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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G24520

Z-value: 1.16

Transcription factors associated with AT3G24520

Gene Symbol Gene ID Gene Info
AT3G24520 heat shock transcription factor C1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HSFC1arTal_v1_Chr3_+_8941066_89410660.106.3e-01Click!

Activity profile of AT3G24520 motif

Sorted Z-values of AT3G24520 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_3197457 4.60 AT3G10320.1
Glycosyltransferase family 61 protein
Chr1_+_2984829 4.51 AT1G09240.1
nicotianamine synthase 3
Chr4_-_12337599 4.47 AT4G23680.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_-_27548282 4.36 AT1G73260.1
kunitz trypsin inhibitor 1
Chr3_+_19239305 4.08 AT3G51860.1
AT3G51860.2
cation exchanger 3
Chr3_+_17724400 4.07 AT3G48020.1
hypothetical protein
Chr2_-_18646606 3.88 AT2G45220.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_6089381 3.80 AT3G17790.1
purple acid phosphatase 17
Chr1_-_4571229 3.63 AT1G13340.1
Regulator of Vps4 activity in the MVB pathway protein
Chr5_+_5995479 3.58 AT5G18130.2
transmembrane protein
Chr5_+_5995323 3.56 AT5G18130.1
transmembrane protein
Chr3_+_9892791 3.55 AT3G26840.1
Esterase/lipase/thioesterase family protein
Chr1_-_19698482 3.50 AT1G52890.1
NAC domain containing protein 19
Chr2_-_11980003 3.48 AT2G28110.1
Exostosin family protein
Chr1_+_4794664 3.46 AT1G13990.1
AT1G13990.2
AT1G13990.3
plant/protein
Chr3_+_4603885 3.43 AT3G13950.1
ankyrin
Chr2_-_14541617 3.43 AT2G34500.1
cytochrome P450, family 710, subfamily A, polypeptide 1
Chr1_-_513698 3.37 AT1G02470.2
AT1G02470.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr3_-_3993886 3.24 AT3G12580.1
heat shock protein 70
Chr1_+_25473544 3.21 AT1G67920.1
hypothetical protein
Chr4_+_7304323 3.17 AT4G12290.2
Copper amine oxidase family protein
Chr4_+_7303985 3.15 AT4G12290.1
Copper amine oxidase family protein
Chr4_-_16344818 3.12 AT4G34131.1
UDP-glucosyl transferase 73B3
Chr4_-_11588373 3.12 AT4G21840.1
methionine sulfoxide reductase B8
Chr1_-_25238216 3.11 AT1G67360.2
Rubber elongation factor protein (REF)
Chr1_-_25238036 3.11 AT1G67360.1
Rubber elongation factor protein (REF)
Chr1_+_21207537 3.09 AT1G56600.1
galactinol synthase 2
Chr2_+_12871984 3.07 AT2G30140.1
AT2G30140.2
UDP-Glycosyltransferase superfamily protein
Chr3_-_23150606 3.07 AT3G62590.1
alpha/beta-Hydrolases superfamily protein
Chr1_-_659980 3.05 AT1G02920.1
glutathione S-transferase 7
Chr5_-_763322 3.04 AT5G03210.1
E3 ubiquitin-protein ligase
Chr3_+_10520443 3.04 AT3G28210.1
AT3G28210.2
zinc finger (AN1-like) family protein
Chr1_-_7553975 2.98 AT1G21550.1
Calcium-binding EF-hand family protein
Chr3_-_1660380 2.98 AT3G05675.3
AT3G05675.2
AT3G05675.1
BTB/POZ domain-containing protein
Chr1_-_3323735 2.94 AT1G10140.1
Uncharacterized conserved protein UCP031279
Chr3_-_18294621 2.93 AT3G49340.1
Cysteine proteinases superfamily protein
Chr4_+_7148124 2.89 AT4G11890.3
AT4G11890.1
AT4G11890.4
Protein kinase superfamily protein
Chr4_+_17440177 2.84 AT4G36990.1
heat shock factor 4
Chr5_+_25616625 2.83 AT5G64000.2
AT5G64000.1
Inositol monophosphatase family protein
Chr3_-_1776840 2.80 AT3G05937.1
hypothetical protein
Chr3_+_21380648 2.78 AT3G57680.1
AT3G57680.2
Peptidase S41 family protein
Chr5_+_21984569 2.75 AT5G54165.1
Avr9/Cf-9 rapidly elicited protein
Chr1_-_23460884 2.74 AT1G63245.1
CLAVATA3/ESR-RELATED 14
Chr3_-_6788424 2.70 AT3G19550.1
glutamate racemase
Chr1_-_24874758 2.69 AT1G66700.1
AT1G66700.3
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_18465318 2.68 AT3G49780.1
phytosulfokine 4 precursor
Chr5_-_552827 2.67 AT5G02490.1
Heat shock protein 70 (Hsp 70) family protein
Chr1_-_27837443 2.67 AT1G74020.1
strictosidine synthase 2
Chr1_+_28740540 2.65 AT1G76590.1
PLATZ transcription factor family protein
Chr5_-_763480 2.63 AT5G03210.2
E3 ubiquitin-protein ligase
Chr2_+_12767585 2.62 AT2G29950.1
ELF4-like 1
Chr2_-_8850111 2.60 AT2G20560.1
DNAJ heat shock family protein
Chr4_-_6679508 2.58 AT4G10860.1
hypothetical protein
Chr3_-_10898841 2.55 AT3G28890.1
AT3G28890.2
receptor like protein 43
Chr5_+_23928954 2.55 AT5G59320.1
lipid transfer protein 3
Chr4_+_17579618 2.51 AT4G37390.1
Auxin-responsive GH3 family protein
Chr4_-_8870801 2.50 AT4G15530.7
AT4G15530.6
AT4G15530.5
AT4G15530.3
AT4G15530.4
AT4G15530.1
pyruvate orthophosphate dikinase
Chr2_-_13549571 2.49 AT2G31865.3
AT2G31865.1
AT2G31865.2
poly(ADP-ribose) glycohydrolase 2
Chr5_-_25608987 2.48 AT5G63970.2
Copine (Calcium-dependent phospholipid-binding protein) family
Chr2_+_16460247 2.46 AT2G39420.1
alpha/beta-Hydrolases superfamily protein
Chr2_-_8091736 2.46 AT2G18660.1
plant natriuretic peptide A
Chr3_+_4914789 2.46 AT3G14620.1
cytochrome P450, family 72, subfamily A, polypeptide 8
Chr1_+_11945250 2.45 AT1G32960.1
Subtilase family protein
Chr4_-_12416691 2.42 AT4G23880.1
hypothetical protein
Chr2_-_7910040 2.42 AT2G18170.1
MAP kinase 7
Chr3_+_1635194 2.41 AT3G05630.1
phospholipase D P2
Chr3_+_8575051 2.40 AT3G23790.1
AMP-dependent synthetase and ligase family protein
Chr5_-_25609306 2.40 AT5G63970.1
Copine (Calcium-dependent phospholipid-binding protein) family
Chr3_+_21381599 2.37 AT3G57680.3
Peptidase S41 family protein
Chr5_+_21853348 2.37 AT5G53820.1
Late embryogenesis abundant protein (LEA) family protein
Chr3_-_8119490 2.36 AT3G22910.1
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr3_-_4654046 2.36 AT3G14050.1
RELA/SPOT homolog 2
Chr2_-_18306395 2.36 AT2G44290.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_19136019 2.36 AT2G46600.1
Calcium-binding EF-hand family protein
Chr1_-_28991385 2.35 AT1G77145.2
AT1G77145.1
transmembrane protein, putative (DUF506)
Chr2_-_13929763 2.35 AT2G32830.1
phosphate transporter 1;5
Chr4_-_11585391 2.32 AT4G21830.2
methionine sulfoxide reductase B7
Chr4_-_13304440 2.30 AT4G26270.1
phosphofructokinase 3
Chr5_+_25550937 2.30 AT5G63850.1
amino acid permease 4
Chr1_-_29914967 2.30 AT1G79520.1
AT1G79520.4
AT1G79520.3
Cation efflux family protein
Chr5_+_20891163 2.29 AT5G51440.1
HSP20-like chaperones superfamily protein
Chr5_+_7718118 2.28 AT5G23020.1
2-isopropylmalate synthase 2
Chr4_+_994726 2.27 AT4G02280.1
sucrose synthase 3
Chr3_-_21834514 2.26 AT3G59070.1
Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein
Chr4_-_8869319 2.25 AT4G15530.2
pyruvate orthophosphate dikinase
Chr3_-_19643276 2.24 AT3G52970.1
AT3G52970.2
cytochrome P450, family 76, subfamily G, polypeptide 1
Chr4_-_10236041 2.24 AT4G18580.2
AT4G18580.1
hypothetical protein
Chr1_-_19261755 2.24 AT1G51860.2
AT1G51860.1
Leucine-rich repeat protein kinase family protein
Chr5_+_7116687 2.23 AT5G20960.2
aldehyde oxidase 1
Chr3_+_512220 2.22 AT3G02480.1
Late embryogenesis abundant protein (LEA) family protein
Chr5_+_7116455 2.21 AT5G20960.1
aldehyde oxidase 1
Chr3_-_17475274 2.21 AT3G47420.3
AT3G47420.1
AT3G47420.2
putative glycerol-3-phosphate transporter 1
Chr4_-_11585542 2.20 AT4G21830.1
methionine sulfoxide reductase B7
Chr1_+_9483157 2.20 AT1G27300.1
transmembrane protein
Chr3_+_5705541 2.19 AT3G16770.1
ethylene-responsive element binding protein
Chr2_-_13862614 2.18 AT2G32680.1
receptor like protein 23
Chr5_+_21352557 2.15 AT5G52640.1
heat shock-like protein
Chr1_-_10139228 2.15 AT1G29050.1
TRICHOME BIREFRINGENCE-LIKE 38
Chr3_-_9632009 2.14 AT3G26280.1
AT3G26280.2
cytochrome P450, family 71, subfamily B, polypeptide 4
Chr1_-_29914615 2.14 AT1G79520.2
Cation efflux family protein
Chr5_+_21534473 2.13 AT5G53120.6
AT5G53120.1
AT5G53120.2
spermidine synthase 3
Chr2_+_11247160 2.12 AT2G26440.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_13216586 2.12 AT4G26060.1
Ribosomal protein L18ae family
Chr3_+_2753307 2.12 AT3G09020.1
alpha 1,4-glycosyltransferase family protein
Chr1_+_29887616 2.11 AT1G79450.1
AT1G79450.2
ALA-interacting subunit 5
Chr4_+_9385119 2.11 AT4G16670.2
AT4G16670.3
AT4G16670.1
auxin canalization protein (DUF828)
Chr2_-_19412328 2.08 AT2G47270.1
transcription factor UPBEAT protein
Chr5_-_2961382 2.06 AT5G09530.1
hydroxyproline-rich glycoprotein family protein
Chr2_-_18463533 2.05 AT2G44790.1
uclacyanin 2
Chr3_-_6676520 2.04 AT3G19270.1
AT3G19270.2
cytochrome P450, family 707, subfamily A, polypeptide 4
Chr4_+_17955110 2.03 AT4G38340.2
Plant regulator RWP-RK family protein
Chr4_+_7147865 2.03 AT4G11890.2
Protein kinase superfamily protein
Chr4_+_12741032 2.02 AT4G24690.1
ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
Chr5_+_21534766 2.00 AT5G53120.7
AT5G53120.3
spermidine synthase 3
Chr3_+_2641012 1.99 AT3G08690.1
AT3G08690.2
ubiquitin-conjugating enzyme 11
Chr5_-_24083528 1.99 AT5G59780.2
AT5G59780.1
AT5G59780.3
myb domain protein 59
Chr2_+_13014530 1.99 AT2G30550.2
alpha/beta-Hydrolases superfamily protein
Chr4_-_13709170 1.99 AT4G27410.2
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr2_+_13014859 1.98 AT2G30550.1
alpha/beta-Hydrolases superfamily protein
Chr1_-_7089606 1.98 AT1G20450.1
AT1G20450.2
Dehydrin family protein
Chr3_+_20943638 1.98 AT3G56500.1
serine-rich protein-like protein
Chr3_+_22716238 1.97 AT3G61390.1
AT3G61390.2
AT3G61390.3
AT3G61390.4
AT3G61390.5
RING/U-box superfamily protein
Chr3_-_22915393 1.97 AT3G61890.1
homeobox 12
Chr3_+_19723350 1.97 AT3G53230.1
ATPase, AAA-type, CDC48 protein
Chr5_+_26864846 1.96 AT5G67340.2
ARM repeat superfamily protein
Chr5_-_22186633 1.95 AT5G54610.1
ankyrin
Chr5_+_23346876 1.94 AT5G57655.1
xylose isomerase family protein
Chr5_-_8101330 1.94 AT5G23980.1
ferric reduction oxidase 4
Chr4_-_17875201 1.94 AT4G38060.1
AT4G38060.3
AT4G38060.4
hypothetical protein
Chr4_+_17954710 1.94 AT4G38340.1
Plant regulator RWP-RK family protein
Chr5_+_23346675 1.93 AT5G57655.2
xylose isomerase family protein
Chr1_+_18218341 1.92 AT1G49245.1
Prefoldin chaperone subunit family protein
Chr1_-_27707518 1.91 AT1G73680.2
AT1G73680.1
alpha dioxygenase
Chr1_-_26481630 1.90 AT1G70300.1
K+ uptake permease 6
Chr4_-_13709013 1.90 AT4G27410.3
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr1_-_29459493 1.89 AT1G78290.2
AT1G78290.3
Protein kinase superfamily protein
Chr4_-_16388719 1.89 AT4G34230.2
cinnamyl alcohol dehydrogenase 5
Chr5_+_1602205 1.89 AT5G05410.2
AT5G05410.1
DRE-binding protein 2A
Chr4_-_13708861 1.88 AT4G27410.1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr5_+_26864395 1.87 AT5G67340.1
ARM repeat superfamily protein
Chr3_-_16926883 1.87 AT3G46090.1
C2H2 and C2HC zinc fingers superfamily protein
Chr4_-_16388940 1.86 AT4G34230.1
cinnamyl alcohol dehydrogenase 5
Chr5_+_25692425 1.84 AT5G64230.1
1,8-cineole synthase
Chr1_+_12584345 1.83 AT1G34420.1
leucine-rich repeat transmembrane protein kinase family protein
Chr4_+_16136749 1.82 AT4G33565.1
RING/U-box superfamily protein
Chr1_-_29465249 1.82 AT1G78310.1
VQ motif-containing protein
Chr5_+_21535260 1.82 AT5G53120.5
spermidine synthase 3
Chr1_-_28577700 1.82 AT1G76150.1
enoyl-CoA hydratase 2
Chr4_+_15230008 1.81 AT4G31380.1
flowering-promoting factor-like protein
Chr3_+_3967058 1.81 AT3G12510.1
MADS-box family protein
Chr2_+_15831854 1.81 AT2G37760.3
AT2G37760.4
AT2G37760.5
NAD(P)-linked oxidoreductase superfamily protein
Chr1_-_11719988 1.80 AT1G32450.1
nitrate transporter 1.5
Chr1_-_27707213 1.80 AT1G73680.3
alpha dioxygenase
Chr5_-_19607147 1.80 AT5G48380.1
BAK1-interacting receptor-like kinase 1
Chr1_+_20912116 1.80 AT1G55920.1
serine acetyltransferase 2;1
Chr5_+_21535059 1.79 AT5G53120.4
spermidine synthase 3
Chr3_+_8918679 1.78 AT3G24500.2
multiprotein bridging factor 1C
Chr2_+_12023940 1.77 AT2G28200.1
C2H2-type zinc finger family protein
Chr2_+_15831656 1.77 AT2G37760.1
AT2G37760.2
AT2G37760.6
NAD(P)-linked oxidoreductase superfamily protein
Chr1_+_8117732 1.77 AT1G22930.2
T-complex protein 11
Chr5_-_21291928 1.77 AT5G52450.1
MATE efflux family protein
Chr5_+_2854857 1.77 AT5G08760.1
transmembrane protein
Chr3_+_8321329 1.77 AT3G23280.1
AT3G23280.2
hypothetical protein
Chr2_-_13657369 1.77 AT2G32140.1
transmembrane receptor
Chr1_+_8117286 1.77 AT1G22930.1
T-complex protein 11
Chr1_+_4822439 1.76 AT1G14080.1
fucosyltransferase 6
Chr4_-_13222376 1.76 AT4G26080.1
Protein phosphatase 2C family protein
Chr1_-_27706617 1.76 AT1G73680.4
alpha dioxygenase
Chr3_+_8918267 1.75 AT3G24500.1
multiprotein bridging factor 1C
Chr1_-_20784017 1.75 AT1G55610.2
AT1G55610.1
BRI1 like
Chr4_+_5448049 1.73 AT4G08555.1
hypothetical protein
Chr4_+_11475709 1.72 AT4G21580.1
AT4G21580.3
AT4G21580.2
oxidoreductase, zinc-binding dehydrogenase family protein
Chr5_-_1217362 1.72 AT5G04340.1
6
Chr1_+_17643976 1.72 AT1G47890.1
receptor like protein 7
Chr2_+_837801 1.71 AT2G02870.3
AT2G02870.1
AT2G02870.2
Galactose oxidase/kelch repeat superfamily protein
Chr5_+_19135952 1.71 AT5G47120.1
BAX inhibitor 1
Chr5_+_1444638 1.71 AT5G04930.1
aminophospholipid ATPase 1
Chr4_+_11172622 1.71 AT4G20860.1
FAD-binding Berberine family protein
Chr5_-_23501416 1.70 AT5G58070.1
temperature-induced lipocalin
Chr2_-_12515947 1.70 AT2G29120.1
glutamate receptor 2.7
Chr5_+_16579936 1.67 AT5G41410.1
POX (plant homeobox) family protein
Chr2_+_17177539 1.67 AT2G41220.1
glutamate synthase 2
Chr1_-_37757 1.66 AT1G01060.3
AT1G01060.2
AT1G01060.4
AT1G01060.1
AT1G01060.6
AT1G01060.7
AT1G01060.5
Homeodomain-like superfamily protein
Chr3_-_17976774 1.65 AT3G48520.1
cytochrome P450, family 94, subfamily B, polypeptide 3
Chr5_-_22822904 1.64 AT5G56350.1
Pyruvate kinase family protein
Chr5_-_270646 1.64 AT5G01720.1
RNI-like superfamily protein
Chr1_+_99865 1.64 AT1G01240.4
AT1G01240.2
AT1G01240.1
AT1G01240.3
AT1G01240.5
transmembrane protein
Chr3_+_20496081 1.63 AT3G55270.1
mitogen-activated protein kinase phosphatase 1
Chr1_-_27749248 1.63 AT1G73805.1
Calmodulin binding protein-like protein
Chr5_-_18679191 1.63 AT5G46050.1
peptide transporter 3
Chr1_-_23669125 1.62 AT1G63800.1
AT1G63800.2
ubiquitin-conjugating enzyme 5
Chr3_+_8295617 1.62 AT3G23240.1
ethylene response factor 1
Chr1_+_7496998 1.62 AT1G21410.1
AT1G21410.2
F-box/RNI-like superfamily protein
Chr2_-_12796085 1.61 AT2G29990.1
alternative NAD(P)H dehydrogenase 2
Chr1_-_26117955 1.60 AT1G69480.1
EXS (ERD1/XPR1/SYG1) family protein
Chr3_+_7870826 1.60 AT3G22260.4
AT3G22260.2
AT3G22260.1
AT3G22260.3
AT3G22260.5
Cysteine proteinases superfamily protein
Chr4_-_10786423 1.60 AT4G19880.2
AT4G19880.3
AT4G19880.1
Glutathione S-transferase family protein
Chr5_-_7305870 1.59 AT5G22060.1
DNAJ homologue 2
Chr2_-_9991526 1.58 AT2G23450.1
Protein kinase superfamily protein
Chr5_+_864261 1.58 AT5G03460.1
transmembrane protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G24520

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 4.5 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
1.1 7.7 GO:0006597 spermine biosynthetic process(GO:0006597)
1.0 16.6 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
1.0 3.0 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.9 3.6 GO:0033306 phytol metabolic process(GO:0033306)
0.9 1.7 GO:0030320 cellular monovalent inorganic anion homeostasis(GO:0030320)
0.8 2.5 GO:0009211 pyrimidine deoxyribonucleoside triphosphate metabolic process(GO:0009211) pyrimidine deoxyribonucleotide metabolic process(GO:0009219) pyrimidine deoxyribonucleotide biosynthetic process(GO:0009221) 2'-deoxyribonucleotide biosynthetic process(GO:0009265) deoxyribose phosphate biosynthetic process(GO:0046385)
0.8 3.9 GO:0019323 pentose catabolic process(GO:0019323)
0.8 3.1 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.8 3.8 GO:0060151 peroxisome localization(GO:0060151)
0.7 2.2 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.7 4.2 GO:0042981 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.7 0.7 GO:0075733 intracellular transport of virus(GO:0075733)
0.7 6.2 GO:0010230 alternative respiration(GO:0010230)
0.7 0.7 GO:0009745 sucrose mediated signaling(GO:0009745)
0.6 2.6 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.6 4.4 GO:0090059 protoxylem development(GO:0090059)
0.6 1.2 GO:0006000 fructose metabolic process(GO:0006000)
0.6 1.8 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.5 1.6 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.5 2.1 GO:1902916 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.5 2.0 GO:0035865 cellular response to potassium ion(GO:0035865)
0.5 1.5 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.5 1.4 GO:0015802 basic amino acid transport(GO:0015802)
0.5 1.4 GO:0046705 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.5 3.8 GO:0033523 histone H2B ubiquitination(GO:0033523)
0.5 1.4 GO:0042908 xenobiotic transport(GO:0042908)
0.5 3.3 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.5 1.9 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.5 0.9 GO:0002240 response to molecule of oomycetes origin(GO:0002240)
0.5 1.4 GO:0010045 response to nickel cation(GO:0010045)
0.5 1.4 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.5 1.4 GO:0034247 snoRNA splicing(GO:0034247)
0.4 1.8 GO:0048480 stigma development(GO:0048480)
0.4 1.3 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.4 1.7 GO:0045332 phospholipid translocation(GO:0045332)
0.4 1.7 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.4 2.1 GO:0015824 proline transport(GO:0015824)
0.4 2.0 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.4 1.6 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.4 2.4 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.4 2.4 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.4 1.2 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.4 5.5 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.4 1.5 GO:0006182 cGMP biosynthetic process(GO:0006182) cyclic nucleotide biosynthetic process(GO:0009190) cGMP metabolic process(GO:0046068) cyclic purine nucleotide metabolic process(GO:0052652)
0.4 1.1 GO:0050685 positive regulation of RNA splicing(GO:0033120) positive regulation of mRNA processing(GO:0050685)
0.4 1.1 GO:0000050 urea cycle(GO:0000050)
0.4 1.4 GO:0036123 histone H3-K9 dimethylation(GO:0036123) regulation of histone H3-K9 dimethylation(GO:1900109)
0.3 1.4 GO:1901654 response to ketone(GO:1901654)
0.3 1.4 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.3 1.4 GO:0010353 response to trehalose(GO:0010353)
0.3 3.7 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.3 2.4 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.3 3.6 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.3 2.6 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.3 1.6 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.3 0.3 GO:0006498 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.3 1.6 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.3 0.9 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.3 5.9 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.3 1.6 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.3 0.9 GO:0010184 cytokinin transport(GO:0010184)
0.3 0.9 GO:0070536 protein K63-linked deubiquitination(GO:0070536)
0.3 1.5 GO:0043279 response to caffeine(GO:0031000) response to alkaloid(GO:0043279)
0.3 7.8 GO:0030091 protein repair(GO:0030091)
0.3 2.3 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.3 1.7 GO:0048530 fruit morphogenesis(GO:0048530)
0.3 0.8 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.3 11.5 GO:0006986 response to unfolded protein(GO:0006986)
0.3 1.1 GO:0090065 regulation of production of siRNA involved in RNA interference(GO:0090065)
0.3 1.1 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.3 0.8 GO:0019320 hexose catabolic process(GO:0019320)
0.3 4.0 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.3 3.4 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.3 1.8 GO:0019632 shikimate metabolic process(GO:0019632)
0.2 1.2 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.2 1.9 GO:0060866 leaf abscission(GO:0060866)
0.2 5.4 GO:0009395 phospholipid catabolic process(GO:0009395)
0.2 1.6 GO:0051014 actin filament severing(GO:0051014)
0.2 1.2 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.2 4.4 GO:0071545 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.2 1.4 GO:0043102 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.2 4.1 GO:0000165 MAPK cascade(GO:0000165)
0.2 3.0 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.2 2.2 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.2 2.7 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.2 0.6 GO:0010507 negative regulation of autophagy(GO:0010507)
0.2 1.5 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.2 0.6 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.2 0.9 GO:0009660 amyloplast organization(GO:0009660)
0.2 6.6 GO:0006012 galactose metabolic process(GO:0006012)
0.2 4.1 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.2 2.7 GO:0030104 water homeostasis(GO:0030104)
0.2 2.2 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.2 1.2 GO:1990019 protein storage vacuole organization(GO:1990019)
0.2 0.6 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.2 1.0 GO:0080009 mRNA methylation(GO:0080009)
0.2 0.6 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.2 2.0 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221) immune response-activating signal transduction(GO:0002757) innate immune response-activating signal transduction(GO:0002758)
0.2 0.8 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.2 0.6 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.2 0.2 GO:0006998 nuclear envelope organization(GO:0006998)
0.2 0.6 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.2 0.6 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.2 3.5 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.2 0.6 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.2 2.5 GO:0080036 regulation of cytokinin-activated signaling pathway(GO:0080036)
0.2 0.6 GO:0010198 synergid death(GO:0010198)
0.2 0.7 GO:0070272 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
0.2 0.5 GO:0042353 fucose biosynthetic process(GO:0042353)
0.2 0.7 GO:0040031 snRNA modification(GO:0040031)
0.2 0.7 GO:0016598 protein arginylation(GO:0016598)
0.2 1.9 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.2 1.2 GO:0006552 leucine catabolic process(GO:0006552)
0.2 1.4 GO:0009061 anaerobic respiration(GO:0009061)
0.2 3.1 GO:0009649 entrainment of circadian clock(GO:0009649)
0.2 0.8 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.2 1.2 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.2 1.5 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.2 2.3 GO:0010555 response to mannitol(GO:0010555)
0.2 2.5 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.2 0.7 GO:0034389 lipid particle organization(GO:0034389)
0.2 1.5 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.2 1.3 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.2 1.6 GO:0043462 regulation of ATPase activity(GO:0043462)
0.2 0.8 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.2 0.5 GO:0051601 exocyst localization(GO:0051601)
0.2 3.4 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.2 1.4 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.2 3.0 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.2 1.7 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.2 2.4 GO:1990069 stomatal opening(GO:1990069)
0.2 1.7 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.2 1.4 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.6 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 31.3 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 0.7 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.4 GO:0090435 protein localization to nuclear envelope(GO:0090435)
0.1 0.9 GO:0048446 petal morphogenesis(GO:0048446)
0.1 0.7 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 1.5 GO:0043171 peptide catabolic process(GO:0043171)
0.1 0.6 GO:0071494 cellular response to UV-C(GO:0071494)
0.1 0.4 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.1 0.7 GO:0060919 auxin influx(GO:0060919)
0.1 1.4 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 6.1 GO:0002239 response to oomycetes(GO:0002239)
0.1 0.7 GO:0051098 regulation of binding(GO:0051098)
0.1 1.4 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.1 2.6 GO:0009615 response to virus(GO:0009615)
0.1 1.4 GO:0035437 maintenance of protein localization in endoplasmic reticulum(GO:0035437) cytoplasmic sequestering of protein(GO:0051220)
0.1 1.4 GO:0009610 response to symbiotic fungus(GO:0009610)
0.1 1.3 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 2.2 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.1 0.6 GO:0071277 cellular response to calcium ion(GO:0071277)
0.1 3.6 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 2.1 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 0.6 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.4 GO:0071481 cellular response to X-ray(GO:0071481)
0.1 0.9 GO:0097034 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 0.9 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.1 2.7 GO:0001666 response to hypoxia(GO:0001666)
0.1 0.3 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.1 0.3 GO:0010508 positive regulation of autophagy(GO:0010508)
0.1 1.7 GO:0006465 signal peptide processing(GO:0006465)
0.1 0.3 GO:0071265 L-methionine biosynthetic process(GO:0071265)
0.1 0.9 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 0.3 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.1 2.3 GO:0006282 regulation of DNA repair(GO:0006282)
0.1 1.3 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 1.3 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.6 GO:0006513 protein monoubiquitination(GO:0006513)
0.1 0.5 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 0.7 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.1 2.4 GO:0060548 negative regulation of cell death(GO:0060548)
0.1 2.1 GO:0009901 anther dehiscence(GO:0009901)
0.1 2.3 GO:0030433 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.1 0.6 GO:0006567 threonine catabolic process(GO:0006567)
0.1 0.6 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 2.2 GO:0045493 xylan catabolic process(GO:0045493)
0.1 1.3 GO:0015693 magnesium ion transport(GO:0015693)
0.1 0.7 GO:0090548 response to nitrate starvation(GO:0090548)
0.1 1.0 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.1 0.2 GO:1903580 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.1 1.1 GO:0045116 protein neddylation(GO:0045116)
0.1 2.1 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.1 1.4 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.3 GO:0072388 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.1 1.8 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.1 1.4 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 2.0 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 1.2 GO:0045995 regulation of embryonic development(GO:0045995) seed morphogenesis(GO:0048317)
0.1 0.6 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.1 0.8 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.1 2.5 GO:0010252 auxin homeostasis(GO:0010252)
0.1 1.6 GO:0046688 response to copper ion(GO:0046688)
0.1 0.5 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.1 0.6 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
0.1 0.8 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.1 0.2 GO:1901336 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 0.4 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.8 GO:0006672 ceramide metabolic process(GO:0006672)
0.1 8.8 GO:0009867 jasmonic acid mediated signaling pathway(GO:0009867)
0.1 1.0 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.1 1.6 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.1 2.2 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.1 0.9 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.9 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 1.4 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.1 0.6 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.1 1.4 GO:1905037 autophagosome assembly(GO:0000045) autophagosome organization(GO:1905037)
0.1 2.6 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.1 0.8 GO:0036065 fucosylation(GO:0036065)
0.1 5.8 GO:0016579 protein deubiquitination(GO:0016579)
0.1 0.4 GO:0019419 sulfate reduction(GO:0019419)
0.1 2.4 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.1 1.3 GO:0031348 negative regulation of defense response(GO:0031348)
0.1 0.1 GO:0090355 positive regulation of auxin metabolic process(GO:0090355)
0.1 3.5 GO:0051607 defense response to virus(GO:0051607)
0.1 5.5 GO:0000209 protein polyubiquitination(GO:0000209)
0.1 0.3 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 0.5 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.1 0.2 GO:1901421 positive regulation of response to alcohol(GO:1901421)
0.1 0.8 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.1 1.0 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.1 3.1 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.1 1.8 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.1 2.2 GO:0016575 histone deacetylation(GO:0016575)
0.1 3.8 GO:0034605 cellular response to heat(GO:0034605)
0.1 0.3 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 2.2 GO:0010286 heat acclimation(GO:0010286)
0.1 3.6 GO:0000380 alternative mRNA splicing, via spliceosome(GO:0000380)
0.1 1.7 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.1 1.0 GO:0043248 proteasome assembly(GO:0043248)
0.1 0.3 GO:1990428 miRNA transport(GO:1990428)
0.1 2.1 GO:2000028 regulation of photoperiodism, flowering(GO:2000028)
0.1 1.5 GO:0034243 regulation of transcription elongation from RNA polymerase II promoter(GO:0034243)
0.1 4.3 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.1 0.4 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.1 0.7 GO:1990937 xylan acetylation(GO:1990937)
0.1 0.9 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 0.3 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 0.8 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.1 0.4 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 0.7 GO:0070646 protein modification by small protein removal(GO:0070646)
0.1 0.2 GO:0015739 sialic acid transport(GO:0015739)
0.1 4.1 GO:0009561 megagametogenesis(GO:0009561)
0.1 0.5 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.1 0.8 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.1 0.2 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 5.0 GO:0009408 response to heat(GO:0009408)
0.1 0.6 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.3 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.8 GO:0018401 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.1 0.2 GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic(GO:0000291) nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'(GO:0034427) U4 snRNA 3'-end processing(GO:0034475) nuclear mRNA surveillance(GO:0071028)
0.1 0.6 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.1 0.8 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 1.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 0.1 GO:1901562 response to paraquat(GO:1901562)
0.1 0.9 GO:0009682 induced systemic resistance(GO:0009682)
0.1 0.7 GO:0032365 intracellular lipid transport(GO:0032365)
0.0 0.0 GO:2000114 regulation of establishment or maintenance of cell polarity(GO:0032878) regulation of establishment of cell polarity(GO:2000114)
0.0 0.1 GO:2000769 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.0 1.6 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 2.0 GO:0006475 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.4 GO:1902074 response to salt(GO:1902074)
0.0 0.5 GO:0046417 chorismate metabolic process(GO:0046417)
0.0 0.2 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.4 GO:0009435 NAD biosynthetic process(GO:0009435)
0.0 0.0 GO:0006004 fucose metabolic process(GO:0006004)
0.0 0.1 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.0 1.1 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.1 GO:0009584 detection of visible light(GO:0009584)
0.0 1.0 GO:0043067 regulation of programmed cell death(GO:0043067)
0.0 0.3 GO:0008216 spermidine metabolic process(GO:0008216)
0.0 0.7 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 1.3 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.1 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.0 0.4 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.8 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.4 GO:0006997 nucleus organization(GO:0006997)
0.0 0.6 GO:0015770 sucrose transport(GO:0015770)
0.0 0.2 GO:0015846 polyamine transport(GO:0015846)
0.0 1.9 GO:0009631 cold acclimation(GO:0009631)
0.0 0.6 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.0 0.2 GO:0097502 mannosylation(GO:0097502)
0.0 0.5 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.0 0.4 GO:0007004 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.0 0.9 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.2 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.0 0.6 GO:0007030 Golgi organization(GO:0007030)
0.0 0.2 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 0.9 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 2.4 GO:0009751 response to salicylic acid(GO:0009751)
0.0 0.2 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.0 0.7 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.2 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.0 0.3 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.6 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.9 GO:0044744 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.0 0.4 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 1.4 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 0.4 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.3 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 0.4 GO:0015706 nitrate transport(GO:0015706)
0.0 0.5 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.1 GO:0019310 inositol catabolic process(GO:0019310)
0.0 1.1 GO:0006897 endocytosis(GO:0006897)
0.0 2.4 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 0.2 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.4 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.5 GO:0001522 pseudouridine synthesis(GO:0001522)
0.0 4.9 GO:0030163 protein catabolic process(GO:0030163)
0.0 0.3 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.0 0.1 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.4 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.7 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.8 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.1 GO:0097576 vacuole fusion(GO:0097576)
0.0 2.2 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 2.0 GO:0006486 protein glycosylation(GO:0006486) macromolecule glycosylation(GO:0043413)
0.0 0.0 GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000466)
0.0 0.4 GO:0009626 plant-type hypersensitive response(GO:0009626) host programmed cell death induced by symbiont(GO:0034050)
0.0 0.1 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.1 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.1 GO:0032351 negative regulation of hormone metabolic process(GO:0032351)
0.0 0.3 GO:0016485 protein processing(GO:0016485)
0.0 0.4 GO:0042330 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.0 GO:0051645 Golgi localization(GO:0051645)
0.0 0.4 GO:0009251 glucan catabolic process(GO:0009251)
0.0 0.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.9 GO:0006869 lipid transport(GO:0006869)
0.0 0.3 GO:0010091 trichome branching(GO:0010091)
0.0 0.1 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 2.3 GO:0016192 vesicle-mediated transport(GO:0016192)
0.0 0.1 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.7 GO:0009624 response to nematode(GO:0009624)
0.0 0.1 GO:0042276 error-prone translesion synthesis(GO:0042276)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.2 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.8 4.8 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.6 2.4 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.4 3.7 GO:0000813 ESCRT I complex(GO:0000813)
0.3 2.2 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.3 2.2 GO:0016363 nuclear matrix(GO:0016363)
0.3 2.5 GO:0035619 root hair tip(GO:0035619)
0.3 2.1 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.3 2.7 GO:0010168 ER body(GO:0010168)
0.3 3.3 GO:0030131 clathrin adaptor complex(GO:0030131)
0.2 2.5 GO:0016272 prefoldin complex(GO:0016272)
0.2 1.4 GO:0005776 autophagosome(GO:0005776)
0.2 1.4 GO:0070552 BRISC complex(GO:0070552)
0.2 2.5 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.2 2.5 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.2 0.4 GO:0005685 U1 snRNP(GO:0005685)
0.2 4.4 GO:0009986 cell surface(GO:0009986)
0.2 2.1 GO:0030014 CCR4-NOT complex(GO:0030014)
0.2 4.1 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.2 2.0 GO:0030125 clathrin vesicle coat(GO:0030125)
0.2 1.2 GO:0071818 BAT3 complex(GO:0071818)
0.2 1.7 GO:0017119 Golgi transport complex(GO:0017119)
0.2 1.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.2 0.5 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.2 6.0 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.2 1.4 GO:0005784 Sec61 translocon complex(GO:0005784)
0.2 1.8 GO:0035861 site of double-strand break(GO:0035861)
0.2 1.2 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.2 2.4 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.2 1.2 GO:0005884 actin filament(GO:0005884)
0.2 1.2 GO:0005787 signal peptidase complex(GO:0005787)
0.2 0.6 GO:0031932 TORC2 complex(GO:0031932)
0.2 0.8 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.6 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.1 1.0 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 0.7 GO:0030141 secretory granule(GO:0030141)
0.1 0.4 GO:0044665 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.1 2.1 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.1 1.1 GO:0070390 transcription export complex 2(GO:0070390)
0.1 0.7 GO:0005845 mRNA cap binding complex(GO:0005845)
0.1 0.7 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1 0.6 GO:0000938 GARP complex(GO:0000938)
0.1 0.7 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 1.6 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.1 1.2 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.1 0.5 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.1 0.5 GO:0090397 stigma papilla(GO:0090397)
0.1 1.0 GO:0005675 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 0.4 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.1 0.7 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 2.2 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.1 7.0 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 0.6 GO:0035145 exon-exon junction complex(GO:0035145)
0.1 8.5 GO:0005635 nuclear envelope(GO:0005635)
0.1 1.3 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.1 0.5 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.1 0.4 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.6 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 1.1 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 1.9 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.6 GO:0030897 HOPS complex(GO:0030897)
0.1 0.8 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 1.3 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.1 0.3 GO:0032044 DSIF complex(GO:0032044)
0.1 0.3 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.1 3.6 GO:0016592 mediator complex(GO:0016592)
0.1 2.6 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.1 0.4 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 1.2 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.1 0.4 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 0.6 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.1 0.8 GO:0030904 retromer complex(GO:0030904)
0.1 0.9 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.1 1.6 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 3.9 GO:0000139 Golgi membrane(GO:0000139)
0.1 8.0 GO:0043657 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.1 0.7 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.1 1.1 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 1.4 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.1 2.1 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 0.6 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 0.4 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 0.9 GO:0005682 U5 snRNP(GO:0005682)
0.1 1.1 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 1.1 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 1.1 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.9 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 0.3 GO:0089701 U2AF(GO:0089701)
0.1 3.5 GO:0016607 nuclear speck(GO:0016607)
0.1 1.4 GO:0000145 exocyst(GO:0000145)
0.1 1.9 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.1 0.4 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 1.2 GO:0000118 histone deacetylase complex(GO:0000118)
0.1 1.1 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 1.8 GO:0000502 proteasome complex(GO:0000502)
0.0 0.5 GO:0008180 COP9 signalosome(GO:0008180)
0.0 4.0 GO:0005681 spliceosomal complex(GO:0005681)
0.0 1.0 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 2.3 GO:0016591 DNA-directed RNA polymerase II, holoenzyme(GO:0016591)
0.0 0.9 GO:0044452 nucleolar part(GO:0044452)
0.0 0.5 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.3 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 2.2 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 1.0 GO:0009504 cell plate(GO:0009504)
0.0 1.1 GO:0005764 lysosome(GO:0005764)
0.0 0.4 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.4 GO:0048475 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.0 0.5 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.3 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.3 GO:0042575 DNA polymerase complex(GO:0042575)
0.0 0.1 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.0 14.4 GO:0005774 vacuolar membrane(GO:0005774)
0.0 4.5 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.0 0.5 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.4 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.4 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.0 0.0 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.1 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 1.6 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 9.1 GO:0005794 Golgi apparatus(GO:0005794)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 7.7 GO:0016768 spermine synthase activity(GO:0016768)
1.5 4.5 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
1.2 4.9 GO:0070401 NADP+ binding(GO:0070401)
1.1 4.5 GO:0030410 nicotianamine synthase activity(GO:0030410)
1.1 4.4 GO:0052596 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.8 4.9 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.8 3.2 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.8 7.9 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.7 3.0 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.7 6.6 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.7 2.8 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.7 4.8 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.7 2.7 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.6 3.9 GO:0009041 uridylate kinase activity(GO:0009041)
0.6 3.6 GO:0030544 Hsp70 protein binding(GO:0030544)
0.6 2.3 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.6 1.8 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.6 4.0 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.6 1.7 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.5 0.5 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.5 3.7 GO:0009916 alternative oxidase activity(GO:0009916)
0.5 1.8 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.4 11.9 GO:0051787 misfolded protein binding(GO:0051787)
0.4 3.0 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.4 1.6 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.4 2.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.4 3.9 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.4 1.1 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.4 1.8 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.4 1.8 GO:0004765 shikimate kinase activity(GO:0004765)
0.4 2.5 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.3 2.1 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.3 1.4 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.3 1.0 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.3 2.7 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.3 0.9 GO:0070678 preprotein binding(GO:0070678)
0.3 3.1 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.3 1.2 GO:0070628 proteasome binding(GO:0070628)
0.3 1.5 GO:0015446 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.3 0.9 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.3 5.2 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.3 4.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.3 1.2 GO:0052743 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.3 2.3 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.3 0.8 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.3 1.1 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.3 1.1 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.3 1.1 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.3 1.3 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.3 2.9 GO:0008199 ferric iron binding(GO:0008199)
0.3 1.5 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.3 0.8 GO:0008517 folic acid transporter activity(GO:0008517)
0.2 1.0 GO:0015368 calcium:cation antiporter activity(GO:0015368)
0.2 0.7 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.2 1.0 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.2 1.2 GO:0035197 siRNA binding(GO:0035197)
0.2 1.7 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.2 1.2 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.2 1.6 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.2 5.8 GO:0031593 polyubiquitin binding(GO:0031593)
0.2 2.1 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.2 12.2 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.2 1.9 GO:0035198 miRNA binding(GO:0035198)
0.2 1.5 GO:0043855 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.2 4.1 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.2 0.4 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.2 2.5 GO:0102391 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.2 0.6 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.2 2.7 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.2 1.4 GO:0008022 protein C-terminus binding(GO:0008022)
0.2 0.8 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.2 1.4 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.2 2.9 GO:0052742 phosphatidylinositol kinase activity(GO:0052742)
0.2 1.5 GO:0004383 guanylate cyclase activity(GO:0004383)
0.2 1.5 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.2 3.8 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.2 2.4 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.2 0.7 GO:0080116 1,4-beta-D-xylan synthase activity(GO:0047517) glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.2 0.5 GO:0004774 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.2 2.2 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.2 0.7 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.2 1.4 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.2 2.7 GO:0004629 phospholipase C activity(GO:0004629)
0.2 0.9 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.2 0.7 GO:0004057 arginyltransferase activity(GO:0004057)
0.2 2.9 GO:0016157 sucrose synthase activity(GO:0016157)
0.2 1.4 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.2 3.9 GO:0030276 clathrin binding(GO:0030276)
0.2 3.6 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.2 3.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.2 1.8 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.2 0.5 GO:0019003 GDP binding(GO:0019003)
0.2 6.3 GO:0032182 ubiquitin-like protein binding(GO:0032182)
0.2 1.8 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.2 0.5 GO:0004106 chorismate mutase activity(GO:0004106)
0.2 0.5 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 0.8 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 0.4 GO:0004359 glutaminase activity(GO:0004359)
0.1 1.5 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.1 0.4 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.1 2.9 GO:0031072 heat shock protein binding(GO:0031072)
0.1 0.4 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 1.9 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.1 1.9 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 4.7 GO:0004707 MAP kinase activity(GO:0004707)
0.1 2.5 GO:0019902 phosphatase binding(GO:0019902)
0.1 0.8 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 1.9 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 0.6 GO:0008732 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.1 2.0 GO:0019905 syntaxin binding(GO:0019905)
0.1 1.9 GO:0035064 methylated histone binding(GO:0035064)
0.1 1.7 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 0.3 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.1 0.3 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.1 0.6 GO:0001727 lipid kinase activity(GO:0001727)
0.1 1.3 GO:0004709 receptor signaling protein serine/threonine kinase activity(GO:0004702) MAP kinase kinase kinase activity(GO:0004709)
0.1 0.4 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.1 1.1 GO:0032452 histone demethylase activity(GO:0032452)
0.1 0.4 GO:0047714 galactolipase activity(GO:0047714)
0.1 1.9 GO:0008536 Ran GTPase binding(GO:0008536)
0.1 2.1 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 0.7 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 6.0 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.1 2.1 GO:0004866 endopeptidase inhibitor activity(GO:0004866) endopeptidase regulator activity(GO:0061135)
0.1 0.3 GO:0005049 nuclear export signal receptor activity(GO:0005049) homogentisate prenyltransferase activity(GO:0010354)
0.1 2.1 GO:0005217 intracellular ligand-gated ion channel activity(GO:0005217)
0.1 0.7 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 1.1 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 1.1 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 2.5 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.1 1.2 GO:0017025 TBP-class protein binding(GO:0017025)
0.1 1.2 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.1 0.5 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.1 1.0 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.1 0.5 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.1 1.4 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 1.2 GO:0016408 C-acyltransferase activity(GO:0016408)
0.1 4.8 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 1.4 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 1.0 GO:0016208 AMP binding(GO:0016208)
0.1 0.4 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.9 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.1 0.8 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.3 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.1 2.4 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 1.9 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.1 0.6 GO:2001070 starch binding(GO:2001070)
0.1 1.2 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 5.7 GO:0051082 unfolded protein binding(GO:0051082)
0.1 0.3 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.1 2.2 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.1 1.3 GO:0015248 sterol transporter activity(GO:0015248)
0.1 2.3 GO:0003684 damaged DNA binding(GO:0003684)
0.1 0.7 GO:0008865 fructokinase activity(GO:0008865)
0.1 0.2 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.1 0.2 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.1 0.3 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.1 0.4 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 0.6 GO:0070300 phosphatidic acid binding(GO:0070300)
0.1 2.4 GO:0003714 transcription corepressor activity(GO:0003714)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 0.2 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.5 GO:0008494 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.1 2.4 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.1 1.5 GO:0008143 poly(A) binding(GO:0008143)
0.1 1.9 GO:0004402 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.1 7.6 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 2.2 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 5.5 GO:0051213 dioxygenase activity(GO:0051213)
0.1 2.5 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.1 0.9 GO:0003725 double-stranded RNA binding(GO:0003725)
0.1 0.3 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.4 GO:0010011 auxin binding(GO:0010011)
0.1 1.9 GO:0017137 Rab GTPase binding(GO:0017137)
0.1 0.8 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.5 GO:0016755 transferase activity, transferring amino-acyl groups(GO:0016755)
0.1 0.8 GO:0019707 palmitoyltransferase activity(GO:0016409) protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 1.3 GO:0016832 aldehyde-lyase activity(GO:0016832)
0.0 16.7 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 0.4 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 3.5 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.5 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 0.6 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 4.6 GO:0005216 ion channel activity(GO:0005216)
0.0 0.7 GO:0017069 snRNA binding(GO:0017069)
0.0 0.2 GO:0070137 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.0 6.6 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.4 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.5 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.5 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.7 GO:0036002 pre-mRNA binding(GO:0036002)
0.0 0.2 GO:0004567 beta-mannosidase activity(GO:0004567)
0.0 0.1 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.0 0.2 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.0 12.1 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 1.0 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 7.9 GO:0005509 calcium ion binding(GO:0005509)
0.0 0.1 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.1 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.0 0.1 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 3.4 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.2 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.0 0.8 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.4 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 1.2 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.7 GO:0031386 protein tag(GO:0031386)
0.0 0.4 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.1 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.0 0.1 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.0 3.1 GO:0003779 actin binding(GO:0003779)
0.0 0.5 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 1.0 GO:0042393 histone binding(GO:0042393)
0.0 0.1 GO:0050113 inositol oxygenase activity(GO:0050113)
0.0 0.1 GO:0004663 protein geranylgeranyltransferase activity(GO:0004661) Rab geranylgeranyltransferase activity(GO:0004663)
0.0 0.2 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.1 GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.0 0.2 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.1 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 2.1 GO:0004721 phosphoprotein phosphatase activity(GO:0004721)
0.0 0.5 GO:0008810 cellulase activity(GO:0008810)
0.0 0.1 GO:0019239 deaminase activity(GO:0019239)
0.0 0.5 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.0 GO:0004560 alpha-L-fucosidase activity(GO:0004560)
0.0 0.0 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.0 0.3 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.6 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.9 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.2 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.1 GO:0016775 protein histidine kinase activity(GO:0004673) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775)
0.0 0.1 GO:0004124 cysteine synthase activity(GO:0004124)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.2 SIG CHEMOTAXIS Genes related to chemotaxis
0.8 2.4 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.3 0.9 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.3 1.5 PID S1P S1P1 PATHWAY S1P1 pathway
0.3 1.5 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.2 1.6 PID RAC1 PATHWAY RAC1 signaling pathway
0.2 1.4 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.6 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.1 0.4 PID INTEGRIN A4B1 PATHWAY Alpha4 beta1 integrin signaling events
0.1 0.6 PID ATF2 PATHWAY ATF-2 transcription factor network
0.1 0.3 PID AVB3 INTEGRIN PATHWAY Integrins in angiogenesis
0.0 0.3 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.1 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
0.4 3.4 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.4 2.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.3 0.8 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.3 1.3 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.2 0.6 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.2 0.5 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 0.4 REACTOME INTEGRIN CELL SURFACE INTERACTIONS Genes involved in Integrin cell surface interactions
0.1 0.8 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.1 0.5 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.1 0.7 REACTOME HOST INTERACTIONS OF HIV FACTORS Genes involved in Host Interactions of HIV factors
0.1 0.3 REACTOME REGULATION OF KIT SIGNALING Genes involved in Regulation of KIT signaling
0.1 0.3 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.6 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.2 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.1 0.9 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.4 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.1 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.0 1.0 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.9 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins