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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G42860

Z-value: 2.49

Transcription factors associated with AT3G42860

Gene Symbol Gene ID Gene Info
AT3G42860
AT3G42860 zinc knuckle (CCHC-type) family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT3G42860arTal_v1_Chr3_-_14948228_149482280.384.3e-02Click!

Activity profile of AT3G42860 motif

Sorted Z-values of AT3G42860 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_18077517 10.56 AT2G43570.1
CHI
chitinase
Chr5_-_3402389 9.22 AT5G10760.1
AT5G10760
Eukaryotic aspartyl protease family protein
Chr5_+_24608605 8.73 AT5G61160.1
AACT1
anthocyanin 5-aromatic acyltransferase 1
Chr1_-_12398418 8.16 AT1G34060.1
AT1G34060
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr5_+_18390942 8.02 AT5G45380.1
DUR3
urea-proton symporter DEGRADATION OF UREA 3 (DUR3)
Chr4_+_285876 7.97 AT4G00700.2
AT4G00700.1
AT4G00700
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr2_+_18066960 7.66 AT2G43510.1
TI1
trypsin inhibitor protein 1
Chr1_-_3756998 7.61 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr1_-_12397986 7.49 AT1G34060.2
AT1G34060
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr4_+_10875233 6.99 AT4G20110.2
AT4G20110.1
VSR7
VACUOLAR SORTING RECEPTOR 7
Chr1_+_7949476 6.94 AT1G22500.1
ATL15
RING/U-box superfamily protein
Chr2_-_13862614 6.91 AT2G32680.1
RLP23
receptor like protein 23
Chr1_+_26651840 6.83 AT1G70690.1
HWI1
Receptor-like protein kinase-related family protein
Chr5_+_4213955 6.81 AT5G13210.1
AT5G13210
Uncharacterized conserved protein UCP015417, vWA
Chr2_-_18646606 6.62 AT2G45220.1
AT2G45220
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_8097420 6.62 AT2G18690.2
AT2G18690.1
AT2G18690
transmembrane protein
Chr3_+_17724400 6.58 AT3G48020.1
AT3G48020
hypothetical protein
Chr1_-_3392524 6.39 AT1G10340.2
AT1G10340.1
AT1G10340
Ankyrin repeat family protein
Chr1_-_659980 6.36 AT1G02920.1
GSTF7
glutathione S-transferase 7
Chr2_-_11800928 6.22 AT2G27660.1
AT2G27660
Cysteine/Histidine-rich C1 domain family protein
Chr3_-_23410360 6.13 AT3G63380.1
AT3G63380
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr4_-_13672413 6.07 AT4G27300.1
AT4G27300
S-locus lectin protein kinase family protein
Chr3_+_4603885 5.97 AT3G13950.1
AT3G13950
ankyrin
Chr1_-_20949281 5.91 AT1G56010.2
NAC1
NAC domain containing protein 1
Chr4_+_7148124 5.86 AT4G11890.3
AT4G11890.1
AT4G11890.4
ARCK1
Protein kinase superfamily protein
Chr4_-_12890261 5.86 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
Chr1_-_19443624 5.80 AT1G52200.1
AT1G52200.2
AT1G52200
PLAC8 family protein
Chr1_+_12917070 5.74 AT1G35230.1
AGP5
arabinogalactan protein 5
Chr2_-_19350650 5.71 AT2G47130.1
SDR3
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_12314025 5.66 AT4G23610.1
AT4G23610
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_+_19375985 5.64 AT2G47190.1
MYB2
myb domain protein 2
Chr3_-_22907958 5.47 AT3G61880.1
AT3G61880.2
CYP78A9
cytochrome p450 78a9
Chr4_-_8273903 5.38 AT4G14365.1
XBAT34
hypothetical protein
Chr5_-_14935885 5.29 AT5G37600.1
GSR 1
hypothetical protein
Chr4_-_1112033 5.27 AT4G02520.1
GSTF2
glutathione S-transferase PHI 2
Chr5_+_12558154 5.25 AT5G33290.1
XGD1
xylogalacturonan deficient 1
Chr1_-_2346862 5.21 AT1G07620.3
AT1G07620.2
AT1G07620.1
ATOBGM
GTP-binding protein Obg/CgtA
Chr4_+_8294446 5.16 AT4G14400.2
AT4G14400.3
ACD6
ankyrin repeat family protein
Chr3_-_19056447 5.12 AT3G51330.2
AT3G51330.3
AT3G51330.1
AT3G51330
Eukaryotic aspartyl protease family protein
Chr3_+_22052121 5.12 AT3G59700.1
HLECRK
lectin-receptor kinase
Chr3_+_7345261 5.11 AT3G20960.2
AT3G20960.1
CYP705A33
cytochrome P450, family 705, subfamily A, polypeptide 33
Chr3_-_11030906 5.10 AT3G29034.1
AT3G29034
transmembrane protein
Chr3_+_18465318 5.04 AT3G49780.1
PSK4
phytosulfokine 4 precursor
Chr1_-_20948969 5.00 AT1G56010.1
NAC1
NAC domain containing protein 1
Chr1_+_20617313 4.99 AT1G55265.1
AT1G55265
DUF538 family protein, putative (Protein of unknown function, DUF538)
Chr2_+_17251819 4.87 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_7964127 4.86 AT3G22460.1
OASA2
O-acetylserine (thiol) lyase (OAS-TL) isoform A2
Chr3_-_17755190 4.78 AT3G48080.1
AT3G48080
alpha/beta-Hydrolases superfamily protein
Chr1_-_8425385 4.78 AT1G23840.1
AT1G23840
transmembrane protein
Chr5_-_19735489 4.76 AT5G48657.6
AT5G48657.5
AT5G48657.1
AT5G48657
defense protein-like protein
Chr2_-_18324561 4.75 AT2G44380.1
AT2G44380
Cysteine/Histidine-rich C1 domain family protein
Chr2_+_18753023 4.72 AT2G45510.1
CYP704A2
cytochrome P450, family 704, subfamily A, polypeptide 2
Chr3_-_8229619 4.64 AT3G23120.1
RLP38
receptor like protein 38
Chr4_+_8294165 4.62 AT4G14400.1
ACD6
ankyrin repeat family protein
Chr5_-_19735669 4.59 AT5G48657.3
AT5G48657.2
AT5G48657.4
AT5G48657
defense protein-like protein
Chr1_+_12448543 4.58 AT1G34180.1
AT1G34180.3
AT1G34180.2
AT1G34180.4
NAC016
NAC domain containing protein 16
Chr1_+_12584345 4.57 AT1G34420.1
AT1G34420
leucine-rich repeat transmembrane protein kinase family protein
Chr1_-_8537780 4.55 AT1G24140.1
AT1G24140
Matrixin family protein
Chr3_-_1678968 4.53 AT3G05690.2
AT3G05690.1
NF-YA2
nuclear factor Y, subunit A2
Chr5_-_7410102 4.52 AT5G22380.1
NAC090
NAC domain containing protein 90
Chr1_-_7534927 4.49 AT1G21520.1
AT1G21520
hypothetical protein
Chr5_+_16290386 4.44 AT5G40690.1
AT5G40690
histone-lysine N-methyltransferase trithorax-like protein
Chr3_-_9313599 4.38 AT3G25610.1
AT3G25610
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr5_+_21240717 4.27 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr3_-_9599988 4.22 AT3G26230.1
CYP71B24
cytochrome P450, family 71, subfamily B, polypeptide 24
Chr4_-_12160279 4.20 AT4G23230.1
CRK15
cysteine-rich RECEPTOR-like kinase
Chr5_-_9148391 4.19 AT5G26170.1
WRKY50
WRKY DNA-binding protein 50
Chr2_-_13613573 4.19 AT2G31990.1
AT2G31990.3
AT2G31990.2
AT2G31990
Exostosin family protein
Chr5_+_15578749 4.17 AT5G38910.2
AT5G38910.1
AT5G38910
RmlC-like cupins superfamily protein
Chr1_+_10996870 4.09 AT1G30900.1
VSR6
VACUOLAR SORTING RECEPTOR 6
Chr1_-_19261755 4.06 AT1G51860.2
AT1G51860.1
AT1G51860
Leucine-rich repeat protein kinase family protein
Chr5_+_1615507 4.05 AT5G05460.1
ENGase85A
Glycosyl hydrolase family 85
Chr4_+_744804 4.05 AT4G01720.1
WRKY47
WRKY family transcription factor
Chr1_+_24357749 4.02 AT1G65500.1
AT1G65500
transmembrane protein
Chr5_+_15619691 3.98 AT5G39024.1
AT5G39030.1
AT5G39030.2
AT5G39024
AT5G39030
hypothetical protein
Protein kinase superfamily protein
Chr4_-_15947026 3.97 AT4G33050.4
AT4G33050.3
AT4G33050.6
AT4G33050.2
AT4G33050.1
AT4G33050.5
EDA39
calmodulin-binding family protein
Chr5_+_25210301 3.97 AT5G62770.1
AT5G62770
membrane-associated kinase regulator, putative (DUF1645)
Chr1_-_1547798 3.96 AT1G05300.2
AT1G05300.1
ZIP5
zinc transporter 5 precursor
Chr2_+_16460247 3.96 AT2G39420.1
AT2G39420
alpha/beta-Hydrolases superfamily protein
Chr1_-_28925421 3.95 AT1G76970.6
AT1G76970.4
AT1G76970.1
AT1G76970.3
AT1G76970.2
AT1G76970.5
AT1G76970
Target of Myb protein 1
Chr2_+_19000180 3.92 AT2G46270.2
AT2G46270.1
AT2G46270.4
AT2G46270.3
GBF3
G-box binding factor 3
Chr4_+_7147865 3.92 AT4G11890.2
ARCK1
Protein kinase superfamily protein
Chr4_-_12062757 3.90 AT4G23010.2
AT4G23010.1
AT4G23010.3
UTR2
UDP-galactose transporter 2
Chr2_-_16368570 3.90 AT2G39210.1
AT2G39210
Major facilitator superfamily protein
Chr5_-_1580875 3.88 AT5G05340.1
PRX52
Peroxidase superfamily protein
Chr2_+_18961283 3.87 AT2G46150.1
AT2G46150
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr3_+_25355 3.86 AT3G01080.2
AT3G01080.3
AT3G01080.1
WRKY58
WRKY DNA-binding protein 58
Chr5_+_25550937 3.85 AT5G63850.1
AAP4
amino acid permease 4
Chr5_+_25908247 3.84 AT5G64810.1
WRKY51
WRKY DNA-binding protein 51
Chr1_-_23460884 3.83 AT1G63245.1
CLE14
CLAVATA3/ESR-RELATED 14
Chr1_-_7706198 3.81 AT1G21920.2
AT1G21920.1
AT1G21920
Histone H3 K4-specific methyltransferase SET7/9 family protein
Chr3_-_6826585 3.81 AT3G19660.1
AT3G19660
hypothetical protein
Chr1_-_29418994 3.80 AT1G78190.1
AT1G78190
Trm112p-like protein
Chr1_+_27118177 3.79 AT1G72060.1
AT1G72060
serine-type endopeptidase inhibitor
Chr3_-_11384145 3.78 AT3G29575.1
AT3G29575.4
AT3G29575.3
AFP3
ABI five binding protein 3
Chr3_+_296024 3.75 AT3G01830.2
AT3G01830.1
AT3G01830
Calcium-binding EF-hand family protein
Chr2_-_19412328 3.75 AT2G47270.1
UPB1
transcription factor UPBEAT protein
Chr1_+_8549191 3.75 AT1G24150.2
AT1G24150.1
FH4
formin homologue 4
Chr1_+_27954129 3.74 AT1G74360.1
AT1G74360
Leucine-rich repeat protein kinase family protein
Chr1_+_27132014 3.72 AT1G72120.1
AT1G72120
Major facilitator superfamily protein
Chr2_+_1564056 3.71 AT2G04495.1
AT2G04495
transmembrane protein
Chr5_-_213472 3.70 AT5G01540.1
LECRKA4.1
lectin receptor kinase a4.1
Chr4_+_8713689 3.69 AT4G15260.1
AT4G15260
UDP-Glycosyltransferase superfamily protein
Chr2_+_16556801 3.65 AT2G39705.1
RTFL8
ROTUNDIFOLIA like 8
Chr1_+_26703966 3.62 AT1G70810.1
AT1G70810
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_+_3377652 3.62 AT5G10695.1
AT5G10695.2
AT5G10695
methionyl-tRNA synthetase
Chr5_+_20090648 3.62 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
Chr5_+_20436180 3.60 AT5G50200.3
AT5G50200.2
WR3
nitrate transmembrane transporter
Chr5_+_6061298 3.60 AT5G18310.2
AT5G18310.1
AT5G18310.3
AT5G18310
ubiquitin hydrolase
Chr2_-_16690182 3.58 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr2_+_9627342 3.56 AT2G22660.3
AT2G22660.2
AT2G22660.1
AT2G22660
DNA-binding protein, putative (duplicated DUF1399)
Chr3_+_3016490 3.55 AT3G09830.3
AT3G09830.1
AT3G09830.2
AT3G09830
Protein kinase superfamily protein
Chr5_+_21534473 3.54 AT5G53120.6
AT5G53120.1
AT5G53120.2
SPDS3
spermidine synthase 3
Chr5_+_8378759 3.53 AT5G24530.1
DMR6
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_2346430 3.48 AT1G07620.4
ATOBGM
GTP-binding protein Obg/CgtA
Chr5_+_24553744 3.47 AT5G61010.1
AT5G61010.2
EXO70E2
exocyst subunit exo70 family protein E2
Chr4_+_5448049 3.45 AT4G08555.1
AT4G08555
hypothetical protein
Chr5_+_24046512 3.44 AT5G59680.1
AT5G59680
Leucine-rich repeat protein kinase family protein
Chr4_-_18459257 3.44 AT4G39780.1
AT4G39780
Integrase-type DNA-binding superfamily protein
Chr5_+_24279897 3.40 AT5G60360.3
AT5G60360.2
ALP
aleurain-like protease
Chr1_-_2152541 3.40 AT1G07000.1
EXO70B2
exocyst subunit exo70 family protein B2
Chr5_-_24528151 3.40 AT5G60950.1
COBL5
COBRA-like protein 5 precursor
Chr3_-_3836834 3.39 AT3G12040.2
AT3G12040.1
AT3G12040
DNA-3-methyladenine glycosylase (MAG)
Chr5_+_26864846 3.38 AT5G67340.2
AT5G67340
ARM repeat superfamily protein
Chr5_+_24279660 3.35 AT5G60360.1
ALP
aleurain-like protease
Chr1_-_7099892 3.34 AT1G20490.1
AT1G20490.2
AT1G20490
AMP-dependent synthetase and ligase family protein
Chr1_-_24493923 3.33 AT1G65845.1
AT1G65845
transmembrane protein
Chr5_-_15282769 3.33 AT5G38250.1
AT5G38250
Protein kinase family protein
Chr4_-_12006209 3.33 AT4G22880.2
AT4G22880.1
AT4G22880.3
LDOX
leucoanthocyanidin dioxygenase
Chr5_+_15643493 3.32 AT5G39090.1
AT5G39090
HXXXD-type acyl-transferase family protein
Chr3_-_6557938 3.25 AT3G19010.2
AT3G19010.3
AT3G19010.1
AT3G19010
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_20436426 3.21 AT5G50200.1
WR3
nitrate transmembrane transporter
Chr5_+_26864395 3.20 AT5G67340.1
AT5G67340
ARM repeat superfamily protein
Chr1_-_23226983 3.19 AT1G62710.1
BETA-VPE
beta vacuolar processing enzyme
Chr5_+_21534766 3.17 AT5G53120.7
AT5G53120.3
SPDS3
spermidine synthase 3
Chr2_+_12322386 3.17 AT2G28710.1
AT2G28710
C2H2-type zinc finger family protein
Chr3_+_21128396 3.15 AT3G57090.1
AT3G57090.2
BIGYIN
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_2529421 3.15 AT5G07920.1
AT5G07920.3
AT5G07920.2
DGK1
diacylglycerol kinase1
Chr1_+_29504532 3.14 AT1G78420.2
AT1G78420.1
AT1G78420
RING/U-box superfamily protein
Chr4_+_13839038 3.14 AT4G27740.1
AT4G27740
Yippee family putative zinc-binding protein
Chr1_-_26481630 3.11 AT1G70300.1
KUP6
K+ uptake permease 6
Chr1_+_12503360 3.09 AT1G34300.1
AT1G34300
lectin protein kinase family protein
Chr2_+_19058248 3.09 AT2G46430.1
CNGC3
cyclic nucleotide gated channel 3
Chr4_-_12120214 3.06 AT4G23130.2
AT4G23130.1
AT4G23130.3
CRK5
cysteine-rich RLK (RECEPTOR-like protein kinase) 5
Chr5_+_6061632 3.04 AT5G18310.4
AT5G18310
ubiquitin hydrolase
Chr5_-_25168060 3.02 AT5G62680.1
GTR2
Major facilitator superfamily protein
Chr5_-_26547793 3.02 AT5G66490.1
AT5G66490
hypothetical protein
Chr1_+_28537593 3.00 AT1G76040.1
AT1G76040.2
AT1G76040.3
CPK29
calcium-dependent protein kinase 29
Chr2_-_16235234 3.00 AT2G38860.3
AT2G38860.1
AT2G38860.2
YLS5
Class I glutamine amidotransferase-like superfamily protein
Chr2_+_19057999 3.00 AT2G46430.2
CNGC3
cyclic nucleotide gated channel 3
Chr3_-_6558648 2.96 AT3G19010.4
AT3G19010
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_-_12428730 2.95 AT2G28940.1
AT2G28940.2
AT2G28940
Protein kinase superfamily protein
Chr1_+_21884018 2.89 AT1G59580.1
AT1G59580.2
MPK2
mitogen-activated protein kinase homolog 2
Chr5_-_22759556 2.89 AT5G56230.1
PRA1.G2
prenylated RAB acceptor 1.G2
Chr1_-_1996355 2.88 AT1G06520.1
GPAT1
glycerol-3-phosphate acyltransferase 1
Chr3_-_21079856 2.88 AT3G56950.2
AT3G56950.1
SIP2%3B1
small and basic intrinsic protein 2;1
Chr5_+_24623248 2.88 AT5G61210.1
AT5G61210.2
SNAP33
soluble N-ethylmaleimide-sensitive factor adaptor protein 33
Chr3_+_7963855 2.88 AT3G22460.2
OASA2
O-acetylserine (thiol) lyase (OAS-TL) isoform A2
Chr4_-_13222376 2.86 AT4G26080.1
ABI1
Protein phosphatase 2C family protein
Chr3_-_19251112 2.86 AT3G51890.1
AT3G51890
Clathrin light chain protein
Chr5_-_18763503 2.85 AT5G46260.1
AT5G46260
disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_18150466 2.85 AT1G49050.3
AT1G49050.1
AT1G49050.2
AT1G49050
Eukaryotic aspartyl protease family protein
Chr3_-_8450799 2.85 AT3G23550.1
AT3G23550
MATE efflux family protein
Chr3_-_20361560 2.84 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
Chr3_-_6804114 2.83 AT3G19580.2
ZF2
zinc-finger protein 2
Chr5_+_21535260 2.80 AT5G53120.5
SPDS3
spermidine synthase 3
Chr5_+_927821 2.76 AT5G03640.2
AT5G03640
Protein kinase superfamily protein
Chr1_+_23072222 2.76 AT1G62370.1
AT1G62370
RING/U-box superfamily protein
Chr4_+_18478890 2.75 AT4G39830.3
AT4G39830.1
AT4G39830.2
AT4G39830.4
AT4G39830
Cupredoxin superfamily protein
Chr3_+_19069303 2.75 AT3G51370.3
AT3G51370.2
AT3G51370
Protein phosphatase 2C family protein
Chr5_+_21535059 2.75 AT5G53120.4
SPDS3
spermidine synthase 3
Chr5_-_3863824 2.74 AT5G11970.1
AT5G11970
ABC family ABC transporter, putative (DUF3511)
Chr5_-_17670239 2.74 AT5G43910.1
AT5G43910.2
AT5G43910.3
AT5G43910.4
AT5G43910.5
AT5G43910
pfkB-like carbohydrate kinase family protein
Chr3_-_6804296 2.71 AT3G19580.1
ZF2
zinc-finger protein 2
Chr3_-_10977527 2.69 AT3G28950.1
AT3G28950
AIG2-like (avirulence induced gene) family protein
Chr4_+_12185369 2.69 AT4G23310.2
AT4G23310.1
CRK23
cysteine-rich RLK (RECEPTOR-like protein kinase) 23
Chr4_-_14009287 2.68 AT4G28270.1
RMA2
RING membrane-anchor 2
Chr2_+_7697311 2.67 AT2G17720.1
P4H5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_19069127 2.66 AT3G51370.1
AT3G51370
Protein phosphatase 2C family protein
Chr2_+_17221840 2.65 AT2G41310.1
RR3
response regulator 3
Chr3_+_3061945 2.65 AT3G09960.1
AT3G09960
Calcineurin-like metallo-phosphoesterase superfamily protein
Chr1_-_26110357 2.65 AT1G69450.3
AT1G69450.2
AT1G69450
Early-responsive to dehydration stress protein (ERD4)
Chr5_+_10856661 2.64 AT5G28830.1
AT5G28830
calcium-binding EF hand family protein
Chr3_+_20558102 2.61 AT3G55450.2
PBL1
PBS1-like 1
Chr4_-_17033972 2.61 AT4G35985.3
AT4G35985.2
AT4G35985
Senescence/dehydration-associated protein-like protein
Chr5_+_4271730 2.59 AT5G13330.1
Rap2.6L
related to AP2 6l
Chr4_+_7858183 2.59 AT4G13510.1
AMT1%3B1
ammonium transporter 1;1
Chr3_+_16617398 2.59 AT3G45290.1
MLO3
Seven transmembrane MLO family protein
Chr1_-_5297075 2.58 AT1G15400.2
AT1G15400
hypothetical protein
Chr1_+_25477670 2.58 AT1G67940.1
ABCI17
non-intrinsic ABC protein 3
Chr4_-_11393226 2.57 AT4G21380.2
AT4G21380.1
RK3
receptor kinase 3
Chr5_-_8856758 2.56 AT5G25440.1
AT5G25440.2
AT5G25440
Protein kinase superfamily protein
Chr4_+_12594576 2.55 AT4G24290.3
AT4G24290
MAC/Perforin domain-containing protein
Chr3_+_4982588 2.55 AT3G14830.1
AT3G14830.2
AT3G14830.3
AT3G14830
epstein-barr nuclear antigen
Chr4_-_13571495 2.55 AT4G27020.1
AT4G27020
inositol-1,4,5-trisphosphate 5-phosphatase
Chr5_+_3524677 2.54 AT5G11090.1
AT5G11090
serine-rich protein-like protein
Chr1_+_24349399 2.53 AT1G65486.3
AT1G65486.4
AT1G65486.1
AT1G65486.2
AT1G65486
transmembrane protein
Chr5_+_21399331 2.53 AT5G52810.1
AT5G52810
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_635144 2.53 AT1G02860.3
AT1G02860.1
AT1G02860.2
NLA
SPX (SYG1/Pho81/XPR1) domain-containing protein
Chr5_+_927136 2.53 AT5G03640.1
AT5G03640
Protein kinase superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G42860

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.9 8.8 GO:0032491 detection of molecule of fungal origin(GO:0032491)
2.9 11.7 GO:0010272 response to silver ion(GO:0010272)
2.7 8.0 GO:0015840 urea transport(GO:0015840)
1.7 12.1 GO:0006597 spermine biosynthetic process(GO:0006597)
1.4 4.1 GO:0007099 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
1.3 6.7 GO:0033591 response to L-ascorbic acid(GO:0033591)
1.3 13.2 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
1.0 3.9 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.9 1.7 GO:0071467 cellular response to pH(GO:0071467)
0.8 4.1 GO:0006517 protein deglycosylation(GO:0006517)
0.8 3.2 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.8 5.6 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.8 2.4 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.8 7.7 GO:0009405 pathogenesis(GO:0009405)
0.7 4.4 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.7 2.2 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.7 2.9 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.7 3.5 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.7 0.7 GO:0080121 AMP transport(GO:0080121)
0.7 2.0 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.6 3.2 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.6 2.5 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.6 1.9 GO:0010447 response to acidic pH(GO:0010447)
0.6 1.8 GO:0046203 spermidine catabolic process(GO:0046203)
0.6 3.5 GO:1903533 regulation of protein targeting(GO:1903533)
0.6 1.7 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.5 2.2 GO:0015720 allantoin transport(GO:0015720)
0.5 2.1 GO:0009557 antipodal cell differentiation(GO:0009557)
0.5 2.7 GO:0015824 proline transport(GO:0015824)
0.5 3.2 GO:0006624 vacuolar protein processing(GO:0006624)
0.5 2.1 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.5 1.5 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.5 10.9 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.5 3.0 GO:0034227 tRNA thio-modification(GO:0034227)
0.5 24.5 GO:0002239 response to oomycetes(GO:0002239)
0.5 2.3 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.5 1.4 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.5 1.4 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.4 2.2 GO:1902065 response to L-glutamate(GO:1902065)
0.4 1.3 GO:0010198 synergid death(GO:0010198)
0.4 1.3 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.4 11.0 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.4 1.7 GO:0006527 arginine catabolic process(GO:0006527)
0.4 2.9 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.4 6.6 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.4 1.6 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.4 1.6 GO:0009304 tRNA transcription(GO:0009304)
0.4 3.1 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.4 1.5 GO:0034389 lipid particle organization(GO:0034389)
0.4 6.0 GO:0000266 mitochondrial fission(GO:0000266)
0.4 2.2 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.4 2.5 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.4 1.8 GO:0006884 cell volume homeostasis(GO:0006884)
0.4 1.1 GO:0071494 cellular response to UV-C(GO:0071494)
0.4 1.1 GO:0080168 abscisic acid transport(GO:0080168)
0.3 3.8 GO:1902645 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.3 2.1 GO:0090202 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.3 0.7 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.3 4.3 GO:0009608 response to symbiont(GO:0009608)
0.3 4.6 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.3 6.8 GO:0015706 nitrate transport(GO:0015706)
0.3 1.6 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.3 4.5 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.3 2.9 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.3 1.2 GO:0046477 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.3 17.1 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.3 1.2 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.3 1.2 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.3 0.9 GO:0035493 SNARE complex assembly(GO:0035493)
0.3 2.9 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
0.3 3.8 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.3 1.6 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.3 2.1 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.3 1.9 GO:0060866 leaf abscission(GO:0060866)
0.3 6.9 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.3 3.2 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.3 2.8 GO:0035435 phosphate ion transmembrane transport(GO:0035435)
0.2 3.5 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.2 0.9 GO:0010971 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.2 8.2 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.2 2.2 GO:1990937 xylan acetylation(GO:1990937)
0.2 2.7 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.2 2.0 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.2 1.0 GO:0000098 sulfur amino acid catabolic process(GO:0000098)
0.2 9.2 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.2 1.1 GO:0048446 petal morphogenesis(GO:0048446)
0.2 1.4 GO:0006772 thiamine metabolic process(GO:0006772) thiamine-containing compound metabolic process(GO:0042723)
0.2 1.6 GO:0050777 negative regulation of immune response(GO:0050777)
0.2 3.8 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.2 3.3 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.2 2.1 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.2 0.9 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.2 0.8 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.2 10.7 GO:0048544 recognition of pollen(GO:0048544)
0.2 1.8 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.2 2.4 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.2 2.8 GO:0019374 galactolipid metabolic process(GO:0019374)
0.2 0.5 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.2 1.4 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.2 0.5 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.2 1.1 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.1 1.5 GO:0015749 monosaccharide transport(GO:0015749)
0.1 1.2 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 0.9 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 4.2 GO:0072666 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.1 2.1 GO:0006465 signal peptide processing(GO:0006465)
0.1 1.0 GO:0080186 developmental vegetative growth(GO:0080186)
0.1 0.4 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.1 0.4 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 1.1 GO:0018344 protein geranylgeranylation(GO:0018344)
0.1 0.9 GO:0019405 glycerol-3-phosphate metabolic process(GO:0006072) alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
0.1 1.7 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 1.1 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 0.8 GO:0016559 peroxisome fission(GO:0016559)
0.1 1.2 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 2.1 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.1 2.1 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.1 1.2 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 1.1 GO:0007584 response to nutrient(GO:0007584)
0.1 0.7 GO:1900055 regulation of leaf senescence(GO:1900055)
0.1 0.3 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.1 0.5 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.1 1.1 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 1.0 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 2.8 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.1 1.5 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 1.4 GO:0006521 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.1 0.2 GO:0051703 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.1 0.3 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.6 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.1 0.3 GO:0010508 positive regulation of autophagy(GO:0010508)
0.1 1.8 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.1 4.2 GO:0071805 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.1 2.9 GO:0007030 Golgi organization(GO:0007030)
0.1 1.1 GO:0000165 MAPK cascade(GO:0000165)
0.1 2.3 GO:0006874 cellular calcium ion homeostasis(GO:0006874)
0.1 1.1 GO:0010165 response to X-ray(GO:0010165)
0.1 0.7 GO:0090421 embryonic meristem initiation(GO:0090421)
0.1 1.2 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 0.5 GO:1901562 response to paraquat(GO:1901562)
0.1 0.3 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.1 1.4 GO:0009704 de-etiolation(GO:0009704)
0.1 1.7 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.1 1.3 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.1 2.5 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 1.1 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.1 4.3 GO:0012501 programmed cell death(GO:0012501)
0.1 2.6 GO:0070417 cellular response to cold(GO:0070417)
0.1 2.5 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.1 0.8 GO:0009088 threonine biosynthetic process(GO:0009088)
0.1 0.5 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 0.4 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.1 5.2 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.1 3.6 GO:0009867 jasmonic acid mediated signaling pathway(GO:0009867)
0.1 1.1 GO:0010037 response to carbon dioxide(GO:0010037)
0.1 3.5 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.1 0.9 GO:0006282 regulation of DNA repair(GO:0006282)
0.1 2.1 GO:0030838 positive regulation of actin filament polymerization(GO:0030838) actin nucleation(GO:0045010)
0.1 4.4 GO:2000280 regulation of root development(GO:2000280)
0.1 1.2 GO:0009641 shade avoidance(GO:0009641)
0.1 7.1 GO:0018105 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.1 0.4 GO:0032204 regulation of telomere maintenance(GO:0032204) regulation of homeostatic process(GO:0032844)
0.1 2.3 GO:0009625 response to insect(GO:0009625)
0.1 1.0 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 1.4 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.7 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.1 0.3 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 0.8 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 3.7 GO:0042538 hyperosmotic salinity response(GO:0042538)
0.1 1.3 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.1 0.6 GO:0010332 response to gamma radiation(GO:0010332)
0.1 1.3 GO:0008219 cell death(GO:0008219)
0.1 0.2 GO:0035264 multicellular organism growth(GO:0035264)
0.1 1.7 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.1 7.8 GO:0043413 protein glycosylation(GO:0006486) glycoprotein biosynthetic process(GO:0009101) macromolecule glycosylation(GO:0043413)
0.1 0.2 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.1 2.1 GO:0009751 response to salicylic acid(GO:0009751)
0.1 2.5 GO:0006475 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.1 0.7 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 1.3 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 0.6 GO:0032366 intracellular sterol transport(GO:0032366)
0.1 1.4 GO:0010582 floral meristem determinacy(GO:0010582)
0.1 3.3 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 1.4 GO:0031347 regulation of defense response(GO:0031347)
0.0 2.2 GO:0006865 amino acid transport(GO:0006865)
0.0 2.9 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.0 GO:0019932 second-messenger-mediated signaling(GO:0019932)
0.0 2.3 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.0 3.8 GO:0080167 response to karrikin(GO:0080167)
0.0 1.8 GO:0009968 negative regulation of signal transduction(GO:0009968)
0.0 0.4 GO:0071365 cellular response to auxin stimulus(GO:0071365)
0.0 4.6 GO:0009723 response to ethylene(GO:0009723)
0.0 2.2 GO:0008283 cell proliferation(GO:0008283)
0.0 0.1 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.0 0.9 GO:0032940 exocytosis(GO:0006887) secretion by cell(GO:0032940)
0.0 1.3 GO:0043087 regulation of GTPase activity(GO:0043087)
0.0 0.8 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.0 0.6 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.9 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 1.1 GO:0030050 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.1 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.9 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 1.7 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 1.3 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.0 1.3 GO:0009624 response to nematode(GO:0009624)
0.0 1.8 GO:0000911 cytokinesis by cell plate formation(GO:0000911)
0.0 1.6 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 1.1 GO:0009850 auxin metabolic process(GO:0009850)
0.0 0.9 GO:0010218 response to far red light(GO:0010218)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.9 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.6 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 8.6 GO:0006979 response to oxidative stress(GO:0006979)
0.0 0.3 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.1 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 10.5 GO:0016567 protein ubiquitination(GO:0016567)
0.0 0.4 GO:0007031 peroxisome organization(GO:0007031)
0.0 1.8 GO:0009733 response to auxin(GO:0009733)
0.0 5.5 GO:0015031 protein transport(GO:0015031)
0.0 13.9 GO:0006468 protein phosphorylation(GO:0006468)
0.0 0.6 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 6.3 GO:0007165 signal transduction(GO:0007165)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 4.1 GO:0005814 centrosome(GO:0005813) centriole(GO:0005814)
1.2 11.0 GO:0017119 Golgi transport complex(GO:0017119)
0.6 6.9 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.5 2.5 GO:0033263 CORVET complex(GO:0033263)
0.4 1.3 GO:0030689 Noc complex(GO:0030689)
0.4 3.0 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.3 3.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.3 1.6 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.3 2.2 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.3 3.9 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.3 4.9 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.2 1.1 GO:0030062 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.2 3.9 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.2 5.7 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.2 1.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.2 2.1 GO:0031312 extrinsic component of organelle membrane(GO:0031312)
0.2 2.5 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.2 10.7 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.1 3.7 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 1.6 GO:0030904 retromer complex(GO:0030904)
0.1 9.9 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 1.2 GO:0071256 translocon complex(GO:0071256)
0.1 0.5 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 2.0 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 20.0 GO:0099503 secretory vesicle(GO:0099503)
0.1 4.6 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 7.7 GO:0031225 anchored component of membrane(GO:0031225)
0.1 2.3 GO:0031012 extracellular matrix(GO:0031012)
0.1 1.3 GO:0005802 trans-Golgi network(GO:0005802)
0.1 1.8 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.1 0.6 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 1.5 GO:0090404 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.1 0.9 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.1 1.3 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.1 0.7 GO:0000439 core TFIIH complex(GO:0000439)
0.1 0.5 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.2 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 1.7 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.1 0.5 GO:0005787 signal peptidase complex(GO:0005787)
0.1 0.7 GO:0008180 COP9 signalosome(GO:0008180)
0.1 1.1 GO:0042575 DNA polymerase complex(GO:0042575)
0.1 0.6 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.1 3.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 2.1 GO:0009504 cell plate(GO:0009504)
0.1 0.8 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 0.3 GO:0070552 BRISC complex(GO:0070552)
0.1 0.5 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.8 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.8 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 5.4 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 2.8 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 3.7 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 8.8 GO:0005768 endosome(GO:0005768)
0.0 117.1 GO:0005886 plasma membrane(GO:0005886)
0.0 0.4 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.8 GO:0000323 lytic vacuole(GO:0000323) lysosome(GO:0005764)
0.0 0.1 GO:0070847 core mediator complex(GO:0070847)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.2 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 0.7 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.0 1.3 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.9 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.5 GO:0097708 cytoplasmic vesicle(GO:0031410) intracellular vesicle(GO:0097708)
0.0 8.7 GO:0005773 vacuole(GO:0005773)
0.0 5.5 GO:0005783 endoplasmic reticulum(GO:0005783)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.7 8.0 GO:0015204 urea transmembrane transporter activity(GO:0015204)
2.5 12.3 GO:0016768 spermine synthase activity(GO:0016768)
1.5 5.8 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
1.5 8.7 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
1.1 7.7 GO:0019871 ion channel inhibitor activity(GO:0008200) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
1.0 3.0 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.9 6.5 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.8 3.4 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.8 8.2 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.8 5.6 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.6 2.6 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.6 4.4 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.6 2.5 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.6 1.8 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.6 5.2 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.6 6.8 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.6 1.7 GO:0016504 peptidase activator activity(GO:0016504)
0.5 2.7 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.5 10.6 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.5 1.5 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.5 2.0 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.5 1.0 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.5 1.9 GO:0070405 ammonium ion binding(GO:0070405)
0.5 1.4 GO:0030975 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.5 1.4 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.4 1.6 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.4 1.2 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.4 6.1 GO:0004124 cysteine synthase activity(GO:0004124)
0.4 6.7 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.4 1.2 GO:0010331 gibberellin binding(GO:0010331)
0.4 3.1 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.4 4.9 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.4 2.2 GO:0015563 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.4 8.6 GO:0004568 chitinase activity(GO:0004568)
0.3 4.1 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.3 1.3 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.3 1.0 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.3 1.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.3 2.1 GO:0052853 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.3 5.7 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.3 1.6 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.3 1.1 GO:0043546 molybdopterin cofactor binding(GO:0043546)
0.3 3.4 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.3 2.8 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.2 1.7 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.2 1.2 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.2 0.9 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.2 0.7 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.2 0.7 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.2 1.1 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.2 1.1 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.2 5.0 GO:0043424 protein histidine kinase binding(GO:0043424)
0.2 10.8 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.2 11.4 GO:0019901 protein kinase binding(GO:0019901)
0.2 0.9 GO:0047780 citrate dehydratase activity(GO:0047780)
0.2 2.1 GO:0019902 phosphatase binding(GO:0019902)
0.2 0.9 GO:0000702 oxidized base lesion DNA N-glycosylase activity(GO:0000702)
0.2 2.4 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.2 0.5 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 1.5 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.1 0.4 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 8.0 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.1 1.7 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 1.0 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.1 3.3 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.7 GO:0004325 ferrochelatase activity(GO:0004325)
0.1 0.4 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.1 1.8 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 1.9 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 2.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.1 2.8 GO:0008066 glutamate receptor activity(GO:0008066)
0.1 18.2 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.1 0.7 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.1 8.4 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 1.1 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.1 1.8 GO:0008198 ferrous iron binding(GO:0008198)
0.1 4.2 GO:0004707 MAP kinase activity(GO:0004707)
0.1 0.7 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 1.5 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 2.6 GO:0008143 poly(A) binding(GO:0008143)
0.1 4.4 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.1 0.9 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 4.5 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.1 5.5 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.1 6.0 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.1 0.3 GO:0019904 protein domain specific binding(GO:0019904)
0.1 0.3 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 3.4 GO:0045735 nutrient reservoir activity(GO:0045735)
0.1 3.1 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 0.5 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 0.9 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.1 2.5 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.1 1.3 GO:0005249 voltage-gated potassium channel activity(GO:0005249) potassium channel activity(GO:0005267)
0.1 0.4 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.1 10.2 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 0.7 GO:0017136 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.3 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 14.8 GO:0043531 ADP binding(GO:0043531)
0.1 0.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 1.5 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 17.4 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.1 1.4 GO:0015248 sterol transporter activity(GO:0015248)
0.1 9.4 GO:0003779 actin binding(GO:0003779)
0.1 3.5 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.1 1.3 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 0.5 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.9 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 1.0 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 2.1 GO:0033293 monocarboxylic acid binding(GO:0033293)
0.1 3.4 GO:0043621 protein self-association(GO:0043621)
0.1 0.7 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.1 0.2 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.1 2.2 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 1.3 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 0.2 GO:0004046 aminoacylase activity(GO:0004046)
0.1 1.1 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.1 19.6 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 1.8 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 1.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.3 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.0 1.9 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 7.7 GO:0005509 calcium ion binding(GO:0005509)
0.0 1.4 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.6 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 1.4 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.1 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.0 1.2 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.5 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.5 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 1.3 GO:0031072 heat shock protein binding(GO:0031072)
0.0 0.6 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.9 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.5 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.6 GO:0017069 snRNA binding(GO:0017069)
0.0 14.0 GO:0016301 kinase activity(GO:0016301)
0.0 1.7 GO:0016831 carboxy-lyase activity(GO:0016831)
0.0 3.5 GO:0042802 identical protein binding(GO:0042802)
0.0 0.8 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.3 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 19.2 GO:0043565 sequence-specific DNA binding(GO:0043565)
0.0 0.1 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.1 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 1.3 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.3 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 1.6 GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds(GO:0016810)
0.0 0.1 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.0 0.6 GO:0042393 histone binding(GO:0042393)
0.0 9.7 GO:0001071 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 0.6 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.0 1.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.2 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.9 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.5 1.0 ST INTEGRIN SIGNALING PATHWAY Integrin Signaling Pathway
0.1 0.9 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 1.0 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.1 0.5 PID ATM PATHWAY ATM pathway
0.1 0.2 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 4.7 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.9 3.8 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
0.6 2.2 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS Genes involved in Synthesis of bile acids and bile salts
0.4 2.5 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.3 1.0 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.3 0.8 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.2 1.0 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 1.0 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.2 1.4 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.2 0.9 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.1 0.7 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 1.7 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.1 0.6 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 0.2 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.0 0.1 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway