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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G55370

Z-value: 0.61

Transcription factors associated with AT3G55370

Gene Symbol Gene ID Gene Info
AT3G55370
AT3G55370 OBF-binding protein 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
OBP3arTal_v1_Chr3_+_20527063_205270630.077.4e-01Click!

Activity profile of AT3G55370 motif

Sorted Z-values of AT3G55370 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_16950705 1.40 AT2G40610.1
EXPA8
expansin A8
Chr2_-_4312103 1.23 AT2G10940.2
AT2G10940.1
AT2G10940
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_9072708 1.21 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
Chr1_-_24606722 1.14 AT1G66100.1
AT1G66100
Plant thionin
Chr1_+_28053030 1.11 AT1G74670.1
GASA6
Gibberellin-regulated family protein
Chr1_-_29635931 0.97 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr5_-_9082384 0.97 AT5G26000.1
AT5G26000.2
TGG1
thioglucoside glucohydrolase 1
Chr5_+_625254 0.96 AT5G02760.1
AT5G02760
Protein phosphatase 2C family protein
Chr3_-_21523375 0.95 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein
Chr5_-_25343369 0.94 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
Chr4_-_17777445 0.94 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr3_-_16448844 0.92 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr3_-_197974 0.91 AT3G01500.1
CA1
carbonic anhydrase 1
Chr3_-_198160 0.91 AT3G01500.2
CA1
carbonic anhydrase 1
Chr3_-_198664 0.90 AT3G01500.3
CA1
carbonic anhydrase 1
Chr2_+_2763449 0.90 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr1_+_26141726 0.86 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr3_-_197564 0.86 AT3G01500.4
CA1
carbonic anhydrase 1
Chr1_+_20447157 0.85 AT1G54820.1
AT1G54820.2
AT1G54820.3
AT1G54820.4
AT1G54820
Protein kinase superfamily protein
Chr2_-_15474717 0.85 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
Chr2_-_11727654 0.81 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
Chr5_+_17760865 0.81 AT5G44130.1
FLA13
FASCICLIN-like arabinogalactan protein 13 precursor
Chr1_+_10371675 0.77 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_16130290 0.77 AT2G38540.1
LP1
lipid transfer protein 1
Chr5_-_8707885 0.76 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
Chr1_+_27338034 0.75 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr5_+_3889906 0.75 AT5G12050.1
AT5G12050
rho GTPase-activating protein
Chr4_+_17243583 0.72 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr1_-_20648891 0.71 AT1G55330.1
AGP21
arabinogalactan protein 21
Chr4_-_12772438 0.71 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr5_-_18026077 0.69 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr3_-_7557969 0.67 AT3G21460.1
AT3G21460
Glutaredoxin family protein
Chr5_-_19648362 0.67 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_18634041 0.67 AT5G45950.1
AT5G45950
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_26711462 0.67 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
Chr5_-_8338032 0.66 AT5G24420.1
PGL5
6-phosphogluconolactonase 5
Chr1_-_4265156 0.65 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr5_+_4757856 0.65 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr1_-_28603932 0.65 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr3_-_19542160 0.65 AT3G52720.3
AT3G52720.1
ACA1
alpha carbonic anhydrase 1
Chr2_+_8940833 0.65 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr4_-_7545326 0.65 AT4G12880.2
ENODL19
early nodulin-like protein 19
Chr2_-_19617681 0.65 AT2G47930.1
AGP26
arabinogalactan protein 26
Chr3_-_19541284 0.64 AT3G52720.4
AT3G52720.2
ACA1
alpha carbonic anhydrase 1
Chr5_+_4758921 0.64 AT5G14740.9
CA2
carbonic anhydrase 2
Chr3_-_23261927 0.64 AT3G62930.1
AT3G62930
Thioredoxin superfamily protein
Chr2_+_13647699 0.61 AT2G32100.1
OFP16
ovate family protein 16
Chr3_+_5466246 0.61 AT3G16130.1
ROPGEF13
RHO guanyl-nucleotide exchange factor 13
Chr2_+_13940187 0.60 AT2G32860.2
AT2G32860.1
BGLU33
beta glucosidase 33
Chr3_-_7187521 0.59 AT3G20570.1
ENODL9
early nodulin-like protein 9
Chr5_-_20712386 0.59 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_+_9524590 0.59 AT3G26060.1
AT3G26060.2
PRXQ
Thioredoxin superfamily protein
Chr5_-_4171954 0.58 AT5G13140.1
AT5G13140
Pollen Ole e 1 allergen and extensin family protein
Chr5_-_5072492 0.58 AT5G15580.1
LNG1
longifolia1
Chr4_-_7545512 0.58 AT4G12880.1
ENODL19
early nodulin-like protein 19
Chr5_+_21582614 0.58 AT5G53200.1
TRY
Homeodomain-like superfamily protein
Chr4_+_6327917 0.58 AT4G10150.1
AT4G10150
RING/U-box superfamily protein
Chr5_+_5237970 0.58 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
Chr5_+_5078200 0.57 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr1_-_15607966 0.57 AT1G41830.1
SKS6
SKU5-similar 6
Chr1_+_26964087 0.56 AT1G71695.1
AT1G71695
Peroxidase superfamily protein
Chr2_+_19145218 0.56 AT2G46630.1
AT2G46630
serine/arginine repetitive matrix protein
Chr1_+_29413874 0.56 AT1G78170.1
AT1G78170
E3 ubiquitin-protein ligase
Chr1_-_28419635 0.56 AT1G75680.1
GH9B7
glycosyl hydrolase 9B7
Chr1_+_25574381 0.56 AT1G68238.1
AT1G68238
transmembrane protein
Chr4_+_620691 0.56 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_5058583 0.56 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr1_-_7531108 0.56 AT1G21500.1
AT1G21500
hypothetical protein
Chr2_+_14733975 0.56 AT2G34925.1
CLE42
CLAVATA3/ESR-RELATED 42
Chr5_-_9242854 0.56 AT5G26330.1
AT5G26330
Cupredoxin superfamily protein
Chr4_-_16583075 0.55 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr4_+_8925571 0.55 AT4G15660.1
AT4G15660
Thioredoxin superfamily protein
Chr5_-_6842946 0.55 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr5_+_5238502 0.55 AT5G16030.5
AT5G16030
mental retardation GTPase activating protein
Chr1_-_1043887 0.55 AT1G04040.1
AT1G04040
HAD superfamily, subfamily IIIB acid phosphatase
Chr4_-_7857933 0.55 AT4G13500.1
AT4G13500
transmembrane protein
Chr3_+_9525465 0.55 AT3G26060.3
PRXQ
Thioredoxin superfamily protein
Chr1_-_227302 0.55 AT1G01620.2
PIP1C
plasma membrane intrinsic protein 1C
Chr1_-_227543 0.55 AT1G01620.1
PIP1C
plasma membrane intrinsic protein 1C
Chr1_-_26468703 0.54 AT1G70280.1
AT1G70280.2
AT1G70280
NHL domain-containing protein
Chr2_-_7954680 0.54 AT2G18300.1
AT2G18300.3
AT2G18300.2
HBI1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_24494291 0.54 AT5G60890.1
MYB34
myb domain protein 34
Chr1_+_7696427 0.54 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
Chr2_+_19243348 0.53 AT2G46820.1
AT2G46820.2
PSI-P
photosystem I P subunit
Chr3_+_6510982 0.53 AT3G18890.1
Tic62
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_8360996 0.53 AT4G14560.1
IAA1
indole-3-acetic acid inducible
Chr1_+_7886323 0.53 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr3_-_2130451 0.53 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr1_+_18802552 0.53 AT1G50732.1
AT1G50732
transmembrane protein
Chr2_+_17507343 0.52 AT2G41940.1
ZFP8
zinc finger protein 8
Chr1_+_10323636 0.52 AT1G29520.1
AT1G29520
AWPM-19-like family protein
Chr3_-_19467455 0.52 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr3_-_22984566 0.52 AT3G62070.1
AT3G62070
hypothetical protein
Chr5_-_19899301 0.52 AT5G49100.1
AT5G49100
vitellogenin-like protein
Chr1_+_4899045 0.52 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
Chr2_+_266559 0.51 AT2G01590.1
AT2G01590.2
CRR3
chlororespiratory reduction 3
Chr3_-_19595834 0.51 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr2_-_12173951 0.51 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr3_-_3277930 0.51 AT3G10520.1
HB2
hemoglobin 2
Chr1_-_84864 0.50 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr4_-_7591259 0.50 AT4G12980.1
AT4G12980
Auxin-responsive family protein
Chr3_-_17337733 0.50 AT3G47070.1
AT3G47070
thylakoid soluble phosphoprotein
Chr3_+_19417372 0.50 AT3G52370.2
AT3G52370.1
FLA15
FASCICLIN-like arabinogalactan protein 15 precursor
Chr1_+_21136835 0.49 AT1G56430.1
NAS4
nicotianamine synthase 4
Chr1_+_23911024 0.49 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr4_+_14192569 0.49 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
Chr5_+_4944816 0.48 AT5G15230.1
GASA4
GAST1 protein homolog 4
Chr5_+_16468327 0.48 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
Chr3_-_489467 0.48 AT3G02380.1
COL2
CONSTANS-like 2
Chr3_-_1832190 0.48 AT3G06070.1
AT3G06070
hypothetical protein
Chr4_+_16591179 0.48 AT4G34770.1
AT4G34770
SAUR-like auxin-responsive protein family
Chr5_-_6222300 0.48 AT5G18660.1
PCB2
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_2446669 0.48 AT5G07690.1
MYB29
myb domain protein 29
Chr3_+_5676749 0.48 AT3G16660.2
AT3G16660.1
AT3G16660
Pollen Ole e 1 allergen and extensin family protein
Chr1_-_6487153 0.48 AT1G18810.1
AT1G18810
phytochrome kinase substrate-like protein
Chr1_-_4530222 0.48 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr4_-_407142 0.48 AT4G00950.1
MEE47
hypothetical protein (DUF688)
Chr2_-_18630428 0.48 AT2G45190.2
AFO
Plant-specific transcription factor YABBY family protein
Chr3_+_2563803 0.47 AT3G08030.1
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr2_-_18630779 0.47 AT2G45190.1
AFO
Plant-specific transcription factor YABBY family protein
Chr1_-_11872926 0.47 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
Chr2_-_12433796 0.47 AT2G28950.1
EXPA6
expansin A6
Chr1_-_20803449 0.47 AT1G55670.1
PSAG
photosystem I subunit G
Chr5_-_7419335 0.47 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr5_-_24990331 0.47 AT5G62220.1
GT18
glycosyltransferase 18
Chr1_-_9251659 0.46 AT1G26761.1
AT1G26761
Arabinanase/levansucrase/invertase
Chr1_+_11532199 0.46 AT1G32060.1
PRK
phosphoribulokinase
Chr1_+_17966383 0.46 AT1G48600.1
PMEAMT
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_13943732 0.46 AT4G28050.1
TET7
tetraspanin7
Chr4_+_16594362 0.46 AT4G34790.1
AT4G34790
SAUR-like auxin-responsive protein family
Chr4_+_16810482 0.46 AT4G35350.2
AT4G35350.1
XCP1
xylem cysteine peptidase 1
Chr1_+_28829243 0.46 AT1G76800.1
AT1G76800
Vacuolar iron transporter (VIT) family protein
Chr1_+_17965871 0.46 AT1G48600.2
PMEAMT
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_5550404 0.46 AT4G08685.1
SAH7
Pollen Ole e 1 allergen and extensin family protein
Chr3_-_15607606 0.45 AT3G43715.1
AT3G43715

Chr3_+_6180621 0.45 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr5_+_24940203 0.45 AT5G62100.2
AT5G62100.4
AT5G62100.3
AT5G62100.5
AT5G62100.6
AT5G62100.1
BAG2
BCL-2-associated athanogene 2
Chr5_+_4945062 0.45 AT5G15230.2
GASA4
GAST1 protein homolog 4
Chr1_-_1169034 0.45 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
Chr3_-_2216483 0.45 AT3G07010.1
AT3G07010.2
AT3G07010
Pectin lyase-like superfamily protein
Chr4_+_7531141 0.45 AT4G12830.1
AT4G12830
alpha/beta-Hydrolases superfamily protein
Chr4_+_9906821 0.45 AT4G17810.1
AT4G17810.2
AT4G17810
C2H2 and C2HC zinc fingers superfamily protein
Chr3_-_4744263 0.44 AT3G14240.1
AT3G14240
Subtilase family protein
Chr2_+_19191247 0.44 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr4_+_10651744 0.44 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
Chr4_+_15401640 0.44 AT4G31840.1
ENODL15
early nodulin-like protein 15
Chr3_-_1824309 0.44 AT3G06035.1
AT3G06035
Glycoprotein membrane precursor GPI-anchored
Chr5_-_13361771 0.44 AT5G35100.3
AT5G35100.1
AT5G35100
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr5_-_25080858 0.43 AT5G62470.1
MYB96
myb domain protein 96
Chr5_-_13361390 0.43 AT5G35100.2
AT5G35100
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr3_+_2564153 0.43 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr2_+_12156022 0.43 AT2G28410.1
AT2G28410
transmembrane protein
Chr4_+_160643 0.43 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr1_-_12150617 0.43 AT1G33480.1
AT1G33480
RING/U-box superfamily protein
Chr1_+_27670626 0.43 AT1G73600.1
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_16534265 0.43 AT3G45160.1
AT3G45160
Putative membrane lipoprotein
Chr2_-_11599322 0.43 AT2G27140.1
AT2G27140
HSP20-like chaperones superfamily protein
Chr3_-_4698141 0.43 AT3G14170.2
AT3G14170.1
AT3G14170
hypothetical protein (DUF936)
Chr5_+_1952505 0.43 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
Chr3_-_6436046 0.43 AT3G18710.1
PUB29
plant U-box 29
Chr5_+_18945543 0.43 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
Chr1_-_26515188 0.43 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr3_-_2334185 0.43 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr1_-_11740399 0.43 AT1G32470.1
AT1G32470
Single hybrid motif superfamily protein
Chr2_-_18443405 0.42 AT2G44740.1
CYCP4%3B1
cyclin p4;1
Chr3_-_18628888 0.42 AT3G50240.3
AT3G50240.2
AT3G50240.4
AT3G50240.1
KICP-02
ATP binding microtubule motor family protein
Chr3_+_484256 0.42 AT3G02370.1
AT3G02370.4
AT3G02370.2
AT3G02370.3
AT3G02370
tRNA-splicing endonuclease subunit
Chr1_-_10475969 0.42 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
Chr4_-_16384468 0.42 AT4G34220.1
AT4G34220
Leucine-rich repeat protein kinase family protein
Chr3_-_19553092 0.42 AT3G52750.3
AT3G52750.1
AT3G52750.4
FTSZ2-2
Tubulin/FtsZ family protein
Chr1_+_27669152 0.42 AT1G73600.2
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_-_16908152 0.42 AT2G40475.1
ASG8
hypothetical protein
Chr4_-_14724587 0.42 AT4G30110.2
HMA2
heavy metal atpase 2
Chr3_-_7592373 0.42 AT3G21550.1
DMP2
transmembrane protein, putative (DUF679 domain membrane protein 2)
Chr2_+_14216771 0.42 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr4_-_14725311 0.41 AT4G30110.1
HMA2
heavy metal atpase 2
Chr5_-_25373904 0.41 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
Chr2_+_9259511 0.41 AT2G21650.1
MEE3
Homeodomain-like superfamily protein
Chr3_+_17929581 0.41 AT3G48420.1
AT3G48420
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr2_+_16775424 0.41 AT2G40150.1
TBL28
TRICHOME BIREFRINGENCE-LIKE 28
Chr5_-_25081141 0.41 AT5G62470.2
MYB96
myb domain protein 96
Chr2_-_7496292 0.41 AT2G17230.1
EXL5
EXORDIUM like 5
Chr4_-_5932475 0.41 AT4G09350.1
NdhT
Chaperone DnaJ-domain superfamily protein
Chr4_+_8931617 0.41 AT4G15680.1
AT4G15680
Thioredoxin superfamily protein
Chr1_-_29518028 0.41 AT1G78450.1
AT1G78450
SOUL heme-binding family protein
Chr3_+_1225919 0.41 AT3G04550.1
AT3G04550
rubisco accumulation factor-like protein
Chr1_+_7252111 0.40 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr5_+_22808641 0.40 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr3_-_1855063 0.40 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
Chr1_-_19101265 0.40 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
Chr3_+_288741 0.40 AT3G01810.2
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr1_-_11548016 0.40 AT1G32100.1
PRR1
pinoresinol reductase 1
Chr3_-_18409784 0.40 AT3G49650.1
AT3G49650
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_6493512 0.40 AT2G15020.1
AT2G15020
hypothetical protein
Chr4_+_8470179 0.40 AT4G14750.2
AT4G14750.3
AT4G14750.1
IQD19
IQ-domain 19
Chr3_+_288538 0.40 AT3G01810.3
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr5_+_22474142 0.40 AT5G55480.1
SVL1
SHV3-like 1
Chr5_-_24326827 0.40 AT5G60490.1
FLA12
FASCICLIN-like arabinogalactan-protein 12
Chr1_+_21241579 0.40 AT1G56670.1
AT1G56670.2
AT1G56670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_26560123 0.40 AT1G70470.1
AT1G70470
transmembrane protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G55370

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 4.8 GO:0015976 carbon utilization(GO:0015976)
0.3 5.5 GO:0006949 syncytium formation(GO:0006949)
0.2 0.2 GO:0060919 auxin influx(GO:0060919)
0.2 0.8 GO:0015669 gas transport(GO:0015669)
0.2 0.6 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.2 0.7 GO:0050891 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.2 1.6 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.2 0.5 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.2 0.5 GO:0007639 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.2 1.2 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.2 0.9 GO:0046713 borate transport(GO:0046713)
0.2 1.6 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.2 1.1 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.2 0.8 GO:0042550 photosystem I stabilization(GO:0042550)
0.2 1.1 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.2 0.8 GO:0006106 fumarate metabolic process(GO:0006106)
0.2 1.2 GO:0010065 primary meristem tissue development(GO:0010065)
0.2 1.1 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.6 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.6 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.1 GO:0015675 nickel cation transport(GO:0015675)
0.1 0.4 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.9 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 0.7 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.6 GO:0010450 inflorescence meristem growth(GO:0010450)
0.1 0.5 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.1 0.4 GO:1900544 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.1 0.4 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 0.8 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 0.2 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.1 0.6 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.1 1.1 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.1 0.4 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.1 0.3 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.1 0.7 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.1 0.3 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 0.7 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.1 0.5 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.1 0.5 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 1.7 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 0.3 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.6 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.1 0.8 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 1.1 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.1 0.4 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.9 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.9 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 1.7 GO:0009750 response to fructose(GO:0009750)
0.1 0.3 GO:0071266 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.1 0.3 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.1 0.4 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 0.3 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.1 0.7 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.1 0.4 GO:0006788 heme oxidation(GO:0006788)
0.1 0.3 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.2 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 0.2 GO:0048255 mRNA stabilization(GO:0048255)
0.1 0.5 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.2 GO:0043447 alkane biosynthetic process(GO:0043447)
0.1 0.4 GO:0007142 male meiosis II(GO:0007142)
0.1 0.9 GO:0007143 female meiotic division(GO:0007143)
0.1 1.1 GO:0010052 guard cell differentiation(GO:0010052)
0.1 0.2 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 1.0 GO:0010274 hydrotropism(GO:0010274)
0.1 0.4 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.4 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.1 0.5 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.1 0.6 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.1 0.2 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.4 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 1.4 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.1 0.2 GO:0051639 actin filament network formation(GO:0051639)
0.1 0.4 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 0.4 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.3 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.1 0.7 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.1 0.2 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.4 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.3 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.1 1.1 GO:0010315 auxin efflux(GO:0010315)
0.1 0.7 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 0.2 GO:0080117 secondary growth(GO:0080117)
0.1 0.1 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.3 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.1 0.8 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 0.8 GO:0032544 plastid translation(GO:0032544)
