ISMARA results: AT2G21230

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G21230

Z-value: 0.32

Transcription factors associated with AT2G21230

Gene Symbol	Gene ID	Gene Info
AT2G21230 TAIR	AT2G21230	Basic-leucine zipper (bZIP) transcription factor family protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
AT2G21230	arTal_v1_Chr2_-_9096347_9096414	-0.76	2.9e-06	Click!

Activity profile of AT2G21230 motif

Sorted Z-values of AT2G21230 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr5_+_24167996_24168072 Show fit	1.16	AT5G60020.1 AT5G60020.2	LAC17 TAIR Show fit	laccase 17
arTal_v1_Chr5_+_24168245_24168245 Show fit	0.88	AT5G60020.3	LAC17 TAIR Show fit	laccase 17
arTal_v1_Chr5_-_5741500_5741500 Show fit	0.77	AT5G17420.1	IRX3 TAIR Show fit	Cellulose synthase family protein
arTal_v1_Chr5_+_17714390_17714390 Show fit	0.71	AT5G44030.2 AT5G44030.1	CESA4 TAIR Show fit	cellulose synthase A4
arTal_v1_Chr2_-_15589369_15589369 Show fit	0.51	AT2G37090.1	IRX9 TAIR Show fit	Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_+_17715687_17715687 Show fit	0.44	AT5G44030.3	CESA4 TAIR Show fit	cellulose synthase A4
arTal_v1_Chr4_-_16063070_16063251 Show fit	0.43	AT4G33330.2 AT4G33330.1 AT4G33330.5 AT4G33330.3 AT4G33330.4	PGSIP3 TAIR Show fit	plant glycogenin-like starch initiation protein 3
arTal_v1_Chr3_-_8217080_8217206 Show fit	0.41	AT3G23090.1 AT3G23090.2 AT3G23090.4 AT3G23090.3	AT3G23090 TAIR Show fit	TPX2 (targeting protein for Xklp2) protein family
arTal_v1_Chr3_-_8216305_8216305 Show fit	0.25	AT3G23090.5	AT3G23090 TAIR Show fit	TPX2 (targeting protein for Xklp2) protein family
arTal_v1_Chr1_-_9510263_9510269 Show fit	0.14	AT1G27380.1 AT1G27380.3 AT1G27380.4	RIC2 TAIR Show fit	ROP-interactive CRIB motif-containing protein 2

Showing 1 to 10 of 11 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G21230

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.3	GO:0009809	lignin biosynthetic process(GO:0009809)
0.0	1.1	GO:0009833	plant-type primary cell wall biogenesis(GO:0009833)
0.1	0.9	GO:0010413	glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.2	0.8	GO:0010395	rhamnogalacturonan I metabolic process(GO:0010395)

Showing 1 to 4 of 4 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.8	GO:0010330	cellulose synthase complex(GO:0010330)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	2.0	GO:0052716	hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1	1.9	GO:0016760	cellulose synthase (UDP-forming) activity(GO:0016760)
0.1	0.5	GO:0047517	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.2	0.4	GO:0080116	glucuronoxylan glucuronosyltransferase activity(GO:0080116)

Showing 1 to 4 of 4 entries

Results for AT2G21230

Z-value: 0.32

Transcription factors associated with AT2G21230

Activity-expression correlation:

Activity profile of AT2G21230 motif

Sorted Z-values of AT2G21230 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G21230

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: