.1 3.5 GO:0015925 galactosidase activity(GO:0015925)
0.1 7.3 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 1.0 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 1.5 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.1 1.4 GO:0005484 SNAP receptor activity(GO:0005484)
0.1 1.1 GO:0045182 translation activator activity(GO:0008494) translation regulator activity(GO:0045182) translation regulator activity, nucleic acid binding(GO:0090079) mitochondrial ribosome binding(GO:0097177)
0.1 0.4 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.1 1.9 GO:0015179 L-amino acid transmembrane transporter activity(GO:0015179)
0.1 5.4 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 1.5 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 3.8 GO:0015036 disulfide oxidoreductase activity(GO:0015036)
0.1 1.2 GO:0035198 miRNA binding(GO:0035198)
0.1 0.2 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.1 2.7 GO:0031386 protein tag(GO:0031386)
0.1 0.8 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.3 GO:0004776 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 0.8 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.1 1.8 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.1 3.2 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.1 1.3 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.1 0.8 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 2.7 GO:0061733 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.1 5.7 GO:0016298 lipase activity(GO:0016298)
0.1 1.2 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.1 0.4 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 58.9 GO:0000976 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.1 6.2 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 9.1 GO:0008047 enzyme activator activity(GO:0008047)
0.1 0.3 GO:0035671 enone reductase activity(GO:0035671)
0.1 1.0 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.1 1.4 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 3.6 GO:0042393 histone binding(GO:0042393)
0.1 0.4 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.5 GO:0019144 ADP-sugar diphosphatase activity(GO:0019144) ADP-ribose pyrophosphohydrolase activity(GO:0080041)
0.1 79.0 GO:0003700 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.1 0.7 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 9.5 GO:0032561 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.1 4.8 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.1 0.3 GO:0035312 5'-3' exoribonuclease activity(GO:0004534) 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.1 0.3 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 0.6 GO:0008536 Ran GTPase binding(GO:0008536)
0.1 0.5 GO:0016161 beta-amylase activity(GO:0016161)
0.1 1.1 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 1.4 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.2 GO:0000035 acyl binding(GO:0000035)
0.1 0.1 GO:0004471 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.0 2.0 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 2.3 GO:0008483 transaminase activity(GO:0008483)
0.0 0.1 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.6 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 2.7 GO:0019900 kinase binding(GO:0019900)
0.0 6.4 GO:0043531 ADP binding(GO:0043531)
0.0 1.7 GO:0000149 SNARE binding(GO:0000149)
0.0 0.5 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 0.2 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 1.5 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.3 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.2 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.1 GO:0003785 actin monomer binding(GO:0003785)
0.0 1.3 GO:0005543 phospholipid binding(GO:0005543)
0.0 0.1 GO:0004046 aminoacylase activity(GO:0004046)
0.0 0.2 GO:0030276 clathrin binding(GO:0030276)
0.0 0.1 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 1.4 GO:0003779 actin binding(GO:0003779)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 4.6 PID IL12 2PATHWAY IL12-mediated signaling events
0.9 5.5 PID PLK1 PATHWAY PLK1 signaling events
0.5 1.5 PID PI3KCI PATHWAY Class I PI3K signaling events
0.5 5.0 PID RAC1 PATHWAY RAC1 signaling pathway
0.4 2.9 PID MTOR 4PATHWAY mTOR signaling pathway
0.4 2.2 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.3 1.0 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 1.0 PID CMYB PATHWAY C-MYB transcription factor network
0.1 1.1 PID ATR PATHWAY ATR signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 4.3 REACTOME APOPTOTIC EXECUTION PHASE Genes involved in Apoptotic execution phase
1.2 3.7 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
1.1 6.6 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.9 2.8 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.9 2.7 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.8 2.5 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.8 5.6 REACTOME BASE EXCISION REPAIR Genes involved in Base Excision Repair
0.7 2.2 REACTOME APOPTOSIS Genes involved in Apoptosis
0.7 3.9 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.6 0.6 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.6 6.6 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.4 1.3 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.4 2.6 REACTOME TRANSCRIPTION COUPLED NER TC NER Genes involved in Transcription-coupled NER (TC-NER)
0.3 1.0 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.2 1.5 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.1 0.5 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.1 0.1 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 2.2 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.5 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex