Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT2G40740

Z-value: 2.77

Transcription factors associated with AT2G40740

Gene Symbol Gene ID Gene Info
AT2G40740
AT2G40740 WRKY DNA-binding protein 55

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
WRKY55arTal_v1_Chr2_+_16997078_16997177-0.301.3e-01Click!

Activity profile of AT2G40740 motif

Sorted Z-values of AT2G40740 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_8294446 6.45 AT4G14400.2
AT4G14400.3
ACD6
ankyrin repeat family protein
Chr5_+_24608605 6.24 AT5G61160.1
AACT1
anthocyanin 5-aromatic acyltransferase 1
Chr4_+_8294165 5.95 AT4G14400.1
ACD6
ankyrin repeat family protein
Chr2_-_6493512 4.94 AT2G15020.1
AT2G15020
hypothetical protein
Chr1_-_5133860 4.84 AT1G14880.1
PCR1
PLANT CADMIUM RESISTANCE 1
Chr3_-_19139423 4.82 AT3G51600.1
LTP5
lipid transfer protein 5
Chr1_+_1882907 4.76 AT1G06160.1
ORA59
octadecanoid-responsive AP2/ERF 59
Chr1_+_28177670 4.71 AT1G75040.1
PR5
pathogenesis-related protein 5
Chr2_+_16476198 4.48 AT2G39470.1
AT2G39470.2
AT2G39470.3
PnsL1
PsbP-like protein 2
Chr1_+_10477885 4.37 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr3_-_18294621 4.37 AT3G49340.1
AT3G49340
Cysteine proteinases superfamily protein
Chr5_-_7738535 4.35 AT5G23060.2
AT5G23060.1
CaS
calcium sensing receptor
Chr2_-_13862614 4.05 AT2G32680.1
RLP23
receptor like protein 23
Chr5_-_17962276 4.04 AT5G44568.1
AT5G44568
transmembrane protein
Chr1_+_21207537 3.98 AT1G56600.1
GolS2
galactinol synthase 2
Chr4_-_17289728 3.97 AT4G36670.1
PMT6
Major facilitator superfamily protein
Chr5_-_3402389 3.91 AT5G10760.1
AT5G10760
Eukaryotic aspartyl protease family protein
Chr5_-_8916856 3.90 AT5G25610.1
RD22
BURP domain-containing protein
Chr3_+_6180621 3.88 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr4_-_1112033 3.87 AT4G02520.1
GSTF2
glutathione S-transferase PHI 2
Chr2_-_16690182 3.85 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr1_+_7949476 3.80 AT1G22500.1
ATL15
RING/U-box superfamily protein
Chr1_-_24062804 3.79 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
Chr3_-_4775258 3.78 AT3G14310.1
PME3
pectin methylesterase 3
Chr3_-_8450799 3.77 AT3G23550.1
AT3G23550
MATE efflux family protein
Chr1_-_7400604 3.76 AT1G21130.2
AT1G21130.1
IGMT4
O-methyltransferase family protein
Chr3_-_23165387 3.75 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
Chr5_-_18588792 3.73 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
Chr5_-_22186633 3.71 AT5G54610.1
ANK
ankyrin
Chr1_+_24647121 3.67 AT1G66180.1
AT1G66180
Eukaryotic aspartyl protease family protein
Chr1_-_18413016 3.67 AT1G49750.1
AT1G49750
Leucine-rich repeat (LRR) family protein
Chr2_+_6518749 3.66 AT2G15050.3
AT2G15050.1
AT2G15050.2
LTP
lipid transfer protein
Chr1_-_4394343 3.60 AT1G12900.3
AT1G12900.4
AT1G12900.1
AT1G12900.2
AT1G12900.5
GAPA-2
glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Chr3_-_17495033 3.59 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
Chr3_+_4510965 3.57 AT3G13750.1
BGAL1
beta galactosidase 1
Chr2_+_19061688 3.57 AT2G46440.2
AT2G46440.1
CNGC11
cyclic nucleotide-gated channels
Chr4_+_10481619 3.51 AT4G19170.1
NCED4
nine-cis-epoxycarotenoid dioxygenase 4
Chr2_+_1966806 3.51 AT2G05380.1
AT2G05380.2
GRP3S
glycine-rich protein 3 short isoform
Chr1_-_6487153 3.49 AT1G18810.1
AT1G18810
phytochrome kinase substrate-like protein
Chr1_+_27338034 3.48 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr3_-_21183144 3.46 AT3G57240.1
BG3
beta-1,3-glucanase 3
Chr1_+_24349399 3.46 AT1G65486.3
AT1G65486.4
AT1G65486.1
AT1G65486.2
AT1G65486
transmembrane protein
Chr3_+_22373013 3.44 AT3G60530.1
GATA4
GATA transcription factor 4
Chr4_-_5779462 3.42 AT4G09010.1
AT4G09010.2
AT4G09010.3
TL29
ascorbate peroxidase 4
Chr1_+_2047886 3.42 AT1G06680.2
PSBP-1
photosystem II subunit P-1
Chr3_-_22322661 3.42 AT3G60390.1
HAT3
homeobox-leucine zipper protein 3
Chr1_+_2047634 3.41 AT1G06680.1
PSBP-1
photosystem II subunit P-1
Chr4_-_7857933 3.41 AT4G13500.1
AT4G13500
transmembrane protein
Chr4_-_18165740 3.40 AT4G38970.2
FBA2
fructose-bisphosphate aldolase 2
Chr4_-_18166008 3.39 AT4G38970.1
FBA2
fructose-bisphosphate aldolase 2
Chr1_+_6450585 3.36 AT1G18710.1
MYB47
myb domain protein 47
Chr2_+_13647699 3.36 AT2G32100.1
OFP16
ovate family protein 16
Chr5_+_6470072 3.35 AT5G19240.1
AT5G19240
Glycoprotein membrane precursor GPI-anchored
Chr3_-_197974 3.32 AT3G01500.1
CA1
carbonic anhydrase 1
Chr5_+_8365601 3.31 AT5G24490.1
AT5G24490
30S ribosomal protein
Chr5_+_7222179 3.29 AT5G21430.1
AT5G21430.2
NdhU
Chaperone DnaJ-domain superfamily protein
Chr1_+_24035941 3.28 AT1G64680.1
AT1G64680.2
AT1G64680
beta-carotene isomerase D27
Chr1_-_24996117 3.27 AT1G66970.2
AT1G66970.3
AT1G66970.1
SVL2
SHV3-like 2
Chr2_+_1966610 3.26 AT2G05380.3
GRP3S
glycine-rich protein 3 short isoform
Chr3_-_20341103 3.24 AT3G54890.3
AT3G54890.4
AT3G54890.2
AT3G54890.1
LHCA1
chlorophyll a-b binding protein 6
Chr3_-_1832190 3.23 AT3G06070.1
AT3G06070
hypothetical protein
Chr2_+_17507343 3.22 AT2G41940.1
ZFP8
zinc finger protein 8
Chr3_-_198160 3.21 AT3G01500.2
CA1
carbonic anhydrase 1
Chr1_-_20993569 3.20 AT1G56120.3
AT1G56120.2
AT1G56120
Leucine-rich repeat transmembrane protein kinase
Chr1_+_16127353 3.20 AT1G42970.1
GAPB
glyceraldehyde-3-phosphate dehydrogenase B subunit
Chr1_-_11297379 3.19 AT1G31550.1
AT1G31550.2
AT1G31550
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_12277417 3.17 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr5_-_7410102 3.17 AT5G22380.1
NAC090
NAC domain containing protein 90
Chr3_-_198664 3.12 AT3G01500.3
CA1
carbonic anhydrase 1
Chr2_+_8059106 3.12 AT2G18560.1
AT2G18560
UDP-Glycosyltransferase superfamily protein
Chr5_+_6006035 3.10 AT5G18170.1
GDH1
glutamate dehydrogenase 1
Chr5_+_17806397 3.09 AT5G44210.1
ERF9
erf domain protein 9
Chr5_-_3339384 3.08 AT5G10560.1
AT5G10560
Glycosyl hydrolase family protein
Chr5_+_26573964 3.08 AT5G66590.1
AT5G66590
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr5_-_7419335 3.07 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr2_-_2588448 3.07 AT2G06520.1
PSBX
photosystem II subunit X
Chr1_+_5460477 3.06 AT1G15885.1
AT1G15885
hypothetical protein
Chr2_-_12277245 3.05 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr3_-_18863397 3.05 AT3G50750.1
BEH1
BES1/BZR1 homolog 1
Chr2_-_10454591 3.01 AT2G24600.2
AT2G24600.3
AT2G24600.4
AT2G24600.1
AT2G24600
Ankyrin repeat family protein
Chr5_+_24046512 2.99 AT5G59680.1
AT5G59680
Leucine-rich repeat protein kinase family protein
Chr3_-_17837998 2.99 AT3G48200.1
AT3G48200
transmembrane protein
Chr4_-_15275404 2.97 AT4G31500.1
CYP83B1
cytochrome P450, family 83, subfamily B, polypeptide 1
Chr4_+_7521257 2.97 AT4G12800.2
AT4G12800.1
PSAL
photosystem I subunit l
Chr4_-_69884 2.97 AT4G00165.2
AT4G00165.1
AT4G00165
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_197564 2.97 AT3G01500.4
CA1
carbonic anhydrase 1
Chr2_+_7406911 2.96 AT2G17040.1
NAC036
NAC domain containing protein 36
Chr5_+_25616625 2.96 AT5G64000.2
AT5G64000.1
SAL2
Inositol monophosphatase family protein
Chr2_+_19243348 2.93 AT2G46820.1
AT2G46820.2
PSI-P
photosystem I P subunit
Chr1_+_13220471 2.92 AT1G35710.1
AT1G35710
kinase family with leucine-rich repeat domain-containing protein
Chr3_-_4744263 2.92 AT3G14240.1
AT3G14240
Subtilase family protein
Chr1_-_4530222 2.92 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr4_-_7153571 2.91 AT4G11900.10
AT4G11900.8
AT4G11900.9
AT4G11900.7
AT4G11900.6
AT4G11900.3
AT4G11900.5
AT4G11900.2
AT4G11900.4
AT4G11900.1
AT4G11900
S-locus lectin protein kinase family protein
Chr4_+_11929359 2.88 AT4G22690.1
CYP706A1
cytochrome P450, family 706, subfamily A, polypeptide 1
Chr5_+_6017797 2.87 AT5G18210.1
AT5G18210.2
AT5G18210
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_907523 2.87 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
Chr1_+_8544248 2.85 AT1G24148.1
AT1G24148.2
AT1G24148
hypothetical protein
Chr1_+_27435306 2.85 AT1G72910.1
AT1G72910
Toll-Interleukin-Resistance (TIR) domain-containing protein
Chr2_-_17777717 2.84 AT2G42690.1
AT2G42690
alpha/beta-Hydrolases superfamily protein
Chr1_+_26141726 2.84 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr3_-_5469594 2.83 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr5_+_7168106 2.82 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr5_-_20110638 2.80 AT5G49555.1
AT5G49555
FAD/NAD(P)-binding oxidoreductase family protein
Chr1_-_25714807 2.80 AT1G68530.2
KCS6
3-ketoacyl-CoA synthase 6
Chr4_-_18428412 2.79 AT4G39710.2
AT4G39710.3
AT4G39710.1
PnsL4
FK506-binding protein 16-2
Chr1_-_25715024 2.79 AT1G68530.1
KCS6
3-ketoacyl-CoA synthase 6
Chr4_-_12120214 2.78 AT4G23130.2
AT4G23130.1
AT4G23130.3
CRK5
cysteine-rich RLK (RECEPTOR-like protein kinase) 5
Chr1_+_21564111 2.78 AT1G58225.2
AT1G58225.1
AT1G58225
hypothetical protein
Chr3_+_22086333 2.78 AT3G59780.1
AT3G59780
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr2_+_18537177 2.77 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
Chr1_-_27265806 2.75 AT1G72430.1
AT1G72430
SAUR-like auxin-responsive protein family
Chr1_-_19822399 2.75 AT1G53170.1
ERF8
ethylene response factor 8
Chr1_-_8425385 2.73 AT1G23840.1
AT1G23840
transmembrane protein
Chr5_+_23225951 2.73 AT5G57340.2
AT5G57340.1
AT5G57340
ras guanine nucleotide exchange factor Q-like protein
Chr5_+_2446669 2.73 AT5G07690.1
MYB29
myb domain protein 29
Chr5_+_18697235 2.73 AT5G46110.2
AT5G46110.1
AT5G46110.3
AT5G46110.4
APE2
Glucose-6-phosphate/phosphate translocator-like protein
Chr5_+_22468579 2.73 AT5G55460.1
AT5G55460
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_19685747 2.71 AT1G52870.1
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr4_+_18519599 2.71 AT4G39940.1
AKN2
APS-kinase 2
Chr1_+_19685545 2.70 AT1G52870.2
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr2_-_16950705 2.70 AT2G40610.1
EXPA8
expansin A8
Chr5_+_25037191 2.70 AT5G62350.1
AT5G62350
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_6409655 2.69 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
Chr2_+_16666023 2.69 AT2G39930.3
AT2G39930.2
ISA1
isoamylase 1
Chr1_-_3443957 2.68 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
Chr1_+_3015237 2.67 AT1G09340.2
AT1G09340.1
CRB
chloroplast RNA binding protein
Chr4_+_12310619 2.67 AT4G23600.3
CORI3
Tyrosine transaminase family protein
Chr4_+_17643110 2.67 AT4G37550.4
AT4G37550.1
AT4G37550.2
AT4G37550
Acetamidase/Formamidase family protein
Chr4_-_7992429 2.66 AT4G13770.1
CYP83A1
cytochrome P450, family 83, subfamily A, polypeptide 1
Chr1_-_29352946 2.66 AT1G78060.1
AT1G78060
Glycosyl hydrolase family protein
Chr1_+_20101299 2.66 AT1G53840.1
PME1
pectin methylesterase 1
Chr3_+_21238223 2.66 AT3G57400.1
AT3G57400
transmembrane protein
Chr3_+_20644843 2.66 AT3G55646.1
AT3G55646
TPRXL
Chr4_+_12310379 2.66 AT4G23600.1
CORI3
Tyrosine transaminase family protein
Chr4_+_17986384 2.65 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
Chr3_+_6465748 2.65 AT3G18773.1
AT3G18773
RING/U-box superfamily protein
Chr4_+_8883825 2.63 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
Chr5_-_10028525 2.63 AT5G28020.3
AT5G28020.1
AT5G28020.6
AT5G28020.4
AT5G28020.2
CYSD2
cysteine synthase D2
Chr2_-_13020311 2.62 AT2G30570.1
PSBW
photosystem II reaction center W
Chr1_-_3444360 2.61 AT1G10470.1
ARR4
response regulator 4
Chr4_+_17643548 2.61 AT4G37550.6
AT4G37550.3
AT4G37550
Acetamidase/Formamidase family protein
Chr1_+_30241452 2.61 AT1G80440.1
AT1G80440
Galactose oxidase/kelch repeat superfamily protein
Chr2_-_15273115 2.60 AT2G36400.1
GRF3
growth-regulating factor 3
Chr2_+_12597018 2.59 AT2G29340.2
AT2G29340.1
AT2G29340.3
AT2G29340.4
AT2G29340
NAD-dependent epimerase/dehydratase family protein
Chr5_-_3930305 2.59 AT5G12150.2
AT5G12150.1
AT5G12150
Rho GTPase activation protein (RhoGAP) with PH domain-containing protein
Chr3_+_16525245 2.58 AT3G45140.1
AT3G45140.2
LOX2
lipoxygenase 2
Chr4_-_12890261 2.57 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
Chr4_+_12121369 2.57 AT4G23140.1
AT4G23140.2
CRK6
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Chr5_-_17581275 2.56 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr4_-_2118617 2.56 AT4G04330.1
RbcX1
Chaperonin-like RbcX protein
Chr1_+_24468770 2.55 AT1G65790.2
AT1G65790.1
AT1G65790.3
RK1
receptor kinase 1
Chr4_+_222289 2.55 AT4G00490.1
BAM2
beta-amylase 2
Chr1_-_19101265 2.54 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
Chr5_-_21246682 2.52 AT5G52320.2
AT5G52320.1
CYP96A4
cytochrome P450, family 96, subfamily A, polypeptide 4
Chr3_-_11533028 2.51 AT3G29680.1
AT3G29680
HXXXD-type acyl-transferase family protein
Chr4_-_8016582 2.51 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
Chr1_-_27853233 2.48 AT1G74070.2
AT1G74070.1
AT1G74070
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr4_-_8454144 2.46 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
Chr1_-_25395249 2.46 AT1G67740.1
PSBY
photosystem II BY
Chr3_+_17949416 2.44 AT3G48460.1
AT3G48460
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_24354646 2.43 AT1G65490.2
AT1G65490.3
AT1G65490.1
AT1G65490
transmembrane protein
Chr4_+_12310885 2.42 AT4G23600.2
CORI3
Tyrosine transaminase family protein
Chr1_+_9425280 2.42 AT1G27130.1
GSTU13
glutathione S-transferase tau 13
Chr1_-_5562113 2.41 AT1G16260.2
AT1G16260.3
AT1G16260.1
AT1G16260
Wall-associated kinase family protein
Chr1_-_7388512 2.41 AT1G21100.1
IGMT1
O-methyltransferase family protein
Chr5_-_21651626 2.38 AT5G53370.1
AT5G53370.2
PMEPCRF
pectin methylesterase PCR fragment F
Chr2_+_16665851 2.38 AT2G39930.1
ISA1
isoamylase 1
Chr1_-_20993072 2.37 AT1G56120.1
AT1G56120
Leucine-rich repeat transmembrane protein kinase
Chr4_-_12768239 2.36 AT4G24770.1
RBP31
31-kDa RNA binding protein
Chr5_+_15608685 2.35 AT5G38990.1
AT5G38990
Malectin/receptor-like protein kinase family protein
Chr4_-_13672413 2.35 AT4G27300.1
AT4G27300
S-locus lectin protein kinase family protein
Chr5_-_10027868 2.34 AT5G28020.5
CYSD2
cysteine synthase D2
Chr5_+_24041338 2.33 AT5G59670.1
AT5G59670
Leucine-rich repeat protein kinase family protein
Chr1_+_10375754 2.33 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_417427 2.33 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
Chr1_+_27786864 2.32 AT1G73885.1
AT1G73885
AT-rich interactive domain protein
Chr4_-_12769419 2.32 AT4G24770.2
RBP31
31-kDa RNA binding protein
Chr1_+_13208683 2.31 AT1G35680.1
RPL21C
Ribosomal protein L21
Chr4_+_13388290 2.31 AT4G26520.2
AT4G26520.1
AT4G26520.3
FBA7
Aldolase superfamily protein
Chr2_+_9636346 2.30 AT2G22670.1
AT2G22670.4
AT2G22670.2
AT2G22670.5
AT2G22670.3
IAA8
indoleacetic acid-induced protein 8
Chr4_+_3356535 2.30 AT4G06534.1
AT4G06534
transmembrane protein
Chr5_+_1615507 2.30 AT5G05460.1
ENGase85A
Glycosyl hydrolase family 85
Chr2_-_14200674 2.29 AT2G33530.1
scpl46
serine carboxypeptidase-like 46
Chr2_-_8706900 2.29 AT2G20180.5
AT2G20180.4
AT2G20180.8
AT2G20180.2
AT2G20180.1
AT2G20180.7
AT2G20180.6
AT2G20180.3
PIL5
phytochrome interacting factor 3-like 5
Chr3_+_20016837 2.28 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
Chr5_+_24041131 2.28 AT5G59670.2
AT5G59670
Leucine-rich repeat protein kinase family protein
Chr5_+_21582614 2.28 AT5G53200.1
TRY
Homeodomain-like superfamily protein
Chr4_+_10073711 2.28 AT4G18205.1
AT4G18205
Nucleotide-sugar transporter family protein
Chr4_-_2352025 2.28 AT4G04640.1
ATPC1
ATPase, F1 complex, gamma subunit protein
Chr5_+_24480291 2.27 AT5G60850.1
OBP4
OBF binding protein 4
Chr1_-_8983314 2.26 AT1G25560.1
TEM1
AP2/B3 transcription factor family protein
Chr1_-_24502776 2.25 AT1G65860.1
FMO GS-OX1
flavin-monooxygenase glucosinolate S-oxygenase 1
Chr1_+_6389399 2.25 AT1G18570.1
MYB51
myb domain protein 51
Chr1_+_10375599 2.23 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_25472577 2.23 AT1G67910.1
AT1G67910
hypothetical protein
Chr2_-_14909863 2.23 AT2G35470.1
AT2G35470
ribosome maturation factor
Chr3_+_5187082 2.22 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
Chr1_+_21136835 2.22 AT1G56430.1
NAS4
nicotianamine synthase 4
Chr3_+_18049571 2.21 AT3G48730.1
GSA2
glutamate-1-semialdehyde 2,1-aminomutase 2
Chr5_-_1139631 2.21 AT5G04150.2
AT5G04150.1
BHLH101
basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G40740

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 1.8 GO:0090355 positive regulation of auxin metabolic process(GO:0090355)
1.4 4.1 GO:0032491 detection of molecule of fungal origin(GO:0032491)
1.4 13.5 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
1.2 16.0 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
1.2 4.8 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
1.1 6.8 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
1.1 10.0 GO:0051513 regulation of monopolar cell growth(GO:0051513)
1.1 3.3 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.9 2.8 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.9 2.7 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.9 2.7 GO:0071461 cellular response to redox state(GO:0071461)
0.9 4.5 GO:0071277 cellular response to calcium ion(GO:0071277)
0.9 5.3 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.9 2.6 GO:0042549 photosystem II stabilization(GO:0042549)
0.9 3.5 GO:0010480 microsporocyte differentiation(GO:0010480)
0.9 2.6 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.8 3.3 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.8 3.9 GO:0005980 glycogen catabolic process(GO:0005980)
0.8 13.9 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.8 6.1 GO:0043489 RNA stabilization(GO:0043489)
0.8 3.0 GO:0006517 protein deglycosylation(GO:0006517)
0.7 2.2 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.7 2.2 GO:1990532 stress response to nickel ion(GO:1990532)
0.7 2.1 GO:0009234 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.7 2.1 GO:1905182 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.7 2.7 GO:0010618 aerenchyma formation(GO:0010618)
0.7 2.0 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.6 2.6 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.6 3.2 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.6 1.9 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.6 6.3 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.6 1.9 GO:0046521 sphingoid catabolic process(GO:0046521)
0.6 5.6 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.6 3.6 GO:0051098 regulation of binding(GO:0051098)
0.6 2.9 GO:0006013 mannose metabolic process(GO:0006013)
0.6 7.0 GO:0032544 plastid translation(GO:0032544)
0.6 2.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.6 2.8 GO:0071493 cellular response to UV-B(GO:0071493)
0.6 9.1 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.6 6.8 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.6 5.0 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.6 12.1 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.5 14.2 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.5 1.1 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.5 4.3 GO:0031222 arabinan catabolic process(GO:0031222)
0.5 1.6 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.5 3.2 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.5 5.8 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155) negative regulation of photosynthesis(GO:1905156)
0.5 3.7 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.5 2.1 GO:0000023 maltose metabolic process(GO:0000023)
0.5 3.1 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.5 2.5 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.5 2.5 GO:0006788 heme oxidation(GO:0006788)
0.5 2.5 GO:0051289 protein homotetramerization(GO:0051289)
0.5 4.9 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.5 2.9 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.5 1.4 GO:0098740 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.5 1.9 GO:0009660 amyloplast organization(GO:0009660)
0.5 1.8 GO:0071323 cellular response to chitin(GO:0071323)
0.5 4.1 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.5 7.3 GO:0006538 glutamate catabolic process(GO:0006538)
0.5 1.4 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.5 1.4 GO:0010063 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.5 5.9 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.4 5.4 GO:0009608 response to symbiont(GO:0009608)
0.4 2.6 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.4 2.6 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.4 2.2 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.4 1.7 GO:0006968 cellular defense response(GO:0006968)
0.4 1.7 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.4 2.1 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.4 0.4 GO:0002683 negative regulation of immune system process(GO:0002683) negative regulation of immune response(GO:0050777)
0.4 2.5 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.4 1.2 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.4 6.5 GO:0006112 glycogen metabolic process(GO:0005977) energy reserve metabolic process(GO:0006112)
0.4 0.8 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.4 3.9 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.4 1.9 GO:0006884 cell volume homeostasis(GO:0006884)
0.4 0.8 GO:1902065 response to L-glutamate(GO:1902065)
0.4 2.7 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.4 1.5 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.4 2.2 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.4 3.7 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.4 5.2 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.4 1.5 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.4 0.4 GO:0015675 nickel cation transport(GO:0015675)
0.4 1.5 GO:0015720 allantoin transport(GO:0015720)
0.4 1.4 GO:0042780 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414) tRNA 3'-trailer cleavage(GO:0042779) tRNA 3'-end processing(GO:0042780)
0.4 3.6 GO:1902408 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.4 7.8 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.4 3.5 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.4 10.5 GO:0006284 base-excision repair(GO:0006284)
0.4 0.4 GO:0031221 arabinan metabolic process(GO:0031221)
0.3 1.7 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.3 1.0 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.3 4.1 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.3 4.8 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.3 2.0 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.3 1.0 GO:0035445 borate transmembrane transport(GO:0035445)
0.3 1.4 GO:0000098 sulfur amino acid catabolic process(GO:0000098)
0.3 1.0 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.3 2.0 GO:0000719 photoreactive repair(GO:0000719)
0.3 1.3 GO:1902475 L-alpha-amino acid transmembrane transport(GO:1902475)
0.3 1.6 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.3 2.6 GO:0080190 lateral growth(GO:0080190)
0.3 1.0 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.3 1.9 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.3 0.3 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.3 0.9 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.3 1.2 GO:0009557 antipodal cell differentiation(GO:0009557)
0.3 0.9 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.3 1.8 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.3 0.6 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.3 3.6 GO:0080144 amino acid homeostasis(GO:0080144)
0.3 0.9 GO:0009915 phloem sucrose loading(GO:0009915)
0.3 0.9 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.3 1.2 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.3 4.7 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.3 0.9 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.3 12.0 GO:0002239 response to oomycetes(GO:0002239)
0.3 2.3 GO:0006047 UDP-N-acetylglucosamine metabolic process(GO:0006047) amino sugar biosynthetic process(GO:0046349)
0.3 1.1 GO:0010272 response to silver ion(GO:0010272)
0.3 4.4 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.3 1.9 GO:0043446 cellular alkane metabolic process(GO:0043446)
0.3 2.5 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.3 0.6 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.3 4.1 GO:0055069 zinc ion homeostasis(GO:0055069)
0.3 1.1 GO:0035264 multicellular organism growth(GO:0035264)
0.3 1.6 GO:0006491 N-glycan processing(GO:0006491)
0.3 4.2 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.3 4.2 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.3 0.8 GO:0010148 transpiration(GO:0010148)
0.3 1.3 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.3 1.6 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.3 1.8 GO:0072337 modified amino acid transport(GO:0072337)
0.3 2.6 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.3 1.3 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.3 1.5 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.3 0.5 GO:0046937 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.3 6.1 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.2 0.7 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.2 2.0 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.2 0.5 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.2 3.4 GO:0000103 sulfate assimilation(GO:0000103)
0.2 1.0 GO:0019627 urea metabolic process(GO:0019627)
0.2 0.7 GO:0051639 actin filament network formation(GO:0051639)
0.2 2.6 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.2 4.8 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.2 1.7 GO:0046368 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.2 0.7 GO:0071047 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.2 0.7 GO:0080171 lytic vacuole organization(GO:0080171)
0.2 0.7 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.2 1.9 GO:0010230 alternative respiration(GO:0010230)
0.2 0.9 GO:1901600 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.2 0.9 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.2 1.1 GO:0010731 protein glutathionylation(GO:0010731)
0.2 1.3 GO:0006071 glycerol metabolic process(GO:0006071)
0.2 2.0 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.2 2.6 GO:0015749 monosaccharide transport(GO:0015749)
0.2 4.2 GO:0006949 syncytium formation(GO:0006949)
0.2 0.7 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.2 1.3 GO:0016120 carotene biosynthetic process(GO:0016120)
0.2 1.1 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.2 0.2 GO:2000142 regulation of DNA-templated transcription, initiation(GO:2000142)
0.2 3.2 GO:0006465 signal peptide processing(GO:0006465)
0.2 3.6 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.2 0.6 GO:0018279 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.2 2.5 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.2 4.0 GO:0009959 negative gravitropism(GO:0009959)
0.2 0.8 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.2 0.4 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.8 GO:0071486 response to UV-A(GO:0070141) cellular response to high light intensity(GO:0071486) cellular response to UV-A(GO:0071492)
0.2 3.3 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.2 3.1 GO:0009098 leucine biosynthetic process(GO:0009098)
0.2 0.2 GO:1990110 callus formation(GO:1990110)
0.2 1.4 GO:0010161 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.2 0.6 GO:1904812 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.2 0.4 GO:0016073 snRNA metabolic process(GO:0016073)
0.2 3.7 GO:0009269 response to desiccation(GO:0009269)
0.2 25.1 GO:0015979 photosynthesis(GO:0015979)
0.2 1.5 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.2 7.6 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.2 3.2 GO:0000373 Group II intron splicing(GO:0000373)
0.2 2.4 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.2 0.7 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.2 0.7 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.2 0.9 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.2 1.6 GO:0010098 suspensor development(GO:0010098)
0.2 1.1 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.2 0.7 GO:0000459 exonucleolytic trimming involved in rRNA processing(GO:0000459) exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000467) tRNA catabolic process(GO:0016078) nuclear polyadenylation-dependent tRNA catabolic process(GO:0071038) RNA phosphodiester bond hydrolysis, exonucleolytic(GO:0090503)
0.2 1.2 GO:2000034 regulation of seed maturation(GO:2000034)
0.2 1.9 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 0.4 GO:0046506 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.2 1.0 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.2 0.5 GO:0010198 synergid death(GO:0010198)
0.2 3.1 GO:1900865 chloroplast RNA modification(GO:1900865)
0.2 2.0 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.2 1.0 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.2 5.5 GO:0016132 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.2 2.3 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.2 1.1 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.2 1.0 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.2 1.6 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.2 1.3 GO:0016045 detection of bacterium(GO:0016045)
0.2 0.3 GO:0010338 leaf formation(GO:0010338)
0.2 1.4 GO:0071249 cellular response to nitrate(GO:0071249)
0.2 0.8 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.2 3.2 GO:0065001 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.2 1.9 GO:0005987 sucrose catabolic process(GO:0005987)
0.2 6.9 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.2 2.0 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.2 2.3 GO:0044070 regulation of anion transport(GO:0044070)
0.2 2.0 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.2 1.1 GO:0007021 tubulin complex assembly(GO:0007021)
0.2 2.6 GO:0000165 MAPK cascade(GO:0000165)
0.2 0.3 GO:0002215 defense response to nematode(GO:0002215)
0.1 1.6 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.1 3.0 GO:0009581 detection of external stimulus(GO:0009581) detection of abiotic stimulus(GO:0009582)
0.1 0.4 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 3.8 GO:0010027 thylakoid membrane organization(GO:0010027)
0.1 1.8 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 3.4 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.1 1.2 GO:0046185 aldehyde catabolic process(GO:0046185)
0.1 8.8 GO:0048544 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.1 0.7 GO:0010155 regulation of proton transport(GO:0010155)
0.1 3.2 GO:0009638 phototropism(GO:0009638)
0.1 0.8 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 1.1 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 0.4 GO:0051319 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) cell cycle phase(GO:0022403) biological phase(GO:0044848) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329) mitotic cell cycle phase(GO:0098763)
0.1 0.8 GO:0052542 defense response by callose deposition(GO:0052542)
0.1 0.3 GO:0061013 regulation of mRNA catabolic process(GO:0061013)
0.1 1.1 GO:0007020 microtubule nucleation(GO:0007020)
0.1 0.5 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 1.9 GO:0010229 inflorescence development(GO:0010229)
0.1 0.1 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116) positive regulation of alcohol biosynthetic process(GO:1902932)
0.1 1.9 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.4 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.1 2.4 GO:0034033 coenzyme A biosynthetic process(GO:0015937) nucleoside bisphosphate biosynthetic process(GO:0033866) ribonucleoside bisphosphate biosynthetic process(GO:0034030) purine nucleoside bisphosphate biosynthetic process(GO:0034033)
0.1 2.6 GO:0009251 glucan catabolic process(GO:0009251)
0.1 0.7 GO:0034227 tRNA thio-modification(GO:0034227)
0.1 1.1 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 3.1 GO:0071489 red or far-red light signaling pathway(GO:0010017) cellular response to red or far red light(GO:0071489)
0.1 1.0 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.5 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 2.3 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.1 0.7 GO:2000068 regulation of defense response to insect(GO:2000068)
0.1 1.5 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 1.2 GO:0009851 auxin biosynthetic process(GO:0009851)
0.1 0.8 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.1 2.8 GO:0006487 protein N-linked glycosylation(GO:0006487)
0.1 1.9 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 1.6 GO:0030488 tRNA methylation(GO:0030488)
0.1 0.8 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 0.8 GO:0052543 callose deposition in cell wall(GO:0052543)
0.1 0.4 GO:0016540 protein autoprocessing(GO:0016540)
0.1 0.8 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.6 GO:0015866 ADP transport(GO:0015866) ATP transport(GO:0015867) AMP transport(GO:0080121)
0.1 0.3 GO:1902534 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.1 0.8 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.1 2.7 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.1 0.6 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 0.8 GO:0033383 geranyl diphosphate metabolic process(GO:0033383) geranyl diphosphate biosynthetic process(GO:0033384)
0.1 0.3 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.1 0.6 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 1.0 GO:0043171 peptide catabolic process(GO:0043171)
0.1 3.2 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.1 0.2 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.1 1.1 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 6.1 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 0.3 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 0.3 GO:0032409 regulation of transporter activity(GO:0032409)
0.1 4.8 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.1 0.7 GO:0046466 membrane lipid catabolic process(GO:0046466)
0.1 1.5 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.3 GO:0090549 response to carbon starvation(GO:0090549)
0.1 0.3 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 1.1 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.1 0.4 GO:0043692 monoterpene metabolic process(GO:0043692)
0.1 5.7 GO:0071369 cellular response to ethylene stimulus(GO:0071369)
0.1 0.9 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.1 0.9 GO:1903338 regulation of cell wall organization or biogenesis(GO:1903338)
0.1 0.3 GO:0071569 protein ufmylation(GO:0071569)
0.1 0.3 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 0.7 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.1 0.3 GO:0046156 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.1 0.9 GO:0018344 protein geranylgeranylation(GO:0018344)
0.1 2.3 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.1 0.6 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.1 0.8 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.1 1.5 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.2 GO:0090342 regulation of cell aging(GO:0090342)
0.1 3.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 1.0 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.1 0.7 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.3 GO:0045682 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.1 0.3 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.2 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.1 1.4 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.8 GO:0006266 DNA ligation(GO:0006266)
0.1 0.5 GO:0009071 serine family amino acid catabolic process(GO:0009071)
0.1 0.4 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.1 0.7 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.1 3.2 GO:0006400 tRNA modification(GO:0006400)
0.1 0.4 GO:0043478 pigmentation(GO:0043473) pigment accumulation(GO:0043476) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 3.5 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.1 0.9 GO:0032042 mitochondrial DNA metabolic process(GO:0032042)
0.1 0.8 GO:0034472 snRNA 3'-end processing(GO:0034472)
0.1 1.1 GO:0048766 root hair initiation(GO:0048766)
0.1 0.3 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 0.5 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.1 2.9 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.1 2.0 GO:0010091 trichome branching(GO:0010091)
0.1 0.6 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 1.1 GO:1902099 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.1 4.9 GO:0045454 cell redox homeostasis(GO:0045454)
0.1 1.9 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.1 0.7 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 1.1 GO:1990414 replication-born double-strand break repair via sister chromatid exchange(GO:1990414)
0.1 0.7 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.6 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 1.5 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.1 1.6 GO:0006378 mRNA polyadenylation(GO:0006378)
0.1 0.3 GO:0019673 GDP-mannose metabolic process(GO:0019673)
0.1 1.3 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.1 0.4 GO:0046578 Ras protein signal transduction(GO:0007265) ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012) regulation of Ras protein signal transduction(GO:0046578) regulation of small GTPase mediated signal transduction(GO:0051056)
0.1 0.2 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.1 8.7 GO:0006457 protein folding(GO:0006457)
0.1 1.4 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.1 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.1 0.9 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.1 0.5 GO:0015846 polyamine transport(GO:0015846)
0.1 0.3 GO:0009304 tRNA transcription(GO:0009304)
0.1 0.6 GO:0070475 rRNA base methylation(GO:0070475)
0.1 0.4 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 0.2 GO:0015696 ammonium transport(GO:0015696)
0.1 0.6 GO:0005513 detection of calcium ion(GO:0005513)
0.1 0.4 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.6 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.1 5.5 GO:0009411 response to UV(GO:0009411)
0.1 1.1 GO:0006754 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.1 0.8 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 0.6 GO:0070131 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.1 0.4 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 0.4 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 1.0 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.1 1.4 GO:0031348 negative regulation of defense response(GO:0031348)
0.1 1.1 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.1 0.3 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 0.6 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.4 GO:0032456 endocytic recycling(GO:0032456)
0.1 0.4 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.1 0.2 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.1 0.7 GO:0032366 intracellular sterol transport(GO:0032366)
0.1 0.3 GO:2001022 positive regulation of DNA repair(GO:0045739) positive regulation of response to DNA damage stimulus(GO:2001022)
0.1 1.1 GO:0006817 phosphate ion transport(GO:0006817)
0.1 1.1 GO:0060627 regulation of vesicle-mediated transport(GO:0060627)
0.1 1.6 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.1 0.5 GO:0009452 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.1 3.9 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.1 0.8 GO:0009649 entrainment of circadian clock(GO:0009649)
0.1 1.0 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.1 0.7 GO:0019852 L-ascorbic acid metabolic process(GO:0019852)
0.1 0.2 GO:0006423 cysteinyl-tRNA aminoacylation(GO:0006423)
0.1 0.2 GO:0006471 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.1 1.6 GO:0009559 embryo sac central cell differentiation(GO:0009559)
0.1 0.2 GO:0048629 trichome patterning(GO:0048629)
0.1 1.6 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.1 0.8 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.6 GO:0009696 salicylic acid metabolic process(GO:0009696)
0.1 0.2 GO:0044154 histone H4-K8 acetylation(GO:0043982) histone H3-K14 acetylation(GO:0044154)
0.1 0.2 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203) UDP-glucuronate metabolic process(GO:0046398)
0.1 0.3 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.3 GO:0007142 male meiosis II(GO:0007142)
0.1 0.3 GO:0080187 floral organ senescence(GO:0080187)
0.1 0.2 GO:0009088 threonine biosynthetic process(GO:0009088)
0.1 2.0 GO:0042255 ribosome assembly(GO:0042255)
0.1 2.4 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.1 0.5 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 4.0 GO:0006869 lipid transport(GO:0006869)
0.1 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.3 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.0 0.5 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.1 GO:0010447 response to acidic pH(GO:0010447)
0.0 3.6 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 0.4 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.6 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.5 GO:0016093 polyprenol metabolic process(GO:0016093)
0.0 0.1 GO:0006892 post-Golgi vesicle-mediated transport(GO:0006892)
0.0 0.4 GO:0043269 regulation of ion transport(GO:0043269)
0.0 0.7 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 1.8 GO:0006839 mitochondrial transport(GO:0006839)
0.0 0.2 GO:0019323 pentose catabolic process(GO:0019323)
0.0 0.2 GO:0000963 mitochondrial RNA processing(GO:0000963)
0.0 0.4 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.0 0.1 GO:0006425 glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 1.5 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.0 0.7 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.3 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.0 0.2 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.0 0.2 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.1 GO:0048479 style development(GO:0048479)
0.0 0.6 GO:0006301 postreplication repair(GO:0006301)
0.0 0.6 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.1 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.0 0.4 GO:0046739 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.6 GO:0048825 cotyledon development(GO:0048825)
0.0 0.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.2 GO:0070981 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.0 0.4 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.4 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.3 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 0.1 GO:0097502 mannosylation(GO:0097502)
0.0 0.1 GO:0046391 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.0 0.1 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.0 0.4 GO:0000266 mitochondrial fission(GO:0000266)
0.0 0.6 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.1 GO:0010508 positive regulation of autophagy(GO:0010508)
0.0 22.3 GO:0006468 protein phosphorylation(GO:0006468)
0.0 0.1 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.0 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.0 0.3 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.3 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.4 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.1 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.5 GO:2000008 protein localization to cell surface(GO:0034394) regulation of protein localization to cell surface(GO:2000008)
0.0 0.3 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.2 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.8 GO:0032506 cytokinesis by cell plate formation(GO:0000911) cytokinetic process(GO:0032506) mitotic cytokinetic process(GO:1902410)
0.0 1.5 GO:0006486 protein glycosylation(GO:0006486) macromolecule glycosylation(GO:0043413)
0.0 0.3 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.0 0.4 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.3 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.3 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.1 GO:0071258 cellular response to gravity(GO:0071258)
0.0 0.2 GO:0009641 shade avoidance(GO:0009641)
0.0 0.3 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.1 GO:0097437 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.0 0.2 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.3 GO:0008033 tRNA processing(GO:0008033)
0.0 0.1 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.0 0.1 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.1 GO:0098719 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.0 0.0 GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic(GO:0000291) exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay(GO:0043928)
0.0 0.3 GO:0016485 protein processing(GO:0016485)
0.0 0.2 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.6 GO:0006413 translational initiation(GO:0006413)
0.0 0.2 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.0 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.0 0.0 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.0 0.1 GO:0050667 transsulfuration(GO:0019346) homocysteine metabolic process(GO:0050667)
0.0 0.1 GO:0015706 nitrate transport(GO:0015706)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 1.5 GO:0016328 lateral plasma membrane(GO:0016328)
1.0 8.0 GO:0009538 photosystem I reaction center(GO:0009538)
1.0 2.9 GO:0030093 chloroplast photosystem I(GO:0030093)
0.7 2.0 GO:0043673 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.6 27.0 GO:0010319 stromule(GO:0010319)
0.6 18.9 GO:0009523 photosystem II(GO:0009523)
0.4 2.6 GO:0005787 signal peptidase complex(GO:0005787)
0.4 1.9 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.4 3.5 GO:0016272 prefoldin complex(GO:0016272)
0.3 2.5 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.3 1.5 GO:0005719 nuclear euchromatin(GO:0005719)
0.3 7.4 GO:0009574 preprophase band(GO:0009574)
0.3 1.5 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.3 15.1 GO:0010287 plastoglobule(GO:0010287)
0.3 20.2 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.3 3.4 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.3 1.1 GO:0042788 polysomal ribosome(GO:0042788)
0.3 0.6 GO:0031227 intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.3 3.2 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.3 7.2 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.3 5.1 GO:0009508 plastid chromosome(GO:0009508)
0.2 1.5 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.2 70.2 GO:0009534 chloroplast thylakoid(GO:0009534)
0.2 1.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.2 0.7 GO:0032432 actin filament bundle(GO:0032432)
0.2 0.5 GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network(GO:0042175)
0.2 1.8 GO:0000922 spindle pole(GO:0000922)
0.2 1.6 GO:0030893 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 0.6 GO:0097361 CIA complex(GO:0097361)
0.2 0.5 GO:0005960 glycine cleavage complex(GO:0005960)
0.2 0.5 GO:0070847 core mediator complex(GO:0070847)
0.2 0.7 GO:0032807 DNA ligase IV complex(GO:0032807)
0.2 0.7 GO:0032044 DSIF complex(GO:0032044)
0.2 1.0 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.2 3.1 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.2 0.6 GO:0000811 GINS complex(GO:0000811)
0.2 3.5 GO:0005761 mitochondrial ribosome(GO:0005761) mitochondrial large ribosomal subunit(GO:0005762)
0.1 0.3 GO:0055037 recycling endosome(GO:0055037)
0.1 1.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 35.0 GO:0048046 apoplast(GO:0048046)
0.1 9.3 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 2.4 GO:0000178 exosome (RNase complex)(GO:0000178)
0.1 1.5 GO:0045298 tubulin complex(GO:0045298)
0.1 35.3 GO:0005802 trans-Golgi network(GO:0005802)
0.1 2.6 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 1.2 GO:0010168 ER body(GO:0010168)
0.1 0.1 GO:0031021 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274) interphase microtubule organizing center(GO:0031021)
0.1 20.7 GO:0009505 plant-type cell wall(GO:0009505)
0.1 0.8 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 1.6 GO:0009986 cell surface(GO:0009986)
0.1 0.6 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.1 0.7 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 0.7 GO:0000813 ESCRT I complex(GO:0000813)
0.1 0.9 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 42.2 GO:0009570 chloroplast stroma(GO:0009570)
0.1 0.3 GO:0030689 Noc complex(GO:0030689)
0.1 0.3 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 2.3 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.1 1.8 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.6 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 1.3 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 2.1 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.6 GO:0035619 root hair tip(GO:0035619)
0.1 0.9 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 0.8 GO:0042555 MCM complex(GO:0042555)
0.1 0.9 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 0.4 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.1 0.7 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.1 0.4 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.1 18.6 GO:0044434 chloroplast part(GO:0044434)
0.1 1.2 GO:0097346 INO80-type complex(GO:0097346)
0.1 0.2 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.3 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.1 GO:0000938 GARP complex(GO:0000938)
0.1 0.2 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.1 0.4 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.1 0.6 GO:0005682 U5 snRNP(GO:0005682)
0.1 0.6 GO:0032300 mismatch repair complex(GO:0032300)
0.1 6.5 GO:0005840 ribosome(GO:0005840)
0.0 0.3 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 4.6 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.3 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.3 GO:0070552 BRISC complex(GO:0070552)
0.0 1.1 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 159.2 GO:0009536 plastid(GO:0009536)
0.0 2.2 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 3.8 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 2.8 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.3 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.7 GO:0005871 kinesin complex(GO:0005871)
0.0 18.6 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.5 GO:0005686 U2 snRNP(GO:0005686)
0.0 2.5 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.6 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.4 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.8 GO:0000139 Golgi membrane(GO:0000139)
0.0 0.2 GO:0030125 clathrin vesicle coat(GO:0030125) clathrin-coated vesicle membrane(GO:0030665)
0.0 0.2 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.1 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.0 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 0.1 GO:0090404 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.3 6.8 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
1.8 10.8 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
1.3 4.0 GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
1.3 5.1 GO:0019156 isoamylase activity(GO:0019156)
1.2 4.8 GO:0030410 nicotianamine synthase activity(GO:0030410)
1.2 3.6 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
1.0 2.1 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
1.0 9.4 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
1.0 3.1 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
1.0 2.9 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.9 2.8 GO:0030275 LRR domain binding(GO:0030275)
0.9 3.7 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.9 2.7 GO:0008311 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.9 2.7 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.8 5.0 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.8 11.6 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.8 4.0 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.8 3.9 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.7 2.8 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.7 3.5 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.7 1.4 GO:0009884 cytokinin receptor activity(GO:0009884)
0.7 2.0 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.7 2.6 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.7 2.0 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.6 1.9 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.6 3.2 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.6 3.8 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.6 5.6 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.6 4.3 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.6 3.0 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.6 2.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.6 13.0 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.6 1.7 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.6 1.7 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.5 1.6 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.5 1.6 GO:0035671 enone reductase activity(GO:0035671)
0.5 1.6 GO:0019904 protein domain specific binding(GO:0019904)
0.5 1.6 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.5 1.5 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.5 16.0 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.5 2.5 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.5 1.5 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.5 12.7 GO:0016168 chlorophyll binding(GO:0016168)
0.5 2.4 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.5 2.3 GO:0010313 phytochrome binding(GO:0010313)
0.5 2.7 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.5 4.1 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.4 2.7 GO:0051723 protein methylesterase activity(GO:0051723)
0.4 14.1 GO:0008266 poly(U) RNA binding(GO:0008266)
0.4 1.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.4 3.0 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.4 2.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.4 4.2 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.4 2.9 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.4 2.1 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.4 2.5 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.4 2.8 GO:0016151 nickel cation binding(GO:0016151)
0.4 1.6 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.4 0.8 GO:0004645 phosphorylase activity(GO:0004645)
0.4 4.4 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.4 8.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.4 1.1 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.4 1.1 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.4 2.9 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.4 1.4 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.4 1.8 GO:0008430 selenium binding(GO:0008430)
0.4 3.2 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.4 1.4 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.3 1.4 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.3 1.7 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.3 0.7 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.3 2.7 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.3 1.0 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.3 1.0 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.3 4.1 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.3 1.2 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.3 1.9 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.3 1.5 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.3 2.5 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.3 4.0 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.3 0.9 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.3 1.8 GO:0003913 DNA photolyase activity(GO:0003913)
0.3 1.2 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.3 0.9 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.3 1.2 GO:0047493 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.3 1.8 GO:0043015 gamma-tubulin binding(GO:0043015)
0.3 2.1 GO:0032029 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.3 3.3 GO:0016161 beta-amylase activity(GO:0016161)
0.3 1.5 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.3 5.5 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.3 0.3 GO:0004325 ferrochelatase activity(GO:0004325)
0.3 2.0 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.3 0.8 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.3 1.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.3 6.6 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.3 4.1 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.3 1.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.3 10.5 GO:0008171 O-methyltransferase activity(GO:0008171)
0.3 0.8 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.3 0.8 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.3 0.8 GO:0008517 folic acid transporter activity(GO:0008517)
0.3 1.3 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.3 1.6 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.3 5.1 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.3 1.0 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.3 3.3 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.3 0.8 GO:0005344 oxygen transporter activity(GO:0005344)
0.3 1.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.3 4.3 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.2 0.7 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.2 0.7 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.2 1.5 GO:0005274 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.2 3.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.2 6.1 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 6.0 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.2 1.9 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.2 0.9 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.2 1.1 GO:0035197 siRNA binding(GO:0035197)
0.2 1.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 1.8 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 0.9 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.2 0.7 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 2.7 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.2 1.5 GO:0001653 peptide receptor activity(GO:0001653)
0.2 0.8 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.2 1.3 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.2 1.9 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.2 1.0 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.2 1.9 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.2 0.8 GO:0052596 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.2 0.8 GO:0015929 hexosaminidase activity(GO:0015929)
0.2 2.0 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.2 1.0 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.2 2.0 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.2 0.6 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.2 1.2 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.2 1.7 GO:0070568 guanylyltransferase activity(GO:0070568)
0.2 9.8 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.2 2.6 GO:0004177 aminopeptidase activity(GO:0004177)
0.2 1.1 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.2 5.5 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.2 10.9 GO:0043621 protein self-association(GO:0043621)
0.2 0.5 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.2 6.2 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.2 0.7 GO:0048030 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.2 0.7 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.2 4.1 GO:0008066 glutamate receptor activity(GO:0008066)
0.2 1.0 GO:0019137 thioglucosidase activity(GO:0019137)
0.2 1.5 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.2 0.7 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.2 1.8 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.2 0.2 GO:0097001 sphingolipid binding(GO:0046625) ceramide binding(GO:0097001)
0.2 2.7 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.2 0.7 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.2 1.8 GO:0008061 chitin binding(GO:0008061)
0.2 1.4 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.2 0.8 GO:0046870 cadmium ion binding(GO:0046870)
0.2 1.3 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.2 0.8 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.2 0.6 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.2 9.2 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.2 0.5 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.2 2.8 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.2 3.5 GO:0016773 phosphotransferase activity, alcohol group as acceptor(GO:0016773)
0.2 0.2 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.1 8.2 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.1 1.5 GO:0005496 steroid binding(GO:0005496)
0.1 0.6 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 2.8 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.1 0.6 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.1 0.6 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 0.9 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.7 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 1.3 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.1 1.1 GO:0010011 auxin binding(GO:0010011)
0.1 0.4 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.1 1.5 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 1.7 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 1.1 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.5 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.4 GO:0016842 amidine-lyase activity(GO:0016842)
0.1 2.1 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 1.0 GO:0008083 growth factor activity(GO:0008083)
0.1 2.4 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 0.5 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.1 1.1 GO:0004096 catalase activity(GO:0004096)
0.1 1.6 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.6 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 1.0 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 6.1 GO:0005319 lipid transporter activity(GO:0005319)
0.1 2.4 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 1.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 2.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.6 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.8 GO:0001671 ATPase activator activity(GO:0001671)
0.1 1.8 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 0.7 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 1.1 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 1.1 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.1 1.1 GO:0070569 uridylyltransferase activity(GO:0070569)
0.1 2.3 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 1.1 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 0.5 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.1 1.1 GO:0009378 four-way junction helicase activity(GO:0009378)
0.1 0.5 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 16.5 GO:0043531 ADP binding(GO:0043531)
0.1 0.3 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.9 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 1.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 24.8 GO:0003735 structural constituent of ribosome(GO:0003735)
0.1 2.3 GO:0009975 cyclase activity(GO:0009975)
0.1 0.9 GO:0031386 protein tag(GO:0031386)
0.1 0.4 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 0.8 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.1 0.4 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.1 0.4 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.1 0.3 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.8 GO:0097177 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.1 0.7 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 1.5 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.1 0.5 GO:0004594 pantothenate kinase activity(GO:0004594)
0.1 1.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 5.2 GO:0016866 intramolecular transferase activity(GO:0016866)
0.1 2.0 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.1 0.4 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 0.6 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.5 GO:0031177 phosphopantetheine binding(GO:0031177)
0.1 3.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 1.0 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 1.4 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.9 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 0.5 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 5.8 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144) carbohydrate transporter activity(GO:1901476)
0.1 0.5 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 0.6 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 0.6 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.3 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.3 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 0.6 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.9 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 4.1 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.1 0.1 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.1 1.1 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 1.5 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.4 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.4 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.1 3.3 GO:0005261 cation channel activity(GO:0005261)
0.1 0.4 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 0.6 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.1 5.4 GO:0003724 RNA helicase activity(GO:0003724)
0.1 2.2 GO:0051087 chaperone binding(GO:0051087)
0.1 3.4 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.1 0.3 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.1 0.2 GO:0016435 rRNA (guanine) methyltransferase activity(GO:0016435)
0.1 7.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 0.6 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 0.5 GO:0017136 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 3.4 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.1 0.2 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.1 12.1 GO:0004497 monooxygenase activity(GO:0004497)
0.1 0.2 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.1 0.2 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.1 0.2 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 0.3 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.7 GO:0001099 RNA polymerase II core binding(GO:0000993) basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.1 0.3 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.3 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.2 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 0.6 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 1.6 GO:0016597 amino acid binding(GO:0016597)
0.1 0.2 GO:0019202 amino acid kinase activity(GO:0019202)
0.1 0.9 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.2 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.0 0.4 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.0 0.3 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 0.4 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.3 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.0 0.3 GO:0005047 signal recognition particle binding(GO:0005047)
0.0 0.2 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.6 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 3.1 GO:0003697 single-stranded DNA binding(GO:0003697)
0.0 0.5 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.8 GO:0030276 clathrin binding(GO:0030276)
0.0 0.4 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.1 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.4 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.5 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.0 10.0 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.3 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 0.3 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 4.6 GO:0016741 transferase activity, transferring one-carbon groups(GO:0016741)
0.0 0.3 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.1 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661)
0.0 0.1 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.1 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.0 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.0 0.3 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.5 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.2 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 29.8 GO:0016301 kinase activity(GO:0016301)
0.0 0.2 GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756)
0.0 0.7 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.4 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.2 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 1.1 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 1.9 GO:0030246 carbohydrate binding(GO:0030246)
0.0 1.1 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.2 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 2.2 GO:0004519 endonuclease activity(GO:0004519)
0.0 1.2 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.9 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 12.1 GO:0044822 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 0.0 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.0 1.9 GO:0001012 RNA polymerase II regulatory region sequence-specific DNA binding(GO:0000977) RNA polymerase II regulatory region DNA binding(GO:0001012)
0.0 0.8 GO:0008320 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 0.2 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.2 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.4 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.0 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.8 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.3 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 0.1 GO:0016783 sulfurtransferase activity(GO:0016783)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 11.5 PID CMYB PATHWAY C-MYB transcription factor network
0.8 4.6 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.6 1.7 PID INTEGRIN1 PATHWAY Beta1 integrin cell surface interactions
0.4 1.1 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.3 1.2 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.3 2.6 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.3 0.5 PID AP1 PATHWAY AP-1 transcription factor network
0.2 2.2 PID E2F PATHWAY E2F transcription factor network
0.2 0.8 PID REELIN PATHWAY Reelin signaling pathway
0.2 0.6 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.2 0.7 PID ATM PATHWAY ATM pathway
0.1 1.1 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 0.1 PID EPO PATHWAY EPO signaling pathway
0.1 0.3 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.1 0.7 PID FANCONI PATHWAY Fanconi anemia pathway
0.1 0.2 PID SHP2 PATHWAY SHP2 signaling
0.0 0.2 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 0.1 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.2 6.5 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
2.1 12.6 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
1.1 3.4 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.4 1.3 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.4 1.1 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.3 1.6 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.3 0.8 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.3 1.1 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.3 1.4 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.2 0.4 REACTOME MITOTIC G2 G2 M PHASES Genes involved in Mitotic G2-G2/M phases
0.2 1.1 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.2 1.7 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.2 0.6 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.2 0.5 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.2 2.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 1.1 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.1 0.9 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF
0.1 0.2 REACTOME DOWNSTREAM SIGNALING OF ACTIVATED FGFR Genes involved in Downstream signaling of activated FGFR
0.1 2.6 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.1 1.2 REACTOME LATE PHASE OF HIV LIFE CYCLE Genes involved in Late Phase of HIV Life Cycle
0.1 0.3 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.5 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.1 0.5 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.1 0.2 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.1 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.1 0.2 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.0 0.3 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.0 REACTOME HIV LIFE CYCLE Genes involved in HIV Life Cycle