0.1 0.8 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.5 GO:0009643 photosynthetic acclimation(GO:0009643)
0.1 0.2 GO:0090058 metaxylem development(GO:0090058)
0.1 0.5 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.1 1.8 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 0.1 GO:0090342 regulation of cell aging(GO:0090342)
0.1 0.7 GO:0019685 photosynthesis, dark reaction(GO:0019685)
0.1 1.1 GO:0010215 cellulose microfibril organization(GO:0010215)
0.1 0.4 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 0.4 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 1.5 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 0.3 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.1 0.2 GO:0045682 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.1 0.3 GO:0035627 ceramide transport(GO:0035627)
0.1 1.4 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.2 GO:0010254 nectary development(GO:0010254)
0.1 0.2 GO:0036292 DNA rewinding(GO:0036292)
0.1 0.2 GO:0071457 cellular response to ozone(GO:0071457)
0.1 0.3 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.4 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.2 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.1 0.4 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.1 0.8 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.1 0.2 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 0.3 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.6 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.1 GO:0090603 sieve element differentiation(GO:0090603)
0.1 3.6 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.3 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.1 0.8 GO:0048564 photosystem I assembly(GO:0048564)
0.1 0.1 GO:0040014 regulation of multicellular organism growth(GO:0040014)
0.1 0.3 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.1 3.2 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 1.1 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 2.6 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.1 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.0 0.1 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.0 0.2 GO:0009865 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.0 1.8 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.3 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.1 GO:0010117 photoprotection(GO:0010117)
0.0 0.1 GO:0006471 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.0 2.7 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.2 GO:0036065 fucosylation(GO:0036065)
0.0 0.4 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.3 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.0 0.1 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.1 GO:0071836 nectar secretion(GO:0071836)
0.0 1.5 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.1 GO:0090549 response to carbon starvation(GO:0090549)
0.0 0.5 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.3 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.0 0.4 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.1 GO:2000036 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.0 0.2 GO:0043489 RNA stabilization(GO:0043489)
0.0 0.7 GO:0048829 root cap development(GO:0048829)
0.0 0.3 GO:0072337 modified amino acid transport(GO:0072337)
0.0 0.2 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.0 0.1 GO:0060631 regulation of meiosis I(GO:0060631)
0.0 0.2 GO:0009590 detection of gravity(GO:0009590)
0.0 0.1 GO:0035864 response to potassium ion(GO:0035864)
0.0 0.1 GO:0032025 response to cobalt ion(GO:0032025)
0.0 0.9 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 2.6 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 1.5 GO:0042335 cuticle development(GO:0042335)
0.0 0.1 GO:0032414 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of transmembrane transport(GO:0034764) positive regulation of ion transmembrane transport(GO:0034767) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.0 0.2 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.2 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.0 0.3 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.0 0.3 GO:0009838 abscission(GO:0009838)
0.0 0.2 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.0 1.1 GO:0006284 base-excision repair(GO:0006284)
0.0 0.4 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.0 GO:0010434 bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.0 0.3 GO:0048640 negative regulation of developmental growth(GO:0048640)
0.0 0.3 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.1 GO:0010045 response to nickel cation(GO:0010045)
0.0 0.0 GO:0052018 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.0 0.2 GO:0051320 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.0 0.1 GO:0000212 meiotic spindle organization(GO:0000212)
0.0 0.3 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 0.3 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.1 GO:0006824 cobalt ion transport(GO:0006824)
0.0 0.1 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.0 0.4 GO:0052192 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.1 GO:0031110 regulation of microtubule polymerization or depolymerization(GO:0031110)
0.0 0.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.2 GO:0006751 glutathione catabolic process(GO:0006751)
0.0 0.2 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.0 0.1 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 0.1 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.1 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.0 0.1 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.0 0.2 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 1.3 GO:0016131 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.0 0.1 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.1 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.1 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.0 0.1 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.0 0.1 GO:0010394 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.0 0.2 GO:0070828 heterochromatin organization(GO:0070828)
0.0 2.7 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.3 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.7 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.0 0.2 GO:0046717 icosanoid secretion(GO:0032309) acid secretion(GO:0046717) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.0 0.1 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.0 2.2 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.1 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.0 0.1 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.0 0.1 GO:0046208 spermine catabolic process(GO:0046208)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 1.5 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.0 0.1 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.0 0.3 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.1 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.3 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.0 0.2 GO:0032147 activation of protein kinase activity(GO:0032147) positive regulation of MAPK cascade(GO:0043410)
0.0 0.2 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.2 GO:0009099 valine biosynthetic process(GO:0009099)
0.0 0.3 GO:1902222 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.0 0.1 GO:0071486 cellular response to high light intensity(GO:0071486)
0.0 0.1 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.0 GO:0033559 unsaturated fatty acid metabolic process(GO:0033559)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.8 GO:0099515 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.1 GO:0030974 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.0 0.1 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.0 0.5 GO:0046885 regulation of hormone biosynthetic process(GO:0046885)
0.0 0.6 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.2 GO:0097502 mannosylation(GO:0097502)
0.0 0.6 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.1 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.0 0.3 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.0 0.1 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.0 0.4 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.5 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.2 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.3 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.3 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.2 GO:0048830 adventitious root development(GO:0048830)
0.0 0.1 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.0 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.0 0.1 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.8 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.3 GO:0032875 regulation of DNA endoreduplication(GO:0032875)
0.0 0.2 GO:0080112 seed growth(GO:0080112)
0.0 0.1 GO:0035493 SNARE complex assembly(GO:0035493)
0.0 0.5 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.5 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.0 0.0 GO:0048533 sporocyte differentiation(GO:0048533)
0.0 1.1 GO:0010102 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 0.0 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.1 GO:0006349 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.0 0.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.0 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.0 0.2 GO:0048859 formation of organ boundary(GO:0010160) formation of anatomical boundary(GO:0048859)
0.0 0.2 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.1 GO:0043132 NAD transport(GO:0043132)
0.0 0.1 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.0 0.3 GO:0006265 DNA topological change(GO:0006265)
0.0 0.3 GO:0009704 de-etiolation(GO:0009704)
0.0 0.0 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.0 0.0 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.0 0.2 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.1 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.4 GO:1901071 glucosamine-containing compound metabolic process(GO:1901071)
0.0 0.2 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.0 0.1 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.0 0.2 GO:0009785 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.3 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.3 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.1 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.4 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.5 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.1 GO:0034389 lipid particle organization(GO:0034389)
0.0 0.2 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.0 0.1 GO:0009635 response to herbicide(GO:0009635)
0.0 0.1 GO:2000014 regulation of endosperm development(GO:2000014)
0.0 0.0 GO:0009943 adaxial/abaxial axis specification(GO:0009943)
0.0 0.1 GO:0006449 regulation of translational termination(GO:0006449)
0.0 0.1 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.0 0.1 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.1 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.0 0.1 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.1 GO:0010496 intercellular transport(GO:0010496)
0.0 0.5 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.1 GO:0042362 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.0 0.1 GO:0080119 ER body organization(GO:0080119)
0.0 0.0 GO:0046898 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.0 0.1 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.1 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.0 0.3 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.2 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.4 GO:0010214 seed coat development(GO:0010214)
0.0 0.2 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.0 0.1 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.1 GO:0010155 regulation of proton transport(GO:0010155)
0.0 0.3 GO:0050821 protein stabilization(GO:0050821)
0.0 0.3 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.1 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.0 0.1 GO:1902408 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.0 0.1 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.0 0.1 GO:0007020 microtubule nucleation(GO:0007020)
0.0 0.2 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.0 GO:0033206 meiotic cytokinesis(GO:0033206)
0.0 0.1 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.0 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.0 GO:0019184 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.0 0.2 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.0 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.0 0.2 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.2 GO:0010166 wax metabolic process(GO:0010166)
0.0 0.3 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.1 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.0 0.0 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.2 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.3 GO:0051225 spindle assembly(GO:0051225)
0.0 0.1 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.0 0.2 GO:0080022 primary root development(GO:0080022)
0.0 0.0 GO:0006499 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.0 0.2 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.0 GO:0048439 flower morphogenesis(GO:0048439)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.1 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.0 0.1 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.0 0.2 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.4 GO:0048825 cotyledon development(GO:0048825)
0.0 0.3 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.1 GO:0016572 histone phosphorylation(GO:0016572)
0.0 0.0 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.0 0.2 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.2 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.1 GO:0006273 lagging strand elongation(GO:0006273)
0.0 0.0 GO:0031054 pre-miRNA processing(GO:0031054)
0.0 0.1 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.0 0.1 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.0 GO:0051289 protein homotetramerization(GO:0051289)
0.0 0.1 GO:0007043 cell-cell junction assembly(GO:0007043)
0.0 0.2 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.4 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.4 GO:0015979 photosynthesis(GO:0015979)
0.0 0.8 GO:0006869 lipid transport(GO:0006869)
0.0 0.1 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.0 0.0 GO:0071483 cellular response to blue light(GO:0071483)
0.0 0.1 GO:0031145 anaphase-promoting complex-dependent catabolic process(GO:0031145)
0.0 0.1 GO:0036297 interstrand cross-link repair(GO:0036297)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0030093 chloroplast photosystem I(GO:0030093)
0.3 0.9 GO:0031977 thylakoid lumen(GO:0031977)
0.3 0.8 GO:0043667 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.2 0.2 GO:0016328 lateral plasma membrane(GO:0016328)
0.2 1.1 GO:0005960 glycine cleavage complex(GO:0005960)
0.2 1.8 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.2 1.3 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.1 1.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 0.5 GO:0016461 unconventional myosin complex(GO:0016461)
0.1 5.6 GO:0010319 stromule(GO:0010319)
0.1 1.9 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 0.6 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 0.4 GO:0070505 pollen coat(GO:0070505)
0.1 0.3 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 1.3 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 0.3 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 0.2 GO:0010007 magnesium chelatase complex(GO:0010007)
0.1 0.1 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.4 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.1 0.4 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.1 0.2 GO:0032432 actin filament bundle(GO:0032432)
0.1 0.4 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 0.4 GO:0009346 citrate lyase complex(GO:0009346)
0.1 10.0 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.7 GO:0009522 photosystem I(GO:0009522)
0.1 0.1 GO:0035101 FACT complex(GO:0035101)
0.1 1.0 GO:0009531 secondary cell wall(GO:0009531)
0.1 0.4 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 3.2 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 1.3 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.0 15.3 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 0.1 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.1 GO:0097361 CIA complex(GO:0097361)
0.0 0.4 GO:0042555 MCM complex(GO:0042555)
0.0 0.2 GO:0090397 stigma papilla(GO:0090397)
0.0 0.2 GO:0030141 secretory granule(GO:0030141)
0.0 0.1 GO:0097196 Shu complex(GO:0097196)
0.0 0.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 2.3 GO:0009579 thylakoid(GO:0009579)
0.0 0.1 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.0 0.2 GO:0071818 BAT3 complex(GO:0071818)
0.0 0.1 GO:0010330 cellulose synthase complex(GO:0010330)
0.0 0.8 GO:0005871 kinesin complex(GO:0005871)
0.0 0.3 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.1 GO:0044426 cell wall part(GO:0044426) external encapsulating structure part(GO:0044462)
0.0 0.1 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 0.4 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.2 GO:0000796 condensin complex(GO:0000796)
0.0 0.1 GO:1990298 bub1-bub3 complex(GO:1990298)
0.0 1.2 GO:0005764 lysosome(GO:0005764)
0.0 5.0 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.6 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.1 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.1 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.8 GO:0005875 microtubule associated complex(GO:0005875)
0.0 2.8 GO:0031225 anchored component of membrane(GO:0031225)
0.0 1.7 GO:0005874 microtubule(GO:0005874)
0.0 0.1 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 4.7 GO:0048046 apoplast(GO:0048046)
0.0 0.1 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.1 GO:0009513 etioplast(GO:0009513)
0.0 0.2 GO:0031209 SCAR complex(GO:0031209)
0.0 0.1 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.2 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.2 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.3 GO:0000792 heterochromatin(GO:0000792)
0.0 0.1 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.0 0.1 GO:0044545 NSL complex(GO:0044545)
0.0 0.3 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.1 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.0 0.0 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.0 0.1 GO:0035618 root hair(GO:0035618)
0.0 26.4 GO:0005576 extracellular region(GO:0005576)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.3 0.9 GO:0051738 xanthophyll binding(GO:0051738)
0.2 1.9 GO:0019137 thioglucosidase activity(GO:0019137)
0.2 0.7 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.2 1.0 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.2 6.0 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.2 0.6 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.2 0.5 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.2 0.5 GO:0015026 coreceptor activity(GO:0015026)
0.2 0.5 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.2 0.9 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.2 0.5 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.2 0.7 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.2 0.8 GO:0004333 fumarate hydratase activity(GO:0004333)
0.2 0.5 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.2 0.5 GO:0005344 oxygen transporter activity(GO:0005344)
0.1 1.0 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 0.7 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 1.1 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 0.4 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.1 0.5 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.1 0.7 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.4 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.1 0.4 GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 2.5 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.4 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.1 0.5 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.9 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 2.8 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 1.1 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 0.6 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 0.4 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.1 0.9 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.3 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.1 0.4 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.8 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.5 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.1 1.2 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 2.3 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 1.3 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.1 0.4 GO:0070402 NADPH binding(GO:0070402)
0.1 0.4 GO:0009885 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.1 0.4 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.1 0.3 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.1 1.8 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.2 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 1.2 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.2 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.1 0.4 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.7 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 0.2 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 0.6 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.3 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 1.9 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 0.4 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.2 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.2 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.2 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 0.6 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.7 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.1 0.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.1 GO:0005034 osmosensor activity(GO:0005034)
0.1 0.3 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 0.3 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.5 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.1 0.3 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.1 0.3 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 0.4 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.4 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.3 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.1 1.5 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.3 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 0.7 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.5 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.1 0.1 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.3 GO:0035197 siRNA binding(GO:0035197)
0.1 0.5 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.3 GO:0046624 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.2 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.1 0.2 GO:0019904 protein domain specific binding(GO:0019904)
0.1 4.1 GO:0003777 microtubule motor activity(GO:0003777)
0.1 0.2 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 1.5 GO:0008810 cellulase activity(GO:0008810)
0.1 0.4 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 0.2 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 0.6 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 0.2 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.5 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 0.2 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.3 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.2 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.0 0.3 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.6 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.1 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.0 0.1 GO:0009374 biotin binding(GO:0009374)
0.0 1.1 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.3 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.5 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.4 GO:0004096 catalase activity(GO:0004096)
0.0 0.6 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 2.2 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.1 GO:0016972 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.0 1.8 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.1 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.0 0.5 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.0 0.2 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.0 0.4 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.3 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 0.6 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.5 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.2 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.2 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.1 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.0 1.9 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.2 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.2 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.0 0.8 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.2 GO:0048365 Rac GTPase binding(GO:0048365)
0.0 0.1 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.3 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.0 0.1 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.0 0.1 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.5 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.1 GO:1990465 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.2 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.0 0.1 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.0 0.3 GO:0008083 growth factor activity(GO:0008083)
0.0 2.5 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.7 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 2.0 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.1 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.2 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.2 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.2 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.1 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.0 0.7 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.2 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.3 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.1 GO:0036310 annealing helicase activity(GO:0036310)
0.0 0.1 GO:0004645 phosphorylase activity(GO:0004645)
0.0 0.2 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.8 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.1 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.0 0.1 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.0 0.1 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.0 3.0 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.2 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.1 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.0 0.2 GO:0000400 four-way junction DNA binding(GO:0000400)
0.0 0.1 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.0 0.2 GO:0004312 fatty acid synthase activity(GO:0004312)
0.0 0.2 GO:0048256 flap endonuclease activity(GO:0048256)
0.0 0.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.1 GO:0016436 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.1 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.0 0.3 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.1 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.2 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.2 GO:0019158 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.2 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 0.3 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0 0.2 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.2 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.1 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.0 0.3 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.1 GO:0019825 oxygen binding(GO:0019825)
0.0 0.2 GO:0015081 sodium ion transmembrane transporter activity(GO:0015081)
0.0 0.1 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 1.2 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.1 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.0 0.2 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 2.5 GO:0009055 electron carrier activity(GO:0009055)
0.0 1.0 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.1 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.0 0.1 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 0.8 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 3.4 GO:0008134 transcription factor binding(GO:0008134)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.2 GO:0008061 chitin binding(GO:0008061)
0.0 0.1 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.0 0.1 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.0 0.1 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.0 0.3 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.3 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.1 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.6 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 0.2 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.1 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.0 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.0 0.0 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.0 0.2 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 0.1 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.0 0.0 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.5 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.1 GO:0045431 flavonol synthase activity(GO:0045431)
0.0 0.8 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.2 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.1 GO:0035173 histone kinase activity(GO:0035173)
0.0 0.3 GO:0008106 aldo-keto reductase (NADP) activity(GO:0004033) alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.2 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.1 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.2 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.1 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.0 0.2 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.7 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.1 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.5 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.2 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.0 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.0 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.0 0.1 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.0 0.0 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.0 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.0 0.1 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.0 0.1 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 0.1 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.0 0.1 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.0 0.1 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.0 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.0 0.8 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.0 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.1 GO:0030060 L-malate dehydrogenase activity(GO:0030060)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 3.6 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.7 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.1 0.5 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.4 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.1 0.2 PID P53 REGULATION PATHWAY p53 pathway
0.0 0.3 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.2 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.0 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.0 0.1 ST GRANULE CELL SURVIVAL PATHWAY Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.
0.0 0.2 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.2 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.0 0.1 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 0.2 PID ATR PATHWAY ATR signaling pathway
0.0 0.2 NABA MATRISOME Ensemble of genes encoding extracellular matrix and extracellular matrix-associated proteins
0.0 0.1 PID CDC42 PATHWAY CDC42 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 4.9 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.1 0.3 REACTOME EGFR DOWNREGULATION Genes involved in EGFR downregulation
0.1 0.4 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.1 0.4 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.3 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.1 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.2 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.1 0.2 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.1 0.1 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.1 0.1 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.0 0.2 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.0 0.1 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.0 0.2 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.0 0.1 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.2 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.0 0.1 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.0 0.1 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.0 0.2 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.0 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.0 0.1 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.1 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.0 0.0 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.0 0.0 REACTOME G ALPHA1213 SIGNALLING EVENTS Genes involved in G alpha (12/13) signalling events