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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G45680

Z-value: 1.16

Transcription factors associated with AT2G45680

Gene Symbol Gene ID Gene Info
AT2G45680
AT2G45680 TCP family transcription factor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
TCP9arTal_v1_Chr2_-_18821889_18821889-0.891.8e-10Click!

Activity profile of AT2G45680 motif

Sorted Z-values of AT2G45680 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_13391293 8.34 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr4_+_13390754 7.91 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr2_-_17648945 7.06 AT2G42380.1
AT2G42380.4
AT2G42380.3
AT2G42380.2
AT2G42380.5
BZIP34
Basic-leucine zipper (bZIP) transcription factor family protein
Chr3_-_21523375 6.95 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein
Chr3_+_6510982 5.57 AT3G18890.1
Tic62
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_12870006 4.49 AT4G25050.2
AT4G25050.1
ACP4
acyl carrier protein 4
Chr1_+_3031046 4.04 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_4042075 3.92 AT3G12710.1
AT3G12710
DNA glycosylase superfamily protein
Chr1_-_1768837 3.45 AT1G05850.2
AT1G05850.1
POM1
Chitinase family protein
Chr1_-_6959148 3.42 AT1G20070.1
AT1G20070
hypothetical protein
Chr3_+_4510965 3.38 AT3G13750.1
BGAL1
beta galactosidase 1
Chr3_-_2137012 3.18 AT3G06770.1
AT3G06770.5
AT3G06770
Pectin lyase-like superfamily protein
Chr4_-_13406109 3.17 AT4G26555.2
AT4G26555.3
AT4G26555.1
AT4G26555
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Chr3_-_2137280 3.14 AT3G06770.4
AT3G06770.3
AT3G06770
Pectin lyase-like superfamily protein
Chr1_+_27778984 3.09 AT1G73870.1
BBX16
B-box type zinc finger protein with CCT domain-containing protein
Chr3_-_4775258 2.97 AT3G14310.1
PME3
pectin methylesterase 3
Chr5_+_25243405 2.85 AT5G62890.3
AT5G62890.1
AT5G62890
Xanthine/uracil permease family protein
Chr5_+_25243148 2.78 AT5G62890.2
AT5G62890.4
AT5G62890
Xanthine/uracil permease family protein
Chr4_-_13481870 2.46 AT4G26760.1
MAP65-2
microtubule-associated protein 65-2
Chr2_-_466724 2.45 AT2G01990.1
AT2G01990
XRI1-like protein
Chr2_-_466955 2.40 AT2G01990.2
AT2G01990
XRI1-like protein
Chr2_+_14830626 2.39 AT2G35190.1
NPSN11
Putative plant snare 11
Chr4_-_18472048 2.37 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr5_+_7676938 2.32 AT5G22940.2
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr2_-_19440355 2.31 AT2G47370.2
AT2G47370.1
AT2G47370
Calcium-dependent phosphotriesterase superfamily protein
Chr3_-_1858946 2.31 AT3G06140.1
LUL4
RING/U-box superfamily protein
Chr5_+_7676662 2.23 AT5G22940.1
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr4_-_12254275 2.20 AT4G23490.1
AT4G23490
fringe-like protein (DUF604)
Chr5_+_19549676 2.18 AT5G48220.3
AT5G48220.4
AT5G48220.2
AT5G48220.1
AT5G48220
Aldolase-type TIM barrel family protein
Chr3_-_2137641 2.17 AT3G06770.2
AT3G06770
Pectin lyase-like superfamily protein
Chr5_+_931762 2.14 AT5G03650.1
SBE2.2
starch branching enzyme 2.2
Chr2_-_2843338 2.09 AT2G06925.2
AT2G06925.1
PLA2-ALPHA
Phospholipase A2 family protein
Chr5_-_6591305 2.00 AT5G19530.1
AT5G19530.2
ACL5
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_6688463 1.98 AT1G19350.4
AT1G19350.3
AT1G19350.5
BES1
Brassinosteroid signaling positive regulator (BZR1) family protein
Chr1_+_23953099 1.90 AT1G64500.1
AT1G64500
Glutaredoxin family protein
Chr2_+_18718348 1.87 AT2G45420.1
LBD18
LOB domain-containing protein 18
Chr2_+_18490030 1.81 AT2G44830.3
AT2G44830
Protein kinase superfamily protein
Chr1_-_23013477 1.80 AT1G62290.5
AT1G62290.6
AT1G62290.1
AT1G62290.3
AT1G62290.4
AT1G62290.2
AT1G62290
Saposin-like aspartyl protease family protein
Chr2_+_18489875 1.78 AT2G44830.1
AT2G44830
Protein kinase superfamily protein
Chr3_-_2979389 1.75 AT3G09710.2
IQD1
IQ-domain 1
Chr4_-_18451293 1.74 AT4G39770.2
AT4G39770.1
TPPH
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_-_2979784 1.74 AT3G09710.1
IQD1
IQ-domain 1
Chr2_+_18489607 1.73 AT2G44830.2
AT2G44830
Protein kinase superfamily protein
Chr4_+_16993062 1.72 AT4G35880.1
AT4G35880.2
AT4G35880
Eukaryotic aspartyl protease family protein
Chr4_+_12589810 1.71 AT4G24280.1
cpHsc70-1
chloroplast heat shock protein 70-1
Chr5_+_3476820 1.67 AT5G10990.1
AT5G10990
SAUR-like auxin-responsive protein family
Chr5_+_25881033 1.61 AT5G64740.1
CESA6
cellulose synthase 6
Chr1_+_6688698 1.58 AT1G19350.1
AT1G19350.6
BES1
Brassinosteroid signaling positive regulator (BZR1) family protein
Chr5_+_26660311 1.53 AT5G66770.1
AT5G66770
GRAS family transcription factor
Chr2_-_257568 1.50 AT2G01570.1
RGA1
GRAS family transcription factor family protein
Chr5_+_4782909 1.48 AT5G14790.1
AT5G14790
ARM repeat superfamily protein
Chr5_+_25268950 1.45 AT5G62960.1
AT5G62960.2
AT5G62960
UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein
Chr3_-_11448609 1.42 AT3G29630.2
AT3G29630.1
AT3G29630
UDP-Glycosyltransferase superfamily protein
Chr5_-_11184514 1.35 AT5G29550.1
AT5G29550

Chr4_-_8711526 1.31 AT4G15250.1
BBX9
B-box type zinc finger protein with CCT domain-containing protein
Chr3_-_13524114 1.21 AT3G32975.1
AT3G32975

Chr5_+_5718498 1.18 AT5G17350.1
AT5G17350
hypothetical protein
Chr2_+_6763707 1.18 AT2G15500.1
AT2G15500
RNA-binding protein
Chr2_+_13515199 1.15 AT2G31780.1
ARI11
RING/U-box superfamily protein
Chr2_+_12119285 1.14 AT2G28355.1
LCR5
low-molecular-weight cysteine-rich 5
Chr1_+_16151095 1.12 AT1G43005.1
AT1G43005
F-box/associated interaction domain protein
Chr2_+_9488413 1.10 AT2G22330.2
AT2G22330.1
CYP79B3
cytochrome P450, family 79, subfamily B, polypeptide 3
Chr4_+_11309879 1.09 AT4G21213.1
AT4G21213
hypothetical protein
Chr5_-_3334913 1.08 AT5G10550.1
GTE2
global transcription factor group E2
Chr2_-_5158744 1.06 AT2G12640.1
AT2G12640

Chr4_-_3052774 1.04 AT4G06474.1
AT4G06474

Chr1_-_16689563 1.01 AT1G43980.1
AT1G43980
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_16024854 1.01 AT2G38255.1
AT2G38255
hypothetical protein (DUF239)
Chr2_+_18804190 0.96 AT2G45650.1
AGL6
AGAMOUS-like 6
Chr5_-_12565780 0.94 AT5G33300.1
AT5G33300
chromosome-associated kinesin-like protein
Chr1_-_19250823 0.94 AT1G51840.1
AT1G51840.3
AT1G51840.4
AT1G51840.5
AT1G51840.2
AT1G51840
kinase-like protein
Chr4_-_17698991 0.92 AT4G37670.2
AT4G37670.1
NAGS2
N-acetyl-l-glutamate synthase 2
Chr2_-_13756893 0.91 AT2G32400.1
GLR5
glutamate receptor 5
Chr5_-_11721564 0.91 AT5G31804.1
AT5G31804

Chr2_+_12744116 0.90 AT2G29890.4
AT2G29890.1
AT2G29890.2
AT2G29890.3
AT2G29890.5
VLN1
villin-like 1
Chr5_-_8181107 0.89 AT5G24155.2
AT5G24155.3
AT5G24155.1
AT5G24155
FAD/NAD(P)-binding oxidoreductase family protein
Chr1_+_30241452 0.89 AT1G80440.1
AT1G80440
Galactose oxidase/kelch repeat superfamily protein
Chr3_+_11695756 0.89 AT3G29791.1
AT3G29791
hypothetical protein
Chr4_-_3958339 0.88 AT4G06702.1
AT4G06702

Chr2_+_18727504 0.87 AT2G45430.1
AHL22
AT-hook motif nuclear-localized protein 22
Chr1_+_16666418 0.86 AT1G43940.1
AT1G43940

Chr5_+_15305847 0.86 AT5G38300.1
AT5G38300
homeobox Hox-B3-like protein
Chr3_+_13601800 0.85 AT3G33058.1
AT3G33058

Chr5_+_24996129 0.80 AT5G62230.2
AT5G62230.1
ERL1
ERECTA-like 1
Chr3_-_20819517 0.80 AT3G56100.2
MRLK
meristematic receptor-like kinase
Chr4_-_14141054 0.79 AT4G28630.1
ABCB23
ABC transporter of the mitochondrion 1
Chr5_-_22410766 0.79 AT5G55250.2
IAMT1
IAA carboxylmethyltransferase 1
Chr5_+_12888194 0.79 AT5G34431.1
AT5G34431

Chr2_+_17195292 0.78 AT2G41231.2
AT2G41231.1
AT2G41231
transmembrane protein
Chr5_+_3072870 0.77 AT5G09870.1
CESA5
cellulose synthase 5
Chr5_-_22410974 0.75 AT5G55250.1
IAMT1
IAA carboxylmethyltransferase 1
Chr3_-_20819819 0.74 AT3G56100.1
MRLK
meristematic receptor-like kinase
Chr5_+_3253122 0.74 AT5G10340.1
AT5G10340
F-box family protein
Chr5_+_18295437 0.72 AT5G45210.4
AT5G45210.2
AT5G45210.3
AT5G45210.5
AT5G45210.1
AT5G45210
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_8592078 0.71 AT1G24256.1
AT1G24256
hypothetical protein
Chr3_+_2354640 0.70 AT3G07360.1
AT3G07360.4
AT3G07360.3
AT3G07360.5
AT3G07360.7
AT3G07360.8
AT3G07360.6
AT3G07360.2
PUB9
plant U-box 9
Chr3_+_11737049 0.69 AT3G29830.2
AT3G29830.1
AT3G29830
F-box/RNI-like superfamily protein
Chr3_+_11931287 0.68 AT3G30320.1
AT3G30320
hypothetical protein
Chr3_+_2355174 0.68 AT3G07360.10
AT3G07360.9
PUB9
plant U-box 9
Chr3_+_14895823 0.67 AT3G42794.1
AT3G42794

Chr1_+_11959287 0.66 AT1G33010.1
AT1G33010
F-box and associated interaction domains-containing protein
Chr1_+_7261481 0.63 AT1G20875.1
AT1G20875
hypothetical protein
Chr4_+_17844361 0.63 AT4G37950.1
AT4G37950
Rhamnogalacturonate lyase family protein
Chr4_+_17844656 0.63 AT4G37950.2
AT4G37950
Rhamnogalacturonate lyase family protein
Chr5_+_11739277 0.63 AT5G31821.1
AT5G31821

Chr2_-_19297858 0.62 AT2G46970.1
PIL1
phytochrome interacting factor 3-like 1
Chr3_-_9976390 0.62 AT3G27040.1
AT3G27040
MATH domain/coiled-coil protein
Chr3_-_13744449 0.62 AT3G33076.1
AT3G33076

Chr1_-_23595775 0.61 AT1G63640.2
AT1G63640.4
AT1G63640.5
AT1G63640.3
AT1G63640.1
AT1G63640
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein
Chr5_-_16033551 0.60 AT5G40050.1
AT5G40050
F-box/FBD-like domains containing protein
Chr5_+_13779115 0.60 AT5G35602.1
AT5G35602

Chr5_+_10683218 0.60 AT5G28660.1
AT5G28660
NHL domain-containing protein
Chr3_+_15219454 0.60 AT3G43260.1
AT3G43260
deoxyhypusine protein
Chr5_+_6833564 0.59 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr4_+_13675537 0.58 AT4G27310.1
BBX28
B-box type zinc finger family protein
Chr3_-_6343178 0.57 AT3G18485.1
ILR2
iaa-leucine resistant 2
Chr3_-_16037216 0.57 AT3G44380.1
AT3G44380
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr4_-_17838621 0.55 AT4G37940.4
AGL21
AGAMOUS-like 21
Chr5_-_9382331 0.54 AT5G26590.1
AT5G26590

Chr4_-_17837584 0.54 AT4G37940.2
AGL21
AGAMOUS-like 21
Chr1_+_11035992 0.53 AT1G30950.1
UFO
F-box family protein
Chr5_+_25537074 0.52 AT5G63810.1
BGAL10
beta-galactosidase 10
Chr1_-_12467841 0.52 AT1G34230.1
AT1G34230

Chr1_-_8882100 0.51 AT1G25330.1
CES
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_-_18655444 0.51 AT2G45230.1
AT2G45230

Chr2_+_505375 0.50 AT2G02070.1
AT2G02070.2
IDD5
indeterminate(ID)-domain 5
Chr3_+_18753337 0.50 AT3G50530.1
CRK
CDPK-related kinase
Chr4_-_17838969 0.50 AT4G37940.1
AT4G37940.3
AGL21
AGAMOUS-like 21
Chr1_+_4260783 0.50 AT1G12490.1
AT1G12490
F-box associated ubiquitination effector family protein
Chr3_+_18753541 0.49 AT3G50530.2
CRK
CDPK-related kinase
Chr2_-_16033169 0.48 AT2G38270.1
CXIP2
CAX-interacting protein 2
Chr2_+_2639598 0.48 AT2G06600.1
AT2G06600

Chr2_-_19297529 0.48 AT2G46970.2
AT2G46970.3
PIL1
phytochrome interacting factor 3-like 1
Chr2_-_18422839 0.48 AT2G44660.1
AT2G44660
ALG6, ALG8 glycosyltransferase family
Chr1_-_24714843 0.48 AT1G66290.1
AT1G66290
F-box/RNI-like superfamily protein
Chr3_-_12175434 0.47 AT3G30582.1
AT3G30582

Chr2_+_2667277 0.47 AT2G06680.1
AT2G06680

Chr3_-_12737948 0.47 AT3G31367.1
AT3G31367

Chr5_-_11802224 0.44 AT5G32053.1
AT5G32053

Chr2_+_749881 0.44 AT2G02690.2
AT2G02690.1
AT2G02690
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_30199537 0.44 AT1G80330.1
GA3OX4
gibberellin 3-oxidase 4
Chr5_-_14926325 0.44 AT5G37570.1
AT5G37570.2
AT5G37570
Pentatricopeptide repeat (PPR-like) superfamily protein
Chr2_+_4656594 0.43 AT2G11610.1
AT2G11610

Chr3_-_14172161 0.43 AT3G41345.1
AT3G41345

Chr5_+_10358184 0.43 AT5G28410.1
AT5G28410
hypothetical protein
Chr5_-_12841837 0.43 AT5G34412.1
AT5G34412

Chr3_+_14799890 0.42 AT3G42716.1
AT3G42716

Chr3_+_16056297 0.42 AT3G44420.2
AT3G44420

Chr3_-_5285767 0.42 AT3G15602.1
AT3G15602

Chr5_+_13543157 0.42 AT5G35336.1
AT5G35336

Chr4_+_2896376 0.42 AT4G05591.1
AT4G05591

Chr2_-_3561620 0.42 AT2G07791.1
AT2G07791

Chr1_+_14334140 0.42 AT1G38185.1
AT1G38185

Chr1_+_14248948 0.42 AT1G37669.1
AT1G37669

Chr2_+_5724007 0.41 AT2G13720.1
AT2G13720
putative DNA topoisomerase
Chr5_+_14750318 0.40 AT5G37250.2
AT5G37250.1
AT5G37250
RING/U-box superfamily protein
Chr1_-_3627082 0.40 AT1G10880.1
AT1G10880
core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein
Chr4_-_3950602 0.40 AT4G06700.1
AT4G06700

Chr3_-_16394579 0.39 AT3G44910.1
CHX12
cation/H+ exchanger 12
Chr5_+_24396981 0.39 AT5G60690.1
REV
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Chr5_-_22326418 0.39 AT5G55020.1
MYB120
myb domain protein 120
Chr2_+_2633129 0.38 AT2G06590.1
AT2G06590

Chr3_-_14398293 0.38 AT3G42240.1
AT3G42240

Chr4_+_4960143 0.37 AT4G08078.1
AT4G08078

Chr3_-_17135716 0.37 AT3G46540.1
AT3G46540
ENTH/VHS family protein
Chr3_-_17135205 0.36 AT3G46540.3
AT3G46540
ENTH/VHS family protein
Chr1_+_14188824 0.36 AT1G37170.1
AT1G37170

Chr3_-_17136152 0.35 AT3G46540.2
AT3G46540
ENTH/VHS family protein
Chr3_+_13871109 0.35 AT3G33106.1
AT3G33106

Chr4_+_9560078 0.35 AT4G16990.16
AT4G16990.17
AT4G16990.1
AT4G16990.3
AT4G16990.4
RLM3
disease resistance protein (TIR-NBS class)
Chr4_+_10901103 0.33 AT4G20180.1
AT4G20180

Chr4_+_1806588 0.33 AT4G03860.1
AT4G03860

Chr3_+_21147558 0.33 AT3G57130.2
AT3G57130.1
BOP1
Ankyrin repeat family protein / BTB/POZ domain-containing protein
Chr5_+_16370368 0.33 AT5G40860.2
AT5G40860.1
AT5G40860
transmembrane protein
Chr4_+_9558571 0.33 AT4G16990.5
AT4G16990.8
AT4G16990.7
AT4G16990.6
AT4G16990.2
AT4G16990.9
RLM3
disease resistance protein (TIR-NBS class)
Chr3_+_13675144 0.32 AT3G33084.1
AT3G33084

Chr5_+_11977548 0.32 AT5G32345.1
AT5G32345

Chr3_+_13803173 0.31 AT3G33069.1
AT3G33069

Chr3_-_4817981 0.31 AT3G14410.1
AT3G14410
Nucleotide/sugar transporter family protein
Chr3_-_13520041 0.31 AT3G32970.1
AT3G32970

Chr4_+_9559738 0.30 AT4G16990.11
AT4G16990.13
AT4G16990.12
RLM3
disease resistance protein (TIR-NBS class)
Chr4_+_9290403 0.30 AT4G16480.2
INT4
inositol transporter 4
Chr5_-_712791 0.29 AT5G03040.2
iqd2
IQ-domain 2
Chr5_+_6904672 0.29 AT5G20430.1
AT5G20430
Mob1/phocein family protein
Chr5_-_712994 0.29 AT5G03040.3
AT5G03040.1
iqd2
IQ-domain 2
Chr4_+_9559908 0.28 AT4G16990.15
AT4G16990.14
RLM3
disease resistance protein (TIR-NBS class)
Chr3_+_15644009 0.28 AT3G43740.1
AT3G43740.2
AT3G43740
Leucine-rich repeat (LRR) family protein
Chr5_-_4254436 0.28 AT5G13290.3
CRN
Protein kinase superfamily protein
Chr4_-_4637450 0.28 AT4G07820.1
AT4G07820
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr4_+_9560633 0.27 AT4G16990.19
AT4G16990.18
RLM3
disease resistance protein (TIR-NBS class)
Chr5_+_12023371 0.27 AT5G32410.2
AT5G32410

Chr2_+_100484 0.26 AT2G01150.2
AT2G01150.3
AT2G01150.1
RHA2B
RING-H2 finger protein 2B
Chr3_+_14645107 0.25 AT3G42540.1
AT3G42540

Chr4_-_6266938 0.24 AT4G10010.2
AT4G10010
Protein kinase superfamily protein
Chr3_-_13833069 0.23 AT3G33100.1
AT3G33100

Chr5_-_14680737 0.22 AT5G37125.1
AT5G37125

Chr5_+_3580396 0.22 AT5G11230.1
AT5G11230
Nucleotide-sugar transporter family protein
Chr4_+_9290898 0.21 AT4G16480.3
AT4G16480.1
INT4
inositol transporter 4
Chr4_+_9558962 0.21 AT4G16990.10
RLM3
disease resistance protein (TIR-NBS class)
Chr3_-_13817171 0.20 AT3G33080.1
AT3G33080

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G45680

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 16.3 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.8 2.4 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.6 3.6 GO:1904961 quiescent center organization(GO:1904961)
0.4 2.1 GO:1903963 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.4 4.9 GO:0007143 female meiotic division(GO:0007143)
0.4 4.6 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.2 3.4 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.2 1.1 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 0.9 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 2.4 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.2 3.5 GO:0009641 shade avoidance(GO:0009641)
0.2 0.9 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.2 2.1 GO:2000896 glycogen biosynthetic process(GO:0005978) amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.2 3.0 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.2 1.5 GO:0033206 meiotic cytokinesis(GO:0033206)
0.1 1.7 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 3.9 GO:0006284 base-excision repair(GO:0006284)
0.1 2.0 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.1 4.5 GO:0042335 cuticle development(GO:0042335)
0.1 0.3 GO:0010433 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.5 GO:0010422 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 2.2 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 1.9 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.1 0.9 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 2.4 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 3.5 GO:0019758 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.1 1.9 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.1 GO:1904589 regulation of protein import(GO:1904589)
0.1 1.9 GO:0010089 xylem development(GO:0010089)
0.0 0.3 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.0 1.0 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.6 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 2.5 GO:0000911 cytokinesis by cell plate formation(GO:0000911)
0.0 0.8 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.8 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.9 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.0 1.7 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 1.2 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.4 GO:0006265 DNA topological change(GO:0006265)
0.0 1.0 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 14.2 GO:0045893 positive regulation of transcription, DNA-templated(GO:0045893)
0.0 0.9 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 1.6 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.6 GO:0009269 response to desiccation(GO:0009269)
0.0 1.1 GO:0006897 endocytosis(GO:0006897)
0.0 0.4 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.3 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 1.7 GO:0048527 lateral root development(GO:0048527)
0.0 0.3 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.4 GO:0009686 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.6 GO:0010330 cellulose synthase complex(GO:0010330)
0.4 2.5 GO:0051233 spindle midzone(GO:0051233)
0.2 5.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.2 1.9 GO:0005884 actin filament(GO:0005884)
0.2 2.4 GO:0031902 late endosome membrane(GO:0031902)
0.1 1.1 GO:0030125 clathrin vesicle coat(GO:0030125)
0.1 1.0 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 3.5 GO:0005874 microtubule(GO:0005874)
0.0 3.4 GO:0048046 apoplast(GO:0048046)
0.0 11.4 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 13.1 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.9 GO:0015629 actin cytoskeleton(GO:0015629)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 16.3 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.7 2.1 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.6 2.4 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.5 2.2 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.5 2.1 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.5 0.9 GO:0003777 microtubule motor activity(GO:0003777)
0.4 2.0 GO:0016768 spermine synthase activity(GO:0016768)
0.4 3.9 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.3 4.5 GO:0051192 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.3 0.9 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.3 1.5 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.2 0.9 GO:0003680 AT DNA binding(GO:0003680)
0.2 1.4 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 3.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 3.4 GO:0004568 chitinase activity(GO:0004568)
0.1 8.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.9 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.4 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 0.5 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.1 0.6 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 1.2 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 2.4 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 3.2 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.1 2.4 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 1.7 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 1.1 GO:0030276 clathrin binding(GO:0030276)
0.0 0.3 GO:0019904 protein domain specific binding(GO:0019904)
0.0 3.0 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 6.6 GO:0008017 microtubule binding(GO:0008017)
0.0 2.4 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.9 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 0.4 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 1.0 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 1.2 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.6 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 1.2 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 3.5 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 1.9 GO:0051015 actin filament binding(GO:0051015)
0.0 3.1 GO:0008134 transcription factor binding(GO:0008134)
0.0 0.4 GO:0015385 sodium:proton antiporter activity(GO:0015385)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 PID NECTIN PATHWAY Nectin adhesion pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 REACTOME ARMS MEDIATED ACTIVATION Genes involved in ARMS-mediated activation