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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G37590

Z-value: 0.69

Transcription factors associated with AT2G37590

Gene Symbol Gene ID Gene Info
AT2G37590
AT2G37590 DNA binding with one finger 2.4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
DOF2.4arTal_v1_Chr2_+_15769086_15769086-0.311.0e-01Click!

Activity profile of AT2G37590 motif

Sorted Z-values of AT2G37590 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_4312103 3.31 AT2G10940.2
AT2G10940.1
AT2G10940
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_9072708 3.20 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
Chr2_-_16950705 3.08 AT2G40610.1
EXPA8
expansin A8
Chr4_-_18098633 2.98 AT4G38770.1
PRP4
proline-rich protein 4
Chr3_-_197974 2.62 AT3G01500.1
CA1
carbonic anhydrase 1
Chr1_-_29635931 2.61 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr1_-_24606722 2.61 AT1G66100.1
AT1G66100
Plant thionin
Chr3_-_198160 2.60 AT3G01500.2
CA1
carbonic anhydrase 1
Chr3_-_198664 2.58 AT3G01500.3
CA1
carbonic anhydrase 1
Chr5_-_9082384 2.57 AT5G26000.1
AT5G26000.2
TGG1
thioglucoside glucohydrolase 1
Chr4_-_17777445 2.55 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr3_-_197564 2.53 AT3G01500.4
CA1
carbonic anhydrase 1
Chr5_-_25343369 2.28 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
Chr2_+_14577083 2.28 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr5_-_19648362 2.27 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_28053030 2.25 AT1G74670.1
GASA6
Gibberellin-regulated family protein
Chr5_+_4757856 2.23 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr1_+_10375754 2.20 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_10375599 2.17 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_4394343 2.15 AT1G12900.3
AT1G12900.4
AT1G12900.1
AT1G12900.2
AT1G12900.5
GAPA-2
glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Chr3_-_21523375 2.14 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein
Chr5_-_15385247 2.12 AT5G38430.2
AT5G38430.1
RBCS1B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_+_625254 2.10 AT5G02760.1
AT5G02760
Protein phosphatase 2C family protein
Chr2_+_2763449 2.08 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr5_+_17760865 2.07 AT5G44130.1
FLA13
FASCICLIN-like arabinogalactan protein 13 precursor
Chr4_+_2449434 2.05 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr1_+_10371675 2.05 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_10475969 2.05 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
Chr1_+_27338034 2.05 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr3_-_16448844 2.04 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr5_+_4758921 2.01 AT5G14740.9
CA2
carbonic anhydrase 2
Chr2_+_16130290 1.98 AT2G38540.1
LP1
lipid transfer protein 1
Chr1_-_7531108 1.98 AT1G21500.1
AT1G21500
hypothetical protein
Chr2_-_11717432 1.96 AT2G27385.3
AT2G27385.2
AT2G27385.1
AT2G27385
Pollen Ole e 1 allergen and extensin family protein
Chr3_+_9524590 1.87 AT3G26060.1
AT3G26060.2
PRXQ
Thioredoxin superfamily protein
Chr1_+_26141726 1.86 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr3_+_9525465 1.84 AT3G26060.3
PRXQ
Thioredoxin superfamily protein
Chr1_-_6999839 1.82 AT1G20190.1
EXPA11
expansin 11
Chr1_-_26711462 1.77 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
Chr5_+_5237970 1.76 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
Chr5_-_18026077 1.76 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr2_-_15474717 1.76 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
Chr3_-_7557969 1.74 AT3G21460.1
AT3G21460
Glutaredoxin family protein
Chr5_-_8707885 1.74 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
Chr1_+_20447157 1.73 AT1G54820.1
AT1G54820.2
AT1G54820.3
AT1G54820.4
AT1G54820
Protein kinase superfamily protein
Chr5_+_3889906 1.71 AT5G12050.1
AT5G12050
rho GTPase-activating protein
Chr3_-_1860797 1.70 AT3G06145.1
AT3G06145
RING zinc finger protein
Chr3_-_4744263 1.70 AT3G14240.1
AT3G14240
Subtilase family protein
Chr1_-_6999523 1.69 AT1G20190.2
EXPA11
expansin 11
Chr2_-_12433796 1.69 AT2G28950.1
EXPA6
expansin A6
Chr2_+_8940833 1.69 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr5_+_18634041 1.67 AT5G45950.1
AT5G45950
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_7857933 1.66 AT4G13500.1
AT4G13500
transmembrane protein
Chr1_-_4530222 1.65 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr1_+_11532199 1.65 AT1G32060.1
PRK
phosphoribulokinase
Chr1_+_907523 1.64 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
Chr1_+_25574381 1.64 AT1G68238.1
AT1G68238
transmembrane protein
Chr5_+_7502427 1.64 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
Chr2_-_11727654 1.63 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
Chr2_+_15059763 1.63 AT2G35860.1
FLA16
FASCICLIN-like arabinogalactan protein 16 precursor
Chr4_-_12772438 1.63 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr3_+_251868 1.62 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
Chr4_-_69884 1.60 AT4G00165.2
AT4G00165.1
AT4G00165
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_17243583 1.60 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr1_-_11740399 1.60 AT1G32470.1
AT1G32470
Single hybrid motif superfamily protein
Chr5_-_4171954 1.58 AT5G13140.1
AT5G13140
Pollen Ole e 1 allergen and extensin family protein
Chr5_+_5238502 1.57 AT5G16030.5
AT5G16030
mental retardation GTPase activating protein
Chr3_-_6882235 1.57 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Chr2_+_13647699 1.57 AT2G32100.1
OFP16
ovate family protein 16
Chr3_-_17337733 1.56 AT3G47070.1
AT3G47070
thylakoid soluble phosphoprotein
Chr1_-_26468703 1.56 AT1G70280.1
AT1G70280.2
AT1G70280
NHL domain-containing protein
Chr5_-_25373904 1.55 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
Chr5_-_8916856 1.55 AT5G25610.1
RD22
BURP domain-containing protein
Chr3_+_6180621 1.55 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr1_-_9251659 1.52 AT1G26761.1
AT1G26761
Arabinanase/levansucrase/invertase
Chr3_+_23345754 1.51 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr4_-_16583075 1.50 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr3_+_8586359 1.50 AT3G23805.1
RALFL24
ralf-like 24
Chr1_+_26687202 1.49 AT1G70760.1
NdhL
inorganic carbon transport protein-like protein
Chr3_-_8589754 1.49 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr3_-_20515392 1.49 AT3G55330.1
PPL1
PsbP-like protein 1
Chr4_+_493546 1.49 AT4G01150.1
AT4G01150.2
AT4G01150
CURVATURE THYLAKOID 1A-like protein
Chr4_+_620691 1.47 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_8338032 1.47 AT5G24420.1
PGL5
6-phosphogluconolactonase 5
Chr5_+_16468327 1.47 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
Chr1_+_5058583 1.47 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr1_-_84864 1.46 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr2_-_15790139 1.45 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr3_+_18049571 1.44 AT3G48730.1
GSA2
glutamate-1-semialdehyde 2,1-aminomutase 2
Chr4_-_13398307 1.44 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr1_-_4265156 1.43 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr2_-_15789605 1.43 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr3_-_19595834 1.43 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr2_-_8971339 1.43 AT2G20835.1
AT2G20835
hypothetical protein
Chr3_-_2334185 1.42 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr1_-_20803449 1.41 AT1G55670.1
PSAG
photosystem I subunit G
Chr5_-_20712386 1.41 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_+_19191247 1.41 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr1_+_4899045 1.40 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
Chr3_+_18262290 1.40 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
Chr4_+_15401640 1.40 AT4G31840.1
ENODL15
early nodulin-like protein 15
Chr3_+_2717557 1.40 AT3G08940.2
AT3G08940.1
LHCB4.2
light harvesting complex photosystem II
Chr3_+_17929581 1.39 AT3G48420.1
AT3G48420
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_+_3698658 1.39 AT3G11700.1
FLA18
FASCICLIN-like arabinogalactan protein 18 precursor
Chr1_+_7252111 1.39 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr3_-_2130451 1.39 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr1_-_28603932 1.39 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr3_+_21076505 1.38 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
Chr4_+_7531141 1.38 AT4G12830.1
AT4G12830
alpha/beta-Hydrolases superfamily protein
Chr1_-_23956260 1.38 AT1G64510.1
AT1G64510.2
AT1G64510
Translation elongation factor EF1B/ribosomal protein S6 family protein
Chr4_-_7591259 1.37 AT4G12980.1
AT4G12980
Auxin-responsive family protein
Chr1_-_6940832 1.37 AT1G20010.1
TUB5
tubulin beta-5 chain
Chr5_-_24990331 1.37 AT5G62220.1
GT18
glycosyltransferase 18
Chr2_+_266559 1.37 AT2G01590.1
AT2G01590.2
CRR3
chlororespiratory reduction 3
Chr5_+_21582614 1.37 AT5G53200.1
TRY
Homeodomain-like superfamily protein
Chr1_-_29485389 1.36 AT1G78370.1
GSTU20
glutathione S-transferase TAU 20
Chr3_-_19467455 1.36 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr2_+_14733975 1.36 AT2G34925.1
CLE42
CLAVATA3/ESR-RELATED 42
Chr1_-_26515188 1.36 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr3_-_19541284 1.35 AT3G52720.4
AT3G52720.2
ACA1
alpha carbonic anhydrase 1
Chr3_+_3857780 1.35 AT3G12110.1
ACT11
actin-11
Chr3_-_3277930 1.35 AT3G10520.1
HB2
hemoglobin 2
Chr5_-_21068327 1.35 AT5G51820.1
PGM
phosphoglucomutase
Chr4_-_17355891 1.35 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr2_-_1824480 1.35 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
Chr5_-_6842946 1.35 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr1_+_28428671 1.34 AT1G75710.1
AT1G75710
C2H2-like zinc finger protein
Chr3_-_19542160 1.33 AT3G52720.3
AT3G52720.1
ACA1
alpha carbonic anhydrase 1
Chr5_+_152446 1.33 AT5G01370.1
ACI1
ALC-interacting protein 1
Chr3_+_10017321 1.33 AT3G27160.1
AT3G27160.2
GHS1
Ribosomal protein S21 family protein
Chr3_+_2564153 1.33 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr5_+_17937622 1.33 AT5G44530.3
AT5G44530.2
AT5G44530.1
AT5G44530
Subtilase family protein
Chr3_+_2563803 1.33 AT3G08030.1
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr3_-_17495033 1.32 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
Chr5_+_4944816 1.32 AT5G15230.1
GASA4
GAST1 protein homolog 4
Chr1_-_227302 1.32 AT1G01620.2
PIP1C
plasma membrane intrinsic protein 1C
Chr3_+_188321 1.32 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr1_-_227543 1.32 AT1G01620.1
PIP1C
plasma membrane intrinsic protein 1C
Chr1_+_24647121 1.32 AT1G66180.1
AT1G66180
Eukaryotic aspartyl protease family protein
Chr1_+_2047886 1.31 AT1G06680.2
PSBP-1
photosystem II subunit P-1
Chr1_+_2047634 1.31 AT1G06680.1
PSBP-1
photosystem II subunit P-1
Chr5_+_24494291 1.31 AT5G60890.1
MYB34
myb domain protein 34
Chr1_+_7696427 1.31 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
Chr1_-_21614169 1.31 AT1G58270.1
ZW9
TRAF-like family protein
Chr1_-_15607966 1.31 AT1G41830.1
SKS6
SKU5-similar 6
Chr4_+_16810482 1.31 AT4G35350.2
AT4G35350.1
XCP1
xylem cysteine peptidase 1
Chr1_-_2560432 1.30 AT1G08160.1
AT1G08160
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_+_22444307 1.30 AT1G60950.1
FED A
2Fe-2S ferredoxin-like superfamily protein
Chr5_-_3190321 1.29 AT5G10170.1
MIPS3
myo-inositol-1-phosphate synthase 3
Chr1_+_23911024 1.29 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr4_+_15819489 1.28 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr3_-_15617149 1.28 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_990630 1.28 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
Chr3_-_4063306 1.28 AT3G12780.1
PGK1
phosphoglycerate kinase 1
Chr5_-_19899301 1.28 AT5G49100.1
AT5G49100
vitellogenin-like protein
Chr3_-_373805 1.27 AT3G02110.1
scpl25
serine carboxypeptidase-like 25
Chr5_+_22530007 1.27 AT5G55620.1
AT5G55620
hypothetical protein
Chr4_+_13177356 1.27 AT4G25960.1
ABCB2
P-glycoprotein 2
Chr3_-_15617309 1.27 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_19845097 1.26 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
Chr5_-_7419335 1.26 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr2_-_16908152 1.26 AT2G40475.1
ASG8
hypothetical protein
Chr1_+_4868346 1.26 AT1G14250.1
AT1G14250
GDA1/CD39 nucleoside phosphatase family protein
Chr4_+_11202728 1.26 AT4G20940.1
GHR1
Leucine-rich receptor-like protein kinase family protein
Chr3_-_20903080 1.26 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
Chr3_-_19553092 1.26 AT3G52750.3
AT3G52750.1
AT3G52750.4
FTSZ2-2
Tubulin/FtsZ family protein
Chr2_-_14302496 1.25 AT2G33800.1
EMB3113
Ribosomal protein S5 family protein
Chr1_+_25374072 1.25 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
Chr1_-_3880391 1.25 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr5_+_18530834 1.25 AT5G45680.1
FKBP13
FK506-binding protein 13
Chr4_+_160643 1.25 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr2_-_7496292 1.25 AT2G17230.1
EXL5
EXORDIUM like 5
Chr5_+_18945543 1.25 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
Chr1_-_23137254 1.25 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_14891041 1.25 AT2G35370.1
GDCH
glycine decarboxylase complex H
Chr2_+_14216771 1.25 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr4_-_13943732 1.24 AT4G28050.1
TET7
tetraspanin7
Chr1_-_30041952 1.23 AT1G79850.1
RPS17
ribosomal protein S17
Chr1_+_12026936 1.23 AT1G33170.1
AT1G33170
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_1231452 1.23 AT1G04520.1
PDLP2
plasmodesmata-located protein 2
Chr3_+_18973126 1.23 AT3G51080.1
GATA6
GATA transcription factor 6
Chr2_+_13940187 1.23 AT2G32860.2
AT2G32860.1
BGLU33
beta glucosidase 33
Chr4_-_16384468 1.22 AT4G34220.1
AT4G34220
Leucine-rich repeat protein kinase family protein
Chr5_-_5072492 1.22 AT5G15580.1
LNG1
longifolia1
Chr4_+_10651744 1.22 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
Chr5_+_1952505 1.22 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
Chr3_-_7187521 1.22 AT3G20570.1
ENODL9
early nodulin-like protein 9
Chr2_-_19563960 1.22 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr4_-_7316871 1.22 AT4G12320.1
CYP706A6
cytochrome P450, family 706, subfamily A, polypeptide 6
Chr4_+_14677661 1.22 AT4G30020.2
AT4G30020.3
AT4G30020
PA-domain containing subtilase family protein
Chr1_-_6283348 1.21 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
Chr5_-_18371021 1.21 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr4_-_11885533 1.21 AT4G22570.2
AT4G22570.1
APT3
adenine phosphoribosyl transferase 3
Chr1_+_11955656 1.21 AT1G32990.1
PRPL11
plastid ribosomal protein l11
Chr1_-_30113489 1.20 AT1G80050.2
APT2
adenine phosphoribosyl transferase 2
Chr2_-_12277417 1.20 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr4_-_7353117 1.20 AT4G12420.1
AT4G12420.2
SKU5
Cupredoxin superfamily protein
Chr1_+_11396402 1.20 AT1G31800.1
CYP97A3
cytochrome P450, family 97, subfamily A, polypeptide 3
Chr5_+_5078200 1.19 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr4_-_17181261 1.19 AT4G36360.2
BGAL3
beta-galactosidase 3

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G37590

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 11.6 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.8 15.0 GO:0006949 syncytium formation(GO:0006949)
0.7 0.7 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.7 2.7 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.7 2.0 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.7 2.6 GO:0010480 microsporocyte differentiation(GO:0010480)
0.6 3.0 GO:0042550 photosystem I stabilization(GO:0042550)
0.6 1.7 GO:0001894 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.6 1.7 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.6 4.0 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.6 0.6 GO:0060919 auxin influx(GO:0060919)
0.5 0.5 GO:0032409 regulation of transporter activity(GO:0032409)
0.5 2.1 GO:0015669 gas transport(GO:0015669)
0.5 3.7 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.5 1.5 GO:0010541 acropetal auxin transport(GO:0010541)
0.5 4.9 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.5 1.4 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.5 2.3 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.5 2.3 GO:0046713 borate transport(GO:0046713)
0.4 3.1 GO:0010067 procambium histogenesis(GO:0010067)
0.4 4.0 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.4 2.6 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.4 1.3 GO:0045981 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.4 0.8 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.4 0.4 GO:0006824 cobalt ion transport(GO:0006824)
0.4 1.3 GO:0071485 cellular response to absence of light(GO:0071485)
0.4 1.2 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.4 3.7 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.4 0.8 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.4 0.4 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.4 1.2 GO:0035017 cuticle pattern formation(GO:0035017)
0.4 1.5 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.4 0.7 GO:0048533 sporocyte differentiation(GO:0048533)
0.3 4.2 GO:0019685 photosynthesis, dark reaction(GO:0019685)
0.3 1.0 GO:1903890 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.3 1.4 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.3 2.3 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.3 1.7 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.3 0.3 GO:0010451 floral meristem growth(GO:0010451)
0.3 1.3 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.3 0.3 GO:0046084 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.3 2.6 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.3 1.6 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.3 1.9 GO:0048629 trichome patterning(GO:0048629)
0.3 2.3 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.3 3.2 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.3 2.5 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.3 1.6 GO:0006106 fumarate metabolic process(GO:0006106)
0.3 2.8 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.3 2.1 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.3 0.9 GO:0090058 metaxylem development(GO:0090058)
0.3 0.6 GO:0009915 phloem sucrose loading(GO:0009915)
0.3 2.0 GO:0015837 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.3 0.6 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.3 6.6 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.3 6.9 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.3 0.8 GO:0048255 mRNA stabilization(GO:0048255)
0.3 1.6 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.3 0.8 GO:0080145 cysteine homeostasis(GO:0080145)
0.3 0.8 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.3 1.3 GO:0010450 inflorescence meristem growth(GO:0010450)
0.3 1.3 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.3 2.1 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.3 1.0 GO:0050878 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.3 4.9 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.3 1.3 GO:0005980 glycogen catabolic process(GO:0005980)
0.3 1.0 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.2 1.5 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 2.2 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.2 1.2 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.2 1.0 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 2.9 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.2 2.4 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.2 3.1 GO:0032544 plastid translation(GO:0032544)
0.2 2.4 GO:0015976 carbon utilization(GO:0015976)
0.2 0.7 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.2 0.9 GO:0090342 regulation of cell aging(GO:0090342)
0.2 16.9 GO:0007018 microtubule-based movement(GO:0007018)
0.2 0.7 GO:0071457 cellular response to ozone(GO:0071457)
0.2 0.7 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 0.7 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.2 0.9 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.2 1.1 GO:0042549 photosystem II stabilization(GO:0042549)
0.2 1.4 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.2 0.2 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 1.3 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.2 0.9 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.2 0.7 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 0.7 GO:0098609 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.2 0.7 GO:1903889 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of cell fate commitment(GO:0010454) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.2 0.6 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.2 0.2 GO:0010433 bract development(GO:0010432) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.2 0.6 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.2 3.4 GO:0010315 auxin efflux(GO:0010315)
0.2 0.2 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.2 1.7 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.2 0.8 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.2 0.2 GO:0046655 folic acid metabolic process(GO:0046655)
0.2 1.4 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.2 12.7 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.2 2.0 GO:0010052 guard cell differentiation(GO:0010052)
0.2 5.5 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.2 0.8 GO:0019499 cyanide metabolic process(GO:0019499)
0.2 1.6 GO:0009078 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.2 2.6 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.2 0.6 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.2 0.8 GO:0015959 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.2 0.4 GO:0042539 hypotonic salinity response(GO:0042539)
0.2 1.0 GO:0046086 purine ribonucleoside salvage(GO:0006166) adenosine salvage(GO:0006169) adenosine biosynthetic process(GO:0046086)
0.2 0.4 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.2 0.6 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.2 0.2 GO:0006750 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.2 1.8 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.2 1.0 GO:0033206 meiotic cytokinesis(GO:0033206)
0.2 0.6 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.2 0.6 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 0.4 GO:0060631 regulation of meiosis I(GO:0060631)
0.2 1.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.2 2.9 GO:0046501 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.2 1.0 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.2 1.1 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.2 0.6 GO:0033194 response to hydroperoxide(GO:0033194)
0.2 2.1 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.2 2.2 GO:0007143 female meiotic division(GO:0007143)
0.2 1.7 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.2 0.6 GO:0070212 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.2 1.3 GO:0006021 inositol biosynthetic process(GO:0006021)
0.2 1.5 GO:0009643 photosynthetic acclimation(GO:0009643)
0.2 0.5 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 0.4 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.2 1.8 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.2 2.8 GO:0048564 photosystem I assembly(GO:0048564)
0.2 0.5 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.2 1.7 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.2 0.5 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 0.9 GO:0000084 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.2 0.7 GO:0043489 RNA stabilization(GO:0043489)
0.2 1.4 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.2 1.2 GO:0009099 valine biosynthetic process(GO:0009099)
0.2 2.5 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.2 0.7 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.2 2.3 GO:0010274 hydrotropism(GO:0010274)
0.2 0.5 GO:0042407 mitochondrial protein processing(GO:0034982) cristae formation(GO:0042407)
0.2 4.0 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.2 0.8 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.2 1.6 GO:0010206 photosystem II repair(GO:0010206)
0.2 0.8 GO:0071715 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.2 4.8 GO:0006730 one-carbon metabolic process(GO:0006730)
0.2 0.8 GO:0010226 response to lithium ion(GO:0010226)
0.2 0.8 GO:0035627 ceramide transport(GO:0035627)
0.2 0.5 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.2 0.5 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.2 0.2 GO:0051101 regulation of DNA binding(GO:0051101)
0.2 1.4 GO:0071249 cellular response to nitrate(GO:0071249)
0.2 0.6 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.2 0.2 GO:0031109 microtubule polymerization or depolymerization(GO:0031109)
0.2 0.6 GO:0000023 maltose metabolic process(GO:0000023)
0.2 0.6 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.2 2.9 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.2 0.9 GO:0031507 heterochromatin assembly(GO:0031507)
0.2 0.3 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.2 0.5 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.1 4.2 GO:0042335 cuticle development(GO:0042335)
0.1 7.0 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.9 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.1 1.3 GO:0010088 phloem development(GO:0010088)
0.1 0.4 GO:0090549 response to carbon starvation(GO:0090549)
0.1 0.6 GO:0051211 anisotropic cell growth(GO:0051211)
0.1 0.7 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 1.3 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 1.4 GO:0030497 fatty acid elongation(GO:0030497)
0.1 1.0 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 0.9 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 1.0 GO:0010155 regulation of proton transport(GO:0010155)
0.1 0.4 GO:0080119 ER body organization(GO:0080119)
0.1 0.7 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.1 0.8 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.4 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.1 0.6 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.1 3.6 GO:0008360 regulation of cell shape(GO:0008360)
0.1 0.7 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.1 2.2 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.4 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.1 0.5 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.4 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 2.1 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.1 GO:1902932 positive regulation of alcohol biosynthetic process(GO:1902932)
0.1 2.0 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.5 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 1.4 GO:0051814 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 0.3 GO:1990937 xylan acetylation(GO:1990937)
0.1 5.2 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 0.5 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.1 0.6 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 0.3 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.1 0.6 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.1 0.8 GO:0097502 mannosylation(GO:0097502)
0.1 0.9 GO:0080117 secondary growth(GO:0080117)
0.1 0.4 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 2.6 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.6 GO:0045005 DNA-dependent DNA replication maintenance of fidelity(GO:0045005)
0.1 7.0 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.1 1.2 GO:0007140 male meiosis(GO:0007140)
0.1 0.4 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 10.2 GO:0045490 pectin catabolic process(GO:0045490)
0.1 0.4 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.1 1.0 GO:0051294 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 2.5 GO:0045493 xylan catabolic process(GO:0045493)
0.1 1.4 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 1.1 GO:0046785 microtubule polymerization(GO:0046785)
0.1 3.3 GO:0006284 base-excision repair(GO:0006284)
0.1 1.5 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 0.2 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.1 2.0 GO:0010215 cellulose microfibril organization(GO:0010215)
0.1 0.2 GO:0071668 cell wall assembly(GO:0070726) plant-type cell wall assembly(GO:0071668)
0.1 0.8 GO:0070828 heterochromatin organization(GO:0070828)
0.1 3.4 GO:0016129 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.1 0.4 GO:0015739 sialic acid transport(GO:0015739)
0.1 0.7 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.3 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.2 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 0.8 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.1 1.0 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.4 GO:0015675 nickel cation transport(GO:0015675)
0.1 0.7 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.1 0.5 GO:0009590 detection of gravity(GO:0009590)
0.1 0.2 GO:0007032 endosome organization(GO:0007032)
0.1 1.7 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 0.3 GO:0010338 leaf formation(GO:0010338)
0.1 0.6 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 0.4 GO:0032418 lysosome localization(GO:0032418)
0.1 0.3 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 2.1 GO:0051225 spindle assembly(GO:0051225)
0.1 0.6 GO:0071514 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.1 2.6 GO:0065001 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.2 GO:0060359 response to ammonium ion(GO:0060359)
0.1 0.8 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 1.0 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.1 0.7 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.4 GO:0036065 fucosylation(GO:0036065)
0.1 1.6 GO:0010166 wax metabolic process(GO:0010166)
0.1 1.4 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 0.5 GO:0018874 benzoate metabolic process(GO:0018874)
0.1 0.2 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 0.4 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.1 0.3 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 0.6 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 0.4 GO:0052018 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.1 0.4 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.1 2.8 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.1 0.3 GO:0055089 fatty acid homeostasis(GO:0055089)
0.1 1.1 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.4 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 1.7 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.1 0.9 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 0.3 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 7.4 GO:0015979 photosynthesis(GO:0015979)
0.1 1.3 GO:0033559 unsaturated fatty acid metabolic process(GO:0033559)
0.1 0.3 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.1 0.4 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 1.1 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 2.3 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.8 GO:0019750 chloroplast localization(GO:0019750) plastid localization(GO:0051644)
0.1 0.5 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.2 GO:0046125 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.1 0.5 GO:0016572 histone phosphorylation(GO:0016572)
0.1 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 0.2 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 0.5 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 0.6 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.1 2.0 GO:0009958 positive gravitropism(GO:0009958)
0.1 0.2 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.8 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 1.1 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 0.7 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 0.5 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.1 0.6 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.5 GO:0007021 tubulin complex assembly(GO:0007021)
0.1 1.0 GO:0044070 regulation of anion transport(GO:0044070)
0.1 1.9 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 1.3 GO:0080022 primary root development(GO:0080022)
0.1 0.6 GO:0009635 response to herbicide(GO:0009635)
0.1 0.3 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.1 0.2 GO:0006883 cellular sodium ion homeostasis(GO:0006883)
0.1 0.2 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.1 0.3 GO:0030322 stabilization of membrane potential(GO:0030322)
0.1 0.3 GO:2000014 regulation of endosperm development(GO:2000014)
0.1 0.8 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.1 0.6 GO:0046471 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.1 2.0 GO:0035825 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.1 0.2 GO:0032012 Ras protein signal transduction(GO:0007265) ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012) regulation of Ras protein signal transduction(GO:0046578) regulation of small GTPase mediated signal transduction(GO:0051056)
0.1 0.9 GO:0010584 pollen exine formation(GO:0010584)
0.1 0.2 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 0.8 GO:0015743 malate transport(GO:0015743)
0.1 0.2 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.1 0.2 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.1 0.2 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.1 0.1 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 1.0 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.1 1.5 GO:0010075 regulation of meristem growth(GO:0010075)
0.1 0.2 GO:0009305 protein biotinylation(GO:0009305)
0.1 0.4 GO:0048830 adventitious root development(GO:0048830)
0.1 0.8 GO:0048829 root cap development(GO:0048829)
0.1 0.2 GO:0016120 carotene biosynthetic process(GO:0016120)
0.1 0.7 GO:0070475 rRNA base methylation(GO:0070475)
0.1 0.2 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414) mitochondrial tRNA processing(GO:0090646)
0.1 0.9 GO:0046348 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.4 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.5 GO:0071585 detoxification of cadmium ion(GO:0071585) stress response to cadmium ion(GO:1990170)
0.1 4.1 GO:0045454 cell redox homeostasis(GO:0045454)
0.1 0.2 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 0.1 GO:0030104 water homeostasis(GO:0030104)
0.1 0.6 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.1 0.2 GO:0043132 NAD transport(GO:0043132)
0.1 0.8 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 1.0 GO:0050821 protein stabilization(GO:0050821)
0.1 0.5 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 0.3 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.5 GO:0009452 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.1 0.1 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.1 0.6 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.1 1.5 GO:0099515 actin filament-based transport(GO:0099515)
0.1 1.1 GO:0006817 phosphate ion transport(GO:0006817)
0.1 0.3 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.5 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 0.3 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 0.2 GO:0051289 protein homotetramerization(GO:0051289)
0.1 0.4 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.1 0.5 GO:0036297 interstrand cross-link repair(GO:0036297)
0.1 0.8 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 0.8 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 2.0 GO:0048825 cotyledon development(GO:0048825)
0.1 0.5 GO:0019252 starch biosynthetic process(GO:0019252)
0.1 0.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.7 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.4 GO:0010496 intercellular transport(GO:0010496)
0.0 0.6 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.1 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.0 0.2 GO:0046209 nitric oxide metabolic process(GO:0046209)
0.0 1.9 GO:0010102 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 0.3 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.6 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.5 GO:0006265 DNA topological change(GO:0006265)
0.0 1.3 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.8 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.4 GO:1902025 nitrate import(GO:1902025)
0.0 0.4 GO:0009641 shade avoidance(GO:0009641)
0.0 0.3 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.1 GO:0010028 xanthophyll cycle(GO:0010028)
0.0 0.6 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.1 GO:0010045 response to nickel cation(GO:0010045)
0.0 1.3 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 1.3 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.3 GO:0006308 DNA catabolic process(GO:0006308)
0.0 2.8 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.4 GO:0016553 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.0 0.9 GO:0080155 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.0 0.7 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.5 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.2 GO:0006788 heme oxidation(GO:0006788)
0.0 0.5 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.5 GO:0001709 cell fate determination(GO:0001709)
0.0 0.1 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 0.2 GO:0010098 suspensor development(GO:0010098)
0.0 0.4 GO:0032042 mitochondrial DNA metabolic process(GO:0032042)
0.0 0.4 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.5 GO:0009750 response to fructose(GO:0009750)
0.0 0.6 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.3 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.4 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.1 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.5 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.0 2.5 GO:0006869 lipid transport(GO:0006869)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.1 GO:0019695 choline metabolic process(GO:0019695)
0.0 0.4 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.4 GO:0051784 negative regulation of mitotic nuclear division(GO:0045839) negative regulation of nuclear division(GO:0051784)
0.0 0.0 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.0 0.7 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.3 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.1 GO:0006273 lagging strand elongation(GO:0006273)
0.0 0.2 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.3 GO:0009405 pathogenesis(GO:0009405)
0.0 0.2 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.8 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.0 0.2 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.9 GO:0009566 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.1 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.0 0.3 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.2 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.0 0.1 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.0 0.1 GO:0071486 cellular response to high light intensity(GO:0071486)
0.0 0.2 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.1 GO:0006425 glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.7 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.0 0.2 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.0 0.4 GO:0010091 trichome branching(GO:0010091)
0.0 0.1 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.0 0.0 GO:0080051 cutin transport(GO:0080051)
0.0 0.1 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.1 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.2 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.2 GO:0052543 callose deposition in cell wall(GO:0052543)
0.0 0.0 GO:0010959 regulation of metal ion transport(GO:0010959)
0.0 0.2 GO:0009704 de-etiolation(GO:0009704)
0.0 0.6 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.4 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.3 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.1 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 1.5 GO:0009860 pollen tube growth(GO:0009860)
0.0 0.1 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.0 0.2 GO:0007009 plasma membrane organization(GO:0007009)
0.0 0.4 GO:0009838 abscission(GO:0009838)
0.0 0.0 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.0 0.1 GO:0080156 mitochondrial mRNA modification(GO:0080156) mitochondrial RNA modification(GO:1900864)
0.0 0.2 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.2 GO:0030071 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.0 0.2 GO:0052542 defense response by callose deposition(GO:0052542)
0.0 0.1 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.0 0.4 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.0 GO:0051639 actin filament network formation(GO:0051639)
0.0 0.7 GO:0007017 microtubule-based process(GO:0007017)
0.0 0.1 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 0.2 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.2 GO:0010257 NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.0 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.0 0.4 GO:0071555 cell wall organization(GO:0071555)
0.0 0.0 GO:0048451 petal formation(GO:0048451)
0.0 0.1 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.1 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.1 GO:0031333 negative regulation of protein complex assembly(GO:0031333)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 6.5 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.8 4.0 GO:0005960 glycine cleavage complex(GO:0005960)
0.7 2.2 GO:0043667 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.7 0.7 GO:0016328 lateral plasma membrane(GO:0016328)
0.5 1.4 GO:0030093 chloroplast photosystem I(GO:0030093)
0.4 17.7 GO:0010319 stromule(GO:0010319)
0.4 1.2 GO:0031977 thylakoid lumen(GO:0031977)
0.3 1.3 GO:0016461 unconventional myosin complex(GO:0016461)
0.3 1.3 GO:0044420 extracellular matrix component(GO:0044420)
0.3 1.8 GO:0009360 DNA polymerase III complex(GO:0009360)
0.2 6.2 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.2 1.2 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.2 5.6 GO:0005871 kinesin complex(GO:0005871)
0.2 0.9 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 3.7 GO:0009531 secondary cell wall(GO:0009531)
0.2 2.8 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.2 2.0 GO:0042555 MCM complex(GO:0042555)
0.2 1.6 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.2 1.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.2 1.0 GO:0009897 external side of plasma membrane(GO:0009897)
0.2 2.6 GO:0009986 cell surface(GO:0009986)
0.2 2.9 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.2 1.2 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.2 59.4 GO:0009534 chloroplast thylakoid(GO:0009534)
0.2 26.7 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.2 1.0 GO:0009346 citrate lyase complex(GO:0009346)
0.2 0.7 GO:0005828 kinetochore microtubule(GO:0005828)
0.2 0.7 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.2 10.2 GO:0009579 thylakoid(GO:0009579)
0.2 0.8 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 0.6 GO:0032807 DNA ligase IV complex(GO:0032807)
0.2 4.8 GO:0005875 microtubule associated complex(GO:0005875)
0.2 2.2 GO:0005880 nuclear microtubule(GO:0005880)
0.1 3.1 GO:0009574 preprophase band(GO:0009574)
0.1 0.4 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.6 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.4 GO:0045495 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 0.8 GO:0000796 condensin complex(GO:0000796)
0.1 1.8 GO:0045298 tubulin complex(GO:0045298)
0.1 0.5 GO:0009513 etioplast(GO:0009513)
0.1 0.3 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.5 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 5.2 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 0.5 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.1 0.2 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 1.2 GO:0031209 SCAR complex(GO:0031209)
0.1 1.2 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.1 0.7 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 0.8 GO:0034991 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.1 0.3 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.6 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.7 GO:0000922 spindle pole(GO:0000922)
0.1 16.7 GO:0009505 plant-type cell wall(GO:0009505)
0.1 2.2 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.5 GO:0090397 stigma papilla(GO:0090397)
0.1 0.3 GO:0097361 CIA complex(GO:0097361)
0.1 0.9 GO:0055028 cortical microtubule(GO:0055028)
0.1 0.6 GO:0035838 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.1 3.3 GO:0005874 microtubule(GO:0005874)
0.1 0.7 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.1 38.0 GO:0009570 chloroplast stroma(GO:0009570)
0.1 0.3 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.1 0.7 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 0.6 GO:0035618 root hair(GO:0035618)
0.1 0.3 GO:0032044 DSIF complex(GO:0032044)
0.1 0.2 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 0.4 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.1 11.4 GO:0048046 apoplast(GO:0048046)
0.1 0.2 GO:0000795 synaptonemal complex(GO:0000795)
0.1 0.2 GO:0035101 FACT complex(GO:0035101)
0.1 1.2 GO:0000792 heterochromatin(GO:0000792)
0.1 0.1 GO:0009501 amyloplast(GO:0009501)
0.1 0.2 GO:0030896 checkpoint clamp complex(GO:0030896)
0.1 0.4 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 0.2 GO:0009532 plastid stroma(GO:0009532)
0.1 0.3 GO:0010168 ER body(GO:0010168)
0.1 0.2 GO:0010369 chromocenter(GO:0010369)
0.0 2.6 GO:0005811 lipid particle(GO:0005811)
0.0 1.1 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.3 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.1 GO:0033290 eukaryotic 48S preinitiation complex(GO:0033290)
0.0 0.3 GO:0031354 intrinsic component of plastid membrane(GO:0031350) integral component of plastid membrane(GO:0031351) intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.0 0.2 GO:0044545 NSL complex(GO:0044545)
0.0 0.3 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.6 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 84.8 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.0 0.5 GO:0000786 nucleosome(GO:0000786)
0.0 0.2 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.1 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 2.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.2 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 0.4 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.4 GO:0005761 organellar large ribosomal subunit(GO:0000315) mitochondrial ribosome(GO:0005761)
0.0 0.1 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.2 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.0 GO:0032432 actin filament bundle(GO:0032432)
0.0 0.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.1 GO:0000815 ESCRT III complex(GO:0000815)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.4 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.7 2.2 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.7 5.8 GO:0019137 thioglucosidase activity(GO:0019137)
0.7 2.1 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.7 2.0 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.6 1.7 GO:0015026 coreceptor activity(GO:0015026)
0.6 1.7 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.6 2.8 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.5 2.2 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.5 1.6 GO:0005344 oxygen transporter activity(GO:0005344)
0.5 16.2 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.5 1.5 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.5 4.0 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.5 1.4 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.5 3.8 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.5 2.3 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.5 3.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.4 1.3 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.4 1.3 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.4 1.6 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.4 1.2 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.4 8.3 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.4 1.2 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.4 4.6 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.4 3.0 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.4 1.8 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.4 2.1 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.3 3.5 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.3 1.0 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.3 1.7 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.3 1.0 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.3 4.4 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.3 1.3 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.3 1.3 GO:0070402 NADPH binding(GO:0070402)
0.3 1.3 GO:0009885 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.3 1.3 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 2.9 GO:0004373 glycogen (starch) synthase activity(GO:0004373)
0.3 1.3 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.3 1.6 GO:0004333 fumarate hydratase activity(GO:0004333)
0.3 3.8 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.3 0.6 GO:0043015 gamma-tubulin binding(GO:0043015)
0.3 7.0 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.3 7.6 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.3 0.9 GO:0045430 chalcone isomerase activity(GO:0045430)
0.3 1.5 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.3 4.2 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329) auxin transmembrane transporter activity(GO:0080161)
0.3 2.2 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.3 1.6 GO:0047958 glycine:2-oxoglutarate aminotransferase activity(GO:0047958)
0.3 1.4 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.3 0.8 GO:0044540 L-cystine L-cysteine-lyase (deaminating)(GO:0044540)
0.3 0.3 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.3 1.6 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.3 5.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.3 1.0 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.3 0.8 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.3 1.0 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.2 2.0 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 6.4 GO:0016168 chlorophyll binding(GO:0016168)
0.2 1.0 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.2 0.2 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.2 1.2 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 1.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.2 1.0 GO:0042299 lupeol synthase activity(GO:0042299)
0.2 11.3 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.2 5.9 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.2 5.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 1.4 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.2 0.9 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.2 1.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.2 16.6 GO:0003777 microtubule motor activity(GO:0003777)
0.2 0.7 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.2 1.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.2 0.9 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.2 2.2 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.2 0.7 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.2 0.8 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.2 0.6 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.2 0.4 GO:0004359 glutaminase activity(GO:0004359)
0.2 2.0 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.2 1.0 GO:0004001 adenosine kinase activity(GO:0004001)
0.2 0.6 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.2 1.2 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.2 1.0 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.2 0.9 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.2 0.6 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.2 2.6 GO:0031559 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.2 1.5 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 3.6 GO:0008146 sulfotransferase activity(GO:0008146)
0.2 0.5 GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.2 0.5 GO:0009374 biotin binding(GO:0009374)
0.2 0.5 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.2 0.7 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.2 1.6 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.2 1.7 GO:0004312 fatty acid synthase activity(GO:0004312)
0.2 1.0 GO:0051723 protein methylesterase activity(GO:0051723)
0.2 1.0 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.2 1.3 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.2 0.7 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.2 1.6 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.2 1.5 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.2 0.8 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.2 0.6 GO:0070182 DNA polymerase binding(GO:0070182)
0.2 3.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 0.5 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.2 3.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.2 0.6 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.2 1.1 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.2 0.8 GO:0048365 Rac GTPase binding(GO:0048365)
0.2 0.6 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.2 1.8 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 11.6 GO:0008017 microtubule binding(GO:0008017)
0.1 0.4 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.1 0.4 GO:0022835 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.1 0.9 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 1.9 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 3.3 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.1 0.9 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.6 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.1 0.4 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.1 0.4 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 1.1 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.1 0.5 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 1.8 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 1.0 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.1 0.8 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.1 1.9 GO:0008097 5S rRNA binding(GO:0008097)
0.1 0.5 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.5 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 2.6 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.8 GO:0031177 phosphopantetheine binding(GO:0031177)
0.1 0.6 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.1 1.0 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 1.5 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.7 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 3.7 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.2 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 0.6 GO:0016752 sinapoyltransferase activity(GO:0016752) O-sinapoyltransferase activity(GO:0016753)
0.1 0.5 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.1 0.4 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 1.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.4 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.4 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.4 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.4 GO:0036310 annealing helicase activity(GO:0036310)
0.1 1.4 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 1.1 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.1 0.5 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.1 1.0 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.2 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 0.6 GO:0008430 selenium binding(GO:0008430)
0.1 0.6 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 1.1 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.1 0.4 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.3 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.1 0.7 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.8 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.1 0.8 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.6 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.8 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.1 1.0 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.3 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 0.4 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 1.7 GO:0008417 fucosyltransferase activity(GO:0008417)
0.1 0.3 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.7 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 1.4 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.4 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.1 4.0 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 10.9 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 1.9 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.1 0.5 GO:0016675 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 0.5 GO:0035173 histone kinase activity(GO:0035173)
0.1 1.1 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 0.3 GO:0005034 osmosensor activity(GO:0005034)
0.1 0.4 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.1 0.6 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.3 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 1.3 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.4 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.1 0.4 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.5 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 1.3 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 0.8 GO:0000400 four-way junction DNA binding(GO:0000400)
0.1 0.4 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.1 2.4 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.3 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 0.7 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 0.2 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.1 0.7 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.1 0.9 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.3 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.1 0.2 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.1 0.4 GO:0010313 phytochrome binding(GO:0010313)
0.1 3.6 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.1 1.8 GO:0008810 cellulase activity(GO:0008810)
0.1 0.3 GO:0001671 ATPase activator activity(GO:0001671)
0.1 4.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.3 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.1 0.5 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 0.5 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 0.3 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 1.2 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.5 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 2.1 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.5 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.3 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.1 0.1 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.1 0.3 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 0.6 GO:0008169 C-methyltransferase activity(GO:0008169)
0.1 4.7 GO:0030599 pectinesterase activity(GO:0030599)
0.1 0.7 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.4 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.1 0.2 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.1 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 0.2 GO:0018271 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.1 0.2 GO:0019534 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.5 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.2 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 0.5 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.1 0.6 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.6 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.1 0.6 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.8 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.1 0.3 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.2 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 0.6 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.1 0.6 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 1.5 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.1 0.2 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.1 0.5 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.1 0.3 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.1 0.3 GO:0019871 ion channel inhibitor activity(GO:0008200) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.1 0.7 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 1.5 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 0.8 GO:0005548 phospholipid transporter activity(GO:0005548)
0.0 0.6 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 2.9 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.2 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.0 0.3 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.6 GO:0008061 chitin binding(GO:0008061)
0.0 0.2 GO:0004310 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.0 0.4 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.0 1.0 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.2 GO:0019825 oxygen binding(GO:0019825)
0.0 0.5 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 2.4 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.4 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.0 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.0 0.3 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.3 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.4 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.0 0.1 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.0 0.1 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.0 0.3 GO:0008083 growth factor activity(GO:0008083)
0.0 0.2 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.6 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.1 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.0 0.1 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 0.2 GO:0016859 cis-trans isomerase activity(GO:0016859)
0.0 4.3 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.1 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.0 0.4 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 0.4 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 5.9 GO:0008134 transcription factor binding(GO:0008134)
0.0 0.3 GO:0004096 catalase activity(GO:0004096)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.1 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.4 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 0.3 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.3 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 1.5 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 1.3 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.0 1.2 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.7 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 1.0 GO:0005179 hormone activity(GO:0005179)
0.0 0.3 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.2 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.1 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.2 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.1 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.0 0.4 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.1 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.3 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.6 GO:0010427 abscisic acid binding(GO:0010427)
0.0 0.3 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.2 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 5.6 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 1.1 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.1 GO:0008172 S-methyltransferase activity(GO:0008172)
0.0 0.7 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.1 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.8 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.4 GO:0016846 carbon-sulfur lyase activity(GO:0016846)
0.0 0.5 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 0.2 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.1 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.1 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.8 GO:0043621 protein self-association(GO:0043621)
0.0 0.2 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.2 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0 0.0 GO:0016842 amidine-lyase activity(GO:0016842)
0.0 0.1 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.2 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.0 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.2 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.2 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 9.9 PID CMYB PATHWAY C-MYB transcription factor network
0.4 2.3 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.3 1.0 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.2 0.7 PID IL12 2PATHWAY IL12-mediated signaling events
0.2 0.9 PID P53 REGULATION PATHWAY p53 pathway
0.2 0.7 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.1 0.7 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.1 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.1 0.7 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.1 1.3 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 0.4 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.1 0.3 PID TELOMERASE PATHWAY Regulation of Telomerase
0.1 0.4 PID AURORA A PATHWAY Aurora A signaling
0.1 0.5 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.1 0.5 PID FANCONI PATHWAY Fanconi anemia pathway
0.1 0.9 PID ATR PATHWAY ATR signaling pathway
0.1 0.2 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.1 0.3 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly
0.1 0.2 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.3 PID E2F PATHWAY E2F transcription factor network
0.0 0.0 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.0 0.1 PID AVB3 OPN PATHWAY Osteopontin-mediated events
0.0 0.1 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 14.6 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.6 1.9 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.4 1.8 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.3 2.0 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.3 1.1 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.2 1.1 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.2 0.9 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.2 0.4 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.2 0.5 REACTOME SPRY REGULATION OF FGF SIGNALING Genes involved in Spry regulation of FGF signaling
0.2 0.7 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.2 0.5 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.2 0.3 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.4 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.1 0.4 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 2.3 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.1 0.3 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.1 0.5 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.1 0.1 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.1 0.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.3 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.1 0.8 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.1 0.2 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.4 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.1 0.3 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.0 0.1 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.0 0.1 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.0 0.6 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0 0.1 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 0.1 REACTOME ASSOCIATION OF LICENSING FACTORS WITH THE PRE REPLICATIVE COMPLEX Genes involved in Association of licensing factors with the pre-replicative complex
0.0 0.1 REACTOME MITOTIC G2 G2 M PHASES Genes involved in Mitotic G2-G2/M phases