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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G52440

Z-value: 1.07

Transcription factors associated with AT3G52440

Gene Symbol Gene ID Gene Info
AT3G52440 Dof-type zinc finger DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT3G52440arTal_v1_Chr3_+_19435447_194354470.366.3e-02Click!

Activity profile of AT3G52440 motif

Sorted Z-values of AT3G52440 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_4312103 5.20 AT2G10940.2
AT2G10940.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_29635931 4.22 AT1G78820.1
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr1_-_24606722 4.09 AT1G66100.1
Plant thionin
Chr5_-_9082384 4.01 AT5G26000.1
AT5G26000.2
thioglucoside glucohydrolase 1
Chr4_-_17777445 3.95 AT4G37800.1
xyloglucan endotransglucosylase/hydrolase 7
Chr5_-_25343369 3.53 AT5G63180.1
Pectin lyase-like superfamily protein
Chr1_-_4394343 3.49 AT1G12900.3
AT1G12900.4
AT1G12900.1
AT1G12900.2
AT1G12900.5
glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Chr1_+_10375754 3.48 AT1G29670.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_10375599 3.43 AT1G29670.2
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_21523375 3.35 AT3G58120.2
AT3G58120.1
Basic-leucine zipper (bZIP) transcription factor family protein
Chr1_+_28053030 3.34 AT1G74670.1
Gibberellin-regulated family protein
Chr1_+_10371675 3.18 AT1G29660.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_27338034 3.16 AT1G72600.2
AT1G72600.1
hydroxyproline-rich glycoprotein family protein
Chr1_+_26141726 2.74 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
expansin A1
Chr3_-_1860797 2.67 AT3G06145.1
RING zinc finger protein
Chr4_-_7857933 2.66 AT4G13500.1
transmembrane protein
Chr5_-_22560461 2.64 AT5G55730.2
AT5G55730.1
FASCICLIN-like arabinogalactan 1
Chr1_-_1043887 2.60 AT1G04040.1
HAD superfamily, subfamily IIIB acid phosphatase
Chr3_+_6510982 2.58 AT3G18890.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_907523 2.54 AT1G03630.1
AT1G03630.2
protochlorophyllide oxidoreductase C
Chr5_+_3889906 2.49 AT5G12050.1
rho GTPase-activating protein
Chr3_-_19139423 2.49 AT3G51600.1
lipid transfer protein 5
Chr5_-_25373904 2.46 AT5G63310.1
nucleoside diphosphate kinase 2
Chr1_+_17918207 2.41 AT1G48480.1
receptor-like kinase 1
Chr1_-_26468703 2.40 AT1G70280.1
AT1G70280.2
NHL domain-containing protein
Chr4_-_12772438 2.39 AT4G24780.1
AT4G24780.2
Pectin lyase-like superfamily protein
Chr1_+_7252111 2.37 AT1G20850.1
xylem cysteine peptidase 2
Chr3_-_2334185 2.37 AT3G07320.1
O-Glycosyl hydrolases family 17 protein
Chr1_+_24778257 2.36 AT1G66430.1
pfkB-like carbohydrate kinase family protein
Chr5_-_8916856 2.36 AT5G25610.1
BURP domain-containing protein
Chr1_-_84864 2.35 AT1G01190.1
AT1G01190.2
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr1_+_25401514 2.34 AT1G67750.1
Pectate lyase family protein
Chr4_-_16583075 2.33 AT4G34760.1
SAUR-like auxin-responsive protein family
Chr1_+_9421009 2.32 AT1G27120.1
AT1G27120.2
Galactosyltransferase family protein
Chr3_+_18049571 2.30 AT3G48730.1
glutamate-1-semialdehyde 2,1-aminomutase 2
Chr3_+_6180621 2.28 AT3G18050.1
GPI-anchored protein
Chr4_+_16810482 2.24 AT4G35350.2
AT4G35350.1
xylem cysteine peptidase 1
Chr5_+_4944816 2.23 AT5G15230.1
GAST1 protein homolog 4
Chr4_-_13398307 2.19 AT4G26540.1
Leucine-rich repeat receptor-like protein kinase family protein
Chr1_+_4899045 2.17 AT1G14345.1
NAD(P)-linked oxidoreductase superfamily protein
Chr5_-_20712386 2.16 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_2097106 2.15 AT1G06830.1
Glutaredoxin family protein
Chr5_-_24990331 2.14 AT5G62220.1
glycosyltransferase 18
Chr3_+_2563803 2.12 AT3G08030.1
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr3_+_19845097 2.11 AT3G53530.2
AT3G53530.1
Chloroplast-targeted copper chaperone protein
Chr3_+_2564153 2.10 AT3G08030.2
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr3_-_15617149 2.09 AT3G43720.2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_15617309 2.07 AT3G43720.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_227302 2.06 AT1G01620.2
plasma membrane intrinsic protein 1C
Chr1_-_227543 2.05 AT1G01620.1
plasma membrane intrinsic protein 1C
Chr2_+_14427509 2.05 AT2G34170.3
AT2G34170.2
AT2G34170.1
AT2G34170.4
AT2G34170.5
AT2G34170.6
hypothetical protein (DUF688)
Chr2_-_19563960 2.05 AT2G47750.1
putative indole-3-acetic acid-amido synthetase GH3.9
Chr1_+_23911024 2.04 AT1G64390.1
glycosyl hydrolase 9C2
Chr1_+_2047886 2.04 AT1G06680.2
photosystem II subunit P-1
Chr1_+_2047634 2.03 AT1G06680.1
photosystem II subunit P-1
Chr5_+_4945062 2.03 AT5G15230.2
GAST1 protein homolog 4
Chr4_+_15819489 2.03 AT4G32800.1
Integrase-type DNA-binding superfamily protein
Chr2_-_7496292 2.00 AT2G17230.1
EXORDIUM like 5
Chr3_-_19553092 1.98 AT3G52750.3
AT3G52750.1
AT3G52750.4
Tubulin/FtsZ family protein
Chr3_-_4063306 1.96 AT3G12780.1
phosphoglycerate kinase 1
Chr3_-_3277930 1.96 AT3G10520.1
hemoglobin 2
Chr4_-_17181261 1.96 AT4G36360.2
beta-galactosidase 3
Chr4_+_14677661 1.95 AT4G30020.2
AT4G30020.3
PA-domain containing subtilase family protein
Chr2_+_15335284 1.95 AT2G36570.1
Leucine-rich repeat protein kinase family protein
Chr4_-_17181466 1.95 AT4G36360.1
beta-galactosidase 3
Chr1_+_25374072 1.93 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
multidrug resistance protein
Chr1_+_20101299 1.93 AT1G53840.1
pectin methylesterase 1
Chr5_+_1952505 1.93 AT5G06390.1
FASCICLIN-like arabinogalactan protein 17 precursor
Chr2_-_11214662 1.92 AT2G26330.1
Leucine-rich receptor-like protein kinase family protein
Chr2_+_11550705 1.92 AT2G27060.1
AT2G27060.2
AT2G27060.3
Leucine-rich repeat protein kinase family protein
Chr5_+_26151333 1.92 AT5G65440.5
AT5G65440.4
AT5G65440.2
AT5G65440.1
AT5G65440.3
AT5G65440.7
AT5G65440.9
AT5G65440.8
AT5G65440.6
transmembrane protein
Chr4_+_10651744 1.91 AT4G19530.1
AT4G19530.2
disease resistance protein (TIR-NBS-LRR class) family
Chr5_-_13911225 1.91 AT5G35740.1
Carbohydrate-binding X8 domain superfamily protein
Chr1_+_7696427 1.91 AT1G21910.1
Integrase-type DNA-binding superfamily protein
Chr3_-_7187521 1.90 AT3G20570.1
early nodulin-like protein 9
Chr3_-_6436046 1.89 AT3G18710.1
plant U-box 29
Chr5_-_7419335 1.89 AT5G22390.1
FANTASTIC four-like protein (DUF3049)
Chr3_-_8902835 1.89 AT3G24480.1
Leucine-rich repeat (LRR) family protein
Chr1_+_11396402 1.88 AT1G31800.1
cytochrome P450, family 97, subfamily A, polypeptide 3
Chr5_-_671687 1.86 AT5G02890.1
HXXXD-type acyl-transferase family protein
Chr5_-_18371021 1.86 AT5G45340.2
AT5G45340.1
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr4_-_18067873 1.86 AT4G38660.2
Pathogenesis-related thaumatin superfamily protein
Chr1_-_11872926 1.86 AT1G32780.1
GroES-like zinc-binding dehydrogenase family protein
Chr1_-_30113489 1.86 AT1G80050.2
adenine phosphoribosyl transferase 2
Chr5_-_3190321 1.85 AT5G10170.1
myo-inositol-1-phosphate synthase 3
Chr4_-_7587099 1.85 AT4G12970.1
stomagen
Chr1_+_29413874 1.85 AT1G78170.1
E3 ubiquitin-protein ligase
Chr1_+_27452748 1.84 AT1G72970.1
AT1G72970.2
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr4_+_8925571 1.84 AT4G15660.1
Thioredoxin superfamily protein
Chr5_-_18588792 1.84 AT5G45820.1
CBL-interacting protein kinase 20
Chr4_-_18068293 1.83 AT4G38660.1
Pathogenesis-related thaumatin superfamily protein
Chr3_+_6266946 1.82 AT3G18280.2
AT3G18280.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_489467 1.80 AT3G02380.1
CONSTANS-like 2
Chr5_+_22474142 1.80 AT5G55480.1
SHV3-like 1
Chr5_+_6387341 1.80 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
Heavy metal transport/detoxification superfamily protein
Chr1_+_5249760 1.79 AT1G15260.1
LOW protein: ATP-dependent RNA helicase-like protein
Chr4_+_9906821 1.79 AT4G17810.1
AT4G17810.2
C2H2 and C2HC zinc fingers superfamily protein
Chr5_+_13830429 1.79 AT5G35630.1
glutamine synthetase 2
Chr4_-_11885533 1.79 AT4G22570.2
AT4G22570.1
adenine phosphoribosyl transferase 3
Chr5_+_1130031 1.78 AT5G04140.2
glutamate synthase 1
Chr5_+_1129785 1.78 AT5G04140.1
glutamate synthase 1
Chr1_-_11548016 1.78 AT1G32100.1
pinoresinol reductase 1
Chr2_-_332781 1.78 AT2G01755.1
AT2G01755.2
hypothetical protein
Chr2_+_18691664 1.77 AT2G45340.1
Leucine-rich repeat protein kinase family protein
Chr5_+_13831020 1.77 AT5G35630.2
glutamine synthetase 2
Chr3_-_6855513 1.77 AT3G19720.3
AT3G19720.2
AT3G19720.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_13830746 1.77 AT5G35630.3
glutamine synthetase 2
Chr3_+_11252807 1.77 AT3G29320.1
Glycosyl transferase, family 35
Chr1_-_28581315 1.77 AT1G76160.1
SKU5 similar 5
Chr2_-_13020311 1.76 AT2G30570.1
photosystem II reaction center W
Chr1_+_18802552 1.76 AT1G50732.1
transmembrane protein
Chr4_+_16357421 1.76 AT4G34160.1
CYCLIN D3;1
Chr5_+_7778017 1.75 AT5G23120.2
AT5G23120.1
photosystem II stability/assembly factor, chloroplast (HCF136)
Chr1_-_30114010 1.73 AT1G80050.1
adenine phosphoribosyl transferase 2
Chr4_+_14678096 1.73 AT4G30020.4
PA-domain containing subtilase family protein
Chr4_+_16708552 1.73 AT4G35100.2
plasma membrane intrinsic protein 3
Chr4_+_16708361 1.72 AT4G35100.1
plasma membrane intrinsic protein 3
Chr5_+_463073 1.72 AT5G02260.1
expansin A9
Chr1_-_25649254 1.72 AT1G68400.1
leucine-rich repeat transmembrane protein kinase family protein
Chr1_+_6942625 1.70 AT1G20020.1
AT1G20020.2
AT1G20020.3
ferredoxin-NADP[+]-oxidoreductase 2
Chr4_+_14192569 1.70 AT4G28720.1
Flavin-binding monooxygenase family protein
Chr5_+_5431584 1.70 AT5G16590.1
Leucine-rich repeat protein kinase family protein
Chr4_-_15312987 1.70 AT4G31590.1
Cellulose-synthase-like C5
Chr1_+_28498821 1.69 AT1G75900.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_19552872 1.68 AT3G52750.2
Tubulin/FtsZ family protein
Chr1_-_2972334 1.68 AT1G09200.1
Histone superfamily protein
Chr3_+_5934033 1.67 AT3G17350.1
AT3G17350.2
wall-associated receptor kinase carboxy-terminal protein
Chr4_+_14944129 1.66 AT4G30610.1
alpha/beta-Hydrolases superfamily protein
Chr1_-_26765285 1.65 AT1G70985.1
hydroxyproline-rich glycoprotein family protein
Chr3_-_10877578 1.64 AT3G28860.1
ATP binding cassette subfamily B19
Chr3_-_1855063 1.64 AT3G06130.2
AT3G06130.1
Heavy metal transport/detoxification superfamily protein
Chr4_+_8883825 1.64 AT4G15560.1
Deoxyxylulose-5-phosphate synthase
Chr3_-_6980523 1.63 AT3G20015.1
Eukaryotic aspartyl protease family protein
Chr2_+_6399621 1.63 AT2G14890.2
arabinogalactan protein 9
Chr2_-_10304812 1.63 AT2G24230.1
Leucine-rich repeat protein kinase family protein
Chr5_-_13959830 1.63 AT5G35790.1
glucose-6-phosphate dehydrogenase 1
Chr1_+_19879405 1.63 AT1G53300.1
tetratricopetide-repeat thioredoxin-like 1
Chr4_+_14677141 1.62 AT4G30020.1
PA-domain containing subtilase family protein
Chr2_-_14125526 1.62 AT2G33330.1
plasmodesmata-located protein 3
Chr5_-_3728726 1.61 AT5G11590.1
Integrase-type DNA-binding superfamily protein
Chr2_+_2322215 1.61 AT2G05990.1
AT2G05990.2
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_29352946 1.61 AT1G78060.1
Glycosyl hydrolase family protein
Chr4_-_18160158 1.60 AT4G38950.2
AT4G38950.1
AT4G38950.3
ATP binding microtubule motor family protein
Chr2_-_18443405 1.60 AT2G44740.1
cyclin p4;1
Chr5_-_7652714 1.60 AT5G22880.1
histone B2
Chr5_-_9242854 1.59 AT5G26330.1
Cupredoxin superfamily protein
Chr1_+_21159736 1.58 AT1G56500.2
AT1G56500.1
AT1G56500.3
haloacid dehalogenase-like hydrolase family protein
Chr3_+_19713799 1.57 AT3G53190.1
Pectin lyase-like superfamily protein
Chr4_+_17643110 1.57 AT4G37550.4
AT4G37550.1
AT4G37550.2
Acetamidase/Formamidase family protein
Chr5_-_14199431 1.57 AT5G36120.1
cofactor assembly, complex C (B6F)
Chr1_-_1307973 1.57 AT1G04680.1
Pectin lyase-like superfamily protein
Chr3_+_9813223 1.56 AT3G26710.1
cofactor assembly of complex C
Chr3_-_22881775 1.56 AT3G61820.1
Eukaryotic aspartyl protease family protein
Chr3_+_2612175 1.56 AT3G08600.1
transmembrane protein, putative (DUF1191)
Chr5_+_4341262 1.56 AT5G13510.1
Ribosomal protein L10 family protein
Chr5_-_20532856 1.55 AT5G50420.1
O-fucosyltransferase family protein
Chr3_+_19613078 1.55 AT3G52900.1
RAB6-interacting golgin (DUF662)
Chr3_+_21109414 1.55 AT3G57040.1
response regulator 9
Chr1_-_17133809 1.54 AT1G45207.3
Remorin family protein
Chr4_+_17643548 1.54 AT4G37550.6
AT4G37550.3
Acetamidase/Formamidase family protein
Chr3_-_427095 1.54 AT3G02250.1
O-fucosyltransferase family protein
Chr1_+_18351324 1.53 AT1G49580.1
Calcium-dependent protein kinase (CDPK) family protein
Chr2_-_16391073 1.53 AT2G39250.2
AT2G39250.1
Integrase-type DNA-binding superfamily protein
Chr2_-_9073233 1.53 AT2G21170.2
AT2G21170.1
triosephosphate isomerase
Chr5_+_19002564 1.53 AT5G46830.1
calcium-binding transcription factor NIG1
Chr2_-_12965723 1.53 AT2G30424.2
AT2G30424.3
AT2G30424.1
Homeodomain-like superfamily protein
Chr2_-_9074470 1.51 AT2G21170.3
triosephosphate isomerase
Chr4_-_11612903 1.51 AT4G21890.1
zinc finger MYND domain protein
Chr3_-_2137012 1.51 AT3G06770.1
AT3G06770.5
Pectin lyase-like superfamily protein
Chr1_+_4735474 1.51 AT1G13820.1
alpha/beta-Hydrolases superfamily protein
Chr4_+_7336330 1.51 AT4G12390.1
pectin methylesterase inhibitor 1
Chr2_-_15636522 1.50 AT2G37220.1
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr3_-_20797670 1.50 AT3G56040.1
UDP-glucose pyrophosphorylase 3
Chr4_-_18158873 1.50 AT4G38950.4
AT4G38950.5
ATP binding microtubule motor family protein
Chr2_+_16658468 1.50 AT2G39900.1
GATA type zinc finger transcription factor family protein
Chr4_-_18510555 1.49 AT4G39900.1
adenine deaminase
Chr4_+_8929031 1.49 AT4G15670.1
Thioredoxin superfamily protein
Chr2_+_1289832 1.49 AT2G04032.1
zinc transporter 7 precursor
Chr1_+_21136835 1.49 AT1G56430.1
nicotianamine synthase 4
Chr3_-_2137280 1.49 AT3G06770.4
AT3G06770.3
Pectin lyase-like superfamily protein
Chr3_-_19747114 1.49 AT3G53260.1
phenylalanine ammonia-lyase 2
Chr2_-_13850998 1.49 AT2G32640.1
AT2G32640.2
Lycopene beta/epsilon cyclase protein
Chr2_+_6399405 1.49 AT2G14890.1
arabinogalactan protein 9
Chr3_+_21109059 1.48 AT3G57040.2
response regulator 9
Chr4_-_14002069 1.48 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
expansin B3
Chr4_+_12376122 1.48 AT4G23750.1
AT4G23750.2
cytokinin response factor 2
Chr2_+_14708243 1.47 AT2G34860.1
AT2G34860.2
DnaJ/Hsp40 cysteine-rich domain superfamily protein
Chr2_+_12834821 1.47 AT2G30070.2
AT2G30070.1
potassium transporter 1
Chr2_-_12885768 1.47 AT2G30200.2
AT2G30200.1
EMBRYO DEFECTIVE 3147
Chr2_-_7768040 1.47 AT2G17880.1
Chaperone DnaJ-domain superfamily protein
Chr1_+_4159227 1.47 AT1G12250.1
AT1G12250.3
AT1G12250.2
Pentapeptide repeat-containing protein
Chr2_-_183639 1.46 AT2G01420.3
AT2G01420.1
AT2G01420.2
Auxin efflux carrier family protein
Chr1_-_1702749 1.46 AT1G05675.1
UDP-Glycosyltransferase superfamily protein
Chr4_+_9739518 1.45 AT4G17460.1
Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
Chr3_+_9794862 1.45 AT3G26650.1
glyceraldehyde 3-phosphate dehydrogenase A subunit
Chr5_-_19882462 1.45 AT5G49030.2
AT5G49030.1
tRNA synthetase class I (I, L, M and V) family protein
Chr2_+_14098778 1.44 AT2G33255.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_17550179 1.44 AT5G43700.1
AUX/IAA transcriptional regulator family protein
Chr5_+_24940203 1.44 AT5G62100.2
AT5G62100.4
AT5G62100.3
AT5G62100.5
AT5G62100.6
AT5G62100.1
BCL-2-associated athanogene 2
Chr1_+_284350 1.43 AT1G01790.1
AT1G01790.2
K+ efflux antiporter 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G52440

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.0 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.9 2.8 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.9 3.6 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.9 5.3 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.9 2.7 GO:0007639 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.7 2.1 GO:0071461 cellular response to redox state(GO:0071461)
0.7 2.0 GO:0045979 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.6 1.8 GO:0090058 metaxylem development(GO:0090058)
0.6 3.0 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.6 4.2 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.6 2.3 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.5 1.6 GO:0010541 acropetal auxin transport(GO:0010541)
0.5 1.6 GO:0042660 atrichoblast differentiation(GO:0010055) positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.5 2.6 GO:0005980 glycogen catabolic process(GO:0005980)
0.5 1.5 GO:1900033 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.5 5.1 GO:0046084 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.5 1.5 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.5 1.0 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.5 2.0 GO:0015669 gas transport(GO:0015669)
0.5 1.9 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.5 2.8 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.5 5.4 GO:0019685 photosynthesis, dark reaction(GO:0019685)
0.5 1.4 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.4 3.5 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.4 1.3 GO:0048255 mRNA stabilization(GO:0048255)
0.4 2.2 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.4 1.2 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.4 3.3 GO:0010065 primary meristem tissue development(GO:0010065)
0.4 2.5 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.4 9.0 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.4 2.4 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.4 1.5 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.4 2.3 GO:0048533 sporocyte differentiation(GO:0048533)
0.4 1.1 GO:0036292 DNA rewinding(GO:0036292)
0.4 1.5 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.4 3.7 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.4 1.1 GO:0010454 negative regulation of cell fate commitment(GO:0010454)
0.4 1.8 GO:0019419 sulfate reduction(GO:0019419)
0.4 2.5 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.4 1.8 GO:0042549 photosystem II stabilization(GO:0042549)
0.3 1.7 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.3 1.7 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.3 4.0 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.3 1.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.3 0.6 GO:0090628 plant epidermal cell fate specification(GO:0090628)
0.3 7.3 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.3 4.6 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.3 2.4 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.3 5.0 GO:0010052 guard cell differentiation(GO:0010052)
0.3 1.2 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.3 2.3 GO:0009080 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.3 1.4 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.3 1.4 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.3 1.1 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.3 0.5 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.3 1.6 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.3 1.8 GO:0006021 inositol biosynthetic process(GO:0006021)
0.3 2.1 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.3 22.8 GO:0045490 pectin catabolic process(GO:0045490)
0.3 1.6 GO:0031507 heterochromatin assembly(GO:0031507)
0.3 2.3 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.3 1.0 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.3 0.8 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.2 0.2 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 1.5 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.2 1.2 GO:1903960 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.2 2.6 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.2 0.7 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.2 0.7 GO:0090549 response to carbon starvation(GO:0090549)
0.2 1.4 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.2 0.7 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.2 0.7 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 0.9 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.2 0.9 GO:0000023 maltose metabolic process(GO:0000023)
0.2 2.3 GO:0051181 cofactor transport(GO:0051181)
0.2 1.1 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.2 0.7 GO:0071266 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.2 1.1 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.2 1.1 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.2 1.1 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.2 4.2 GO:0006949 syncytium formation(GO:0006949)
0.2 0.4 GO:1903961 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.2 1.1 GO:0071715 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.2 0.6 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.2 0.6 GO:0017145 stem cell division(GO:0017145)
0.2 3.6 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.2 0.8 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 0.8 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.2 1.3 GO:0097502 mannosylation(GO:0097502)
0.2 0.8 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.2 3.1 GO:0048564 photosystem I assembly(GO:0048564)
0.2 3.1 GO:0055069 zinc ion homeostasis(GO:0055069)
0.2 2.5 GO:0007143 female meiotic division(GO:0007143)
0.2 1.6 GO:0040001 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.2 0.6 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.2 4.0 GO:0070726 cell wall assembly(GO:0070726) plant-type cell wall assembly(GO:0071668)
0.2 1.4 GO:0080117 secondary growth(GO:0080117)
0.2 1.0 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.2 1.0 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.2 0.6 GO:0042539 hypotonic salinity response(GO:0042539)
0.2 0.8 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.2 5.4 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.2 0.6 GO:1905182 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.2 13.0 GO:0007018 microtubule-based movement(GO:0007018)
0.2 1.9 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.2 0.8 GO:0090603 sieve element differentiation(GO:0090603)
0.2 0.4 GO:0098586 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.2 0.9 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.2 0.7 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.2 1.3 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.2 0.9 GO:0006808 regulation of nitrogen utilization(GO:0006808) gibberellic acid homeostasis(GO:0010336) meiotic cytokinesis(GO:0033206)
0.2 0.3 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.2 0.8 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 0.2 GO:0050878 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.2 1.0 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.2 1.0 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.2 0.7 GO:0006824 cobalt ion transport(GO:0006824)
0.2 2.3 GO:0048766 root hair initiation(GO:0048766)
0.2 2.3 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.2 2.6 GO:0009089 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.2 0.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 0.8 GO:0071732 cellular response to nitric oxide(GO:0071732)
0.2 0.5 GO:0006471 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.2 2.9 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.2 0.3 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.2 0.5 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.2 1.3 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.2 7.1 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 3.7 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.2 0.5 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.2 1.1 GO:0051125 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 0.8 GO:0060631 regulation of meiosis I(GO:0060631)
0.1 5.2 GO:0042335 cuticle development(GO:0042335)
0.1 0.9 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 1.5 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.1 0.1 GO:0033559 unsaturated fatty acid metabolic process(GO:0033559)
0.1 2.4 GO:0048829 root cap development(GO:0048829)
0.1 1.3 GO:1902170 cellular response to nitrate(GO:0071249) cellular response to reactive nitrogen species(GO:1902170)
0.1 0.1 GO:0048655 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655)
0.1 1.5 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.1 0.5 GO:0015739 sialic acid transport(GO:0015739)
0.1 0.7 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.1 0.9 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 2.7 GO:0050821 protein stabilization(GO:0050821)
0.1 2.0 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.5 GO:0050792 regulation of viral process(GO:0050792)
0.1 1.2 GO:0009799 specification of symmetry(GO:0009799)
0.1 0.4 GO:1990110 callus formation(GO:1990110)
0.1 1.7 GO:0010160 formation of organ boundary(GO:0010160) formation of anatomical boundary(GO:0048859)
0.1 0.8 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.1 1.1 GO:0046471 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.1 0.8 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.1 1.4 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.1 1.0 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.1 0.6 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.1 0.4 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.5 GO:0010500 transmitting tissue development(GO:0010500)
0.1 3.1 GO:0010109 regulation of photosynthesis(GO:0010109)
0.1 0.5 GO:0080119 ER body organization(GO:0080119)
0.1 1.3 GO:0048640 negative regulation of developmental growth(GO:0048640)
0.1 0.3 GO:1990532 stress response to nickel ion(GO:1990532)
0.1 2.0 GO:0000373 Group II intron splicing(GO:0000373)
0.1 1.0 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.1 0.7 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.7 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.7 GO:0010338 leaf formation(GO:0010338)
0.1 3.0 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 0.3 GO:0001192 maintenance of transcriptional fidelity during DNA-templated transcription elongation(GO:0001192) maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter(GO:0001193)
0.1 1.7 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 1.0 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 1.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.1 1.6 GO:0044070 regulation of anion transport(GO:0044070)
0.1 0.3 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.4 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.1 0.4 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.5 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 0.3 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.1 2.4 GO:0009269 response to desiccation(GO:0009269)
0.1 0.8 GO:0009452 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.1 0.3 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 1.1 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.1 0.4 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.1 0.4 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 1.2 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 1.6 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 2.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 0.3 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.3 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.1 0.3 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.1 0.4 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.3 GO:0010254 nectary development(GO:0010254)
0.1 1.0 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.9 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 1.4 GO:0009690 cytokinin metabolic process(GO:0009690)
0.1 1.1 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 1.8 GO:0006817 phosphate ion transport(GO:0006817)
0.1 0.2 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 0.3 GO:0016120 carotene biosynthetic process(GO:0016120)
0.1 0.5 GO:0048830 adventitious root development(GO:0048830)
0.1 1.4 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 0.2 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.1 1.1 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.1 1.7 GO:0051225 spindle assembly(GO:0051225)
0.1 0.3 GO:0034508 centromere complex assembly(GO:0034508)
0.1 1.3 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.1 0.6 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 0.5 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 1.5 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 3.1 GO:0009740 gibberellic acid mediated signaling pathway(GO:0009740)
0.1 1.5 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 3.0 GO:0048825 cotyledon development(GO:0048825)
0.1 1.3 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.8 GO:0070475 rRNA base methylation(GO:0070475)
0.1 1.5 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.1 1.4 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.1 0.5 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 1.4 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.6 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 0.7 GO:0009704 de-etiolation(GO:0009704)
0.1 0.4 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.2 GO:2000278 regulation of DNA biosynthetic process(GO:2000278)
0.1 1.0 GO:0009556 microsporogenesis(GO:0009556)
0.1 0.8 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 1.8 GO:0050826 response to freezing(GO:0050826)
0.1 0.8 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 4.9 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.1 0.9 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 1.2 GO:1902099 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.1 1.5 GO:0010582 floral meristem determinacy(GO:0010582)
0.1 0.3 GO:0010098 suspensor development(GO:0010098)
0.1 0.7 GO:0015693 magnesium ion transport(GO:0015693)
0.1 0.3 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.1 1.0 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.1 3.4 GO:0048544 recognition of pollen(GO:0048544)
0.1 0.5 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.1 1.8 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.1 1.2 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.1 1.4 GO:0010089 xylem development(GO:0010089)
0.1 1.5 GO:0016129 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.0 1.4 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.6 GO:0015743 malate transport(GO:0015743)
0.0 0.7 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.2 GO:0019427 acetate metabolic process(GO:0006083) acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.0 0.2 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.0 0.3 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.2 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 0.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.1 GO:0032409 regulation of transporter activity(GO:0032409)
0.0 0.3 GO:0044773 mitotic G2 DNA damage checkpoint(GO:0007095) G2 DNA damage checkpoint(GO:0031572) mitotic DNA damage checkpoint(GO:0044773)
0.0 0.5 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.1 GO:0015904 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.0 0.5 GO:0052126 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.3 GO:0048658 anther wall tapetum development(GO:0048658)
0.0 0.4 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.2 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.5 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.1 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.0 0.4 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.4 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.3 GO:0080086 stamen filament development(GO:0080086)
0.0 0.6 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.3 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.5 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.3 GO:0046490 isopentenyl diphosphate biosynthetic process(GO:0009240) isopentenyl diphosphate metabolic process(GO:0046490)
0.0 0.3 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.6 GO:0010152 pollen maturation(GO:0010152)
0.0 1.3 GO:0015979 photosynthesis(GO:0015979)
0.0 0.6 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.4 GO:0006265 DNA topological change(GO:0006265)
0.0 0.1 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.0 1.5 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 1.6 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.7 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.4 GO:0051552 flavone metabolic process(GO:0051552) flavone biosynthetic process(GO:0051553) flavonol metabolic process(GO:0051554) flavonol biosynthetic process(GO:0051555)
0.0 0.2 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.1 GO:0009866 induced systemic resistance, ethylene mediated signaling pathway(GO:0009866)
0.0 0.9 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 0.5 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.1 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.0 0.2 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.9 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.0 0.5 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.5 GO:0010166 wax metabolic process(GO:0010166)
0.0 1.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.5 GO:0046688 response to copper ion(GO:0046688)
0.0 0.5 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.4 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.1 GO:0051320 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.0 0.1 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.9 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.1 GO:0010022 meristem determinacy(GO:0010022)
0.0 0.3 GO:0008216 spermidine metabolic process(GO:0008216)
0.0 0.1 GO:0046218 tryptophan catabolic process(GO:0006569) indole-containing compound catabolic process(GO:0042436) indolalkylamine catabolic process(GO:0046218)
0.0 2.2 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.2 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 1.0 GO:0032956 regulation of actin cytoskeleton organization(GO:0032956)
0.0 2.3 GO:0006869 lipid transport(GO:0006869)
0.0 0.5 GO:0080156 mitochondrial mRNA modification(GO:0080156) mitochondrial RNA modification(GO:1900864)
0.0 0.5 GO:0009583 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.0 0.8 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.1 GO:0055064 chloride ion homeostasis(GO:0055064)
0.0 0.4 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.3 GO:0071514 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.0 0.4 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.0 0.1 GO:0000710 meiotic mismatch repair(GO:0000710)
0.0 0.3 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.7 GO:0032506 cytokinesis by cell plate formation(GO:0000911) cytokinetic process(GO:0032506) mitotic cytokinetic process(GO:1902410)
0.0 0.4 GO:0052545 callose localization(GO:0052545)
0.0 0.1 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.2 GO:0018342 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.0 1.0 GO:0009739 response to gibberellin(GO:0009739)
0.0 0.3 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.4 GO:0010876 lipid localization(GO:0010876)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 0.7 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.0 0.3 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.5 GO:0048278 vesicle docking(GO:0048278)
0.0 0.7 GO:0006096 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757) purine nucleoside diphosphate metabolic process(GO:0009135) purine ribonucleoside diphosphate metabolic process(GO:0009179) ADP metabolic process(GO:0046031)
0.0 0.1 GO:2000034 regulation of seed maturation(GO:2000034)
0.0 0.2 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.5 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.3 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.0 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.2 GO:0010332 response to gamma radiation(GO:0010332)
0.0 0.1 GO:0016109 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 0.6 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.1 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.0 0.3 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.3 GO:0010311 lateral root formation(GO:0010311)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.7 GO:0009897 external side of plasma membrane(GO:0009897)
0.5 2.1 GO:0070505 pollen coat(GO:0070505)
0.5 2.0 GO:0016461 unconventional myosin complex(GO:0016461)
0.4 2.0 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.3 0.9 GO:0016328 lateral plasma membrane(GO:0016328)
0.3 1.3 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 0.2 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.2 0.9 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.2 1.4 GO:0071818 BAT3 complex(GO:0071818)
0.2 0.7 GO:0016323 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.2 1.8 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.2 1.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.2 1.5 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.2 0.8 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.2 4.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.2 0.4 GO:0031012 extracellular matrix(GO:0031012)
0.2 0.6 GO:0033281 TAT protein transport complex(GO:0033281)
0.2 1.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.2 4.4 GO:0005871 kinesin complex(GO:0005871)
0.2 4.1 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.2 0.7 GO:0010330 cellulose synthase complex(GO:0010330) microtubule end(GO:1990752)
0.2 2.4 GO:0005880 nuclear microtubule(GO:0005880)
0.2 1.0 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.2 0.7 GO:0032155 equatorial microtubule organizing center(GO:0000923) cell division site part(GO:0032155)
0.2 1.0 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 23.3 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.6 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 40.8 GO:0055035 plastid thylakoid membrane(GO:0055035)
0.1 3.3 GO:0009574 preprophase band(GO:0009574)
0.1 0.9 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.1 0.4 GO:0045495 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 5.5 GO:0009528 plastid inner membrane(GO:0009528)
0.1 1.0 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.1 0.5 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 1.8 GO:0009531 secondary cell wall(GO:0009531)
0.1 2.7 GO:0010319 stromule(GO:0010319)
0.1 0.3 GO:0030896 checkpoint clamp complex(GO:0030896)
0.1 0.2 GO:0009501 amyloplast(GO:0009501)
0.1 1.1 GO:0031209 SCAR complex(GO:0031209)
0.1 1.0 GO:0042555 MCM complex(GO:0042555)
0.1 0.3 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 0.5 GO:0000796 condensin complex(GO:0000796)
0.1 3.6 GO:0031976 chloroplast thylakoid(GO:0009534) plastid thylakoid(GO:0031976)
0.1 49.5 GO:0009570 chloroplast stroma(GO:0009570)
0.1 1.1 GO:0000795 synaptonemal complex(GO:0000795)
0.1 10.0 GO:0031225 anchored component of membrane(GO:0031225)
0.1 1.6 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.5 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.7 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 12.3 GO:0048046 apoplast(GO:0048046)
0.1 0.2 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 1.5 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 2.2 GO:0005657 replication fork(GO:0005657)
0.1 10.7 GO:0009505 plant-type cell wall(GO:0009505)
0.1 6.0 GO:0005615 extracellular space(GO:0005615)
0.1 1.1 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.1 0.5 GO:0045298 tubulin complex(GO:0045298)
0.1 0.5 GO:0035838 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.1 0.3 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.1 0.2 GO:0005655 ribonuclease MRP complex(GO:0000172) nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.1 1.1 GO:0000315 organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.9 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.2 GO:0032044 DSIF complex(GO:0032044)
0.0 0.6 GO:0016459 myosin complex(GO:0016459)
0.0 0.3 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 0.4 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 1.2 GO:0005811 lipid particle(GO:0005811)
0.0 0.4 GO:0010168 ER body(GO:0010168)
0.0 0.3 GO:0000313 organellar ribosome(GO:0000313)
0.0 0.2 GO:0030141 secretory granule(GO:0030141)
0.0 0.6 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.7 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0000922 spindle pole(GO:0000922)
0.0 0.6 GO:0005875 microtubule associated complex(GO:0005875)
0.0 3.4 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.3 GO:0009986 cell surface(GO:0009986)
0.0 1.4 GO:0005874 microtubule(GO:0005874)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.6 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 46.3 GO:0005576 extracellular region(GO:0005576)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.9 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 2.5 GO:0009941 chloroplast envelope(GO:0009941)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 4.9 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
1.2 3.6 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
1.0 3.0 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
1.0 3.0 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.9 2.8 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.9 2.7 GO:0015026 coreceptor activity(GO:0015026)
0.8 4.2 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.8 3.4 GO:0070402 NADPH binding(GO:0070402)
0.8 2.4 GO:0005344 oxygen transporter activity(GO:0005344)
0.8 5.3 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.7 2.8 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.7 2.0 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.6 1.8 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.6 3.4 GO:0051723 protein methylesterase activity(GO:0051723)
0.6 4.5 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.6 2.8 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.6 1.7 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.5 13.7 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.5 1.6 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.5 2.2 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.5 2.6 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.5 4.0 GO:0019137 thioglucosidase activity(GO:0019137)
0.5 4.0 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.5 1.8 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.5 1.8 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.5 2.3 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.4 2.5 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.4 2.0 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.4 8.3 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.4 1.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.4 2.3 GO:0047958 glycine:2-oxoglutarate aminotransferase activity(GO:0047958)
0.4 1.5 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.4 1.8 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.3 4.2 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.3 1.7 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.3 2.0 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.3 1.3 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.3 1.0 GO:0045430 chalcone isomerase activity(GO:0045430)
0.3 2.6 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.3 0.9 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.3 0.9 GO:0009374 biotin binding(GO:0009374)
0.3 1.5 GO:0035197 siRNA binding(GO:0035197)
0.3 0.9 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.3 2.7 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.3 2.3 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.3 2.5 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.3 1.1 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.3 1.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.3 4.1 GO:0004312 fatty acid synthase activity(GO:0004312)
0.3 1.1 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.3 2.6 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.3 1.1 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.3 0.8 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.3 1.0 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.2 1.0 GO:0004075 biotin carboxylase activity(GO:0004075)
0.2 2.9 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.2 2.6 GO:0016161 beta-amylase activity(GO:0016161)
0.2 0.9 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 0.7 GO:0004359 glutaminase activity(GO:0004359)
0.2 0.7 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.2 0.7 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.2 1.5 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.2 0.6 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.2 3.6 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.2 0.8 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 0.6 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.2 1.3 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.2 1.3 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.2 6.2 GO:0008266 poly(U) RNA binding(GO:0008266)
0.2 0.6 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 8.9 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.2 5.1 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 1.2 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.2 2.4 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.2 2.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.2 14.5 GO:0003777 microtubule motor activity(GO:0003777)
0.2 1.7 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 1.3 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.2 0.6 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.2 0.8 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.2 0.6 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.2 0.7 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.2 0.6 GO:0036310 annealing helicase activity(GO:0036310)
0.2 0.7 GO:0031409 pigment binding(GO:0031409)
0.2 1.4 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 1.4 GO:0042299 lupeol synthase activity(GO:0042299)
0.2 0.7 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 0.5 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.2 1.0 GO:0031177 phosphopantetheine binding(GO:0031177)
0.2 0.7 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.2 0.5 GO:0050551 myrcene synthase activity(GO:0050551)
0.2 1.3 GO:0008083 growth factor activity(GO:0008083)
0.2 0.6 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.2 0.5 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.2 0.5 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.2 0.6 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.2 0.5 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.2 1.5 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.2 1.1 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 0.6 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 1.0 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.4 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.1 1.5 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.1 0.6 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 0.6 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 11.1 GO:0008017 microtubule binding(GO:0008017)
0.1 0.6 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 0.5 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.7 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 1.2 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.9 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 2.3 GO:0008417 fucosyltransferase activity(GO:0008417)
0.1 0.5 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.1 1.0 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 8.7 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 2.0 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.6 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.4 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.1 0.6 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 1.8 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 2.1 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.1 1.0 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 0.8 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 1.0 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.3 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.1 1.4 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 1.1 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 1.1 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.1 0.4 GO:0019534 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.4 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 0.2 GO:0004645 phosphorylase activity(GO:0004645)
0.1 1.4 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.8 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 2.0 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 3.1 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.1 0.5 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 0.6 GO:0010011 auxin binding(GO:0010011)
0.1 0.3 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.4 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.5 GO:0015189 arginine transmembrane transporter activity(GO:0015181) L-lysine transmembrane transporter activity(GO:0015189)
0.1 2.4 GO:0008810 cellulase activity(GO:0008810)
0.1 0.5 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 1.1 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.1 1.0 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 4.1 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 0.6 GO:0016151 nickel cation binding(GO:0016151)
0.1 1.3 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.4 GO:0003680 AT DNA binding(GO:0003680)
0.1 6.0 GO:0030599 pectinesterase activity(GO:0030599)
0.1 0.6 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.1 0.6 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 0.5 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.3 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.5 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 0.3 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.1 1.0 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 1.3 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 4.4 GO:0043621 protein self-association(GO:0043621)
0.1 2.1 GO:0008378 galactosyltransferase activity(GO:0008378)
0.1 0.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.4 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.3 GO:0047780 citrate dehydratase activity(GO:0047780)
0.1 0.8 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 0.3 GO:0016436 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.1 1.2 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.1 0.5 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.7 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 0.2 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726) oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.3 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.9 GO:0004033 aldo-keto reductase (NADP) activity(GO:0004033) alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 0.7 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.9 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.1 GO:0004046 aminoacylase activity(GO:0004046)
0.0 1.1 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 1.5 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.2 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 1.9 GO:0043022 ribosome binding(GO:0043022)
0.0 0.5 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.2 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.0 5.0 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.2 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.8 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 2.3 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.3 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 0.7 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.7 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 5.3 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.3 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.0 0.2 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.2 GO:0004001 adenosine kinase activity(GO:0004001)
0.0 0.2 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.8 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 3.0 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.1 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.1 GO:0019825 oxygen binding(GO:0019825)
0.0 0.4 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 1.2 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.1 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.0 0.7 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.4 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.6 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.2 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.6 GO:0010333 terpene synthase activity(GO:0010333)
0.0 1.2 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.2 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 1.5 GO:0008483 transaminase activity(GO:0008483)
0.0 0.2 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.5 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.4 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.7 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.1 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.2 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.4 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.9 GO:0016875 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0 0.1 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.0 0.2 GO:0008318 protein prenyltransferase activity(GO:0008318)
0.0 0.2 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.2 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 2.8 GO:0005507 copper ion binding(GO:0005507)
0.0 0.6 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.2 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 1.1 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.0 0.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.3 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 1.2 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 0.2 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.1 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.1 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.0 0.5 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 0.1 GO:0015108 chloride transmembrane transporter activity(GO:0015108) anion:cation symporter activity(GO:0015296) cation:chloride symporter activity(GO:0015377)
0.0 0.3 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.5 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.6 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.3 GO:0017069 snRNA binding(GO:0017069)
0.0 0.9 GO:0016410 N-acyltransferase activity(GO:0016410)
0.0 0.5 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 0.2 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.9 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.1 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.1 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.2 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.2 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.2 GO:0008173 RNA methyltransferase activity(GO:0008173)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.0 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.2 1.2 PID P53 REGULATION PATHWAY p53 pathway
0.2 0.7 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.2 0.6 PID AURORA A PATHWAY Aurora A signaling
0.2 1.0 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.1 0.7 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.1 0.9 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.2 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.8 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.4 1.7 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.2 0.7 REACTOME SPRY REGULATION OF FGF SIGNALING Genes involved in Spry regulation of FGF signaling
0.2 1.1 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.2 0.5 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.2 0.5 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.1 1.0 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.7 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.1 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.1 0.7 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.1 1.0 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.7 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.1 0.7 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 0.2 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.2 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 0.8 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.7 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.2 REACTOME TCA CYCLE AND RESPIRATORY ELECTRON TRANSPORT Genes involved in The citric acid (TCA) cycle and respiratory electron transport
0.0 0.2 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination