ISMARA results: AT2G44730

Project

GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G44730

Z-value: 0.43

Transcription factors associated with AT2G44730

Gene Symbol	Gene ID	Gene Info
AT2G44730 TAIR	AT2G44730	Alcohol dehydrogenase transcription factor Myb/SANT-like family protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
AT2G44730	arTal_v1_Chr2_-_18438565_18438565	-0.70	4.0e-05	Click!

Activity profile of AT2G44730 motif

Sorted Z-values of AT2G44730 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr5_+_24167996_24168072 Show fit	1.47	AT5G60020.1 AT5G60020.2	LAC17 TAIR Show fit	laccase 17
arTal_v1_Chr5_+_24168245_24168245 Show fit	1.13	AT5G60020.3	LAC17 TAIR Show fit	laccase 17
arTal_v1_Chr5_-_5741500_5741500 Show fit	0.95	AT5G17420.1	IRX3 TAIR Show fit	Cellulose synthase family protein
arTal_v1_Chr5_+_17714390_17714390 Show fit	0.89	AT5G44030.2 AT5G44030.1	CESA4 TAIR Show fit	cellulose synthase A4
arTal_v1_Chr5_-_24422274_24422274 Show fit	0.68	AT5G60720.1	AT5G60720 TAIR Show fit	electron transporter, putative (Protein of unknown function, DUF547)
arTal_v1_Chr5_+_25050679_25050679 Show fit	0.67	AT5G62380.2	NAC101 TAIR Show fit	NAC-domain protein 101
arTal_v1_Chr2_-_15589369_15589369 Show fit	0.63	AT2G37090.1	IRX9 TAIR Show fit	Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_+_25050152_25050152 Show fit	0.59	AT5G62380.1	NAC101 TAIR Show fit	NAC-domain protein 101
arTal_v1_Chr5_+_5084524_5084695 Show fit	0.58	AT5G15630.1 AT5G15630.2 AT5G15630.3 AT5G15630.4 AT5G15630.5	IRX6 TAIR Show fit	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr5_+_17715687_17715687 Show fit	0.53	AT5G44030.3	CESA4 TAIR Show fit	cellulose synthase A4

Showing 1 to 10 of 28 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G44730

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	2.6	GO:0009809	lignin biosynthetic process(GO:0009809)
0.0	1.4	GO:0009833	plant-type primary cell wall biogenesis(GO:0009833)
0.4	1.3	GO:0090058	metaxylem development(GO:0090058)
0.2	1.0	GO:0010395	rhamnogalacturonan I metabolic process(GO:0010395)
0.2	0.6	GO:0009805	coumarin biosynthetic process(GO:0009805)
0.1	0.6	GO:0090059	protoxylem development(GO:0090059)
0.0	0.6	GO:0052324	plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0	0.3	GO:2000652	regulation of secondary cell wall biogenesis(GO:2000652)
0.0	0.1	GO:0009808	lignin metabolic process(GO:0009808)

Showing 1 to 9 of 9 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.3	GO:0009531	secondary cell wall(GO:0009531)
0.2	1.0	GO:0010330	cellulose synthase complex(GO:0010330)

Showing 1 to 2 of 2 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	2.6	GO:0052716	hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1	2.4	GO:0016760	cellulose synthase (UDP-forming) activity(GO:0016760)
0.2	0.8	GO:0047517	1,4-beta-D-xylan synthase activity(GO:0047517)
0.3	0.5	GO:0080116	glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0	0.5	GO:0052747	sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1	0.4	GO:0042409	caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1	0.2	GO:0046409	p-coumarate 3-hydroxylase activity(GO:0046409)
0.0	0.1	GO:0016621	cinnamoyl-CoA reductase activity(GO:0016621)

Showing 1 to 8 of 8 entries

Results for AT2G44730

Z-value: 0.43

Transcription factors associated with AT2G44730

Activity-expression correlation:

Activity profile of AT2G44730 motif

Sorted Z-values of AT2G44730 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G44730

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: