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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G15270

Z-value: 0.80

Transcription factors associated with AT3G15270

Gene Symbol Gene ID Gene Info
AT3G15270
AT3G15270 squamosa promoter binding protein-like 5

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
SPL5arTal_v1_Chr3_-_5142323_5142323-0.356.9e-02Click!

Activity profile of AT3G15270 motif

Sorted Z-values of AT3G15270 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_10255906 4.24 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
Chr2_+_14524607 4.05 AT2G34430.1
LHB1B1
light-harvesting chlorophyll-protein complex II subunit B1
Chr4_-_18098633 3.84 AT4G38770.1
PRP4
proline-rich protein 4
Chr1_-_29635931 3.58 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr4_-_17777445 3.34 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr3_+_17228642 2.99 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr5_-_4392227 2.68 AT5G13630.2
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Chr5_-_4392429 2.68 AT5G13630.1
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Chr3_-_3357754 2.65 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_-_25343369 2.64 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
Chr3_+_1695156 2.64 AT3G05730.1
AT3G05730
defensin-like protein
Chr1_+_10371675 2.62 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_23266227 2.62 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
Chr3_-_19139423 2.57 AT3G51600.1
LTP5
lipid transfer protein 5
Chr4_-_12400231 2.56 AT4G23820.1
AT4G23820
Pectin lyase-like superfamily protein
Chr1_-_27853233 2.51 AT1G74070.2
AT1G74070.1
AT1G74070
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr5_+_5237970 2.49 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
Chr3_-_4744263 2.46 AT3G14240.1
AT3G14240
Subtilase family protein
Chr1_+_19454798 2.39 AT1G52230.1
PSAH2
photosystem I subunit H2
Chr5_+_26767599 2.36 AT5G67070.1
RALFL34
ralf-like 34
Chr5_-_18026077 2.34 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr3_-_16448844 2.31 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr1_+_20614573 2.29 AT1G55260.1
AT1G55260.2
AT1G55260
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_12433796 2.29 AT2G28950.1
EXPA6
expansin A6
Chr1_+_10477885 2.27 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr2_+_8940833 2.27 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr1_-_4530222 2.26 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr1_+_907523 2.26 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
Chr5_+_18634041 2.26 AT5G45950.1
AT5G45950
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_176870 2.24 AT4G00400.1
GPAT8
glycerol-3-phosphate acyltransferase 8
Chr5_+_4087689 2.23 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr5_-_6976036 2.22 AT5G20630.1
GER3
germin 3
Chr1_-_28419635 2.22 AT1G75680.1
GH9B7
glycosyl hydrolase 9B7
Chr3_-_3356811 2.22 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_-_8183570 2.19 AT1G23080.2
AT1G23080.3
AT1G23080.4
AT1G23080.1
PIN7
Auxin efflux carrier family protein
Chr3_-_1860797 2.18 AT3G06145.1
AT3G06145
RING zinc finger protein
Chr3_-_7557969 2.16 AT3G21460.1
AT3G21460
Glutaredoxin family protein
Chr3_-_4008018 2.15 AT3G12610.1
DRT100
Leucine-rich repeat (LRR) family protein
Chr1_+_12851983 2.15 AT1G35140.1
PHI-1
Phosphate-responsive 1 family protein
Chr4_-_17355891 2.14 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr5_+_5238502 2.13 AT5G16030.5
AT5G16030
mental retardation GTPase activating protein
Chr5_+_7502427 2.13 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
Chr1_-_11216141 2.12 AT1G31330.1
PSAF
photosystem I subunit F
Chr2_-_15137012 2.10 AT2G36050.1
OFP15
ovate family protein 15
Chr1_+_5489145 2.09 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
Chr3_+_18049571 2.08 AT3G48730.1
GSA2
glutamate-1-semialdehyde 2,1-aminomutase 2
Chr5_-_7738535 2.07 AT5G23060.2
AT5G23060.1
CaS
calcium sensing receptor
Chr2_-_12277417 2.06 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr2_+_14384797 2.04 AT2G34060.1
AT2G34060
Peroxidase superfamily protein
Chr3_-_8589754 2.03 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr3_+_23345754 2.03 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr1_-_598657 2.02 AT1G02730.1
CSLD5
cellulose synthase-like D5
Chr4_+_12876822 2.01 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
Chr1_+_4868346 2.01 AT1G14250.1
AT1G14250
GDA1/CD39 nucleoside phosphatase family protein
Chr2_-_12277245 1.99 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr5_+_3889906 1.99 AT5G12050.1
AT5G12050
rho GTPase-activating protein
Chr5_-_8338032 1.99 AT5G24420.1
PGL5
6-phosphogluconolactonase 5
Chr4_-_16583075 1.98 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr1_+_17918207 1.97 AT1G48480.1
RKL1
receptor-like kinase 1
Chr1_+_4899045 1.97 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
Chr2_-_1824480 1.96 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
Chr5_+_1919080 1.96 AT5G06290.1
AT5G06290.2
2-Cys Prx B
2-cysteine peroxiredoxin B
Chr1_-_26515188 1.94 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr4_+_620691 1.94 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_-_2130451 1.94 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr5_-_3183984 1.94 AT5G10150.2
AT5G10150.1
AT5G10150
UPSTREAM OF FLC protein (DUF966)
Chr1_+_12267808 1.93 AT1G33811.1
AT1G33811
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_1702749 1.92 AT1G05675.1
AT1G05675
UDP-Glycosyltransferase superfamily protein
Chr1_+_7886323 1.92 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_+_208866 1.90 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
Chr3_-_19595834 1.89 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr4_+_7521257 1.88 AT4G12800.2
AT4G12800.1
PSAL
photosystem I subunit l
Chr5_-_23576084 1.86 AT5G58310.1
MES18
methyl esterase 18
Chr5_-_20940895 1.85 AT5G51550.1
EXL3
EXORDIUM like 3
Chr3_+_22902491 1.85 AT3G61870.1
AT3G61870.2
AT3G61870
plant/protein
Chr2_-_12173951 1.84 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr5_-_3183484 1.84 AT5G10150.3
AT5G10150.4
AT5G10150
UPSTREAM OF FLC protein (DUF966)
Chr1_+_7252111 1.84 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr4_+_8925571 1.84 AT4G15660.1
AT4G15660
Thioredoxin superfamily protein
Chr5_+_25969190 1.83 AT5G65010.2
ASN2
asparagine synthetase 2
Chr1_+_4839801 1.83 AT1G14150.1
AT1G14150.2
PnsL2
PsbQ-like 2
Chr5_+_25969035 1.82 AT5G65010.1
ASN2
asparagine synthetase 2
Chr5_+_21020014 1.82 AT5G51750.1
SBT1.3
subtilase 1.3
Chr5_-_7026533 1.81 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_-_3277930 1.81 AT3G10520.1
HB2
hemoglobin 2
Chr4_+_14517393 1.81 AT4G29610.1
AT4G29610
Cytidine/deoxycytidylate deaminase family protein
Chr4_+_13177356 1.81 AT4G25960.1
ABCB2
P-glycoprotein 2
Chr4_-_12772438 1.80 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr5_-_1293723 1.79 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
Chr5_+_8365601 1.78 AT5G24490.1
AT5G24490
30S ribosomal protein
Chr1_+_27991165 1.78 AT1G74470.1
AT1G74470
Pyridine nucleotide-disulfide oxidoreductase family protein
Chr2_-_19563960 1.78 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr2_+_19191247 1.78 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr2_-_7496292 1.77 AT2G17230.1
EXL5
EXORDIUM like 5
Chr1_-_28603932 1.77 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr1_+_25374072 1.77 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
Chr2_+_14216771 1.76 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr3_-_3027961 1.74 AT3G09870.1
AT3G09870
SAUR-like auxin-responsive protein family
Chr2_+_1033598 1.73 AT2G03410.1
AT2G03410
Mo25 family protein
Chr4_-_7316871 1.73 AT4G12320.1
CYP706A6
cytochrome P450, family 706, subfamily A, polypeptide 6
Chr2_-_11727654 1.71 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
Chr1_+_9421009 1.70 AT1G27120.1
AT1G27120.2
AT1G27120
Galactosyltransferase family protein
Chr5_+_4974671 1.69 AT5G15310.2
AT5G15310.4
AT5G15310.3
AT5G15310.1
MYB16
myb domain protein 16
Chr2_+_6542166 1.69 AT2G15090.1
KCS8
3-ketoacyl-CoA synthase 8
Chr1_+_8027294 1.68 AT1G22690.3
AT1G22690.2
AT1G22690
Gibberellin-regulated family protein
Chr5_-_7026753 1.68 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_+_12254888 1.68 AT2G28605.1
AT2G28605
Photosystem II reaction center PsbP family protein
Chr4_+_17986384 1.67 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
Chr3_-_19467455 1.67 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr5_+_25016860 1.67 AT5G62280.1
AT5G62280
DUF1442 family protein (DUF1442)
Chr5_-_7419335 1.66 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr2_+_1594588 1.66 AT2G04570.1
AT2G04570
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_15607966 1.66 AT1G41830.1
SKS6
SKU5-similar 6
Chr3_+_19845097 1.65 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
Chr1_-_26538437 1.64 AT1G70410.2
BCA4
beta carbonic anhydrase 4
Chr1_+_11396402 1.64 AT1G31800.1
CYP97A3
cytochrome P450, family 97, subfamily A, polypeptide 3
Chr5_-_24990331 1.64 AT5G62220.1
GT18
glycosyltransferase 18
Chr1_+_18802552 1.63 AT1G50732.1
AT1G50732
transmembrane protein
Chr1_+_23911024 1.62 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr1_-_28581315 1.62 AT1G76160.1
sks5
SKU5 similar 5
Chr1_+_19879405 1.61 AT1G53300.1
TTL1
tetratricopetide-repeat thioredoxin-like 1
Chr5_+_22474142 1.61 AT5G55480.1
SVL1
SHV3-like 1
Chr4_+_15819489 1.60 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr2_-_19617681 1.60 AT2G47930.1
AGP26
arabinogalactan protein 26
Chr1_-_24023424 1.60 AT1G64640.1
ENODL8
early nodulin-like protein 8
Chr2_-_7727404 1.59 AT2G17780.2
AT2G17780.4
AT2G17780.5
AT2G17780.8
AT2G17780.10
AT2G17780.9
AT2G17780.1
AT2G17780.6
AT2G17780.3
AT2G17780.7
MCA2
PLAC8 family protein
Chr5_+_23374873 1.58 AT5G57700.3
AT5G57700.2
AT5G57700.1
AT5G57700.5
AT5G57700
BNR/Asp-box repeat family protein
Chr1_+_11343854 1.58 AT1G31690.1
AT1G31690
Copper amine oxidase family protein
Chr3_-_20576249 1.58 AT3G55500.1
EXPA16
expansin A16
Chr4_-_947075 1.57 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr5_-_21092410 1.57 AT5G51890.1
AT5G51890
Peroxidase superfamily protein
Chr5_-_19899301 1.57 AT5G49100.1
AT5G49100
vitellogenin-like protein
Chr5_-_14199431 1.56 AT5G36120.1
CCB3
cofactor assembly, complex C (B6F)
Chr4_-_7587099 1.56 AT4G12970.1
STOMAGEN
stomagen
Chr3_+_5934033 1.55 AT3G17350.1
AT3G17350.2
AT3G17350
wall-associated receptor kinase carboxy-terminal protein
Chr5_-_21724642 1.55 AT5G53490.3
AT5G53490.2
AT5G53490.1
AT5G53490.4
AT5G53490
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_9342223 1.54 AT3G25660.1
AT3G25660
Amidase family protein
Chr1_-_26537422 1.54 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
Chr4_+_160643 1.54 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr1_-_25649254 1.54 AT1G68400.1
AT1G68400
leucine-rich repeat transmembrane protein kinase family protein
Chr1_-_1307973 1.53 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
Chr1_+_1231452 1.53 AT1G04520.1
PDLP2
plasmodesmata-located protein 2
Chr3_+_8610979 1.53 AT3G23840.1
AT3G23840
HXXXD-type acyl-transferase family protein
Chr1_+_9544410 1.53 AT1G27480.1
AT1G27480
alpha/beta-Hydrolases superfamily protein
Chr2_-_183639 1.52 AT2G01420.3
AT2G01420.1
AT2G01420.2
PIN4
Auxin efflux carrier family protein
Chr5_+_7103384 1.52 AT5G20935.1
AT5G20935.2
CRR42
DUF3148 family protein
Chr3_-_1136397 1.51 AT3G04290.1
LTL1
Li-tolerant lipase 1
Chr1_+_24057297 1.50 AT1G64770.1
AT1G64770.2
PnsB2
NDH-dependent cyclic electron flow 1
Chr2_+_11856571 1.50 AT2G27820.1
PD1
prephenate dehydratase 1
Chr4_-_18068293 1.49 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr3_+_7280792 1.49 AT3G20820.1
AT3G20820
Leucine-rich repeat (LRR) family protein
Chr4_+_17643110 1.49 AT4G37550.4
AT4G37550.1
AT4G37550.2
AT4G37550
Acetamidase/Formamidase family protein
Chr3_-_23417119 1.49 AT3G63410.1
APG1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_8027126 1.48 AT1G22690.1
AT1G22690
Gibberellin-regulated family protein
Chr4_-_18067873 1.48 AT4G38660.2
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr3_-_9255083 1.47 AT3G25500.1
AFH1
formin homology 1
Chr2_+_2322215 1.47 AT2G05990.1
AT2G05990.2
MOD1
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_3443957 1.47 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
Chr4_-_8016582 1.46 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
Chr4_+_17643548 1.46 AT4G37550.6
AT4G37550.3
AT4G37550
Acetamidase/Formamidase family protein
Chr5_+_4535367 1.46 AT5G14060.1
AT5G14060.2
AT5G14060.3
CARAB-AK-LYS
Aspartate kinase family protein
Chr1_-_18413016 1.45 AT1G49750.1
AT1G49750
Leucine-rich repeat (LRR) family protein
Chr4_-_8454144 1.45 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
Chr2_+_15289975 1.45 AT2G36430.1
AT2G36430
transmembrane protein, putative (DUF247)
Chr4_+_14566183 1.45 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4
Chr1_-_3444360 1.44 AT1G10470.1
ARR4
response regulator 4
Chr4_+_14192569 1.44 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
Chr4_-_947249 1.43 AT4G02130.1
GATL6
galacturonosyltransferase 6
Chr5_+_463073 1.43 AT5G02260.1
EXPA9
expansin A9
Chr3_+_8194606 1.43 AT3G23050.1
AT3G23050.3
AT3G23050.2
IAA7
indole-3-acetic acid 7
Chr3_-_8902835 1.43 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
Chr2_+_10667898 1.41 AT2G25080.1
GPX1
glutathione peroxidase 1
Chr1_+_24057063 1.41 AT1G64770.3
PnsB2
NDH-dependent cyclic electron flow 1
Chr4_+_5740219 1.41 AT4G08950.1
EXO
Phosphate-responsive 1 family protein
Chr1_-_6283348 1.41 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
Chr3_-_1855063 1.41 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
Chr5_-_23406479 1.41 AT5G57780.1
P1R1
transcription factor
Chr1_-_3518035 1.40 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr2_+_417427 1.40 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
Chr5_-_24326827 1.40 AT5G60490.1
FLA12
FASCICLIN-like arabinogalactan-protein 12
Chr1_-_29638773 1.39 AT1G78830.1
AT1G78830
Curculin-like (mannose-binding) lectin family protein
Chr3_-_2944457 1.39 AT3G09580.1
AT3G09580
FAD/NAD(P)-binding oxidoreductase family protein
Chr3_+_288741 1.39 AT3G01810.2
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr3_+_957112 1.39 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
Chr1_+_28078852 1.39 AT1G74730.1
AT1G74730
transmembrane protein, putative (DUF1118)
Chr4_+_10949573 1.38 AT4G20270.1
BAM3
Leucine-rich receptor-like protein kinase family protein
Chr3_-_6980523 1.38 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr3_+_4128334 1.38 AT3G12930.1
AT3G12930
Lojap-related protein
Chr3_-_23261927 1.38 AT3G62930.1
AT3G62930
Thioredoxin superfamily protein
Chr3_+_288538 1.38 AT3G01810.3
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr1_-_8235019 1.38 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_22317070 1.38 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr5_+_7168106 1.38 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr2_-_15540139 1.37 AT2G36990.1
SIGF
RNApolymerase sigma-subunit F
Chr2_-_12646057 1.37 AT2G29550.1
TUB7
tubulin beta-7 chain
Chr3_+_956862 1.37 AT3G03780.2
MS2
methionine synthase 2
Chr5_+_16151772 1.37 AT5G40380.3
AT5G40380.2
CRK42
cysteine-rich RLK (RECEPTOR-like protein kinase) 42
Chr2_+_8059106 1.37 AT2G18560.1
AT2G18560
UDP-Glycosyltransferase superfamily protein
Chr4_+_17254290 1.37 AT4G36570.1
RL3
RAD-like 3
Chr5_+_26646900 1.36 AT5G66740.1
AT5G66740
spindle assembly abnormal protein (DUF620)

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G15270

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 10.3 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.7 2.2 GO:0048872 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.7 2.1 GO:0042407 cristae formation(GO:0042407)
0.7 0.7 GO:0009915 phloem sucrose loading(GO:0009915)
0.7 4.0 GO:0070981 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.6 1.8 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.6 1.7 GO:0035017 cuticle pattern formation(GO:0035017)
0.6 2.8 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.5 0.5 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.5 2.0 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.5 3.0 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.5 2.0 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.5 0.5 GO:2000045 regulation of G1/S transition of mitotic cell cycle(GO:2000045)
0.5 8.8 GO:0006949 syncytium formation(GO:0006949)
0.5 1.4 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.5 1.8 GO:0015669 gas transport(GO:0015669)
0.4 3.1 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.4 1.3 GO:0015840 urea transport(GO:0015840) one-carbon compound transport(GO:0019755)
0.4 2.5 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.4 2.1 GO:0071277 cellular response to calcium ion(GO:0071277)
0.4 3.3 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.4 2.2 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.4 2.2 GO:0009650 UV protection(GO:0009650)
0.3 5.4 GO:0010315 auxin efflux(GO:0010315)
0.3 2.7 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.3 1.0 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.3 2.3 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.3 1.0 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.3 1.0 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755) vacuolar transmembrane transport(GO:0034486)
0.3 2.2 GO:0010067 procambium histogenesis(GO:0010067)
0.3 1.0 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.3 1.6 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.3 3.1 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.3 3.0 GO:0007130 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.3 1.5 GO:0010226 response to lithium ion(GO:0010226)
0.3 1.2 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.3 1.5 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.3 0.9 GO:1904667 negative regulation of protein ubiquitination(GO:0031397) negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.3 2.1 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.3 2.9 GO:0010052 guard cell differentiation(GO:0010052)
0.3 1.5 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.3 1.2 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.3 1.2 GO:0010480 microsporocyte differentiation(GO:0010480)
0.3 5.2 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.3 0.8 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.3 1.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.3 0.8 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.3 1.9 GO:0080117 secondary growth(GO:0080117)
0.3 1.4 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.3 1.4 GO:0046713 borate transport(GO:0046713)
0.3 1.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.3 0.8 GO:0031441 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.3 1.0 GO:0009660 amyloplast organization(GO:0009660)
0.3 1.6 GO:0051098 regulation of binding(GO:0051098)
0.3 1.5 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.3 1.0 GO:0050792 regulation of viral process(GO:0050792)
0.2 3.5 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.2 3.2 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.2 15.2 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 1.2 GO:0042549 photosystem II stabilization(GO:0042549)
0.2 1.4 GO:0090057 root radial pattern formation(GO:0090057)
0.2 1.6 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.2 2.9 GO:0009750 response to fructose(GO:0009750)
0.2 2.0 GO:0071249 cellular response to nitrate(GO:0071249)
0.2 1.3 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.2 1.7 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 1.1 GO:0043692 monoterpene metabolic process(GO:0043692)
0.2 3.9 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.2 0.4 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.2 17.4 GO:0045490 pectin catabolic process(GO:0045490)
0.2 2.0 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.2 0.8 GO:0099636 cytoplasmic streaming(GO:0099636)
0.2 0.8 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.2 0.4 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.2 0.8 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.2 1.5 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.2 0.6 GO:0090549 response to carbon starvation(GO:0090549)
0.2 2.2 GO:0007143 female meiotic division(GO:0007143)
0.2 8.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.2 1.9 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.2 1.6 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.2 0.5 GO:0034389 lipid particle organization(GO:0034389)
0.2 0.8 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.2 0.3 GO:1990937 xylan acetylation(GO:1990937)
0.2 0.5 GO:0033194 response to hydroperoxide(GO:0033194)
0.2 2.7 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.2 0.5 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.2 1.0 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.2 0.6 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.2 0.5 GO:0036292 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.2 0.9 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.2 2.3 GO:0030497 fatty acid elongation(GO:0030497)
0.1 2.7 GO:0048829 root cap development(GO:0048829)
0.1 2.2 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.7 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.7 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 1.1 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 2.7 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 0.4 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.1 0.8 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.7 GO:0019419 sulfate reduction(GO:0019419)
0.1 1.8 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 0.1 GO:0006529 asparagine biosynthetic process(GO:0006529)
0.1 0.7 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 0.4 GO:0010338 leaf formation(GO:0010338)
0.1 1.9 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 3.8 GO:0006284 base-excision repair(GO:0006284)
0.1 0.8 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.8 GO:0009635 response to herbicide(GO:0009635)
0.1 0.5 GO:0043447 alkane biosynthetic process(GO:0043447)
0.1 0.8 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.4 GO:0010446 response to alkaline pH(GO:0010446)
0.1 0.5 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 1.3 GO:1902222 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.1 0.4 GO:1990532 stress response to nickel ion(GO:1990532)
0.1 0.7 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 1.5 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 1.7 GO:0045493 xylan catabolic process(GO:0045493)
0.1 0.8 GO:0015837 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 0.6 GO:0080175 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) phragmoplast microtubule organization(GO:0080175) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.1 0.4 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.1 4.6 GO:0009827 plant-type cell wall modification(GO:0009827)
0.1 0.6 GO:0010586 miRNA metabolic process(GO:0010586) miRNA catabolic process(GO:0010587)
0.1 4.1 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.3 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.1 2.0 GO:0044070 regulation of anion transport(GO:0044070)
0.1 0.6 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.1 0.5 GO:0030656 regulation of vitamin metabolic process(GO:0030656) regulation of triglyceride metabolic process(GO:0090207) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.1 3.0 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.1 0.7 GO:0080187 floral organ senescence(GO:0080187)
0.1 6.1 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.3 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.1 0.3 GO:1990110 callus formation(GO:1990110)
0.1 0.4 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 0.2 GO:0090172 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.1 1.0 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.1 0.9 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.1 1.4 GO:0033238 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.1 4.9 GO:0048825 cotyledon development(GO:0048825)
0.1 0.3 GO:1990884 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.1 1.4 GO:0010274 hydrotropism(GO:0010274)
0.1 0.5 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 1.4 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.0 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 0.5 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.1 1.9 GO:0010152 pollen maturation(GO:0010152)
0.1 2.1 GO:0010025 wax biosynthetic process(GO:0010025)
0.1 1.7 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.5 GO:0035627 ceramide transport(GO:0035627)
0.1 3.7 GO:0009851 auxin biosynthetic process(GO:0009851)
0.1 0.4 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.1 0.9 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 0.5 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 0.7 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 1.3 GO:0015743 malate transport(GO:0015743)
0.1 0.5 GO:0010358 leaf shaping(GO:0010358)
0.1 0.3 GO:0071836 nectar secretion(GO:0071836)
0.1 0.3 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.1 0.3 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.4 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 1.0 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 1.2 GO:0000919 cell plate assembly(GO:0000919)
0.1 1.5 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.3 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 1.2 GO:0016109 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.1 1.0 GO:0009086 methionine biosynthetic process(GO:0009086)
0.1 0.8 GO:0046451 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.1 0.5 GO:0010047 fruit dehiscence(GO:0010047)
0.1 1.0 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 1.4 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 0.4 GO:0006471 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.1 5.4 GO:0009875 pollen-pistil interaction(GO:0009875)
0.1 1.7 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.1 0.2 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 6.2 GO:0009606 tropism(GO:0009606)
0.1 1.5 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.1 0.2 GO:0071281 cellular response to iron ion(GO:0071281)
0.1 0.9 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.1 1.4 GO:0071483 cellular response to blue light(GO:0071483)
0.1 1.4 GO:0008360 regulation of cell shape(GO:0008360)
0.1 1.1 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 4.3 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.1 4.0 GO:0007267 cell-cell signaling(GO:0007267)
0.1 1.4 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.3 GO:2000574 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.1 1.2 GO:0000373 Group II intron splicing(GO:0000373)
0.1 2.0 GO:0016129 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.1 0.2 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.7 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.9 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.2 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.1 0.8 GO:0001709 cell fate determination(GO:0001709)
0.1 0.2 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.1 1.7 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.1 0.3 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.1 0.7 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.1 1.0 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.1 0.3 GO:0009963 positive regulation of flavonoid biosynthetic process(GO:0009963)
0.1 0.5 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 2.1 GO:0035266 meristem growth(GO:0035266)
0.1 1.1 GO:0015851 purine nucleobase transport(GO:0006863) nucleobase transport(GO:0015851)
0.1 0.4 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.2 GO:0009662 etioplast organization(GO:0009662)
0.0 0.3 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 1.3 GO:0016556 mRNA modification(GO:0016556)
0.0 0.7 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.6 GO:0009641 shade avoidance(GO:0009641)
0.0 0.0 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.0 0.3 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.0 0.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.0 0.5 GO:0051814 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) transport of virus(GO:0046794) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.4 GO:0015914 phospholipid transport(GO:0015914)
0.0 4.6 GO:0015979 photosynthesis(GO:0015979)
0.0 0.2 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.5 GO:0048658 anther wall tapetum development(GO:0048658)
0.0 0.5 GO:0032544 plastid translation(GO:0032544)
0.0 0.3 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.2 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 1.1 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.2 GO:0046683 response to organophosphorus(GO:0046683)
0.0 0.2 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.2 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.1 GO:0009093 cysteine catabolic process(GO:0009093)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.7 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.3 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.1 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.0 0.3 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.6 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.4 GO:0015693 magnesium ion transport(GO:0015693)
0.0 1.6 GO:0016485 protein processing(GO:0016485)
0.0 0.4 GO:0006826 iron ion transport(GO:0006826)
0.0 0.2 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 1.5 GO:0042127 regulation of cell proliferation(GO:0042127)
0.0 1.0 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 1.0 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.2 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 0.0 GO:0048448 stamen morphogenesis(GO:0048448)
0.0 0.3 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.0 0.4 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.3 GO:0051555 flavone metabolic process(GO:0051552) flavone biosynthetic process(GO:0051553) flavonol metabolic process(GO:0051554) flavonol biosynthetic process(GO:0051555)
0.0 0.7 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.6 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.5 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.2 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.0 0.3 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.2 GO:0044375 regulation of peroxisome size(GO:0044375)
0.0 3.8 GO:0009657 plastid organization(GO:0009657)
0.0 0.7 GO:1903825 organic acid transmembrane transport(GO:1903825) carboxylic acid transmembrane transport(GO:1905039)
0.0 0.7 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871) 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.2 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.0 0.3 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.4 GO:0010227 floral organ abscission(GO:0010227)
0.0 1.0 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.4 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.8 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 2.5 GO:0009860 pollen tube growth(GO:0009860)
0.0 1.9 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.3 GO:0042335 cuticle development(GO:0042335)
0.0 0.5 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.2 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.6 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.1 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 0.3 GO:0098781 ncRNA transcription(GO:0098781)
0.0 1.3 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.2 GO:0016925 protein sumoylation(GO:0016925)
0.0 2.5 GO:0048511 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.0 0.3 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.6 GO:0009960 endosperm development(GO:0009960)
0.0 0.1 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.6 GO:0006476 protein deacetylation(GO:0006476)
0.0 0.3 GO:0080022 primary root development(GO:0080022)
0.0 0.1 GO:0048194 COPI-coated vesicle budding(GO:0035964) Golgi vesicle budding(GO:0048194) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.0 1.4 GO:0048528 post-embryonic root development(GO:0048528)
0.0 0.6 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.5 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 1.1 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.3 GO:0042330 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.3 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.1 GO:0010231 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.0 1.1 GO:0006869 lipid transport(GO:0006869)
0.0 0.2 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.7 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.2 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.3 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 0.2 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 1.0 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 1.8 GO:0045944 positive regulation of transcription from RNA polymerase II promoter(GO:0045944)
0.0 0.2 GO:0010091 trichome branching(GO:0010091)
0.0 0.1 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.4 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.1 GO:0048766 root hair initiation(GO:0048766)
0.0 0.1 GO:0022616 DNA strand elongation involved in DNA replication(GO:0006271) DNA strand elongation(GO:0022616)
0.0 0.3 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 5.4 GO:0010007 magnesium chelatase complex(GO:0010007)
0.8 6.4 GO:0009538 photosystem I reaction center(GO:0009538)
0.7 6.6 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.5 1.4 GO:0043674 lateral plasma membrane(GO:0016328) pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.4 1.8 GO:0044420 extracellular matrix component(GO:0044420)
0.4 2.0 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.4 2.6 GO:0030893 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.3 5.0 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.3 3.8 GO:0045298 tubulin complex(GO:0045298)
0.3 0.8 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.3 1.1 GO:0032807 DNA ligase IV complex(GO:0032807)
0.3 2.4 GO:0010369 chromocenter(GO:0010369)
0.2 1.0 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.2 5.9 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.2 0.7 GO:0009501 amyloplast(GO:0009501)
0.2 1.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.2 1.0 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.2 11.3 GO:0010287 plastoglobule(GO:0010287)
0.2 0.5 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.2 0.5 GO:0005775 vacuolar lumen(GO:0005775)
0.1 8.7 GO:0009528 plastid inner membrane(GO:0009528)
0.1 0.6 GO:0032044 DSIF complex(GO:0032044)
0.1 6.2 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 3.3 GO:0009574 preprophase band(GO:0009574)
0.1 0.5 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.1 2.1 GO:0009531 secondary cell wall(GO:0009531)
0.1 20.7 GO:0009505 plant-type cell wall(GO:0009505)
0.1 2.0 GO:0010319 stromule(GO:0010319)
0.1 2.3 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.7 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 0.5 GO:0030126 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.1 0.3 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 12.5 GO:0099503 secretory vesicle(GO:0099503)
0.1 0.2 GO:0042646 plastid nucleoid(GO:0042646)
0.1 1.2 GO:0048500 signal recognition particle(GO:0048500)
0.1 0.6 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 1.5 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.9 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 0.7 GO:0042555 MCM complex(GO:0042555)
0.1 0.3 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 21.6 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 0.2 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 0.3 GO:0030286 dynein complex(GO:0030286)
0.1 1.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 0.7 GO:0030125 clathrin vesicle coat(GO:0030125)
0.1 0.3 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 0.8 GO:0072686 mitotic spindle(GO:0072686)
0.1 0.2 GO:0030896 checkpoint clamp complex(GO:0030896)
0.1 0.8 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.3 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 1.9 GO:0005764 lysosome(GO:0005764)
0.0 0.3 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.3 GO:0044545 NSL complex(GO:0044545)
0.0 0.6 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.0 9.6 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.4 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 17.9 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.4 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.2 GO:0000795 synaptonemal complex(GO:0000795)
0.0 8.5 GO:0031225 anchored component of membrane(GO:0031225)
0.0 3.4 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.3 GO:0035619 root hair tip(GO:0035619)
0.0 3.2 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 5.0 GO:0048046 apoplast(GO:0048046)
0.0 0.2 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 2.7 GO:0031226 intrinsic component of plasma membrane(GO:0031226)
0.0 0.8 GO:0009504 cell plate(GO:0009504)
0.0 0.2 GO:0055038 recycling endosome membrane(GO:0055038)
0.0 2.7 GO:0005874 microtubule(GO:0005874)
0.0 0.3 GO:0009986 cell surface(GO:0009986)
0.0 0.3 GO:0005801 cis-Golgi network(GO:0005801)
0.0 52.8 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.5 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 1.3 GO:0042995 cell projection(GO:0042995)
0.0 0.2 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.1 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276) proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.0 0.3 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.0 0.2 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.1 GO:0005844 polysome(GO:0005844)
0.0 0.1 GO:0017119 Golgi transport complex(GO:0017119)
0.0 1.1 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 4.0 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
1.1 3.4 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.9 5.4 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.7 2.2 GO:0015026 coreceptor activity(GO:0015026)
0.7 2.0 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.6 1.9 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.6 2.5 GO:0050162 oxalate oxidase activity(GO:0050162)
0.6 1.8 GO:0005344 oxygen transporter activity(GO:0005344)
0.6 2.4 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.6 15.5 GO:0016168 chlorophyll binding(GO:0016168)
0.6 2.8 GO:0042084 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.5 1.6 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.5 2.1 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.5 1.5 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.5 2.5 GO:0004072 aspartate kinase activity(GO:0004072)
0.4 1.3 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.4 2.1 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.4 1.2 GO:0010242 oxygen evolving activity(GO:0010242)
0.4 2.3 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.4 9.0 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.4 1.9 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.4 1.5 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.4 3.0 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.4 2.2 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.4 2.2 GO:0004126 cytidine deaminase activity(GO:0004126)
0.4 1.8 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.4 1.1 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.3 7.5 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.3 1.0 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.3 2.0 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.3 1.0 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.3 1.0 GO:0035591 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.3 0.9 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.3 1.8 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.3 7.3 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.3 0.9 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.3 1.1 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.3 0.8 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.3 6.8 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.3 1.4 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.3 3.0 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.3 0.8 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.2 1.0 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.2 1.2 GO:0050113 inositol oxygenase activity(GO:0050113)
0.2 1.0 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 0.7 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.2 0.7 GO:0004359 glutaminase activity(GO:0004359)
0.2 0.5 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 2.9 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.2 3.0 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.2 2.0 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.2 6.4 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 1.3 GO:0016841 ammonia-lyase activity(GO:0016841)
0.2 5.9 GO:0008810 cellulase activity(GO:0008810)
0.2 1.7 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.2 0.9 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.2 1.7 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 1.9 GO:0008131 primary amine oxidase activity(GO:0008131)
0.2 1.6 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 0.8 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.2 2.0 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.2 1.6 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.2 0.8 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.2 3.0 GO:0016018 cyclosporin A binding(GO:0016018)
0.2 0.8 GO:0016882 cyclo-ligase activity(GO:0016882)
0.2 1.1 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.2 2.0 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.2 1.1 GO:0004567 beta-mannosidase activity(GO:0004567)
0.2 0.7 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.2 1.7 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.2 0.5 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.2 0.7 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.2 0.5 GO:1990465 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.2 1.4 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.2 11.2 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.2 0.7 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.2 1.0 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.2 3.6 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 1.1 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.2 3.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.2 0.5 GO:0097617 annealing helicase activity(GO:0036310) annealing activity(GO:0097617)
0.2 0.6 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.2 1.2 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 1.5 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.4 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 0.7 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 1.8 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.3 GO:0004484 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.1 0.4 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 1.7 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 0.8 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 4.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.5 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.7 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.1 4.3 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 1.7 GO:0097599 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556) xylanase activity(GO:0097599)
0.1 0.7 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.1 1.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.9 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.8 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 0.4 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.1 0.4 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 0.4 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.1 0.8 GO:0032977 membrane insertase activity(GO:0032977)
0.1 0.5 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 0.6 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.8 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 0.5 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.3 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.1 1.0 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.6 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 1.1 GO:0016161 beta-amylase activity(GO:0016161)
0.1 2.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 4.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.5 GO:0015446 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.1 0.4 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 0.7 GO:0010011 auxin binding(GO:0010011)
0.1 0.3 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.1 0.8 GO:0015923 alpha-mannosidase activity(GO:0004559) mannosidase activity(GO:0015923)
0.1 0.7 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 0.5 GO:1902388 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.4 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.1 3.8 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 5.7 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.3 GO:0019789 SUMO transferase activity(GO:0019789)
0.1 0.4 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.1 0.3 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 0.3 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.3 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.1 1.1 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.1 0.5 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.1 1.5 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.1 0.6 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 1.1 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.1 1.1 GO:0016872 intramolecular lyase activity(GO:0016872)
0.1 1.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 1.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.3 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 0.2 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 0.5 GO:0005047 signal recognition particle binding(GO:0005047)
0.1 0.5 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 0.4 GO:0015181 arginine transmembrane transporter activity(GO:0015181) L-lysine transmembrane transporter activity(GO:0015189)
0.1 0.9 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.1 0.5 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 0.5 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.1 0.3 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 0.2 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.1 1.3 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.1 0.3 GO:0045502 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 1.0 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.1 0.9 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 0.5 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 1.3 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.6 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 2.4 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 0.4 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 0.5 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.5 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 1.7 GO:0015205 nucleobase transmembrane transporter activity(GO:0015205)
0.1 0.5 GO:0004096 catalase activity(GO:0004096)
0.1 2.3 GO:0003727 single-stranded RNA binding(GO:0003727)
0.1 0.3 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.0 0.3 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.2 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.5 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 1.8 GO:0043022 ribosome binding(GO:0043022)
0.0 0.2 GO:0016436 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.2 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 1.0 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.2 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.0 2.0 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.3 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.2 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.4 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.0 0.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.6 GO:0016844 strictosidine synthase activity(GO:0016844)
0.0 0.8 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.2 GO:0019825 oxygen binding(GO:0019825)
0.0 0.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.4 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.3 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.4 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 1.3 GO:0005179 hormone activity(GO:0005179)
0.0 0.6 GO:0016157 sucrose synthase activity(GO:0016157)
0.0 0.6 GO:0070628 proteasome binding(GO:0070628)
0.0 0.4 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.7 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 2.1 GO:0016866 intramolecular transferase activity(GO:0016866)
0.0 4.0 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.7 GO:0030276 clathrin binding(GO:0030276)
0.0 4.8 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.0 0.4 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.4 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.2 GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.0 0.1 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.0 0.2 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.0 3.1 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 0.4 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.2 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.4 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.4 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 1.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.3 GO:0035198 miRNA binding(GO:0035198)
0.0 0.1 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.0 0.5 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.5 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 1.4 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.2 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.0 0.6 GO:0031490 chromatin DNA binding(GO:0031490)
0.0 1.1 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.4 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.2 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.4 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.1 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.0 0.7 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 5.9 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.1 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 2.1 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.8 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.1 GO:0015631 tubulin binding(GO:0015631)
0.0 0.7 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 2.0 GO:0030246 carbohydrate binding(GO:0030246)
0.0 2.3 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 0.2 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.0 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.0 0.2 GO:0008375 acetylglucosaminyltransferase activity(GO:0008375)
0.0 0.1 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.1 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 3.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.1 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.3 0.9 PID IL12 2PATHWAY IL12-mediated signaling events
0.2 1.1 PID P53 REGULATION PATHWAY p53 pathway
0.2 1.2 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.2 1.5 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.2 1.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.4 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.1 0.5 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.1 0.5 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.1 0.8 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.1 0.6 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.4 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.5 1.4 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.3 1.0 REACTOME IL 6 SIGNALING Genes involved in Interleukin-6 signaling
0.3 0.9 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.3 1.5 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.2 0.6 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 1.0 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.2 1.5 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.2 0.5 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.2 0.8 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.4 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.1 1.1 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 0.7 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.6 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.3 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 1.0 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.1 0.3 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.2 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.2 REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
0.0 0.1 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination