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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G53200

Z-value: 2.11

Transcription factors associated with AT3G53200

Gene Symbol Gene ID Gene Info
AT3G53200
AT3G53200 myb domain protein 27

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB27arTal_v1_Chr3_-_19719507_197195070.329.4e-02Click!

Activity profile of AT3G53200 motif

Sorted Z-values of AT3G53200 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_1464467 9.57 AT4G03320.1
Tic20-IV
translocon at the inner envelope membrane of chloroplasts 20-IV
Chr1_-_20385380 9.52 AT1G54570.1
PES1
Esterase/lipase/thioesterase family protein
Chr3_-_2699257 9.01 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr2_-_6242541 8.86 AT2G14610.1
PR1
pathogenesis-related protein 1
Chr1_-_460696 8.83 AT1G02310.1
AT1G02310.2
MAN1
Glycosyl hydrolase superfamily protein
Chr3_-_2699420 8.79 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr1_-_19698482 8.62 AT1G52890.1
NAC019
NAC domain containing protein 19
Chr1_+_27538190 8.35 AT1G73220.1
OCT1
organic cation/carnitine transporter1
Chr5_-_6042938 8.34 AT5G18270.2
AT5G18270.1
ANAC087
NAC domain containing protein 87
Chr4_+_10974456 8.32 AT4G20320.2
AT4G20320.4
AT4G20320.3
AT4G20320.1
AT4G20320.5
AT4G20320.6
AT4G20320
CTP synthase family protein
Chr3_-_1063103 8.25 AT3G04070.2
AT3G04070.1
NAC047
NAC domain containing protein 47
Chr3_-_826585 8.02 AT3G03470.1
CYP89A9
cytochrome P450, family 87, subfamily A, polypeptide 9
Chr3_+_19239305 7.99 AT3G51860.1
AT3G51860.2
CAX3
cation exchanger 3
Chr4_-_9368852 7.90 AT4G16640.1
AT4G16640
Matrixin family protein
Chr2_+_17251819 7.80 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_20455317 7.75 AT5G50260.1
CEP1
Cysteine proteinases superfamily protein
Chr1_+_5389952 7.61 AT1G15670.1
AT1G15670
Galactose oxidase/kelch repeat superfamily protein
Chr5_-_9000345 7.48 AT5G25820.1
AT5G25820
Exostosin family protein
Chr2_-_12627891 7.23 AT2G29460.1
GSTU4
glutathione S-transferase tau 4
Chr1_+_1469541 7.03 AT1G05100.1
MAPKKK18
mitogen-activated protein kinase kinase kinase 18
Chr1_-_23690807 6.97 AT1G63840.1
AT1G63840
RING/U-box superfamily protein
Chr4_-_2234689 6.90 AT4G04490.1
CRK36
cysteine-rich RLK (RECEPTOR-like protein kinase) 36
Chr5_-_2079005 6.76 AT5G06720.1
PA2
peroxidase 2
Chr1_+_5822309 6.72 AT1G17030.1
AT1G17030
hypothetical protein
Chr2_-_9538963 6.70 AT2G22470.1
AGP2
arabinogalactan protein 2
Chr1_-_7553975 6.68 AT1G21550.1
AT1G21550
Calcium-binding EF-hand family protein
Chr5_+_5710910 6.66 AT5G17330.1
GAD
glutamate decarboxylase
Chr5_-_17994584 6.66 AT5G44610.3
AT5G44610.2
AT5G44610.1
MAP18
microtubule-associated protein 18
Chr3_+_4109375 6.62 AT3G12910.1
AT3G12910
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr2_+_14783254 6.60 AT2G35070.1
AT2G35070.2
AT2G35070
transmembrane protein
Chr3_-_10790553 6.58 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
Chr5_-_9247540 6.54 AT5G26340.1
MSS1
Major facilitator superfamily protein
Chr1_-_3323735 6.38 AT1G10140.1
AT1G10140
Uncharacterized conserved protein UCP031279
Chr3_-_7818985 6.38 AT3G22160.1
AT3G22160
VQ motif-containing protein
Chr5_-_23281271 6.35 AT5G57480.1
AT5G57480
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_2867203 6.25 AT1G08920.1
AT1G08920.2
AT1G08920.3
ESL1
ERD (early response to dehydration) six-like 1
Chr1_-_19789029 6.24 AT1G53100.2
AT1G53100.1
AT1G53100
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr1_+_28291698 6.24 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
Chr3_+_21380648 6.14 AT3G57680.1
AT3G57680.2
AT3G57680
Peptidase S41 family protein
Chr3_-_10047453 6.10 AT3G27210.1
AT3G27210
hypothetical protein
Chr3_+_9887917 5.94 AT3G26830.1
PAD3
Cytochrome P450 superfamily protein
Chr3_+_8575051 5.92 AT3G23790.1
AAE16
AMP-dependent synthetase and ligase family protein
Chr1_-_17706460 5.84 AT1G48000.1
MYB112
myb domain protein 112
Chr5_-_21265460 5.76 AT5G52390.1
AT5G52390
PAR1 protein
Chr1_-_27119918 5.66 AT1G72070.1
AT1G72070
Chaperone DnaJ-domain superfamily protein
Chr1_-_2282828 5.64 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
Chr5_+_16301072 5.62 AT5G40730.1
AGP24
arabinogalactan protein 24
Chr5_+_4461554 5.61 AT5G13820.2
TBP1
telomeric DNA binding protein 1
Chr3_-_8036005 5.61 AT3G22740.1
HMT3
homocysteine S-methyltransferase 3
Chr2_+_12767585 5.58 AT2G29950.1
ELF4-L1
ELF4-like 1
Chr1_-_24558322 5.53 AT1G65970.1
TPX2
thioredoxin-dependent peroxidase 2
Chr5_+_91786 5.53 AT5G01225.1
AT5G01225
josephin-like protein
Chr3_+_22716238 5.49 AT3G61390.1
AT3G61390.2
AT3G61390.3
AT3G61390.4
AT3G61390.5
AT3G61390
RING/U-box superfamily protein
Chr1_+_28740540 5.44 AT1G76590.1
AT1G76590
PLATZ transcription factor family protein
Chr5_-_25168060 5.43 AT5G62680.1
GTR2
Major facilitator superfamily protein
Chr5_-_26096114 5.43 AT5G65300.1
AT5G65300
hypothetical protein
Chr3_+_22925742 5.42 AT3G61900.1
AT3G61900
SAUR-like auxin-responsive protein family
Chr3_+_21381599 5.40 AT3G57680.3
AT3G57680
Peptidase S41 family protein
Chr4_-_11971203 5.37 AT4G22780.1
ACR7
ACT domain repeat 7
Chr5_-_7828724 5.35 AT5G23240.1
AT5G23240
DNAJ heat shock N-terminal domain-containing protein
Chr5_-_2961382 5.34 AT5G09530.1
PELPK1
hydroxyproline-rich glycoprotein family protein
Chr4_-_11971357 5.34 AT4G22780.2
ACR7
ACT domain repeat 7
Chr5_+_4460840 5.32 AT5G13820.1
TBP1
telomeric DNA binding protein 1
Chr4_-_16942060 5.30 AT4G35750.1
AT4G35750
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr2_-_6710856 5.22 AT2G15390.1
FUT4
fucosyltransferase 4
Chr5_-_2081685 5.19 AT5G06730.1
AT5G06730
Peroxidase superfamily protein
Chr2_-_6711156 5.18 AT2G15390.2
FUT4
fucosyltransferase 4
Chr2_-_7256831 5.15 AT2G16720.1
MYB7
myb domain protein 7
Chr1_-_24001593 5.13 AT1G64610.2
AT1G64610
Transducin/WD40 repeat-like superfamily protein
Chr2_+_8207199 5.10 AT2G18950.1
AT2G18950.2
HPT1
homogentisate phytyltransferase 1
Chr3_-_9471039 5.03 AT3G25882.1
NIMIN-2
NIM1-interacting 2
Chr3_-_21303230 5.02 AT3G57540.1
AT3G57540
Remorin family protein
Chr2_-_8447355 5.00 AT2G19500.1
CKX2
cytokinin oxidase 2
Chr5_-_15279317 5.00 AT5G38240.1
AT5G38240.2
AT5G38240.3
AT5G38240
Protein kinase family protein
Chr5_+_25550937 4.97 AT5G63850.1
AAP4
amino acid permease 4
Chr3_-_6804114 4.95 AT3G19580.2
ZF2
zinc-finger protein 2
Chr1_-_24002058 4.94 AT1G64610.1
AT1G64610
Transducin/WD40 repeat-like superfamily protein
Chr1_+_28778622 4.89 AT1G76690.1
OPR2
12-oxophytodienoate reductase 2
Chr1_-_11719988 4.87 AT1G32450.1
NRT1.5
nitrate transporter 1.5
Chr3_-_6804296 4.86 AT3G19580.1
ZF2
zinc-finger protein 2
Chr2_+_15514923 4.86 AT2G36950.1
AT2G36950
Heavy metal transport/detoxification superfamily protein
Chr3_-_1678968 4.75 AT3G05690.2
AT3G05690.1
NF-YA2
nuclear factor Y, subunit A2
Chr1_-_11418464 4.73 AT1G31820.1
PUT1
Amino acid permease family protein
Chr1_-_27119715 4.73 AT1G72070.2
AT1G72070
Chaperone DnaJ-domain superfamily protein
Chr3_-_17976774 4.71 AT3G48520.1
CYP94B3
cytochrome P450, family 94, subfamily B, polypeptide 3
Chr2_-_19412328 4.68 AT2G47270.1
UPB1
transcription factor UPBEAT protein
Chr2_+_6758430 4.64 AT2G15480.1
UGT73B5
UDP-glucosyl transferase 73B5
Chr1_-_20967162 4.62 AT1G56060.2
AT1G56060.1
AT1G56060
cysteine-rich/transmembrane domain protein B
Chr5_-_1887031 4.61 AT5G06230.2
AT5G06230.3
AT5G06230.1
TBL9
TRICHOME BIREFRINGENCE-LIKE 9
Chr2_-_12938834 4.58 AT2G30360.1
SIP4
SOS3-interacting protein 4
Chr4_-_14393381 4.57 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr3_-_21285941 4.54 AT3G57510.1
ADPG1
Pectin lyase-like superfamily protein
Chr1_+_10537648 4.51 AT1G30040.2
GA2OX2
gibberellin 2-oxidase
Chr5_-_22507879 4.49 AT5G55560.1
AT5G55560
Protein kinase superfamily protein
Chr5_+_19166859 4.47 AT5G47200.1
RAB1A
RAB GTPase homolog 1A
Chr2_+_8647721 4.47 AT2G20030.1
AT2G20030
RING/U-box superfamily protein
Chr2_-_476650 4.47 AT2G02010.1
GAD4
glutamate decarboxylase 4
Chr1_-_26481630 4.44 AT1G70300.1
KUP6
K+ uptake permease 6
Chr3_-_18373147 4.41 AT3G49570.1
LSU3
response to low sulfur 3
Chr5_+_23928954 4.40 AT5G59320.1
LTP3
lipid transfer protein 3
Chr1_+_4367256 4.39 AT1G12810.2
AT1G12810.1
AT1G12810
proline-rich family protein
Chr1_-_9935264 4.39 AT1G28330.3
AT1G28330.2
AT1G28330.4
AT1G28330.1
AT1G28330.6
AT1G28330.5
DYL1
dormancy-associated protein-like 1
Chr4_-_7414955 4.38 AT4G12500.1
AT4G12500
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_10442608 4.38 AT3G28050.1
UMAMIT41
nodulin MtN21 /EamA-like transporter family protein
Chr5_+_9648508 4.38 AT5G27350.1
SFP1
Major facilitator superfamily protein
Chr1_+_10537457 4.38 AT1G30040.1
GA2OX2
gibberellin 2-oxidase
Chr1_+_2442570 4.37 AT1G07900.1
LBD1
LOB domain-containing protein 1
Chr5_+_9974411 4.35 AT5G27940.1
WPP3
WPP domain protein 3
Chr2_+_13658888 4.32 AT2G32150.1
AT2G32150.2
AT2G32150.3
AT2G32150
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr2_-_476997 4.29 AT2G02010.2
GAD4
glutamate decarboxylase 4
Chr2_+_11364996 4.29 AT2G26695.2
AT2G26695.1
AT2G26695
Ran BP2/NZF zinc finger-like superfamily protein
Chr1_-_13365172 4.28 AT1G35910.1
TPPD
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_-_10071108 4.27 AT1G28650.1
AT1G28650
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_10456029 4.26 AT3G28100.1
AT3G28100.2
AT3G28100.3
UMAMIT45
nodulin MtN21 /EamA-like transporter family protein
Chr4_-_386479 4.22 AT4G00900.2
ECA2
ER-type Ca2+-ATPase 2
Chr2_-_16368570 4.21 AT2G39210.1
AT2G39210
Major facilitator superfamily protein
Chr5_-_25661007 4.18 AT5G64120.1
AT5G64120
Peroxidase superfamily protein
Chr1_-_3419691 4.16 AT1G10410.1
AT1G10410
CW14 protein (DUF1336)
Chr4_-_386850 4.15 AT4G00900.1
ECA2
ER-type Ca2+-ATPase 2
Chr1_+_22893101 4.15 AT1G61930.1
AT1G61930
senescence regulator (Protein of unknown function, DUF584)
Chr4_+_2907012 4.12 AT4G05590.1
AT4G05590.3
AT4G05590.2
AT4G05590
pyruvate carrier-like protein
Chr3_-_1462917 4.12 AT3G05165.4
AT3G05165.1
AT3G05165.6
AT3G05165.3
AT3G05165.5
AT3G05165.2
AT3G05165
Major facilitator superfamily protein
Chr2_-_10672892 4.12 AT2G25090.1
CIPK16
CBL-interacting protein kinase 16
Chr1_-_20784017 4.11 AT1G55610.2
AT1G55610.1
BRL1
BRI1 like
Chr5_-_1217362 4.11 AT5G04340.1
ZAT6
6
Chr1_+_17643976 4.10 AT1G47890.1
RLP7
receptor like protein 7
Chr5_-_270646 4.08 AT5G01720.1
AT5G01720
RNI-like superfamily protein
Chr2_+_17221840 4.08 AT2G41310.1
RR3
response regulator 3
Chr1_-_29077390 4.07 AT1G77380.1
AAP3
amino acid permease 3
Chr5_-_18679191 4.06 AT5G46050.1
PTR3
peptide transporter 3
Chr1_+_480650 4.04 AT1G02390.1
GPAT2
glycerol-3-phosphate acyltransferase 2
Chr4_+_13275200 4.03 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr2_-_9000228 4.03 AT2G20921.1
AT2G20921
hypothetical protein
Chr2_-_16686815 4.01 AT2G39970.1
PXN
Mitochondrial substrate carrier family protein
Chr1_-_10073388 4.01 AT1G28660.2
AT1G28660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_21386727 3.97 AT5G52760.1
AT5G52760.2
AT5G52760
Copper transport protein family
Chr2_+_17909007 3.95 AT2G43060.1
IBH1
ILI1 binding bHLH 1
Chr1_-_10073549 3.95 AT1G28660.1
AT1G28660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_26163715 3.95 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr2_-_9991526 3.94 AT2G23450.1
AT2G23450
Protein kinase superfamily protein
Chr2_-_13272534 3.94 AT2G31141.1
AT2G31141.2
AT2G31141
hypothetical protein
Chr5_-_18676883 3.91 AT5G46050.2
PTR3
peptide transporter 3
Chr2_-_9992010 3.90 AT2G23450.2
AT2G23450
Protein kinase superfamily protein
Chr5_-_2364479 3.89 AT5G07470.1
PMSR3
peptidemethionine sulfoxide reductase 3
Chr2_+_9627342 3.87 AT2G22660.3
AT2G22660.2
AT2G22660.1
AT2G22660
DNA-binding protein, putative (duplicated DUF1399)
Chr5_-_16570275 3.87 AT5G41400.1
AT5G41400
RING/U-box superfamily protein
Chr2_+_18624264 3.87 AT2G45170.1
AT2G45170.2
ATG8E
AUTOPHAGY 8E
Chr4_+_1306313 3.87 AT4G02940.1
AT4G02940
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Chr5_-_22030060 3.85 AT5G54250.2
AT5G54250.1
AT5G54250.4
AT5G54250.3
CNGC4
cyclic nucleotide-gated cation channel 4
Chr1_-_17438357 3.83 AT1G47510.2
AT1G47510.3
AT1G47510.1
5PTASE11
inositol polyphosphate 5-phosphatase 11
Chr4_+_13380409 3.82 AT4G26490.1
AT4G26490
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_-_23501416 3.80 AT5G58070.1
TIL
temperature-induced lipocalin
Chr5_-_6722477 3.79 AT5G19880.1
AT5G19880
Peroxidase superfamily protein
Chr3_+_1006780 3.79 AT3G03910.1
AT3G03910.2
GDH3
glutamate dehydrogenase 3
Chr2_-_9077048 3.79 AT2G21185.1
AT2G21185
transmembrane protein
Chr5_-_24501770 3.79 AT5G60900.1
RLK1
receptor-like protein kinase 1
Chr2_+_6758681 3.78 AT2G15480.2
UGT73B5
UDP-glucosyl transferase 73B5
Chr2_+_2457573 3.77 AT2G06255.1
ELF4-L3
ELF4-like 3
Chr3_+_458741 3.77 AT3G02290.5
AT3G02290.6
AT3G02290
RING/U-box superfamily protein
Chr1_-_10635581 3.76 AT1G30220.1
INT2
inositol transporter 2
Chr3_+_6926189 3.75 AT3G19910.1
AT3G19910.2
AT3G19910
RING/U-box superfamily protein
Chr4_+_5448049 3.75 AT4G08555.1
AT4G08555
hypothetical protein
Chr1_+_10214681 3.75 AT1G29230.1
CIPK18
CBL-interacting protein kinase 18
Chr3_+_458412 3.73 AT3G02290.3
AT3G02290.4
AT3G02290
RING/U-box superfamily protein
Chr3_+_17885465 3.73 AT3G48300.2
AT3G48300.1
CYP71A23
cytochrome P450, family 71, subfamily A, polypeptide 23
Chr1_-_9778043 3.71 AT1G28050.1
BBX13
B-box type zinc finger protein with CCT domain-containing protein
Chr5_-_7054281 3.69 AT5G20830.3
SUS1
sucrose synthase 1
Chr3_-_23040570 3.68 AT3G62260.2
AT3G62260.3
AT3G62260.1
AT3G62260
Protein phosphatase 2C family protein
Chr5_+_17816904 3.68 AT5G44240.2
AT5G44240.1
ALA2
aminophospholipid ATPase 2
Chr3_-_3414019 3.67 AT3G10910.1
AT3G10910
RING/U-box superfamily protein
Chr5_-_7054713 3.65 AT5G20830.1
SUS1
sucrose synthase 1
Chr2_+_17409370 3.64 AT2G41730.1
AT2G41730
calcium-binding site protein
Chr4_+_15243723 3.64 AT4G31410.1
AT4G31410.2
AT4G31410
E3 ubiquitin-protein ligase, putative (DUF1644)
Chr1_+_21676388 3.62 AT1G58360.1
AAP1
amino acid permease 1
Chr5_-_22133688 3.62 AT5G54510.1
DFL1
Auxin-responsive GH3 family protein
Chr5_+_23693259 3.62 AT5G58620.1
AT5G58620
zinc finger (CCCH-type) family protein
Chr3_+_16745873 3.62 AT3G45620.1
AT3G45620.2
AT3G45620
Transducin/WD40 repeat-like superfamily protein
Chr5_+_14992049 3.61 AT5G37740.2
AT5G37740
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr2_+_17360374 3.61 AT2G41640.1
AT2G41640.3
AT2G41640.2
AT2G41640
Glycosyltransferase family 61 protein
Chr5_-_7055398 3.60 AT5G20830.2
SUS1
sucrose synthase 1
Chr4_+_11456126 3.59 AT4G21534.1
AT4G21534.2
SPHK2
Diacylglycerol kinase family protein
Chr1_+_26817878 3.57 AT1G71110.1
AT1G71110
transmembrane protein
Chr1_-_1343793 3.56 AT1G04780.1
AT1G04780
Ankyrin repeat family protein
Chr5_-_18579241 3.55 AT5G45800.2
AT5G45800.1
MEE62
Leucine-rich repeat protein kinase family protein
Chr5_+_2154746 3.54 AT5G06960.1
AT5G06960.2
AT5G06960.3
OBF5
OCS-element binding factor 5
Chr4_-_18459257 3.51 AT4G39780.1
AT4G39780
Integrase-type DNA-binding superfamily protein
Chr3_-_1044678 3.51 AT3G04030.2
AT3G04030.5
AT3G04030.1
AT3G04030.3
MYR2
Homeodomain-like superfamily protein
Chr5_+_25794957 3.50 AT5G64530.1
AT5G64530.2
XND1
xylem NAC domain 1
Chr1_+_18407400 3.50 AT1G49740.1
AT1G49740
PLC-like phosphodiesterases superfamily protein
Chr1_-_436922 3.49 AT1G02230.1
NAC004
NAC domain containing protein 4
Chr4_-_17561975 3.47 AT4G37320.1
CYP81D5
cytochrome P450, family 81, subfamily D, polypeptide 5
Chr1_-_26550636 3.46 AT1G70440.1
AT1G70440.2
SRO3
similar to RCD one 3
Chr3_+_8295617 3.44 AT3G23240.1
ERF1
ethylene response factor 1
Chr3_+_18007098 3.42 AT3G48580.1
AT3G48580.2
AT3G48580.3
XTH11
xyloglucan endotransglucosylase/hydrolase 11
Chr5_+_26057814 3.42 AT5G65210.5
AT5G65210.3
TGA1
bZIP transcription factor family protein
Chr5_+_14991880 3.41 AT5G37740.1
AT5G37740
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr4_+_15244089 3.41 AT4G31410.3
AT4G31410
E3 ubiquitin-protein ligase, putative (DUF1644)
Chr1_-_26459570 3.40 AT1G70260.1
UMAMIT36
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_4544364 3.39 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
Chr1_+_18400003 3.39 AT1G49720.1
AT1G49720.2
AT1G49720.3
ABF1
abscisic acid responsive element-binding factor 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G53200

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.2 19.2 GO:0009413 response to flooding(GO:0009413)
3.0 8.9 GO:0010266 response to vitamin B1(GO:0010266)
2.8 8.3 GO:0015696 ammonium transport(GO:0015696)
2.6 7.8 GO:0071242 cellular response to ammonium ion(GO:0071242)
2.3 6.8 GO:0002215 defense response to nematode(GO:0002215)
2.2 6.7 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
2.2 8.8 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
2.2 8.6 GO:1902457 negative regulation of stomatal opening(GO:1902457)
2.1 6.2 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
2.0 8.0 GO:0010351 lithium ion transport(GO:0010351)
1.9 7.7 GO:0019477 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
1.9 5.6 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
1.8 5.5 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
1.8 10.8 GO:1900367 positive regulation of defense response to insect(GO:1900367)
1.7 5.1 GO:0009915 phloem sucrose loading(GO:0009915)
1.5 4.5 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
1.5 8.8 GO:0043090 amino acid import(GO:0043090)
1.4 4.3 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
1.4 4.3 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
1.4 4.1 GO:0015802 basic amino acid transport(GO:0015802)
1.3 4.0 GO:0043132 NAD transport(GO:0043132)
1.3 3.8 GO:0006883 cellular sodium ion homeostasis(GO:0006883) chloride ion homeostasis(GO:0055064)
1.2 11.0 GO:0051410 detoxification of nitrogen compound(GO:0051410)
1.2 19.2 GO:0006538 glutamate catabolic process(GO:0006538)
1.2 4.7 GO:0015720 allantoin transport(GO:0015720)
1.2 4.7 GO:0048480 stigma development(GO:0048480)
1.1 4.5 GO:0033306 phytol metabolic process(GO:0033306)
1.1 3.4 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
1.1 8.9 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
1.0 12.4 GO:0015749 monosaccharide transport(GO:0015749)
1.0 5.2 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
1.0 3.1 GO:0018065 protein-cofactor linkage(GO:0018065)
1.0 2.9 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
1.0 2.9 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.9 3.8 GO:0046068 cGMP biosynthetic process(GO:0006182) cGMP metabolic process(GO:0046068)
0.9 1.9 GO:2000068 regulation of defense response to insect(GO:2000068)
0.9 3.7 GO:0045332 phospholipid translocation(GO:0045332)
0.8 5.0 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.8 1.7 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.8 9.7 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.8 3.8 GO:0015846 polyamine transport(GO:0015846)
0.7 2.2 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.7 2.1 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.7 1.4 GO:0060919 auxin influx(GO:0060919)
0.7 4.8 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.7 4.6 GO:0009268 response to pH(GO:0009268)
0.6 6.2 GO:0007584 response to nutrient(GO:0007584)
0.6 1.8 GO:0060211 positive regulation of mRNA processing(GO:0050685) regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) positive regulation of mRNA catabolic process(GO:0061014) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.5 7.7 GO:1902074 response to salt(GO:1902074)
0.5 10.4 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.5 6.5 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.5 7.0 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.5 6.4 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.5 3.7 GO:0019632 shikimate metabolic process(GO:0019632)
0.5 2.1 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.5 1.6 GO:0010618 aerenchyma formation(GO:0010618)
0.5 1.6 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.5 5.5 GO:0045116 protein neddylation(GO:0045116)
0.5 7.5 GO:0043248 proteasome assembly(GO:0043248)
0.5 1.5 GO:1901562 response to paraquat(GO:1901562)
0.5 23.0 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.5 1.4 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.5 6.0 GO:0015693 magnesium ion transport(GO:0015693)
0.5 1.4 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.5 1.4 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.5 3.6 GO:0009061 anaerobic respiration(GO:0009061)
0.5 4.1 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.4 3.1 GO:0006552 leucine catabolic process(GO:0006552)
0.4 2.7 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.4 2.6 GO:0080187 floral organ senescence(GO:0080187)
0.4 8.6 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.4 2.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.4 1.3 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.4 1.7 GO:0035494 SNARE complex disassembly(GO:0035494)
0.4 3.8 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.4 1.7 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.4 2.4 GO:0090202 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.4 0.8 GO:0000256 allantoin catabolic process(GO:0000256)
0.4 1.2 GO:0048451 petal formation(GO:0048451)
0.4 1.2 GO:0009590 detection of gravity(GO:0009590)
0.4 2.7 GO:0009745 sucrose mediated signaling(GO:0009745)
0.4 2.7 GO:1904482 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.4 1.2 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.4 1.9 GO:0046398 UDP-glucuronate metabolic process(GO:0046398)
0.4 2.3 GO:0006567 threonine catabolic process(GO:0006567)
0.4 1.9 GO:0034497 protein localization to pre-autophagosomal structure(GO:0034497)
0.4 2.3 GO:0031929 TOR signaling(GO:0031929)
0.4 3.7 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.4 3.7 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.4 1.5 GO:0042256 mature ribosome assembly(GO:0042256)
0.4 3.2 GO:0010555 response to mannitol(GO:0010555)
0.4 1.1 GO:1900369 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.3 4.5 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.3 2.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.3 4.8 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.3 1.0 GO:0006004 fucose metabolic process(GO:0006004)
0.3 2.3 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.3 1.6 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.3 1.9 GO:0009303 rRNA transcription(GO:0009303)
0.3 2.5 GO:0031222 arabinan catabolic process(GO:0031222)
0.3 4.4 GO:0080036 regulation of cytokinin-activated signaling pathway(GO:0080036)
0.3 4.7 GO:0015770 sucrose transport(GO:0015770)
0.3 4.3 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.3 4.6 GO:0006814 sodium ion transport(GO:0006814)
0.3 5.8 GO:0010030 positive regulation of seed germination(GO:0010030)
0.3 2.7 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
0.3 3.8 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.3 4.1 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.3 2.6 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.3 2.9 GO:0048317 seed morphogenesis(GO:0048317)
0.3 3.1 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.3 0.8 GO:0035436 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.3 2.3 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.3 11.2 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.3 1.7 GO:0043066 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.3 4.2 GO:0009901 anther dehiscence(GO:0009901)
0.3 4.4 GO:0009750 response to fructose(GO:0009750)
0.3 10.6 GO:0032200 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.3 2.7 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.3 2.2 GO:0072659 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.3 4.0 GO:0031053 primary miRNA processing(GO:0031053)
0.3 2.6 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.3 4.7 GO:0071545 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.3 1.5 GO:0055078 sodium ion homeostasis(GO:0055078)
0.2 1.2 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.2 0.7 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.2 8.4 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.2 1.5 GO:0048863 stem cell differentiation(GO:0048863)
0.2 7.8 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.2 5.2 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.2 1.6 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000479)
0.2 0.7 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.2 2.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.2 1.3 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.2 7.4 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.2 4.4 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.2 4.2 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.2 4.4 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.2 5.7 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.2 4.2 GO:0051260 protein homooligomerization(GO:0051260)
0.2 2.0 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.2 4.1 GO:0050821 protein stabilization(GO:0050821)
0.2 3.2 GO:0046688 response to copper ion(GO:0046688)
0.2 0.9 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.2 12.1 GO:0042538 hyperosmotic salinity response(GO:0042538)
0.2 0.8 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.2 2.9 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.2 2.3 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.2 1.9 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.2 0.8 GO:0009560 embryo sac egg cell differentiation(GO:0009560)
0.2 3.2 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.2 0.8 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.2 7.3 GO:0006813 potassium ion transport(GO:0006813)
0.2 0.8 GO:1990428 miRNA transport(GO:1990428)
0.2 1.1 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.2 2.4 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.2 2.0 GO:0006513 protein monoubiquitination(GO:0006513)
0.2 1.6 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.2 0.7 GO:0019377 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.2 1.8 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 3.3 GO:0071218 response to misfolded protein(GO:0051788) cellular response to misfolded protein(GO:0071218)
0.2 0.5 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.2 1.7 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.2 1.2 GO:0051014 actin filament severing(GO:0051014)
0.2 0.8 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 0.3 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.2 0.5 GO:0030638 polyketide metabolic process(GO:0030638)
0.2 2.5 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.2 2.7 GO:0000266 mitochondrial fission(GO:0000266)
0.2 1.1 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.2 0.6 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.2 7.7 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.2 4.2 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.2 1.8 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 2.1 GO:0006574 valine catabolic process(GO:0006574)
0.1 0.6 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.1 2.5 GO:0006378 mRNA polyadenylation(GO:0006378)
0.1 4.6 GO:0009625 response to insect(GO:0009625)
0.1 0.8 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.1 3.9 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1 26.4 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 1.9 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 5.2 GO:0006334 nucleosome assembly(GO:0006334)
0.1 0.7 GO:0010601 positive regulation of auxin biosynthetic process(GO:0010601)
0.1 1.2 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 1.2 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 1.7 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 0.1 GO:0000301 retrograde transport, vesicle recycling within Golgi(GO:0000301)
0.1 0.6 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.1 1.6 GO:0006972 hyperosmotic response(GO:0006972)
0.1 0.9 GO:0097034 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 3.7 GO:0009626 plant-type hypersensitive response(GO:0009626) host programmed cell death induced by symbiont(GO:0034050)
0.1 1.7 GO:0010187 negative regulation of seed germination(GO:0010187)
0.1 1.2 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.1 0.4 GO:0006097 glyoxylate cycle(GO:0006097) glyoxylate metabolic process(GO:0046487)
0.1 2.4 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.6 GO:0050777 negative regulation of immune response(GO:0050777)
0.1 2.1 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 8.3 GO:0000209 protein polyubiquitination(GO:0000209)
0.1 1.3 GO:0097354 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.1 3.5 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.1 3.7 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 4.4 GO:0043067 regulation of programmed cell death(GO:0043067)
0.1 5.9 GO:0009566 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.1 0.8 GO:0006089 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 0.4 GO:0015739 sialic acid transport(GO:0015739)
0.1 1.3 GO:0070585 protein targeting to mitochondrion(GO:0006626) protein localization to mitochondrion(GO:0070585) establishment of protein localization to mitochondrion(GO:0072655)
0.1 7.5 GO:0016579 protein deubiquitination(GO:0016579)
0.1 6.8 GO:0010200 response to chitin(GO:0010200)
0.1 2.7 GO:0016575 histone deacetylation(GO:0016575)
0.1 3.1 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 1.4 GO:0010048 vernalization response(GO:0010048)
0.1 1.1 GO:0009089 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.1 1.1 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 5.6 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.1 1.9 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.1 2.0 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.1 0.3 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 2.1 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.1 1.4 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 1.0 GO:0000103 sulfate assimilation(GO:0000103)
0.1 3.6 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.1 0.9 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.1 1.2 GO:0033750 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.1 0.7 GO:0043966 histone H3 acetylation(GO:0043966)
0.1 8.5 GO:0006486 protein glycosylation(GO:0006486) macromolecule glycosylation(GO:0043413)
0.1 2.1 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.1 0.5 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.1 28.8 GO:0016567 protein ubiquitination(GO:0016567)
0.1 2.0 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.1 0.3 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.1 0.4 GO:1902170 cellular response to nitrate(GO:0071249) cellular response to reactive nitrogen species(GO:1902170)
0.1 1.5 GO:1900673 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.1 9.3 GO:0048868 pollen tube development(GO:0048868)
0.1 6.2 GO:0009845 seed germination(GO:0009845)
0.1 2.5 GO:0006906 vesicle fusion(GO:0006906)
0.1 2.3 GO:0009853 photorespiration(GO:0009853)
0.1 1.0 GO:0010227 floral organ abscission(GO:0010227)
0.1 1.0 GO:0002098 tRNA wobble uridine modification(GO:0002098) tRNA methylation(GO:0030488)
0.0 1.6 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 3.4 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.5 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.0 0.6 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 0.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.3 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.5 GO:0048829 root cap development(GO:0048829)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 5.9 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 2.3 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 1.1 GO:0009668 plastid membrane organization(GO:0009668) thylakoid membrane organization(GO:0010027)
0.0 2.7 GO:0022900 electron transport chain(GO:0022900)
0.0 0.6 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.1 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.0 3.8 GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process(GO:0043161)
0.0 0.6 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 1.3 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.5 GO:1900864 mitochondrial mRNA modification(GO:0080156) mitochondrial RNA modification(GO:1900864)
0.0 0.4 GO:0008361 regulation of cell size(GO:0008361)
0.0 1.0 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.5 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.0 0.0 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.0 2.5 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 0.2 GO:0007030 Golgi organization(GO:0007030)
0.0 0.3 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.0 0.6 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.5 GO:2000280 regulation of root development(GO:2000280)
0.0 0.4 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.0 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.0 0.1 GO:0010540 basipetal auxin transport(GO:0010540)
0.0 0.6 GO:0009624 response to nematode(GO:0009624)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.8 GO:0031080 nuclear pore outer ring(GO:0031080)
0.9 5.4 GO:0055038 recycling endosome membrane(GO:0055038)
0.9 16.5 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.9 4.3 GO:0035861 site of double-strand break(GO:0035861)
0.9 7.7 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.7 2.2 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.6 3.9 GO:0005776 autophagosome(GO:0005776)
0.6 1.7 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.5 2.9 GO:0045240 dihydrolipoyl dehydrogenase complex(GO:0045240)
0.5 1.9 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.4 4.0 GO:0010445 nuclear dicing body(GO:0010445)
0.4 5.3 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.4 10.6 GO:0000781 chromosome, telomeric region(GO:0000781)
0.4 5.9 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.4 3.7 GO:0071256 translocon complex(GO:0071256)
0.4 1.2 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.4 2.6 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.4 5.0 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.4 4.3 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.3 4.5 GO:0000124 SAGA complex(GO:0000124)
0.3 1.2 GO:0005655 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.3 3.1 GO:0008180 COP9 signalosome(GO:0008180)
0.3 1.9 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.3 2.1 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.3 1.3 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.3 2.3 GO:0089701 U2AF(GO:0089701)
0.3 10.6 GO:0005764 lysosome(GO:0005764)
0.2 0.9 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.2 1.4 GO:0070552 BRISC complex(GO:0070552)
0.2 1.9 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.2 1.6 GO:0016363 nuclear matrix(GO:0016363)
0.2 2.5 GO:0098799 outer mitochondrial membrane protein complex(GO:0098799)
0.2 2.2 GO:0031355 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.2 2.4 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.2 2.1 GO:0030014 CCR4-NOT complex(GO:0030014)
0.2 2.9 GO:0005880 nuclear microtubule(GO:0005880)
0.2 1.4 GO:0030897 HOPS complex(GO:0030897)
0.2 3.9 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.2 2.9 GO:0000786 nucleosome(GO:0000786)
0.2 1.1 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.2 1.1 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.2 1.6 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.2 1.0 GO:0044545 NSL complex(GO:0044545)
0.2 1.7 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.2 1.5 GO:0005677 chromatin silencing complex(GO:0005677)
0.2 0.6 GO:0034715 pICln-Sm protein complex(GO:0034715) SMN-Sm protein complex(GO:0034719)
0.2 1.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.2 11.2 GO:0005615 extracellular space(GO:0005615)
0.2 3.0 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.1 0.4 GO:0009514 glyoxysome(GO:0009514)
0.1 1.6 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 15.6 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.1 0.4 GO:0005652 nuclear lamina(GO:0005652)
0.1 6.2 GO:0016592 mediator complex(GO:0016592)
0.1 1.9 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 1.2 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.1 0.7 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.1 4.0 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.1 1.8 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.1 1.9 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 0.6 GO:0031351 intrinsic component of plastid membrane(GO:0031350) integral component of plastid membrane(GO:0031351)
0.1 5.3 GO:0031201 SNARE complex(GO:0031201)
0.1 8.2 GO:0005887 integral component of plasma membrane(GO:0005887)
0.1 8.4 GO:0000139 Golgi membrane(GO:0000139)
0.1 0.5 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.1 5.8 GO:0090406 pollen tube(GO:0090406)
0.1 1.4 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 1.8 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 1.5 GO:0005771 multivesicular body(GO:0005771)
0.1 0.4 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 4.0 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 1.6 GO:0000118 histone deacetylase complex(GO:0000118)
0.1 0.5 GO:0005787 signal peptidase complex(GO:0005787)
0.1 4.5 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 0.7 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.1 3.0 GO:0016607 nuclear speck(GO:0016607)
0.1 5.0 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 1.1 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 1.6 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 1.1 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 1.9 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 2.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 1.5 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.9 GO:0016604 nuclear body(GO:0016604)
0.0 8.8 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.0 12.8 GO:0005774 vacuolar membrane(GO:0005774)
0.0 0.8 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.6 GO:0070069 cytochrome complex(GO:0070069)
0.0 0.6 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.2 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 4.7 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 1.8 GO:0005635 nuclear envelope(GO:0005635)
0.0 1.0 GO:0005768 endosome(GO:0005768)
0.0 18.1 GO:0005794 Golgi apparatus(GO:0005794)
0.0 1.7 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.3 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.3 GO:0071004 U2-type prespliceosome(GO:0071004) prespliceosome(GO:0071010)
0.0 126.4 GO:0005634 nucleus(GO:0005634)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.8 8.3 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
2.2 8.8 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
2.1 6.2 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
2.0 5.9 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
1.9 7.7 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
1.9 5.6 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
1.8 11.0 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
1.6 8.1 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
1.6 17.8 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
1.5 15.4 GO:0004351 glutamate decarboxylase activity(GO:0004351)
1.4 4.3 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
1.3 8.0 GO:0015369 calcium:proton antiporter activity(GO:0015369)
1.3 6.5 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
1.2 3.6 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
1.2 3.6 GO:0008481 sphinganine kinase activity(GO:0008481)
1.1 8.9 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
1.1 5.5 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
1.1 3.2 GO:0019788 NEDD8 transferase activity(GO:0019788)
1.0 3.1 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
1.0 11.3 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
1.0 4.9 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.9 3.8 GO:0004352 glutamate dehydrogenase (NAD+) activity(GO:0004352)
0.9 10.4 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.9 4.7 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.8 5.0 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.8 4.7 GO:0005274 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.8 3.1 GO:0016531 copper chaperone activity(GO:0016531)
0.8 3.9 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.8 8.4 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.8 6.9 GO:0008131 primary amine oxidase activity(GO:0008131)
0.8 3.8 GO:0005366 myo-inositol transmembrane transporter activity(GO:0005365) myo-inositol:proton symporter activity(GO:0005366) polyol transmembrane transporter activity(GO:0015166)
0.7 3.7 GO:0004765 shikimate kinase activity(GO:0004765)
0.7 2.2 GO:0004774 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.7 2.2 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.7 2.2 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.7 2.9 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.6 10.9 GO:0016157 sucrose synthase activity(GO:0016157)
0.6 3.7 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.6 3.1 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.6 3.1 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.6 3.0 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.6 2.3 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.6 2.9 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.6 2.9 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.6 5.5 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.5 3.8 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.5 3.6 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.5 7.6 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.5 7.0 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.5 1.5 GO:0016530 metallochaperone activity(GO:0016530)
0.5 2.5 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.5 5.9 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.5 6.7 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.5 3.8 GO:0004383 guanylate cyclase activity(GO:0004383)
0.5 2.3 GO:0004594 pantothenate kinase activity(GO:0004594)
0.5 2.3 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.5 2.3 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.5 10.0 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.5 4.1 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.5 5.9 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.4 11.2 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.4 3.1 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.4 2.6 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.4 6.0 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.4 1.7 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.4 4.6 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.4 2.0 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.4 1.2 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.4 1.6 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.4 2.7 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.4 2.7 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.4 0.8 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.4 3.7 GO:0035198 miRNA binding(GO:0035198)
0.4 1.1 GO:0001054 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.3 3.1 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.3 3.3 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.3 11.2 GO:0005179 hormone activity(GO:0005179)
0.3 2.9 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.3 4.2 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.3 15.9 GO:0017137 Rab GTPase binding(GO:0017137)
0.3 1.6 GO:0034511 U3 snoRNA binding(GO:0034511)
0.3 1.2 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.3 2.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.3 4.7 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.3 4.3 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.3 0.8 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.3 1.7 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.3 0.8 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.3 18.5 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.3 1.0 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.3 1.0 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.3 1.3 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.2 1.2 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.2 1.0 GO:0004031 aldehyde oxidase activity(GO:0004031)
0.2 1.7 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.2 1.7 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.2 0.7 GO:0004560 alpha-L-fucosidase activity(GO:0004560)
0.2 6.0 GO:0016597 amino acid binding(GO:0016597)
0.2 1.6 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.2 12.1 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.2 1.3 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.2 8.2 GO:0005096 GTPase activator activity(GO:0005096)
0.2 1.3 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.2 7.0 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.2 1.7 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 2.1 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.2 3.1 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.2 0.8 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.2 0.8 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.2 2.3 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.2 1.7 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.2 0.6 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.2 2.7 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.2 0.7 GO:0004348 glucosylceramidase activity(GO:0004348)
0.2 1.9 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.2 8.0 GO:0003713 transcription coactivator activity(GO:0003713)
0.2 3.9 GO:0016790 thiolester hydrolase activity(GO:0016790)
0.2 2.2 GO:0008536 Ran GTPase binding(GO:0008536)
0.2 1.7 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.2 2.1 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.2 4.8 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.2 1.1 GO:0001671 ATPase activator activity(GO:0001671)
0.2 1.8 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.1 1.6 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.1 5.8 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.1 2.2 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 1.5 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 1.2 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 1.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.7 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 2.0 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 0.6 GO:0043855 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) intracellular cGMP activated cation channel activity(GO:0005223) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.1 0.9 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 3.1 GO:0010427 abscisic acid binding(GO:0010427)
0.1 0.9 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 3.7 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.6 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 37.8 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.1 8.3 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.1 1.2 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.8 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 1.4 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 1.5 GO:0016208 AMP binding(GO:0016208)
0.1 2.0 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 8.7 GO:0004601 peroxidase activity(GO:0004601)
0.1 3.9 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.1 2.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.5 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.4 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 12.7 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 10.7 GO:0046982 protein heterodimerization activity(GO:0046982)
0.1 1.5 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.5 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 4.5 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 0.3 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 1.5 GO:0035064 methylated histone binding(GO:0035064)
0.1 8.3 GO:0005216 ion channel activity(GO:0005216)
0.1 0.8 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 2.8 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.1 4.6 GO:0016831 carboxy-lyase activity(GO:0016831)
0.1 4.7 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.1 0.6 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 1.1 GO:0008143 poly(A) binding(GO:0008143)
0.1 1.3 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 0.8 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 1.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.6 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 3.6 GO:0005484 SNAP receptor activity(GO:0005484)
0.1 3.5 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.1 1.3 GO:0019902 phosphatase binding(GO:0019902)
0.1 1.0 GO:0097602 cullin family protein binding(GO:0097602)
0.1 0.8 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 2.1 GO:0033558 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.1 4.5 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 0.7 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 3.2 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 6.8 GO:0005525 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.1 0.3 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.1 5.9 GO:0003682 chromatin binding(GO:0003682)
0.1 1.7 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 2.5 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.4 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.0 0.4 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 1.8 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 2.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.6 GO:0008235 metalloexopeptidase activity(GO:0008235)
0.0 24.4 GO:0000975 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 0.7 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.5 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 2.8 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.4 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.5 GO:0017069 snRNA binding(GO:0017069)
0.0 0.8 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 0.6 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.0 40.6 GO:0001071 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 1.0 GO:0000049 tRNA binding(GO:0000049)
0.0 5.3 GO:0005516 calmodulin binding(GO:0005516)
0.0 2.5 GO:0051015 actin filament binding(GO:0051015)
0.0 1.0 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.2 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0 1.1 GO:0019900 kinase binding(GO:0019900)
0.0 0.7 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.0 GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor(GO:0016635)
0.0 0.5 GO:0008266 poly-pyrimidine tract binding(GO:0008187) poly(U) RNA binding(GO:0008266)
0.0 0.9 GO:0003684 damaged DNA binding(GO:0003684)
0.0 0.1 GO:0033862 UMP kinase activity(GO:0033862)
0.0 1.1 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.6 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 7.3 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 2.3 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.7 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.9 GO:0043565 sequence-specific DNA binding(GO:0043565)
0.0 0.5 GO:0005048 signal sequence binding(GO:0005048)
0.0 0.1 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.8 GO:0003924 GTPase activity(GO:0003924)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 5.5 PID AURORA A PATHWAY Aurora A signaling
1.2 3.6 PID IL12 2PATHWAY IL12-mediated signaling events
1.1 4.5 PID PLK1 PATHWAY PLK1 signaling events
1.0 4.0 PID INTEGRIN A9B1 PATHWAY Alpha9 beta1 integrin signaling events
0.3 2.4 PID CDC42 PATHWAY CDC42 signaling events
0.1 0.4 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.1 0.3 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.1 0.3 PID BARD1 PATHWAY BARD1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 3.6 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
1.2 4.7 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
0.7 4.0 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.5 3.2 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
0.4 3.4 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.4 1.2 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.4 2.3 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.3 1.7 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.2 2.0 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.2 1.3 REACTOME GLUCOSE METABOLISM Genes involved in Glucose metabolism
0.2 0.8 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 1.2 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.2 1.3 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.2 2.3 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.1 1.2 REACTOME DNA REPAIR Genes involved in DNA Repair