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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G15210

Z-value: 0.99

Transcription factors associated with AT3G15210

Gene Symbol Gene ID Gene Info
AT3G15210
AT3G15210 ethylene responsive element binding factor 4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF4arTal_v1_Chr3_+_5121303_5121303-0.721.6e-05Click!

Activity profile of AT3G15210 motif

Sorted Z-values of AT3G15210 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_18098633 4.50 AT4G38770.1
PRP4
proline-rich protein 4
Chr2_-_16950705 4.43 AT2G40610.1
EXPA8
expansin A8
Chr1_+_3157501 4.40 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr1_-_20648891 4.13 AT1G55330.1
AGP21
arabinogalactan protein 21
Chr4_-_7493080 3.82 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr3_-_21523375 3.79 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein
Chr3_-_11013451 3.49 AT3G29030.1
EXPA5
expansin A5
Chr2_-_18744322 3.33 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
Chr5_-_22560461 3.31 AT5G55730.2
AT5G55730.1
FLA1
FASCICLIN-like arabinogalactan 1
Chr2_+_2199151 3.30 AT2G05790.1
AT2G05790
O-Glycosyl hydrolases family 17 protein
Chr1_+_10371675 3.29 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_8940833 3.26 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr3_-_3357754 3.20 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_26767599 3.06 AT5G67070.1
RALFL34
ralf-like 34
Chr1_+_9740508 2.94 AT1G27950.1
LTPG1
glycosylphosphatidylinositol-anchored lipid protein transfer 1
Chr3_+_23345754 2.94 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr3_-_3356811 2.82 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_152446 2.81 AT5G01370.1
ACI1
ALC-interacting protein 1
Chr2_-_15789605 2.76 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr2_-_15790139 2.75 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr3_-_15617149 2.73 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_3880391 2.72 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr1_-_6999839 2.72 AT1G20190.1
EXPA11
expansin 11
Chr3_-_15617309 2.70 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_17918207 2.69 AT1G48480.1
RKL1
receptor-like kinase 1
Chr4_+_14517393 2.64 AT4G29610.1
AT4G29610
Cytidine/deoxycytidylate deaminase family protein
Chr2_-_15137012 2.61 AT2G36050.1
OFP15
ovate family protein 15
Chr1_-_464981 2.60 AT1G02335.1
GL22
germin-like protein subfamily 2 member 2 precursor
Chr4_+_620691 2.59 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_-_6999523 2.58 AT1G20190.2
EXPA11
expansin 11
Chr5_-_7026533 2.57 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_+_7502427 2.56 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
Chr1_+_310169 2.50 AT1G01900.1
SBTI1.1
subtilase family protein
Chr1_+_27338034 2.50 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr3_-_19595834 2.50 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr5_-_671687 2.49 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
Chr5_-_7026753 2.49 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_7531108 2.48 AT1G21500.1
AT1G21500
hypothetical protein
Chr3_+_18262290 2.48 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
Chr5_+_2803833 2.43 AT5G08640.1
AT5G08640.2
FLS1
flavonol synthase 1
Chr5_-_18026077 2.39 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr3_-_4744263 2.39 AT3G14240.1
AT3G14240
Subtilase family protein
Chr3_+_5314817 2.34 AT3G15680.1
AT3G15680.2
AT3G15680
Ran BP2/NZF zinc finger-like superfamily protein
Chr5_+_5078200 2.34 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr4_-_8307934 2.32 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr4_+_9556783 2.31 AT4G16980.1
AT4G16980
arabinogalactan-protein family
Chr1_+_11343854 2.30 AT1G31690.1
AT1G31690
Copper amine oxidase family protein
Chr4_-_18067873 2.30 AT4G38660.2
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr1_+_26141726 2.27 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr4_-_10278794 2.26 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
Chr5_-_753657 2.26 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
Chr4_-_18068293 2.24 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr2_-_7496292 2.24 AT2G17230.1
EXL5
EXORDIUM like 5
Chr3_-_20576249 2.22 AT3G55500.1
EXPA16
expansin A16
Chr5_-_24990331 2.22 AT5G62220.1
GT18
glycosyltransferase 18
Chr1_+_10810877 2.21 AT1G30520.4
AT1G30520.3
AAE14
acyl-activating enzyme 14
Chr5_+_15742543 2.20 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
Chr5_+_426226 2.20 AT5G02160.1
AT5G02160
transmembrane protein
Chr5_-_25373904 2.19 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
Chr1_-_4530222 2.18 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr3_-_8902835 2.18 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
Chr1_+_10810397 2.16 AT1G30520.1
AT1G30520.2
AAE14
acyl-activating enzyme 14
Chr3_-_6436046 2.16 AT3G18710.1
PUB29
plant U-box 29
Chr1_+_907523 2.16 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
Chr4_+_6100714 2.16 AT4G09650.1
ATPD
F-type H+-transporting ATPase subunit delta
Chr3_+_19417372 2.15 AT3G52370.2
AT3G52370.1
FLA15
FASCICLIN-like arabinogalactan protein 15 precursor
Chr4_-_15429113 2.15 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
Chr1_-_22317070 2.11 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr4_+_13388290 2.09 AT4G26520.2
AT4G26520.1
AT4G26520.3
FBA7
Aldolase superfamily protein
Chr1_-_4265156 2.09 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr3_-_22972239 2.08 AT3G62020.2
AT3G62020.1
GLP10
germin-like protein 10
Chr5_-_8338032 2.08 AT5G24420.1
PGL5
6-phosphogluconolactonase 5
Chr3_-_18559326 2.08 AT3G50060.1
MYB77
myb domain protein 77
Chr2_+_19145218 2.08 AT2G46630.1
AT2G46630
serine/arginine repetitive matrix protein
Chr3_+_3698658 2.07 AT3G11700.1
FLA18
FASCICLIN-like arabinogalactan protein 18 precursor
Chr5_-_3278461 2.06 AT5G10430.1
AGP4
arabinogalactan protein 4
Chr2_+_14216771 2.06 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr1_+_23911024 2.06 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr2_+_12805667 2.05 AT2G30010.2
AT2G30010.1
TBL45
TRICHOME BIREFRINGENCE-LIKE 45
Chr1_-_5858446 2.05 AT1G17140.1
AT1G17140.2
ICR1
interactor of constitutive active rops 1
Chr4_+_14304921 2.05 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
Chr3_+_23266227 2.05 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
Chr5_+_20945676 2.04 AT5G51560.1
AT5G51560
Leucine-rich repeat protein kinase family protein
Chr4_+_15819489 2.04 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr1_+_28428671 2.03 AT1G75710.1
AT1G75710
C2H2-like zinc finger protein
Chr3_+_2564153 2.03 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr3_-_20341103 2.03 AT3G54890.3
AT3G54890.4
AT3G54890.2
AT3G54890.1
LHCA1
chlorophyll a-b binding protein 6
Chr1_+_25574381 2.02 AT1G68238.1
AT1G68238
transmembrane protein
Chr1_-_26515188 2.01 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr3_-_19467455 2.00 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr3_+_19421397 2.00 AT3G52380.1
CP33
chloroplast RNA-binding protein 33
Chr5_+_2680401 2.00 AT5G08330.1
TCP11
TCP family transcription factor
Chr3_+_2563803 1.98 AT3G08030.1
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr2_-_12173951 1.97 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr4_+_13133402 1.97 AT4G25830.1
AT4G25830
Uncharacterized protein family (UPF0497)
Chr1_-_8559066 1.97 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr5_+_26646900 1.96 AT5G66740.1
AT5G66740
spindle assembly abnormal protein (DUF620)
Chr3_-_6980523 1.96 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr4_+_13388719 1.96 AT4G26520.4
FBA7
Aldolase superfamily protein
Chr4_+_160643 1.95 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr5_-_2993213 1.95 AT5G09650.1
PPa6
pyrophosphorylase 6
Chr3_+_20780175 1.95 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
Chr5_-_5310951 1.94 AT5G16250.1
AT5G16250
transmembrane protein
Chr5_-_21068327 1.94 AT5G51820.1
PGM
phosphoglucomutase
Chr1_+_898480 1.92 AT1G03600.1
PSB27
photosystem II family protein
Chr1_-_1349478 1.92 AT1G04800.1
AT1G04800
glycine-rich protein
Chr1_-_6278150 1.91 AT1G18250.2
AT1G18250.1
ATLP-1
Pathogenesis-related thaumatin superfamily protein
Chr1_-_28581315 1.91 AT1G76160.1
sks5
SKU5 similar 5
Chr3_+_18973126 1.91 AT3G51080.1
GATA6
GATA transcription factor 6
Chr1_+_7696427 1.90 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
Chr1_+_3664187 1.90 AT1G10960.1
FD1
ferredoxin 1
Chr5_+_1952505 1.89 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
Chr4_-_16806830 1.88 AT4G35320.1
AT4G35320
hypothetical protein
Chr4_-_13958107 1.88 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_23328789 1.87 AT3G63140.1
CSP41A
chloroplast stem-loop binding protein of 41 kDa
Chr2_+_15445294 1.85 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr1_+_9534488 1.85 AT1G27460.2
AT1G27460.1
AT1G27460.3
NPGR1
no pollen germination related 1
Chr3_+_8194606 1.83 AT3G23050.1
AT3G23050.3
AT3G23050.2
IAA7
indole-3-acetic acid 7
Chr3_-_6818329 1.83 AT3G19620.1
AT3G19620
Glycosyl hydrolase family protein
Chr1_-_4365414 1.83 AT1G12800.1
AT1G12800
Nucleic acid-binding, OB-fold-like protein
Chr3_-_19791695 1.83 AT3G53380.1
AT3G53380
Concanavalin A-like lectin protein kinase family protein
Chr1_-_30041952 1.83 AT1G79850.1
RPS17
ribosomal protein S17
Chr3_+_1727151 1.82 AT3G05800.1
AIF1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
Chr3_-_22256177 1.81 AT3G60220.1
ATL4
TOXICOS EN LEVADURA 4
Chr1_-_30129649 1.81 AT1G80080.1
TMM
Leucine-rich repeat (LRR) family protein
Chr5_-_4061950 1.81 AT5G12860.2
DiT1
dicarboxylate transporter 1
Chr4_-_14439723 1.80 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
Chr2_+_2322215 1.80 AT2G05990.1
AT2G05990.2
MOD1
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_-_4062289 1.80 AT5G12860.1
DiT1
dicarboxylate transporter 1
Chr3_+_6105908 1.79 AT3G17840.1
RLK902
receptor-like kinase 902
Chr3_+_6752422 1.77 AT3G19480.1
AT3G19480
D-3-phosphoglycerate dehydrogenase
Chr2_+_17527167 1.76 AT2G41990.1
AT2G41990
late embryogenesis abundant protein
Chr1_+_28078852 1.76 AT1G74730.1
AT1G74730
transmembrane protein, putative (DUF1118)
Chr5_+_5820969 1.75 AT5G17670.1
AT5G17670
alpha/beta-Hydrolases superfamily protein
Chr3_+_188321 1.75 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr4_+_11128941 1.74 AT4G20760.2
AT4G20760.1
AT4G20760
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_564018 1.74 AT1G02640.1
BXL2
beta-xylosidase 2
Chr1_-_26538437 1.73 AT1G70410.2
BCA4
beta carbonic anhydrase 4
Chr5_+_18537239 1.73 AT5G45700.1
AT5G45700
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_+_12376122 1.72 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
Chr4_+_9803624 1.72 AT4G17600.1
LIL3:1
Chlorophyll A-B binding family protein
Chr2_+_13647699 1.72 AT2G32100.1
OFP16
ovate family protein 16
Chr3_+_18514266 1.71 AT3G49940.1
LBD38
LOB domain-containing protein 38
Chr2_+_16869189 1.71 AT2G40400.1
AT2G40400.2
AT2G40400.3
AT2G40400
DUF399 family protein, putative (DUF399 and DUF3411)
Chr1_-_3518035 1.71 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr5_+_23077120 1.71 AT5G57030.1
LUT2
Lycopene beta/epsilon cyclase protein
Chr1_-_18690503 1.70 AT1G50450.1
AT1G50450
Saccharopine dehydrogenase
Chr5_+_6387341 1.70 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr3_-_9342223 1.69 AT3G25660.1
AT3G25660
Amidase family protein
Chr3_-_2407634 1.68 AT3G07540.1
AT3G07540
Actin-binding FH2 (formin homology 2) family protein
Chr3_-_2130451 1.68 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr1_-_26537422 1.68 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
Chr2_+_19521774 1.67 AT2G47590.1
PHR2
photolyase/blue-light receptor 2
Chr1_+_2263037 1.66 AT1G07370.1
PCNA1
proliferating cellular nuclear antigen 1
Chr1_+_1191519 1.66 AT1G04420.1
AT1G04420
NAD(P)-linked oxidoreductase superfamily protein
Chr4_+_7758275 1.66 AT4G13340.1
LRX3
Leucine-rich repeat (LRR) family protein
Chr1_+_19454798 1.65 AT1G52230.1
PSAH2
photosystem I subunit H2
Chr1_-_8940613 1.65 AT1G25450.1
KCS5
3-ketoacyl-CoA synthase 5
Chr3_-_2944457 1.65 AT3G09580.1
AT3G09580
FAD/NAD(P)-binding oxidoreductase family protein
Chr2_-_13864596 1.65 AT2G32690.2
AT2G32690.3
AT2G32690.5
AT2G32690.4
AT2G32690.1
GRP23
glycine-rich protein 23
Chr5_+_7394443 1.63 AT5G22340.1
AT5G22340.2
AT5G22340
NF-kappa-B inhibitor-like protein
Chr2_-_7768040 1.63 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
Chr4_-_13496738 1.63 AT4G26830.1
AT4G26830.2
AT4G26830
O-Glycosyl hydrolases family 17 protein
Chr1_+_25374072 1.61 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
Chr1_+_4899045 1.61 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
Chr1_-_26327965 1.60 AT1G69900.1
AT1G69900
Actin cross-linking protein
Chr3_+_8624636 1.60 AT3G23890.1
AT3G23890.2
TOPII
topoisomerase II
Chr1_+_26220190 1.60 AT1G69700.1
HVA22C
HVA22 homologue C
Chr1_+_5489145 1.60 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
Chr5_-_26129547 1.59 AT5G65390.1
AGP7
arabinogalactan protein 7
Chr1_+_4839801 1.59 AT1G14150.1
AT1G14150.2
PnsL2
PsbQ-like 2
Chr3_-_19747114 1.59 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
Chr1_-_9458176 1.58 AT1G27210.1
AT1G27210
ARM repeat superfamily protein
Chr1_+_1136078 1.58 AT1G04250.1
AXR3
AUX/IAA transcriptional regulator family protein
Chr1_+_21028137 1.58 AT1G56190.1
AT1G56190.2
AT1G56190
Phosphoglycerate kinase family protein
Chr4_-_7591259 1.58 AT4G12980.1
AT4G12980
Auxin-responsive family protein
Chr1_+_29117500 1.58 AT1G77490.1
AT1G77490.2
TAPX
thylakoidal ascorbate peroxidase
Chr1_-_8235019 1.57 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_1169034 1.57 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
Chr4_-_947075 1.57 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr1_-_3272110 1.57 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
Chr4_+_12876822 1.57 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
Chr5_-_3709403 1.56 AT5G11550.1
AT5G11550
ARM repeat superfamily protein
Chr4_+_8470179 1.56 AT4G14750.2
AT4G14750.3
AT4G14750.1
IQD19
IQ-domain 19
Chr3_+_20016837 1.54 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
Chr1_-_4217412 1.54 AT1G12380.1
AT1G12380
hypothetical protein
Chr2_-_15185314 1.54 AT2G36200.2
AT2G36200.1
AT2G36200
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_5469594 1.54 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr3_-_1855063 1.54 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
Chr3_-_20257916 1.53 AT3G54720.1
AMP1
Peptidase M28 family protein
Chr2_+_18253610 1.53 AT2G44130.1
AT2G44130
Galactose oxidase/kelch repeat superfamily protein
Chr3_+_6180621 1.53 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr5_-_24728244 1.53 AT5G61480.1
PXY
Leucine-rich repeat protein kinase family protein
Chr1_+_176141 1.53 AT1G01480.2
ACS2
1-amino-cyclopropane-1-carboxylate synthase 2
Chr5_+_25191860 1.52 AT5G62720.2
AT5G62720
Integral membrane HPP family protein
Chr2_-_5051613 1.52 AT2G12462.1
AT2G12462
sterile alpha motif (SAM) domain protein
Chr1_+_18351324 1.52 AT1G49580.1
AT1G49580
Calcium-dependent protein kinase (CDPK) family protein
Chr2_+_19469571 1.52 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_22337791 1.51 AT3G60440.1
AT3G60440.2
AT3G60440
Phosphoglycerate mutase family protein
Chr3_+_21419449 1.51 AT3G57830.1
AT3G57830.2
AT3G57830.3
AT3G57830
Leucine-rich repeat protein kinase family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G15210

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 3.7 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
1.0 19.7 GO:0006949 syncytium formation(GO:0006949)
0.9 3.8 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.9 2.7 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.8 0.8 GO:0009915 phloem sucrose loading(GO:0009915)
0.7 3.5 GO:0042549 photosystem II stabilization(GO:0042549)
0.7 2.1 GO:0010198 synergid death(GO:0010198)
0.7 0.7 GO:0060919 auxin influx(GO:0060919)
0.7 2.0 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.6 1.9 GO:0009590 detection of gravity(GO:0009590)
0.6 3.7 GO:0006272 leading strand elongation(GO:0006272)
0.6 2.5 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.6 1.2 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.6 3.0 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.6 3.5 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.6 2.2 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.5 1.6 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.5 3.2 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.5 1.0 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.5 1.0 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.5 1.9 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.5 1.4 GO:0051341 protein heterooligomerization(GO:0051291) regulation of oxidoreductase activity(GO:0051341)
0.5 2.3 GO:0019401 alditol biosynthetic process(GO:0019401)
0.4 3.1 GO:0009099 valine biosynthetic process(GO:0009099)
0.4 0.9 GO:0009097 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.4 1.3 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.4 0.4 GO:0046717 acid secretion(GO:0046717)
0.4 1.2 GO:0043471 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.4 4.0 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.4 0.4 GO:0050993 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.4 2.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.4 1.9 GO:0010422 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.4 10.1 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.4 2.2 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.4 1.1 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.4 1.8 GO:0010376 stomatal complex formation(GO:0010376)
0.4 1.4 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.3 1.0 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.3 1.0 GO:0019354 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.3 1.0 GO:0080051 cutin transport(GO:0080051)
0.3 3.3 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.3 4.6 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.3 4.2 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.3 1.9 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.3 3.8 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.3 0.9 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.3 2.8 GO:0010047 fruit dehiscence(GO:0010047)
0.3 1.9 GO:0000719 photoreactive repair(GO:0000719)
0.3 5.6 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.3 2.2 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.3 1.2 GO:0051455 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.3 1.5 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.3 2.1 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.3 1.5 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.3 6.0 GO:0010207 photosystem II assembly(GO:0010207)
0.3 2.5 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.3 9.8 GO:0042335 cuticle development(GO:0042335)
0.3 3.6 GO:0032544 plastid translation(GO:0032544)
0.3 1.1 GO:0048462 carpel formation(GO:0048462)
0.3 1.1 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.3 0.8 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.3 3.4 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.3 0.8 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.3 3.8 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.3 1.5 GO:0051098 regulation of binding(GO:0051098)
0.2 0.7 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.2 1.9 GO:0016045 detection of bacterium(GO:0016045)
0.2 1.7 GO:0016120 carotene biosynthetic process(GO:0016120)
0.2 1.2 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.2 1.2 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.2 2.2 GO:0033206 meiotic cytokinesis(GO:0033206)
0.2 0.7 GO:0007349 cellularization(GO:0007349)
0.2 0.5 GO:0090615 mitochondrial mRNA processing(GO:0090615)
0.2 1.9 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.2 2.6 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.2 0.5 GO:0048445 carpel morphogenesis(GO:0048445)
0.2 1.2 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.2 0.9 GO:0071313 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.2 0.7 GO:0009660 amyloplast organization(GO:0009660)
0.2 0.7 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 1.5 GO:0010067 procambium histogenesis(GO:0010067)
0.2 1.3 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.2 0.6 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.2 2.0 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 0.6 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.2 3.4 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.2 4.5 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.2 1.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 1.0 GO:1903426 regulation of reactive oxygen species biosynthetic process(GO:1903426)
0.2 0.8 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.2 0.6 GO:0010541 acropetal auxin transport(GO:0010541)
0.2 1.0 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.2 1.0 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.2 1.0 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.2 4.4 GO:0045492 xylan biosynthetic process(GO:0045492)
0.2 1.0 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 4.2 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.2 1.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.2 0.7 GO:0034389 lipid particle organization(GO:0034389)
0.2 0.7 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.2 0.7 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.2 1.8 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.2 1.8 GO:0033619 membrane protein proteolysis(GO:0033619)
0.2 0.9 GO:0090059 protoxylem development(GO:0090059)
0.2 0.9 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.2 1.7 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.2 1.0 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.2 0.8 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.2 0.5 GO:0045828 positive regulation of isoprenoid metabolic process(GO:0045828) positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.2 0.3 GO:0010959 regulation of metal ion transport(GO:0010959)
0.2 0.8 GO:0046622 positive regulation of organ growth(GO:0046622)
0.2 1.2 GO:0080117 secondary growth(GO:0080117)
0.2 0.7 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.2 0.5 GO:0030638 polyketide metabolic process(GO:0030638)
0.2 1.8 GO:0009098 leucine biosynthetic process(GO:0009098)
0.2 13.8 GO:0045490 pectin catabolic process(GO:0045490)
0.2 2.1 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.2 0.8 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.2 3.0 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.2 0.8 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.2 3.5 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.2 2.3 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.9 GO:0010731 protein glutathionylation(GO:0010731)
0.1 2.4 GO:0010315 auxin efflux(GO:0010315)
0.1 0.6 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 1.0 GO:1901959 regulation of cutin biosynthetic process(GO:1901957) positive regulation of cutin biosynthetic process(GO:1901959)
0.1 2.0 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.1 1.8 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.1 0.4 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 2.6 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.8 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.4 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.1 0.7 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.1 0.3 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.1 1.1 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.1 0.5 GO:0000012 single strand break repair(GO:0000012)
0.1 0.5 GO:0071836 nectar secretion(GO:0071836)
0.1 0.7 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 0.4 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 1.1 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.1 1.1 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 0.5 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 3.6 GO:0006284 base-excision repair(GO:0006284)
0.1 0.6 GO:0010226 response to lithium ion(GO:0010226)
0.1 4.2 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.7 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.6 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.1 0.4 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.2 GO:0090355 positive regulation of hormone metabolic process(GO:0032352) positive regulation of auxin metabolic process(GO:0090355)
0.1 0.5 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 1.9 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 0.4 GO:0043467 regulation of generation of precursor metabolites and energy(GO:0043467)
0.1 1.4 GO:0080086 stamen filament development(GO:0080086)
0.1 1.8 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.5 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.7 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.1 0.3 GO:0055064 chloride ion homeostasis(GO:0055064)
0.1 0.8 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.1 4.3 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.1 4.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.3 GO:0015713 phosphoglycerate transport(GO:0015713) phosphoenolpyruvate transport(GO:0015714) aldonate transport(GO:0042873)
0.1 0.9 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.3 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.5 GO:0071732 cellular response to nitric oxide(GO:0071732)
0.1 0.8 GO:0006546 glycine catabolic process(GO:0006546) glycine decarboxylation via glycine cleavage system(GO:0019464)
0.1 0.4 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.5 GO:0048830 adventitious root development(GO:0048830)
0.1 1.2 GO:0016559 peroxisome fission(GO:0016559)
0.1 0.6 GO:0006013 mannose metabolic process(GO:0006013)
0.1 1.0 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.1 0.6 GO:0031110 regulation of microtubule polymerization or depolymerization(GO:0031110)
0.1 0.4 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.8 GO:1901656 glycoside transport(GO:1901656)
0.1 5.4 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 1.2 GO:0048564 photosystem I assembly(GO:0048564)
0.1 1.9 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.1 0.5 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 0.3 GO:0048255 mRNA stabilization(GO:0048255)
0.1 4.2 GO:0016485 protein processing(GO:0016485)
0.1 1.4 GO:0009299 mRNA transcription(GO:0009299)
0.1 3.0 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.7 GO:0046855 phosphorylated carbohydrate dephosphorylation(GO:0046838) inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.1 1.1 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.1 2.6 GO:0030050 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.1 0.5 GO:0090057 root radial pattern formation(GO:0090057)
0.1 0.4 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.1 0.2 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 2.3 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 0.9 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 0.3 GO:0048533 sporocyte differentiation(GO:0048533)
0.1 1.9 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 0.3 GO:0030104 water homeostasis(GO:0030104)
0.1 0.8 GO:0010358 leaf shaping(GO:0010358)
0.1 0.1 GO:0071731 response to nitric oxide(GO:0071731)
0.1 0.3 GO:0043132 NAD transport(GO:0043132)
0.1 3.5 GO:0048825 cotyledon development(GO:0048825)
0.1 1.6 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.1 1.7 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.1 1.4 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 0.7 GO:0045840 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.1 1.0 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.3 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 0.1 GO:0007097 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 0.4 GO:2000014 regulation of endosperm development(GO:2000014)
0.1 0.5 GO:0040001 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 1.6 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.8 GO:0048598 embryonic morphogenesis(GO:0048598)
0.1 1.1 GO:0048829 root cap development(GO:0048829)
0.1 0.7 GO:0045927 positive regulation of growth(GO:0045927)
0.1 0.4 GO:0034059 response to anoxia(GO:0034059)
0.1 1.2 GO:0010215 cellulose microfibril organization(GO:0010215)
0.1 1.0 GO:0010274 hydrotropism(GO:0010274)
0.1 0.7 GO:0009089 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.1 0.3 GO:0048479 style development(GO:0048479)
0.1 1.4 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.1 1.6 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 2.5 GO:0043622 cortical microtubule organization(GO:0043622)
0.1 0.4 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.1 1.2 GO:2001057 reactive nitrogen species metabolic process(GO:2001057)
0.1 1.3 GO:0009556 microsporogenesis(GO:0009556)
0.1 1.4 GO:0010166 wax metabolic process(GO:0010166)
0.1 2.0 GO:0010927 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.1 1.2 GO:0010152 pollen maturation(GO:0010152)
0.1 0.4 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.1 1.5 GO:0009958 positive gravitropism(GO:0009958)
0.1 0.8 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.1 4.9 GO:0015979 photosynthesis(GO:0015979)
0.1 3.7 GO:0007267 cell-cell signaling(GO:0007267)
0.1 1.5 GO:0010074 maintenance of meristem identity(GO:0010074)
0.1 1.1 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.1 0.4 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.1 0.8 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.1 2.0 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.1 0.2 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 0.9 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 0.3 GO:0019419 sulfate reduction(GO:0019419)
0.1 1.3 GO:0048768 root hair cell tip growth(GO:0048768)
0.1 0.3 GO:0097437 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.1 2.0 GO:0051225 spindle assembly(GO:0051225)
0.1 0.2 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 0.6 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 1.8 GO:0009630 gravitropism(GO:0009630)
0.1 0.5 GO:0010199 formation of organ boundary(GO:0010160) organ boundary specification between lateral organs and the meristem(GO:0010199) formation of anatomical boundary(GO:0048859)
0.1 2.0 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.1 3.1 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.2 GO:0048451 petal formation(GO:0048451)
0.1 0.5 GO:0048766 root hair initiation(GO:0048766)
0.1 0.2 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 0.4 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.1 1.3 GO:0006935 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.1 0.7 GO:0015766 disaccharide transport(GO:0015766) sucrose transport(GO:0015770)
0.1 0.3 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.1 0.3 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 0.7 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.7 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.3 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.0 1.1 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.2 GO:0046519 sphingoid metabolic process(GO:0046519)
0.0 0.4 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.6 GO:0010449 root meristem growth(GO:0010449)
0.0 0.2 GO:0019985 translesion synthesis(GO:0019985)
0.0 0.4 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.8 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 3.9 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.9 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.4 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.4 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.3 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.6 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.6 GO:0030865 cortical cytoskeleton organization(GO:0030865)
0.0 0.6 GO:0080022 primary root development(GO:0080022)
0.0 2.2 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.7 GO:0009269 response to desiccation(GO:0009269)
0.0 0.4 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 0.4 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.0 1.2 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.1 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.0 0.2 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.3 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.6 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.5 GO:0006621 protein retention in ER lumen(GO:0006621) maintenance of protein localization in endoplasmic reticulum(GO:0035437) cytoplasmic sequestering of protein(GO:0051220) maintenance of protein localization in organelle(GO:0072595)
0.0 0.8 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 0.6 GO:0006270 DNA replication initiation(GO:0006270)
0.0 1.7 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.2 GO:0009819 drought recovery(GO:0009819)
0.0 0.7 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.1 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.0 0.4 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.3 GO:0051552 flavone metabolic process(GO:0051552) flavone biosynthetic process(GO:0051553) flavonol metabolic process(GO:0051554) flavonol biosynthetic process(GO:0051555)
0.0 0.5 GO:0009306 protein secretion(GO:0009306)
0.0 0.7 GO:0046839 phospholipid dephosphorylation(GO:0046839) phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.3 GO:0048658 anther wall tapetum development(GO:0048658)
0.0 0.3 GO:0044030 regulation of DNA methylation(GO:0044030)
0.0 0.3 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.0 0.2 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.4 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.5 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.2 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.0 0.2 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.3 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.7 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.2 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.3 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.8 GO:0046351 disaccharide biosynthetic process(GO:0046351)
0.0 0.4 GO:0010051 xylem and phloem pattern formation(GO:0010051)
0.0 0.1 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.0 0.2 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.4 GO:0034394 protein localization to cell surface(GO:0034394) regulation of protein localization to cell surface(GO:2000008)
0.0 0.0 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.0 0.2 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.6 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413) peptidyl-proline modification(GO:0018208)
0.0 0.3 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.1 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.0 0.5 GO:0010311 lateral root formation(GO:0010311)
0.0 0.1 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.0 0.6 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0 0.2 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.0 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.0 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.1 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.3 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.1 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.7 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.2 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.7 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.1 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.1 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.0 0.1 GO:0032508 DNA geometric change(GO:0032392) DNA duplex unwinding(GO:0032508)
0.0 0.1 GO:0006308 DNA catabolic process(GO:0006308)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 6.6 GO:0009538 photosystem I reaction center(GO:0009538)
0.7 2.8 GO:0070505 pollen coat(GO:0070505)
0.5 2.0 GO:0016461 unconventional myosin complex(GO:0016461)
0.5 1.4 GO:0044420 extracellular matrix component(GO:0044420)
0.4 1.3 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.4 1.6 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.4 1.1 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.3 1.6 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.3 7.0 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.3 0.8 GO:0031897 Tic complex(GO:0031897)
0.3 0.8 GO:0005652 nuclear lamina(GO:0005652)
0.3 2.5 GO:0031012 extracellular matrix(GO:0031012)
0.2 0.2 GO:0031356 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.2 3.1 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.2 0.9 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.2 1.1 GO:0009897 external side of plasma membrane(GO:0009897)
0.2 8.9 GO:0010319 stromule(GO:0010319)
0.2 2.0 GO:0042555 MCM complex(GO:0042555)
0.2 1.8 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.2 29.2 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.2 0.7 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.2 1.2 GO:0030892 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 0.5 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.2 1.3 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.2 2.3 GO:0005880 nuclear microtubule(GO:0005880)
0.2 19.4 GO:0031225 anchored component of membrane(GO:0031225)
0.2 0.8 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.2 0.8 GO:0005960 glycine cleavage complex(GO:0005960)
0.1 62.6 GO:0009579 thylakoid(GO:0009579)
0.1 2.5 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.9 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.1 0.7 GO:0072686 mitotic spindle(GO:0072686)
0.1 0.9 GO:0005884 actin filament(GO:0005884)
0.1 2.1 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.1 0.8 GO:0030139 endocytic vesicle(GO:0030139)
0.1 1.7 GO:0055028 cortical microtubule(GO:0055028)
0.1 2.3 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.1 0.3 GO:0009501 amyloplast(GO:0009501)
0.1 0.6 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 0.8 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 2.3 GO:0005680 anaphase-promoting complex(GO:0005680)
0.1 0.5 GO:0044545 NSL complex(GO:0044545)
0.1 0.9 GO:0009986 cell surface(GO:0009986)
0.1 0.4 GO:0030863 cortical cytoskeleton(GO:0030863)
0.1 1.7 GO:0005871 kinesin complex(GO:0005871)
0.1 0.6 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 12.6 GO:0009505 plant-type cell wall(GO:0009505)
0.1 4.0 GO:0099512 microtubule(GO:0005874) supramolecular fiber(GO:0099512) polymeric cytoskeletal fiber(GO:0099513)
0.1 0.6 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 16.8 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.1 1.0 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 1.3 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 0.7 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.4 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.6 GO:0016459 myosin complex(GO:0016459)
0.0 0.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.2 GO:0000796 condensin complex(GO:0000796)
0.0 0.2 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 13.9 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.4 GO:0000229 cytoplasmic chromosome(GO:0000229) plastid chromosome(GO:0009508)
0.0 73.5 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.1 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.1 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 0.7 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.3 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.2 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.3 GO:0005811 lipid particle(GO:0005811)
0.0 3.8 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.2 GO:0005657 replication fork(GO:0005657)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.1 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.9 2.7 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.9 3.5 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.7 3.6 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.7 2.2 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.7 3.5 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.7 2.1 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.6 4.5 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.6 1.7 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.5 1.6 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.5 3.2 GO:0004126 cytidine deaminase activity(GO:0004126)
0.5 2.0 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.5 1.9 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.4 2.2 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.4 2.2 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.4 2.4 GO:0045431 flavonol synthase activity(GO:0045431)
0.4 3.2 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.4 1.6 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.4 0.4 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.4 1.9 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.4 1.5 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.4 1.2 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.4 1.1 GO:0010242 oxygen evolving activity(GO:0010242)
0.3 1.0 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.3 2.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.3 1.4 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.3 1.0 GO:0016842 amidine-lyase activity(GO:0016842)
0.3 4.9 GO:0004312 fatty acid synthase activity(GO:0004312)
0.3 1.9 GO:0003913 DNA photolyase activity(GO:0003913)
0.3 1.5 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.3 0.9 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.3 4.0 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.3 1.4 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.3 1.9 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.3 3.0 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.3 3.0 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.3 1.3 GO:0004127 cytidylate kinase activity(GO:0004127)
0.3 1.6 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.3 1.3 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.3 1.8 GO:0008169 C-methyltransferase activity(GO:0008169)
0.3 1.0 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.3 0.8 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.3 0.8 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.2 5.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.2 0.7 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.2 1.0 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.2 2.0 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 6.6 GO:0008266 poly(U) RNA binding(GO:0008266)
0.2 0.7 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 1.8 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.2 0.4 GO:0008061 chitin binding(GO:0008061)
0.2 1.6 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.2 0.9 GO:0004075 biotin carboxylase activity(GO:0004075)
0.2 1.9 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.2 1.7 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 0.9 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.2 0.9 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 1.5 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.2 0.6 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 1.0 GO:0004072 aspartate kinase activity(GO:0004072)
0.2 1.6 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 1.2 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.2 0.6 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.2 0.8 GO:0015245 fatty acid transporter activity(GO:0015245)
0.2 1.8 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.2 2.8 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.2 0.8 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.2 0.8 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.2 5.7 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 4.8 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 1.0 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.2 1.2 GO:0031177 phosphopantetheine binding(GO:0031177)
0.2 1.7 GO:0008131 primary amine oxidase activity(GO:0008131)
0.2 1.7 GO:0043495 protein anchor(GO:0043495)
0.2 0.8 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.2 0.7 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.2 2.8 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.2 0.9 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.2 12.1 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.2 2.0 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.2 1.8 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.2 0.4 GO:0016841 ammonia-lyase activity(GO:0016841)
0.2 4.9 GO:0008810 cellulase activity(GO:0008810)
0.2 3.7 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.2 11.3 GO:0004650 polygalacturonase activity(GO:0004650)
0.2 1.4 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2 1.4 GO:0005536 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.2 0.3 GO:0003777 microtubule motor activity(GO:0003777)
0.2 0.8 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.2 2.4 GO:0003688 DNA replication origin binding(GO:0003688)
0.2 1.6 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.2 4.1 GO:0016168 chlorophyll binding(GO:0016168)
0.2 0.2 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.2 0.6 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.2 1.5 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.1 0.4 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 2.0 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 1.1 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 1.1 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 5.7 GO:0045735 nutrient reservoir activity(GO:0045735)
0.1 1.4 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.4 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 1.8 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 1.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 0.4 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726) oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.4 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.1 0.4 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.1 1.1 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.1 1.6 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 0.5 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 1.0 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.5 GO:0016531 copper chaperone activity(GO:0016531)
0.1 0.5 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.1 0.3 GO:0015377 cation:chloride symporter activity(GO:0015377)
0.1 0.8 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 1.0 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 2.7 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 2.0 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.1 3.4 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 1.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.8 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 0.4 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 1.3 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 0.7 GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity(GO:0008441)
0.1 1.7 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.1 3.8 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.1 0.5 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 1.4 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.1 3.3 GO:0005179 hormone activity(GO:0005179)
0.1 1.1 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 9.9 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.1 1.1 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.1 1.0 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.1 1.8 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.6 GO:0015108 chloride transmembrane transporter activity(GO:0015108)
0.1 2.6 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 1.4 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 1.1 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 3.0 GO:0051087 chaperone binding(GO:0051087)
0.1 1.9 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.3 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 0.4 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 0.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 10.9 GO:0008017 microtubule binding(GO:0008017)
0.1 0.6 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.1 0.4 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 1.4 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 1.1 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 1.0 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 0.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.2 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.1 2.8 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 1.3 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 0.3 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.2 GO:0035671 enone reductase activity(GO:0035671)
0.1 2.7 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.1 0.3 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.4 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.1 0.8 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 2.6 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 0.9 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.1 2.6 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 0.7 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.8 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.2 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 0.2 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.1 0.7 GO:0002020 protease binding(GO:0002020)
0.1 0.2 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.1 0.3 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.1 0.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 1.0 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.2 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.2 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 0.6 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 0.7 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.1 0.4 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 0.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.3 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 0.4 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.0 0.4 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 1.0 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.3 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.0 0.3 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 0.2 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.0 0.9 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 1.5 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 1.0 GO:0034061 DNA polymerase activity(GO:0034061)
0.0 0.2 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 0.3 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 0.6 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.2 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.4 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.1 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 0.1 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.0 0.1 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.0 0.1 GO:0052736 beta-glucanase activity(GO:0052736)
0.0 0.4 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.1 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.0 1.0 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.8 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.1 GO:0070704 sterol desaturase activity(GO:0070704)
0.0 0.4 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 2.9 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.2 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.5 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.4 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.0 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.1 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.0 0.1 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.2 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 2.7 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.1 GO:0032138 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.0 1.3 GO:0004180 carboxypeptidase activity(GO:0004180)
0.0 0.9 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 4.2 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.5 GO:0031490 chromatin DNA binding(GO:0031490)
0.0 0.5 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.2 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 5.0 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.1 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.3 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 3.2 GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds(GO:0004553)
0.0 2.0 GO:0005507 copper ion binding(GO:0005507)
0.0 0.2 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.1 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.2 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 3.9 GO:0042802 identical protein binding(GO:0042802)
0.0 0.3 GO:0009975 cyclase activity(GO:0009975)
0.0 0.1 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.1 GO:0004806 triglyceride lipase activity(GO:0004806)
0.0 0.0 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.6 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.4 1.5 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.3 1.7 PID AP1 PATHWAY AP-1 transcription factor network
0.3 1.1 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.2 2.6 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 0.7 PID CASPASE PATHWAY Caspase cascade in apoptosis
0.1 0.1 PID MYC PATHWAY C-MYC pathway
0.1 0.3 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.9 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.1 0.6 PID ATR PATHWAY ATR signaling pathway
0.0 0.1 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.3 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.1 PID CMYB PATHWAY C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.3 1.2 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.3 2.0 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 1.2 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.2 1.9 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.2 1.2 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.2 0.6 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.2 1.2 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.2 1.6 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.2 0.5 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 0.4 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 0.6 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 0.3 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.8 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 0.3 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 1.2 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 1.3 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.1 0.2 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.2 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 0.3 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.5 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis