Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT3G26790

Z-value: 4.89

Transcription factors associated with AT3G26790

Gene Symbol Gene ID Gene Info
AT3G26790 AP2/B3-like transcriptional factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
FUS3arTal_v1_Chr3_-_9856212_9856212-0.154.5e-01Click!

Activity profile of AT3G26790 motif

Sorted Z-values of AT3G26790 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_16950705 23.98 AT2G40610.1
expansin A8
Chr1_-_4090857 18.57 AT1G12090.1
extensin-like protein
Chr1_+_10371675 17.13 AT1G29660.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_28053030 17.04 AT1G74670.1
Gibberellin-regulated family protein
Chr3_-_4008018 16.61 AT3G12610.1
Leucine-rich repeat (LRR) family protein
Chr4_+_2449434 16.27 AT4G04840.1
methionine sulfoxide reductase B6
Chr5_+_3644547 15.58 AT5G11420.1
transmembrane protein, putative (Protein of unknown function, DUF642)
Chr3_-_16448844 15.43 AT3G44990.1
xyloglucan endo-transglycosylase-related 8
Chr5_+_21009347 14.53 AT5G51720.1
2 iron, 2 sulfur cluster binding protein
Chr1_-_25049424 14.15 AT1G67090.2
ribulose bisphosphate carboxylase small chain 1A
Chr1_-_25049667 14.15 AT1G67090.1
ribulose bisphosphate carboxylase small chain 1A
Chr5_+_7502427 13.52 AT5G22580.1
Stress responsive A/B Barrel Domain-containing protein
Chr3_-_7557969 13.46 AT3G21460.1
Glutaredoxin family protein
Chr1_+_7252111 13.28 AT1G20850.1
xylem cysteine peptidase 2
Chr1_+_17918207 13.28 AT1G48480.1
receptor-like kinase 1
Chr1_+_7886323 13.21 AT1G22330.1
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_+_26141726 13.14 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
expansin A1
Chr1_-_983544 12.97 AT1G03870.1
FASCICLIN-like arabinoogalactan 9
Chr4_+_620691 12.96 AT4G01460.1
AT4G01460.2
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_3889906 12.92 AT5G12050.1
rho GTPase-activating protein
Chr2_+_1676999 12.86 AT2G04780.2
FASCICLIN-like arabinoogalactan 7
Chr2_+_1676717 12.59 AT2G04780.1
FASCICLIN-like arabinoogalactan 7
Chr4_-_16583075 12.59 AT4G34760.1
SAUR-like auxin-responsive protein family
Chr1_+_418726 12.55 AT1G02205.4
AT1G02205.3
AT1G02205.5
AT1G02205.1
Fatty acid hydroxylase superfamily
Chr5_-_8707885 12.36 AT5G25190.1
Integrase-type DNA-binding superfamily protein
Chr4_-_7857933 12.31 AT4G13500.1
transmembrane protein
Chr1_-_464981 12.10 AT1G02335.1
germin-like protein subfamily 2 member 2 precursor
Chr5_-_990630 11.68 AT5G03760.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_-_15607966 11.50 AT1G41830.1
SKU5-similar 6
Chr5_-_671687 11.29 AT5G02890.1
HXXXD-type acyl-transferase family protein
Chr2_+_14733975 11.21 AT2G34925.1
CLAVATA3/ESR-RELATED 42
Chr1_-_26515188 10.92 AT1G70370.2
AT1G70370.1
polygalacturonase 2
Chr2_+_1594588 10.55 AT2G04570.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_1231452 10.51 AT1G04520.1
plasmodesmata-located protein 2
Chr3_+_6180621 10.39 AT3G18050.1
GPI-anchored protein
Chr5_+_20945676 10.24 AT5G51560.1
Leucine-rich repeat protein kinase family protein
Chr1_+_12851983 10.23 AT1G35140.1
Phosphate-responsive 1 family protein
Chr3_-_2216483 10.20 AT3G07010.1
AT3G07010.2
Pectin lyase-like superfamily protein
Chr4_-_9157133 10.00 AT4G16155.1
dihydrolipoamide dehydrogenase
Chr2_-_12785037 9.73 AT2G29980.2
fatty acid desaturase 3
Chr1_+_29413874 9.69 AT1G78170.1
E3 ubiquitin-protein ligase
Chr2_-_12785190 9.61 AT2G29980.1
fatty acid desaturase 3
Chr4_-_10203469 9.58 AT4G18480.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_+_8931617 9.52 AT4G15680.1
Thioredoxin superfamily protein
Chr4_+_14944129 9.49 AT4G30610.1
alpha/beta-Hydrolases superfamily protein
Chr4_+_12876822 9.43 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
magnesium-protoporphyrin IX methyltransferase
Chr1_+_418416 9.41 AT1G02205.2
Fatty acid hydroxylase superfamily
Chr1_-_11872926 9.40 AT1G32780.1
GroES-like zinc-binding dehydrogenase family protein
Chr4_+_16708552 9.35 AT4G35100.2
plasma membrane intrinsic protein 3
Chr4_+_16708361 9.34 AT4G35100.1
plasma membrane intrinsic protein 3
Chr3_+_8194606 9.22 AT3G23050.1
AT3G23050.3
AT3G23050.2
indole-3-acetic acid 7
Chr1_+_1136078 9.15 AT1G04250.1
AUX/IAA transcriptional regulator family protein
Chr5_-_345457 8.86 AT5G01890.1
Leucine-rich receptor-like protein kinase family protein
Chr5_-_7419335 8.83 AT5G22390.1
FANTASTIC four-like protein (DUF3049)
Chr1_+_5602786 8.78 AT1G16390.1
organic cation/carnitine transporter 3
Chr5_+_22530007 8.78 AT5G55620.1
hypothetical protein
Chr1_+_17065858 8.70 AT1G45130.2
beta-galactosidase 5
Chr5_+_15957368 8.62 AT5G39860.1
basic helix-loop-helix (bHLH) DNA-binding family protein
Chr4_+_17986384 8.61 AT4G38430.1
rho guanyl-nucleotide exchange factor 1
Chr2_-_1861934 8.60 AT2G05160.3
AT2G05160.1
AT2G05160.2
CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
Chr5_+_25016860 8.57 AT5G62280.1
DUF1442 family protein (DUF1442)
Chr1_-_3518035 8.53 AT1G10640.1
Pectin lyase-like superfamily protein
Chr4_+_14192569 8.50 AT4G28720.1
Flavin-binding monooxygenase family protein
Chr3_-_2168960 8.49 AT3G06870.1
proline-rich family protein
Chr1_-_6278150 8.48 AT1G18250.2
AT1G18250.1
Pathogenesis-related thaumatin superfamily protein
Chr1_+_17065111 8.39 AT1G45130.1
beta-galactosidase 5
Chr1_-_17133809 8.37 AT1G45207.3
Remorin family protein
Chr2_+_19469571 8.37 AT2G47440.2
AT2G47440.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_-_407142 8.31 AT4G00950.1
hypothetical protein (DUF688)
Chr3_-_9255083 8.11 AT3G25500.1
formin homology 1
Chr5_-_3709403 8.11 AT5G11550.1
ARM repeat superfamily protein
Chr1_+_1843463 8.10 AT1G06080.1
AT1G06080.2
delta 9 desaturase 1
Chr4_-_14002069 8.02 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
expansin B3
Chr3_+_5676749 8.00 AT3G16660.2
AT3G16660.1
Pollen Ole e 1 allergen and extensin family protein
Chr2_-_12965723 7.97 AT2G30424.2
AT2G30424.3
AT2G30424.1
Homeodomain-like superfamily protein
Chr5_+_25159208 7.86 AT5G62670.1
H[+]-ATPase 11
Chr2_-_5776289 7.85 AT2G13820.2
AT2G13820.1
AT2G13820.3
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_8470179 7.83 AT4G14750.2
AT4G14750.3
AT4G14750.1
IQ-domain 19
Chr5_+_26572265 7.80 AT5G66580.1
hypothetical protein
Chr4_-_846792 7.80 AT4G01950.1
AT4G01950.2
glycerol-3-phosphate acyltransferase 3
Chr4_+_10949573 7.74 AT4G20270.1
Leucine-rich receptor-like protein kinase family protein
Chr4_-_11885533 7.72 AT4G22570.2
AT4G22570.1
adenine phosphoribosyl transferase 3
Chr3_-_22322661 7.63 AT3G60390.1
homeobox-leucine zipper protein 3
Chr5_+_21226721 7.63 AT5G52280.1
Myosin heavy chain-related protein
Chr2_+_16745628 7.60 AT2G40100.1
AT2G40100.2
light harvesting complex photosystem II
Chr1_-_17133548 7.60 AT1G45207.2
Remorin family protein
Chr1_+_19879405 7.55 AT1G53300.1
tetratricopetide-repeat thioredoxin-like 1
Chr4_-_8016582 7.51 AT4G13840.1
HXXXD-type acyl-transferase family protein
Chr3_-_8290164 7.50 AT3G23230.1
Integrase-type DNA-binding superfamily protein
Chr3_-_21760390 7.43 AT3G58850.1
phy rapidly regulated 2
Chr2_-_444324 7.40 AT2G01950.1
BRI1-like 2
Chr1_-_6959148 7.39 AT1G20070.1
hypothetical protein
Chr1_-_12130444 7.34 AT1G33440.1
Major facilitator superfamily protein
Chr1_+_26964087 7.29 AT1G71695.1
Peroxidase superfamily protein
Chr4_-_1230164 7.14 AT4G02770.1
photosystem I subunit D-1
Chr3_-_8058764 7.06 AT3G22790.3
AT3G22790.2
Kinase interacting (KIP1-like) family protein
Chr4_+_7336330 7.04 AT4G12390.1
pectin methylesterase inhibitor 1
Chr5_+_26061165 6.97 AT5G65220.1
Ribosomal L29 family protein
Chr1_+_29178705 6.96 AT1G77640.1
Integrase-type DNA-binding superfamily protein
Chr4_-_12068538 6.93 AT4G23020.2
AT4G23020.1
hypothetical protein
Chr4_+_7548765 6.89 AT4G12900.1
Gamma interferon responsive lysosomal thiol (GILT) reductase family protein
Chr4_-_2673243 6.87 AT4G05180.1
AT4G05180.2
photosystem II subunit Q-2
Chr3_+_7812861 6.86 AT3G22150.2
AT3G22150.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_+_8934296 6.81 AT4G15690.1
Thioredoxin superfamily protein
Chr2_+_12000239 6.75 AT2G28150.2
AT2G28150.3
UPSTREAM OF FLC protein (DUF966)
Chr3_+_19037140 6.75 AT3G51280.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_21680027 6.67 AT3G58620.1
AT3G58620.2
tetratricopetide-repeat thioredoxin-like 4
Chr3_+_10517977 6.65 AT3G28200.1
Peroxidase superfamily protein
Chr1_-_9024081 6.63 AT1G26100.1
Cytochrome b561/ferric reductase transmembrane protein family
Chr4_+_8360996 6.61 AT4G14560.1
indole-3-acetic acid inducible
Chr3_-_7434743 6.60 AT3G21190.1
O-fucosyltransferase family protein
Chr5_+_7676938 6.58 AT5G22940.2
glucuronoxylan glucuronosyltransferase, putative
Chr4_-_11176881 6.54 AT4G20870.1
AT4G20870.2
fatty acid hydroxylase 2
Chr1_-_6213591 6.54 AT1G18060.1
microbial collagenase
Chr1_+_20048434 6.45 AT1G53700.1
WAG 1
Chr4_+_17254290 6.41 AT4G36570.1
RAD-like 3
Chr2_-_13120199 6.39 AT2G30790.1
photosystem II subunit P-2
Chr1_-_5265103 6.39 AT1G15290.2
AT1G15290.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_19412019 6.34 AT3G52360.1
transmembrane protein
Chr5_+_7676662 6.30 AT5G22940.1
glucuronoxylan glucuronosyltransferase, putative
Chr4_-_9754161 6.26 AT4G17490.1
ethylene responsive element binding factor 6
Chr5_-_3963624 6.20 AT5G12250.1
beta-6 tubulin
Chr2_-_11459481 6.18 AT2G26870.1
non-specific phospholipase C2
Chr4_-_18358980 6.16 AT4G39460.2
AT4G39460.3
AT4G39460.1
S-adenosylmethionine carrier 1
Chr4_-_9241384 6.10 AT4G16340.2
guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein
Chr5_-_17650375 6.09 AT5G43890.1
Flavin-binding monooxygenase family protein
Chr2_+_10842863 6.09 AT2G25480.2
AT2G25480.1
TPX2 (targeting protein for Xklp2) protein family
Chr4_-_9241629 6.08 AT4G16340.1
guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein
Chr4_+_1440146 6.06 AT4G03280.1
AT4G03280.2
photosynthetic electron transfer C
Chr3_-_5227935 6.04 AT3G15480.1
fiber (DUF1218)
Chr2_-_10277266 6.03 AT2G24170.1
AT2G24170.2
Endomembrane protein 70 protein family
Chr3_-_16740546 6.02 AT3G45610.1
Dof-type zinc finger DNA-binding family protein
Chr5_+_1399395 5.99 AT5G04820.1
ovate family protein 13
Chr2_+_11999736 5.96 AT2G28150.1
UPSTREAM OF FLC protein (DUF966)
Chr5_-_6184038 5.96 AT5G18600.1
Thioredoxin superfamily protein
Chr4_-_15868650 5.90 AT4G32880.1
homeobox-leucine zipper protein ATHB-8
Chr1_+_8212556 5.86 AT1G23170.2
transmembrane protein (Protein of unknown function DUF2359, transmembrane)
Chr5_-_14808275 5.84 AT5G37360.1
LOW protein: ammonium transporter 1-like protein
Chr3_+_5344989 5.83 AT3G15800.1
Glycosyl hydrolase superfamily protein
Chr2_-_13285666 5.78 AT2G31170.2
AT2G31170.1
Cysteinyl-tRNA synthetase, class Ia family protein
Chr4_+_15875342 5.69 AT4G32890.1
GATA transcription factor 9
Chr3_-_2664834 5.63 AT3G08770.2
AT3G08770.1
lipid transfer protein 6
Chr1_+_20286856 5.60 AT1G54350.1
ABC transporter family protein
Chr5_-_7859201 5.56 AT5G23350.1
GRAM domain protein/ABA-responsive-like protein
Chr3_-_8058086 5.53 AT3G22790.1
Kinase interacting (KIP1-like) family protein
Chr1_+_17224720 5.49 AT1G46264.1
heat shock transcription factor B4
Chr5_-_19272892 5.48 AT5G47500.1
Pectin lyase-like superfamily protein
Chr1_+_8212724 5.46 AT1G23170.1
transmembrane protein (Protein of unknown function DUF2359, transmembrane)
Chr1_-_17651791 5.45 AT1G47900.1
filament-like protein (DUF869)
Chr5_-_17755742 5.44 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_4095246 5.40 AT1G12100.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_22351780 5.40 AT1G60690.1
NAD(P)-linked oxidoreductase superfamily protein
Chr4_+_18121526 5.39 AT4G38825.1
SAUR-like auxin-responsive protein family
Chr3_-_19658124 5.36 AT3G53010.1
carbohydrate esterase, putative (DUF303)
Chr5_+_20993424 5.34 AT5G51670.1
AT5G51670.2
hypothetical protein (DUF668)
Chr1_-_17651126 5.29 AT1G47900.3
filament-like protein (DUF869)
Chr3_+_23401963 5.27 AT3G63370.1
AT3G63370.2
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_+_9259511 5.27 AT2G21650.1
Homeodomain-like superfamily protein
Chr4_-_10572412 5.26 AT4G19380.1
AT4G19380.2
Long-chain fatty alcohol dehydrogenase family protein
Chr2_-_13284717 5.25 AT2G31170.3
Cysteinyl-tRNA synthetase, class Ia family protein
Chr2_+_18537177 5.24 AT2G44940.1
Integrase-type DNA-binding superfamily protein
Chr1_-_17651425 5.20 AT1G47900.2
filament-like protein (DUF869)
Chr3_+_4510965 5.19 AT3G13750.1
beta galactosidase 1
Chr1_+_6184717 5.17 AT1G17970.1
AT1G17970.2
RING/U-box superfamily protein
Chr3_+_18422542 5.16 AT3G49680.1
AT3G49680.2
branched-chain aminotransferase 3
Chr2_+_8183638 5.14 AT2G18890.1
AT2G18890.3
Protein kinase superfamily protein
Chr1_+_8922416 5.10 AT1G25425.1
CLAVATA3/ESR-RELATED 43
Chr3_-_4769936 5.10 AT3G14300.1
pectinesterase family protein
Chr5_+_6493826 5.02 AT5G19290.1
alpha/beta-Hydrolases superfamily protein
Chr5_-_18899646 5.01 AT5G46580.1
pentatricopeptide (PPR) repeat-containing protein
Chr3_-_8393467 4.94 AT3G23430.1
phosphate 1
Chr4_+_13985023 4.88 AT4G28190.2
Developmental regulator, ULTRAPETALA
Chr3_+_17905725 4.87 AT3G48350.2
AT3G48350.1
Cysteine proteinases superfamily protein
Chr1_-_8296923 4.83 AT1G23360.2
AT1G23360.3
AT1G23360.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_-_19361162 4.82 AT2G47160.2
HCO3- transporter family
Chr3_-_8554839 4.81 AT3G23740.1
hypothetical protein
Chr1_-_28383769 4.80 AT1G75590.1
SAUR-like auxin-responsive protein family
Chr2_-_12685145 4.79 AT2G29670.2
AT2G29670.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_19361328 4.78 AT2G47160.1
HCO3- transporter family
Chr1_+_8327066 4.77 AT1G23460.1
Pectin lyase-like superfamily protein
Chr4_+_17201922 4.77 AT4G36410.1
ubiquitin-conjugating enzyme 17
Chr2_-_19407098 4.73 AT2G47260.1
WRKY DNA-binding protein 23
Chr2_-_16649527 4.72 AT2G39880.1
myb domain protein 25
Chr2_+_13704068 4.70 AT2G32270.1
zinc transporter 3 precursor
Chr5_+_23571835 4.70 AT5G58300.1
Leucine-rich repeat protein kinase family protein
Chr2_-_16818730 4.70 AT2G40260.2
AT2G40260.1
Homeodomain-like superfamily protein
Chr3_-_6421983 4.69 AT3G18660.1
AT3G18660.3
AT3G18660.2
plant glycogenin-like starch initiation protein 1
Chr4_+_17691687 4.65 AT4G37650.1
GRAS family transcription factor
Chr2_+_15972876 4.61 AT2G38120.1
AT2G38120.2
Transmembrane amino acid transporter family protein
Chr3_-_20315164 4.61 AT3G54830.1
Transmembrane amino acid transporter family protein
Chr1_-_12590223 4.61 AT1G34430.1
2-oxoacid dehydrogenases acyltransferase family protein
Chr2_-_12415661 4.61 AT2G28900.1
outer plastid envelope protein 16-1
Chr5_+_23572341 4.60 AT5G58300.3
Leucine-rich repeat protein kinase family protein
Chr4_+_17472980 4.60 AT4G37080.4
AT4G37080.3
ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547)
Chr5_-_1207679 4.58 AT5G04310.2
AT5G04310.3
Pectin lyase-like superfamily protein
Chr4_+_13984695 4.58 AT4G28190.1
Developmental regulator, ULTRAPETALA
Chr1_+_8326747 4.56 AT1G23460.2
Pectin lyase-like superfamily protein
Chr3_-_18277605 4.56 AT3G49300.1
proline-rich family protein
Chr2_-_5709017 4.53 AT2G13690.1
PRLI-interacting factor
Chr3_+_3076781 4.53 AT3G10000.2
AT3G10000.1
Homeodomain-like superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G26790

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.7 11.0 GO:0042407 cristae formation(GO:0042407)
3.7 22.0 GO:0043447 alkane biosynthetic process(GO:0043447)
3.6 17.8 GO:0010080 regulation of floral meristem growth(GO:0010080)
2.8 11.3 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
2.8 16.6 GO:0009650 UV protection(GO:0009650)
2.7 8.0 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
2.4 46.1 GO:0006949 syncytium formation(GO:0006949)
2.3 9.2 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
2.2 8.7 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
1.9 9.6 GO:0046713 borate transport(GO:0046713)
1.9 13.3 GO:0010623 programmed cell death involved in cell development(GO:0010623)
1.8 7.4 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
1.6 8.1 GO:0051016 barbed-end actin filament capping(GO:0051016)
1.6 11.2 GO:0090506 axillary shoot meristem initiation(GO:0090506)
1.6 4.7 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
1.5 4.6 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
1.5 6.0 GO:0048462 carpel formation(GO:0048462)
1.5 22.6 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
1.5 7.5 GO:0031022 nuclear migration along microfilament(GO:0031022)
1.4 4.3 GO:0009915 phloem sucrose loading(GO:0009915)
1.4 10.1 GO:0010067 procambium histogenesis(GO:0010067)
1.4 5.8 GO:0015669 gas transport(GO:0015669)
1.4 12.9 GO:0046294 formaldehyde catabolic process(GO:0046294)
1.4 8.6 GO:0051098 regulation of binding(GO:0051098)
1.4 8.1 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
1.4 17.6 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
1.3 3.9 GO:0090392 sepal giant cell differentiation(GO:0090392)
1.3 3.9 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
1.1 4.4 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
1.1 6.6 GO:0097502 mannosylation(GO:0097502)
1.1 3.2 GO:2000692 negative regulation of seed maturation(GO:2000692)
1.1 11.6 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
1.1 24.3 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
1.0 11.5 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
1.0 3.1 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
1.0 6.0 GO:0090057 root radial pattern formation(GO:0090057)
1.0 5.0 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
1.0 8.8 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.9 17.0 GO:0009750 response to fructose(GO:0009750)
0.9 3.8 GO:0015675 nickel cation transport(GO:0015675)
0.9 3.7 GO:0071312 response to caffeine(GO:0031000) response to alkaloid(GO:0043279) cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.9 2.7 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.9 15.4 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.9 1.8 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.9 6.3 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.9 3.6 GO:0009660 amyloplast organization(GO:0009660)
0.9 6.2 GO:0072337 modified amino acid transport(GO:0072337)
0.9 1.7 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.9 2.6 GO:1903890 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.9 2.6 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.9 7.7 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.8 3.3 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.8 3.3 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322) negative regulation of isoprenoid metabolic process(GO:0045827)
0.8 4.9 GO:0090548 response to nitrate starvation(GO:0090548)
0.8 5.6 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.8 3.1 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.8 2.3 GO:0007000 nucleolus organization(GO:0007000)
0.8 54.7 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.8 2.3 GO:0080178 5-carbamoylmethyl uridine residue modification(GO:0080178)
0.7 2.2 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.7 5.0 GO:0051952 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.7 6.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.7 5.4 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.7 3.3 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.7 14.0 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.7 2.7 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.7 2.6 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.7 12.4 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.6 3.2 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.6 2.6 GO:0090603 sieve element differentiation(GO:0090603)
0.6 2.4 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.6 4.2 GO:0080117 secondary growth(GO:0080117)
0.6 4.2 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.6 3.5 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.6 9.2 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.6 3.4 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.6 10.0 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.6 3.3 GO:0000727 double-strand break repair via break-induced replication(GO:0000727)
0.6 7.7 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.6 6.1 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.5 2.2 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.5 16.0 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.5 2.5 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.5 3.5 GO:0044211 CTP salvage(GO:0044211)
0.5 3.4 GO:0045492 xylan biosynthetic process(GO:0045492)
0.5 2.4 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.5 30.8 GO:0007018 microtubule-based movement(GO:0007018)
0.5 1.4 GO:0001192 maintenance of transcriptional fidelity during DNA-templated transcription elongation(GO:0001192) maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter(GO:0001193)
0.4 1.8 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.4 4.9 GO:0010161 red light signaling pathway(GO:0010161)
0.4 1.7 GO:0071480 cellular response to gamma radiation(GO:0071480)
0.4 13.3 GO:0009685 gibberellin metabolic process(GO:0009685)
0.4 1.7 GO:0080168 abscisic acid transport(GO:0080168)
0.4 10.7 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.4 1.6 GO:0071431 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.4 4.0 GO:0030026 cellular manganese ion homeostasis(GO:0030026)
0.4 5.4 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.4 1.5 GO:1902475 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938) L-alpha-amino acid transmembrane transport(GO:1902475)
0.4 3.4 GO:0071249 cellular response to nitrate(GO:0071249)
0.4 10.2 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.4 8.9 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.4 1.1 GO:0031054 pre-miRNA processing(GO:0031054)
0.4 7.6 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.4 2.5 GO:0019632 shikimate metabolic process(GO:0019632)
0.4 3.9 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.4 1.1 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.4 1.4 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.4 1.8 GO:1902025 nitrate import(GO:1902025)
0.3 30.7 GO:0045490 pectin catabolic process(GO:0045490)
0.3 1.0 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.3 2.4 GO:0010018 far-red light signaling pathway(GO:0010018)
0.3 0.7 GO:0048451 petal formation(GO:0048451)
0.3 3.1 GO:0006814 sodium ion transport(GO:0006814)
0.3 1.4 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.3 5.8 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.3 7.1 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.3 1.7 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.3 1.3 GO:0006741 NADP biosynthetic process(GO:0006741)
0.3 25.1 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.3 1.5 GO:0035627 ceramide transport(GO:0035627)
0.3 2.4 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.3 1.5 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.3 0.9 GO:0080051 cutin transport(GO:0080051)
0.3 1.2 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.3 4.0 GO:0006265 DNA topological change(GO:0006265)
0.3 2.9 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.3 4.3 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.3 1.4 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.3 2.5 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.3 5.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.3 1.9 GO:0006559 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.3 1.1 GO:0015739 sialic acid transport(GO:0015739)
0.3 46.4 GO:0015979 photosynthesis(GO:0015979)
0.3 6.9 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.3 3.2 GO:0008216 spermidine metabolic process(GO:0008216)
0.3 4.8 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.3 7.8 GO:0010075 regulation of meristem growth(GO:0010075)
0.3 1.3 GO:0009819 drought recovery(GO:0009819)
0.2 2.0 GO:0043486 histone exchange(GO:0043486)
0.2 1.7 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.2 0.7 GO:0010028 xanthophyll cycle(GO:0010028)
0.2 4.8 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.2 12.0 GO:0048825 cotyledon development(GO:0048825)
0.2 11.4 GO:0010119 regulation of stomatal movement(GO:0010119)
0.2 1.4 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.2 16.6 GO:0071367 cellular response to brassinosteroid stimulus(GO:0071367)
0.2 0.7 GO:2000082 regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.2 4.5 GO:0010187 negative regulation of seed germination(GO:0010187)
0.2 7.9 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.2 5.4 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.2 1.7 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.2 7.2 GO:0043622 cortical microtubule organization(GO:0043622)
0.2 1.4 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.2 0.2 GO:0009209 CTP biosynthetic process(GO:0006241) pyrimidine ribonucleoside triphosphate metabolic process(GO:0009208) pyrimidine ribonucleoside triphosphate biosynthetic process(GO:0009209) CTP metabolic process(GO:0046036)
0.2 8.3 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.2 4.6 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.2 3.6 GO:0009756 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.2 3.4 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.2 7.6 GO:1901421 positive regulation of abscisic acid-activated signaling pathway(GO:0009789) positive regulation of response to alcohol(GO:1901421)
0.2 3.4 GO:0019915 lipid storage(GO:0019915)
0.2 2.7 GO:0001709 cell fate determination(GO:0001709)
0.2 4.7 GO:0008356 asymmetric cell division(GO:0008356)
0.2 4.1 GO:0010143 cutin biosynthetic process(GO:0010143)
0.2 1.8 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.2 1.7 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.2 2.4 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.2 5.2 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.2 1.2 GO:0010449 root meristem growth(GO:0010449)
0.2 1.5 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.2 2.0 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.2 3.6 GO:0006817 phosphate ion transport(GO:0006817)
0.2 2.3 GO:0009299 mRNA transcription(GO:0009299)
0.2 4.1 GO:0055072 iron ion homeostasis(GO:0055072)
0.1 4.9 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 1.7 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.1 19.8 GO:0048511 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.1 0.6 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 1.9 GO:0006521 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.1 1.6 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.1 3.7 GO:0006885 regulation of pH(GO:0006885)
0.1 0.1 GO:0071481 cellular response to X-ray(GO:0071481)
0.1 0.5 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 1.9 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.1 1.5 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 3.0 GO:0010162 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.1 3.3 GO:0010114 response to red light(GO:0010114)
0.1 0.7 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.1 2.9 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.1 0.9 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 3.3 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.1 0.8 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.1 1.3 GO:0010216 maintenance of DNA methylation(GO:0010216)
0.1 4.2 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 5.6 GO:0019722 calcium-mediated signaling(GO:0019722)
0.1 1.4 GO:2000280 regulation of root development(GO:2000280)
0.1 0.8 GO:0046688 response to copper ion(GO:0046688)
0.1 1.4 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.4 GO:0009303 rRNA transcription(GO:0009303)
0.1 1.2 GO:0010227 floral organ abscission(GO:0010227)
0.1 5.4 GO:0000226 microtubule cytoskeleton organization(GO:0000226)
0.1 0.8 GO:0015743 malate transport(GO:0015743)
0.1 0.6 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.1 7.0 GO:0009860 pollen tube growth(GO:0009860)
0.1 0.5 GO:0036065 fucosylation(GO:0036065)
0.1 0.2 GO:0048655 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655)
0.0 0.1 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.9 GO:0071804 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0 0.4 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 1.3 GO:0098732 macromolecule deacylation(GO:0098732)
0.0 7.4 GO:0032259 methylation(GO:0032259)
0.0 0.9 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.5 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.6 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 1.0 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.6 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 1.2 GO:0048481 plant ovule development(GO:0048481)
0.0 0.6 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.9 GO:0006869 lipid transport(GO:0006869)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
3.2 9.6 GO:0043674 lateral plasma membrane(GO:0016328) pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
1.9 9.6 GO:0010007 magnesium chelatase complex(GO:0010007)
1.2 12.2 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.9 7.1 GO:0009538 photosystem I reaction center(GO:0009538)
0.9 2.7 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.9 2.6 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.8 3.2 GO:0032807 DNA ligase IV complex(GO:0032807)
0.7 2.0 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.6 41.6 GO:0031977 thylakoid lumen(GO:0031977)
0.6 3.9 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.5 2.2 GO:0070505 pollen coat(GO:0070505)
0.5 10.0 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.5 82.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.5 2.6 GO:0030139 endocytic vesicle(GO:0030139)
0.5 7.2 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.5 1.5 GO:0009501 amyloplast(GO:0009501)
0.5 2.9 GO:0000796 condensin complex(GO:0000796)
0.5 10.7 GO:0016324 apical plasma membrane(GO:0016324)
0.4 1.7 GO:0030870 Mre11 complex(GO:0030870)
0.4 2.0 GO:0000812 Swr1 complex(GO:0000812)
0.4 1.5 GO:1902495 transmembrane transporter complex(GO:1902495)
0.4 8.9 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.4 1.1 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.3 66.4 GO:0009505 plant-type cell wall(GO:0009505)
0.3 5.3 GO:0070069 cytochrome complex(GO:0070069)
0.3 19.4 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.3 2.3 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.3 4.6 GO:0009986 cell surface(GO:0009986)
0.3 1.4 GO:0005828 kinetochore microtubule(GO:0005828)
0.3 2.1 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.3 1.8 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.2 23.9 GO:0005615 extracellular space(GO:0005615)
0.2 1.4 GO:0009360 DNA polymerase III complex(GO:0009360)
0.2 3.6 GO:0072686 mitotic spindle(GO:0072686)
0.2 11.9 GO:0010287 plastoglobule(GO:0010287)
0.2 38.4 GO:0048046 apoplast(GO:0048046)
0.1 3.4 GO:0005871 kinesin complex(GO:0005871)
0.1 6.6 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 9.6 GO:0005874 microtubule(GO:0005874)
0.1 10.1 GO:0010008 endosome membrane(GO:0010008)
0.1 32.7 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 0.9 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 3.5 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 21.2 GO:0009941 chloroplast envelope(GO:0009941)
0.1 39.9 GO:0009570 chloroplast stroma(GO:0009570)
0.1 9.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 1.9 GO:0005875 microtubule associated complex(GO:0005875)
0.1 14.8 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.1 1.1 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.1 0.9 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 2.0 GO:0032040 small-subunit processome(GO:0032040)
0.0 4.4 GO:0043656 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 1.3 GO:0005938 cell cortex(GO:0005938) cytoplasmic region(GO:0099568)
0.0 0.8 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.1 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 8.0 GO:0009506 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
7.3 22.0 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
4.7 28.3 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
2.8 11.0 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
2.2 6.5 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
2.2 8.7 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
2.1 27.4 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
2.0 8.1 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
2.0 10.0 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
1.9 15.4 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
1.9 9.6 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
1.7 5.1 GO:0047912 galacturonokinase activity(GO:0047912)
1.7 20.0 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
1.6 12.9 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
1.6 6.4 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
1.6 9.6 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
1.5 4.6 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
1.5 7.4 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
1.4 5.6 GO:0015245 fatty acid transporter activity(GO:0015245)
1.3 14.5 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
1.3 26.4 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
1.2 5.0 GO:0004075 biotin carboxylase activity(GO:0004075)
1.2 9.8 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
1.2 7.0 GO:0051723 protein methylesterase activity(GO:0051723)
1.2 4.7 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
1.2 3.5 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
1.1 6.9 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
1.1 3.2 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
1.1 5.3 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
1.0 20.8 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
1.0 3.1 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) gamma-aminobutyric acid transmembrane transporter activity(GO:0015185) alanine transmembrane transporter activity(GO:0022858)
1.0 4.0 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
1.0 11.7 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
1.0 7.7 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.9 23.4 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.9 7.3 GO:0019137 thioglucosidase activity(GO:0019137)
0.9 22.8 GO:0004565 beta-galactosidase activity(GO:0004565)
0.9 2.7 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.8 3.4 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.8 6.9 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.8 6.2 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.8 2.3 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.8 6.0 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.7 2.2 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.7 2.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.7 7.1 GO:0009378 four-way junction helicase activity(GO:0009378)
0.7 4.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.7 2.0 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.6 5.1 GO:0008083 growth factor activity(GO:0008083)
0.6 2.4 GO:0052659 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.6 2.4 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.6 4.8 GO:0005536 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.6 6.6 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.6 7.6 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.6 1.7 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.6 4.6 GO:0010011 auxin binding(GO:0010011) auxin influx transmembrane transporter activity(GO:0010328)
0.6 5.7 GO:0008169 C-methyltransferase activity(GO:0008169)
0.6 3.4 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.6 3.9 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.5 1.6 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.5 10.0 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.5 9.3 GO:0003725 double-stranded RNA binding(GO:0003725)
0.5 2.5 GO:0004765 shikimate kinase activity(GO:0004765)
0.5 36.8 GO:0003777 microtubule motor activity(GO:0003777)
0.5 3.5 GO:0004849 uridine kinase activity(GO:0004849)
0.5 3.4 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.5 2.4 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.5 3.4 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.5 2.8 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.4 3.1 GO:0050551 myrcene synthase activity(GO:0050551)
0.4 6.2 GO:0004629 phospholipase C activity(GO:0004629)
0.4 19.1 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.4 1.2 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.4 15.0 GO:0008171 O-methyltransferase activity(GO:0008171)
0.4 7.2 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.4 15.6 GO:0045735 nutrient reservoir activity(GO:0045735)
0.4 4.0 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.4 2.5 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.4 1.8 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.3 1.3 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.3 2.3 GO:0048487 beta-tubulin binding(GO:0048487)
0.3 1.6 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.3 2.6 GO:0017116 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.3 1.5 GO:1902387 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.3 7.6 GO:0016168 chlorophyll binding(GO:0016168)
0.3 3.5 GO:0003996 acyl-CoA ligase activity(GO:0003996)
0.3 7.7 GO:0008810 cellulase activity(GO:0008810)
0.3 3.4 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.3 0.6 GO:0052381 tRNA dimethylallyltransferase activity(GO:0052381)
0.3 1.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.3 2.4 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.3 1.1 GO:0019534 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.3 1.0 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.3 2.8 GO:0033613 activating transcription factor binding(GO:0033613)
0.2 1.9 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.2 1.9 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.2 7.8 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.2 8.2 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.2 5.1 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 1.3 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 14.8 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.2 2.6 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.2 1.4 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.2 1.7 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.2 3.3 GO:0016844 strictosidine synthase activity(GO:0016844)
0.2 9.4 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.2 1.7 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.2 2.1 GO:0000036 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.2 2.2 GO:0016872 intramolecular lyase activity(GO:0016872)
0.2 1.5 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1 1.0 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 1.2 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 1.0 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 2.0 GO:0017025 TBP-class protein binding(GO:0017025)
0.1 0.4 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.1 3.7 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.1 4.9 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 1.0 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 2.7 GO:0031386 protein tag(GO:0031386)
0.1 0.7 GO:0004126 cytidine deaminase activity(GO:0004126)
0.1 1.2 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.5 GO:0003785 actin monomer binding(GO:0003785)
0.1 0.7 GO:0051183 vitamin transporter activity(GO:0051183)
0.1 1.4 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 7.3 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.1 0.9 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 4.8 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1 1.9 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.4 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 4.4 GO:0003993 acid phosphatase activity(GO:0003993)
0.1 2.0 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 1.0 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 2.0 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 2.4 GO:0009975 cyclase activity(GO:0009975)
0.1 1.1 GO:0008097 5S rRNA binding(GO:0008097)
0.1 5.7 GO:0030599 pectinesterase activity(GO:0030599)
0.1 6.2 GO:0008017 microtubule binding(GO:0008017)
0.1 8.3 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 12.9 GO:0005507 copper ion binding(GO:0005507)
0.1 1.6 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.1 0.4 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.9 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 0.9 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.1 2.7 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 3.1 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.1 0.2 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 1.6 GO:0005179 hormone activity(GO:0005179)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.5 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 1.7 GO:0008094 DNA-dependent ATPase activity(GO:0008094)
0.0 10.8 GO:0042802 identical protein binding(GO:0042802)
0.0 3.3 GO:0003724 RNA helicase activity(GO:0003724)
0.0 1.1 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 2.9 GO:0016410 N-acyltransferase activity(GO:0016410)
0.0 1.4 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 1.2 GO:0016597 amino acid binding(GO:0016597)
0.0 2.0 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 1.7 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 1.3 GO:0016790 thiolester hydrolase activity(GO:0016790)
0.0 0.1 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 1.2 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 3.3 GO:0016779 nucleotidyltransferase activity(GO:0016779)
0.0 41.6 GO:0001071 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 0.3 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 5.7 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 1.4 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 2.5 GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups(GO:0016765)
0.0 2.1 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.1 GO:0009922 fatty acid elongase activity(GO:0009922)
0.0 0.3 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.2 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 2.1 GO:0043531 ADP binding(GO:0043531)
0.0 2.9 GO:0005509 calcium ion binding(GO:0005509)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
5.5 22.0 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
1.1 4.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.5 4.9 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.5 1.0 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.4 3.2 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.3 1.6 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.3 1.5 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.1 1.2 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 4.3 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
1.2 3.6 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
1.1 22.0 REACTOME DEVELOPMENTAL BIOLOGY Genes involved in Developmental Biology
0.6 2.8 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.6 7.8 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.3 1.6 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.2 1.8 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.2 1.2 REACTOME G1 PHASE Genes involved in G1 Phase