Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT2G47270

Z-value: 2.16

Transcription factors associated with AT2G47270

Gene Symbol Gene ID Gene Info
AT2G47270
AT2G47270 transcription factor UPBEAT protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
UPB1arTal_v1_Chr2_-_19412328_194123280.973.1e-17Click!

Activity profile of AT2G47270 motif

Sorted Z-values of AT2G47270 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_20387058 22.75 AT1G54575.1
AT1G54575
hypothetical protein
Chr1_+_20386809 21.88 AT1G54575.2
AT1G54575
hypothetical protein
Chr4_-_9201643 19.47 AT4G16260.2
AT4G16260.1
AT4G16260
Glycosyl hydrolase superfamily protein
Chr1_-_20385380 14.88 AT1G54570.1
PES1
Esterase/lipase/thioesterase family protein
Chr3_-_1063103 14.08 AT3G04070.2
AT3G04070.1
NAC047
NAC domain containing protein 47
Chr5_-_9247540 13.63 AT5G26340.1
MSS1
Major facilitator superfamily protein
Chr5_-_17994584 10.86 AT5G44610.3
AT5G44610.2
AT5G44610.1
MAP18
microtubule-associated protein 18
Chr4_-_14393381 10.13 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_-_16085213 10.08 AT5G40240.3
AT5G40240.1
UMAMIT40
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_7086873 10.01 AT1G20440.1
COR47
cold-regulated 47
Chr2_-_8091736 9.91 AT2G18660.1
PNP-A
plant natriuretic peptide A
Chr3_-_19165322 9.68 AT3G51660.1
AT3G51660
Tautomerase/MIF superfamily protein
Chr4_-_437591 9.53 AT4G01010.1
AT4G01010.2
CNGC13
cyclic nucleotide-gated channel 13
Chr3_-_17475274 9.38 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
Chr5_-_16084957 8.80 AT5G40240.2
UMAMIT40
nodulin MtN21 /EamA-like transporter family protein
Chr2_-_13657369 7.51 AT2G32140.1
AT2G32140
transmembrane receptor
Chr2_+_13658888 7.48 AT2G32150.1
AT2G32150.2
AT2G32150.3
AT2G32150
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr2_+_487398 6.76 AT2G02040.1
PTR2
peptide transporter 2
Chr2_+_18624264 6.51 AT2G45170.1
AT2G45170.2
ATG8E
AUTOPHAGY 8E
Chr1_+_26423874 6.43 AT1G70170.1
MMP
matrix metalloproteinase
Chr2_-_19332659 6.41 AT2G47050.1
AT2G47050
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_+_8094614 6.33 AT2G18680.1
AT2G18680
transmembrane protein
Chr1_+_10236337 6.23 AT1G29280.1
WRKY65
WRKY DNA-binding protein 65
Chr2_-_14310608 6.12 AT2G33830.2
AT2G33830
Dormancy/auxin associated family protein
Chr5_+_6802282 6.11 AT5G20150.1
SPX1
SPX domain-containing protein 1
Chr1_-_6812757 6.08 AT1G19700.3
AT1G19700.1
BEL10
BEL1-like homeodomain 10
Chr2_-_14310339 6.02 AT2G33830.1
AT2G33830
Dormancy/auxin associated family protein
Chr2_+_8293640 5.98 AT2G19130.1
AT2G19130
S-locus lectin protein kinase family protein
Chr1_-_6811994 5.86 AT1G19700.2
BEL10
BEL1-like homeodomain 10
Chr2_+_13662138 5.82 AT2G32160.4
AT2G32160.3
AT2G32160.1
AT2G32160.2
AT2G32160
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_8093220 5.76 AT2G18670.1
AT2G18670
RING/U-box superfamily protein
Chr1_-_6812523 5.67 AT1G19700.4
BEL10
BEL1-like homeodomain 10
Chr1_-_6813063 5.49 AT1G19700.5
BEL10
BEL1-like homeodomain 10
Chr3_-_4214530 5.47 AT3G13100.1
AT3G13100.2
ABCC7
multidrug resistance-associated protein 7
Chr2_+_7564240 5.16 AT2G17420.1
AT2G17420.2
NTRA
NADPH-dependent thioredoxin reductase A
Chr1_+_26419894 4.99 AT1G70160.1
AT1G70160
zinc finger MYND domain protein
Chr5_+_16675582 4.96 AT5G41700.5
AT5G41700.1
AT5G41700.3
AT5G41700.4
AT5G41700.2
UBC8
ubiquitin conjugating enzyme 8
Chr5_-_19172956 4.90 AT5G47220.1
ERF2
ethylene responsive element binding factor 2
Chr2_-_18801383 4.86 AT2G45640.1
AT2G45640.2
SAP18
SIN3 associated polypeptide P18
Chr1_-_21311428 4.84 AT1G57540.2
AT1G57540.3
AT1G57540.1
AT1G57540
40S ribosomal protein
Chr3_+_20695433 4.10 AT3G55740.1
AT3G55740.2
PROT2
proline transporter 2
Chr5_+_26003882 3.96 AT5G65090.1
AT5G65090.3
BST1
DNAse I-like superfamily protein
Chr3_+_4180355 3.96 AT3G13060.2
AT3G13060.5
AT3G13060.1
AT3G13060.6
ECT5
evolutionarily conserved C-terminal region 5
Chr5_-_8358546 3.95 AT5G24470.1
PRR5
two-component response regulator-like protein
Chr2_-_18620451 3.65 AT2G45160.1
HAM1
GRAS family transcription factor
Chr3_+_4180154 3.62 AT3G13060.3
AT3G13060.4
ECT5
evolutionarily conserved C-terminal region 5
Chr3_+_19569256 3.51 AT3G52800.1
AT3G52800.2
AT3G52800
A20/AN1-like zinc finger family protein
Chr5_+_18228768 3.38 AT5G45110.1
AT5G45110.2
NPR3
NPR1-like protein 3
Chr1_+_7090941 3.25 AT1G20460.1
AT1G20460
NADH-ubiquinone oxidoreductase chain
Chr3_+_20695930 3.14 AT3G55740.3
PROT2
proline transporter 2
Chr4_+_438991 3.12 AT4G01020.1
AT4G01020
helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein
Chr2_+_801527 2.96 AT2G02810.1
UTR1
UDP-galactose transporter 1
Chr5_+_22817480 2.94 AT5G56340.1
ATCRT1
RING/U-box superfamily protein
Chr4_+_10375244 2.88 AT4G18950.1
AT4G18950.2
AT4G18950
Integrin-linked protein kinase family
Chr5_+_26004683 2.74 AT5G65090.2
BST1
DNAse I-like superfamily protein
Chr1_-_8727212 2.62 AT1G24625.1
ZFP7
zinc finger protein 7
Chr3_-_4216302 2.59 AT3G13110.1
SERAT2%3B2
serine acetyltransferase 2;2
Chr5_-_1267416 2.49 AT5G04470.1
SIM
cyclin-dependent protein kinase inhibitor
Chr5_+_3052062 2.40 AT5G09810.1
ACT7
actin 7
Chr3_-_7709933 2.32 AT3G21890.1
BBX31
B-box type zinc finger family protein
Chr5_+_3144200 2.24 AT5G10050.1
AT5G10050
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_677240 2.17 AT3G03000.1
AT3G03000
EF hand calcium-binding protein family
Chr2_+_859441 2.15 AT2G02955.1
MEE12
maternal effect embryo arrest 12
Chr4_+_2718170 2.11 AT4G05320.1
AT4G05320.5
AT4G05320.7
AT4G05320.8
AT4G05320.3
AT4G05320.4
UBQ10
polyubiquitin 10
Chr4_+_2717977 2.10 AT4G05320.2
AT4G05320.6
UBQ10
polyubiquitin 10
Chr1_+_26426269 1.71 AT1G70180.1
AT1G70180.3
AT1G70180.2
AT1G70180.4
AT1G70180.5
AT1G70180.6
AT1G70180
Sterile alpha motif (SAM) domain-containing protein
Chr1_-_1433010 1.57 AT1G05010.1
EFE
ethylene-forming enzyme
Chr1_+_25752624 1.39 AT1G68580.3
AT1G68580.4
AT1G68580.2
AT1G68580.5
AT1G68580.1
AT1G68580
Agenet and bromo-adjacent homology (BAH) domain-containing protein
Chr1_-_19956915 1.31 AT1G53460.1
AT1G53460
craniofacial development protein
Chr1_-_4766852 1.23 AT1G13940.1
AT1G13940.2
AT1G13940
T-box transcription factor, putative (DUF863)
Chr2_+_7568018 1.21 AT2G17430.1
MLO7
Seven transmembrane MLO family protein
Chr1_-_5614020 1.18 AT1G16420.1
MC8
metacaspase 8
Chr3_-_19566492 1.16 AT3G52790.1
AT3G52790
peptidoglycan-binding LysM domain-containing protein
Chr5_+_4904873 1.15 AT5G15130.2
WRKY72
WRKY DNA-binding protein 72
Chr2_+_15645407 1.12 AT2G37260.2
AT2G37260.3
TTG2
WRKY family transcription factor family protein
Chr2_+_19245591 1.10 AT2G46830.1
AT2G46830.2
CCA1
circadian clock associated 1
Chr2_+_19246681 1.08 AT2G46830.3
CCA1
circadian clock associated 1
Chr1_+_21316730 1.07 AT1G57560.2
AT1G57560.1
MYB50
myb domain protein 50
Chr4_+_9205080 1.04 AT4G16270.1
AT4G16270
peroxidase superfamily protein
Chr2_+_7558916 1.00 AT2G17410.1
AT2G17410.2
AT2G17410
ARID/BRIGHT DNA-binding domain-containing protein
Chr2_-_8292498 0.98 AT2G19120.1
AT2G19120
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_3140347 0.95 AT5G10030.4
AT5G10030.3
TGA4
TGACG motif-binding factor 4
Chr5_+_16677827 0.94 AT5G41710.1
AT5G41710

Chr2_-_799442 0.86 AT2G02800.2
AT2G02800.1
APK2B
protein kinase 2B
Chr2_+_7559215 0.83 AT2G17410.3
AT2G17410
ARID/BRIGHT DNA-binding domain-containing protein
Chr5_+_4904290 0.81 AT5G15130.1
WRKY72
WRKY DNA-binding protein 72
Chr1_+_3777236 0.76 AT1G11260.1
STP1
sugar transporter 1
Chr2_+_19336653 0.72 AT2G47070.1
AT2G47070.2
SPL1
squamosa promoter binding protein-like 1
Chr2_+_15644811 0.62 AT2G37260.1
TTG2
WRKY family transcription factor family protein
Chr5_-_3139624 0.53 AT5G10030.5
TGA4
TGACG motif-binding factor 4
Chr3_+_19168672 0.47 AT3G51670.1
AT3G51670
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr1_-_7083910 0.34 AT1G20430.1
AT1G20430
hypothetical protein
Chr2_+_8527175 0.26 AT2G19790.1
AT2G19790
SNARE-like superfamily protein
Chr5_-_1114681 0.21 AT5G04110.4
AT5G04110.3
GYRB3
DNA GYRASE B3
Chr3_+_2833346 0.16 AT3G09230.1
MYB1
myb domain protein 1
Chr5_-_3140509 0.11 AT5G10030.1
TGA4
TGACG motif-binding factor 4
Chr5_-_1115007 0.11 AT5G04110.2
AT5G04110.1
GYRB3
DNA GYRASE B3
Chr1_-_19954267 0.01 AT1G53450.1
AT1G53450.3
AT1G53450.2
AT1G53450
epstein-barr nuclear antigen

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G47270

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
6.5 19.5 GO:0002215 defense response to nematode(GO:0002215)
4.7 14.1 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
3.7 14.9 GO:0033306 phytol metabolic process(GO:0033306)
3.6 10.9 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
2.1 6.4 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
2.0 6.1 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
1.4 7.2 GO:0015824 proline transport(GO:0015824)
1.2 14.4 GO:0015749 monosaccharide transport(GO:0015749)
1.1 9.9 GO:0010230 alternative respiration(GO:0010230)
0.6 9.4 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.5 2.1 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.5 3.0 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.5 6.7 GO:0048766 root hair initiation(GO:0048766)
0.4 7.6 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.4 1.2 GO:0010483 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.4 2.2 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.3 4.9 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.3 5.2 GO:0071450 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.3 1.6 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.2 2.5 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.2 1.2 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.2 10.0 GO:0010286 heat acclimation(GO:0010286)
0.2 6.5 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.2 1.7 GO:0009957 epidermal cell fate specification(GO:0009957)
0.2 2.4 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.2 3.7 GO:0048768 root hair cell tip growth(GO:0048768)
0.1 5.0 GO:0009960 endosperm development(GO:0009960)
0.1 6.0 GO:0048544 recognition of pollen(GO:0048544)
0.1 4.0 GO:0051170 nuclear import(GO:0051170)
0.1 6.4 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.1 3.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 2.6 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.1 2.2 GO:0043269 regulation of ion transport(GO:0043269)
0.0 17.9 GO:0006357 regulation of transcription from RNA polymerase II promoter(GO:0006357)
0.0 3.5 GO:0010200 response to chitin(GO:0010200)
0.0 4.2 GO:0009751 response to salicylic acid(GO:0009751)
0.0 0.3 GO:0006265 DNA topological change(GO:0006265)
0.0 2.3 GO:0009909 regulation of flower development(GO:0009909)
0.0 1.1 GO:0010119 regulation of stomatal movement(GO:0010119)
0.0 4.9 GO:0009651 response to salt stress(GO:0009651)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 6.5 GO:0005776 autophagosome(GO:0005776)
0.3 6.4 GO:0031012 extracellular matrix(GO:0031012)
0.2 14.9 GO:0010287 plastoglobule(GO:0010287)
0.2 26.8 GO:0000790 nuclear chromatin(GO:0000790)
0.2 25.3 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 3.0 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 5.2 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 7.6 GO:0000325 plant-type vacuole(GO:0000325)
0.0 2.1 GO:0044452 nucleolar part(GO:0044452)
0.0 9.9 GO:0048046 apoplast(GO:0048046)
0.0 17.8 GO:0009506 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)
0.0 48.8 GO:0005576 extracellular region(GO:0005576)
0.0 4.9 GO:0005730 nucleolus(GO:0005730)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.7 13.6 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
1.2 7.2 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
1.1 14.9 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.9 19.5 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.7 5.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.6 3.0 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.5 10.9 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.5 3.7 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.4 6.7 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.4 2.2 GO:0019904 protein domain specific binding(GO:0019904)
0.3 2.1 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.3 2.5 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.2 5.5 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.2 4.2 GO:0031386 protein tag(GO:0031386)
0.2 22.5 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.2 2.3 GO:0030674 protein binding, bridging(GO:0030674)
0.1 6.4 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 1.6 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.1 4.0 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 5.0 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.1 2.4 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 3.4 GO:0033293 monocarboxylic acid binding(GO:0033293)
0.1 0.8 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 7.3 GO:0005216 ion channel activity(GO:0005216)
0.0 6.4 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 3.1 GO:0003724 RNA helicase activity(GO:0003724)
0.0 5.8 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.0 6.0 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.3 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 2.6 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 30.0 GO:0003700 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 2.9 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 1.2 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 2.2 GO:0005509 calcium ion binding(GO:0005509)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 4.9 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.6 4.0 PID MTOR 4PATHWAY mTOR signaling pathway