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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G15740

Z-value: 4.85

Transcription factors associated with AT2G15740

Gene Symbol Gene ID Gene Info
AT2G15740
AT2G15740 C2H2-like zinc finger protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT2G15740arTal_v1_Chr2_-_6857735_68577350.384.8e-02Click!

Activity profile of AT2G15740 motif

Sorted Z-values of AT2G15740 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_17855637 26.07 AT4G37990.1
ELI3-2
cinnamyl alcohol dehydrogenase 8
Chr3_+_5234457 24.11 AT3G15500.1
NAC3
NAC domain containing protein 3
Chr4_+_15828228 23.60 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr2_+_19375985 22.02 AT2G47190.1
MYB2
myb domain protein 2
Chr3_+_17724400 21.97 AT3G48020.1
AT3G48020
hypothetical protein
Chr5_+_3239617 21.34 AT5G10300.2
MES5
methyl esterase 5
Chr2_-_18646606 21.14 AT2G45220.1
AT2G45220
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_3239455 21.00 AT5G10300.1
MES5
methyl esterase 5
Chr1_-_10356482 20.90 AT1G29640.1
AT1G29640
senescence regulator (Protein of unknown function, DUF584)
Chr1_-_19698482 20.39 AT1G52890.1
NAC019
NAC domain containing protein 19
Chr5_-_4183354 20.33 AT5G13170.1
SAG29
senescence-associated gene 29
Chr5_-_2176446 20.26 AT5G07010.1
ST2A
sulfotransferase 2A
Chr4_-_12018492 19.96 AT4G22920.1
NYE1
non-yellowing 1
Chr4_-_12018643 19.89 AT4G22920.2
NYE1
non-yellowing 1
Chr2_-_14541617 19.86 AT2G34500.1
CYP710A1
cytochrome P450, family 710, subfamily A, polypeptide 1
Chr5_-_23896702 19.79 AT5G59220.2
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
Chr3_-_4657723 19.51 AT3G14060.1
AT3G14060
hypothetical protein
Chr5_-_23896939 19.43 AT5G59220.1
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
Chr5_-_4151201 19.26 AT5G13080.1
WRKY75
WRKY DNA-binding protein 75
Chr3_-_7999552 19.02 AT3G22560.1
AT3G22560
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr4_-_9368852 18.40 AT4G16640.1
AT4G16640
Matrixin family protein
Chr4_-_16344818 17.81 AT4G34131.1
UGT73B3
UDP-glucosyl transferase 73B3
Chr2_+_18558885 17.75 AT2G44990.2
AT2G44990.3
AT2G44990.1
CCD7
carotenoid cleavage dioxygenase 7
Chr4_+_18409846 17.23 AT4G39670.1
AT4G39670
Glycolipid transfer protein (GLTP) family protein
Chr3_-_19643276 17.18 AT3G52970.1
AT3G52970.2
CYP76G1
cytochrome P450, family 76, subfamily G, polypeptide 1
Chr4_-_17494279 17.12 AT4G37150.1
MES9
methyl esterase 9
Chr1_+_23072222 16.98 AT1G62370.1
AT1G62370
RING/U-box superfamily protein
Chr4_-_2234689 16.73 AT4G04490.1
CRK36
cysteine-rich RLK (RECEPTOR-like protein kinase) 36
Chr1_+_1469541 16.72 AT1G05100.1
MAPKKK18
mitogen-activated protein kinase kinase kinase 18
Chr1_-_23690807 16.50 AT1G63840.1
AT1G63840
RING/U-box superfamily protein
Chr1_-_26338818 16.33 AT1G69930.1
GSTU11
glutathione S-transferase TAU 11
Chr1_+_22824414 16.30 AT1G61800.2
AT1G61800.1
GPT2
glucose-6-phosphate/phosphate translocator 2
Chr5_+_5710910 16.10 AT5G17330.1
GAD
glutamate decarboxylase
Chr3_-_11194897 15.96 AT3G29250.2
AT3G29250.1
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_25473544 15.92 AT1G67920.1
AT1G67920
hypothetical protein
Chr5_+_523257 15.86 AT5G02420.1
AT5G02420
cyclin-dependent kinase inhibitor SMR3-like protein
Chr5_+_4271730 15.79 AT5G13330.1
Rap2.6L
related to AP2 6l
Chr3_-_18241341 15.78 AT3G49210.2
AT3G49210
O-acyltransferase (WSD1-like) family protein
Chr3_-_18241524 15.54 AT3G49210.1
AT3G49210
O-acyltransferase (WSD1-like) family protein
Chr5_-_9247540 15.35 AT5G26340.1
MSS1
Major facilitator superfamily protein
Chr1_+_6100964 15.34 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr1_+_8720309 15.24 AT1G24600.1
AT1G24600
hypothetical protein
Chr2_-_8471644 15.15 AT2G19570.1
CDA1
cytidine deaminase 1
Chr3_+_1635194 15.08 AT3G05630.1
PLDP2
phospholipase D P2
Chr1_-_662456 15.07 AT1G02930.2
AT1G02930.1
GSTF6
glutathione S-transferase 6
Chr5_-_552827 15.01 AT5G02490.1
Hsp70-2
Heat shock protein 70 (Hsp 70) family protein
Chr5_-_2652535 14.87 AT5G08240.1
AT5G08240
transmembrane protein
Chr5_+_26772644 14.86 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
Chr4_-_17571743 14.80 AT4G37370.1
CYP81D8
cytochrome P450, family 81, subfamily D, polypeptide 8
Chr4_-_8095749 14.75 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
Chr1_+_28291698 14.60 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
Chr5_+_15501126 14.55 AT5G38710.1
AT5G38710.2
AT5G38710
Methylenetetrahydrofolate reductase family protein
Chr5_-_3405571 14.53 AT5G10770.1
AT5G10770
Eukaryotic aspartyl protease family protein
Chr5_-_24836933 14.41 AT5G61820.1
AT5G61820.2
AT5G61820
stress up-regulated Nod 19 protein
Chr5_+_20764096 14.25 AT5G51070.1
ERD1
Clp ATPase
Chr1_-_612324 14.19 AT1G02790.1
PGA4
polygalacturonase 4
Chr1_-_3756998 14.16 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr2_-_17806073 14.03 AT2G42790.1
CSY3
citrate synthase 3
Chr5_-_1508927 13.97 AT5G05110.1
AT5G05110
Cystatin/monellin family protein
Chr1_-_17706460 13.94 AT1G48000.1
MYB112
myb domain protein 112
Chr4_+_7239200 13.93 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
Chr1_-_430720 13.54 AT1G02220.1
NAC003
NAC domain containing protein 3
Chr4_+_131422 13.22 AT4G00305.1
AT4G00305
RING/U-box superfamily protein
Chr2_+_12767585 13.19 AT2G29950.1
ELF4-L1
ELF4-like 1
Chr3_+_815550 13.17 AT3G03440.1
AT3G03440
ARM repeat superfamily protein
Chr5_-_26096114 13.11 AT5G65300.1
AT5G65300
hypothetical protein
Chr1_+_28296886 13.11 AT1G75400.1
AT1G75400
RING/U-box superfamily protein
Chr5_+_4268532 13.10 AT5G13320.3
PBS3
Auxin-responsive GH3 family protein
Chr5_+_8082650 13.07 AT5G23950.2
AT5G23950.1
AT5G23950
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr4_+_12977192 13.01 AT4G25390.1
AT4G25390.2
AT4G25390
Protein kinase superfamily protein
Chr1_-_27569823 12.93 AT1G73330.1
DR4
drought-repressed 4
Chr2_-_13929763 12.91 AT2G32830.1
PHT1%3B5
phosphate transporter 1;5
Chr5_+_4268316 12.91 AT5G13320.2
PBS3
Auxin-responsive GH3 family protein
Chr1_-_977761 12.90 AT1G03850.1
AT1G03850.2
AT1G03850.3
GRXS13
Glutaredoxin family protein
Chr4_+_18530318 12.88 AT4G39955.1
AT4G39955
alpha/beta-Hydrolases superfamily protein
Chr5_-_16085213 12.84 AT5G40240.3
AT5G40240.1
UMAMIT40
nodulin MtN21 /EamA-like transporter family protein
Chr4_-_11971203 12.84 AT4G22780.1
ACR7
ACT domain repeat 7
Chr3_-_9471039 12.79 AT3G25882.1
NIMIN-2
NIM1-interacting 2
Chr4_-_11971357 12.77 AT4G22780.2
ACR7
ACT domain repeat 7
Chr1_+_11937499 12.73 AT1G32940.1
AT1G32940.3
AT1G32940.4
SBT3.5
Subtilase family protein
Chr2_-_19330197 12.70 AT2G47040.1
VGD1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_-_2498095 12.61 AT3G07820.1
AT3G07820
Pectin lyase-like superfamily protein
Chr5_-_24702761 12.50 AT5G61430.2
AT5G61430.1
NAC100
NAC domain containing protein 100
Chr5_-_3402389 12.48 AT5G10760.1
AT5G10760
Eukaryotic aspartyl protease family protein
Chr1_-_5133860 12.37 AT1G14880.1
PCR1
PLANT CADMIUM RESISTANCE 1
Chr2_+_11620076 12.35 AT2G27180.1
AT2G27180
hypothetical protein
Chr5_-_25813620 12.21 AT5G64570.3
AT5G64570.2
AT5G64570.1
XYL4
beta-D-xylosidase 4
Chr2_-_243649 12.20 AT2G01540.1
AT2G01540
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_+_4267456 12.08 AT5G13320.1
PBS3
Auxin-responsive GH3 family protein
Chr5_+_1153740 12.07 AT5G04200.1
MC9
metacaspase 9
Chr4_-_11636720 11.96 AT4G21920.1
AT4G21920
hypothetical protein
Chr5_+_26592648 11.95 AT5G66630.1
DAR5
DA1-related protein 5
Chr3_+_9496102 11.90 AT3G25950.1
AT3G25950
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Chr5_+_25210301 11.87 AT5G62770.1
AT5G62770
membrane-associated kinase regulator, putative (DUF1645)
Chr3_-_21303230 11.85 AT3G57540.1
AT3G57540
Remorin family protein
Chr1_+_27462983 11.70 AT1G73000.1
PYL3
PYR1-like 3
Chr2_+_17639001 11.68 AT2G42350.1
AT2G42350
RING/U-box superfamily protein
Chr1_-_27466348 11.53 AT1G73010.1
PS2
inorganic pyrophosphatase 1
Chr2_-_10127589 11.53 AT2G23790.1
AT2G23790
calcium uniporter (DUF607)
Chr2_+_18216574 11.52 AT2G44010.1
AT2G44010
hypothetical protein
Chr3_-_18294621 11.47 AT3G49340.1
AT3G49340
Cysteine proteinases superfamily protein
Chr5_-_16084957 11.47 AT5G40240.2
UMAMIT40
nodulin MtN21 /EamA-like transporter family protein
Chr4_+_9385119 11.41 AT4G16670.2
AT4G16670.3
AT4G16670.1
AT4G16670
auxin canalization protein (DUF828)
Chr3_-_6804114 11.41 AT3G19580.2
ZF2
zinc-finger protein 2
Chr1_+_22198266 11.38 AT1G60190.1
PUB19
ARM repeat superfamily protein
Chr5_-_18506382 11.37 AT5G45630.1
AT5G45630
senescence regulator (Protein of unknown function, DUF584)
Chr1_-_4305907 11.25 AT1G12640.1
LPLAT1
MBOAT (membrane bound O-acyl transferase) family protein
Chr5_+_25322975 11.20 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr3_-_6804296 11.20 AT3G19580.1
ZF2
zinc-finger protein 2
Chr1_+_10897925 11.16 AT1G30720.1
AT1G30720
FAD-binding Berberine family protein
Chr4_-_14393381 11.09 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr3_-_11195171 11.08 AT3G29250.3
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_24485046 11.08 AT1G65820.1
AT1G65820.3
AT1G65820.2
AT1G65820
microsomal glutathione s-transferase
Chr4_-_10714745 11.07 AT4G19700.1
RING
SBP (S-ribonuclease binding protein) family protein
Chr5_+_15634444 10.94 AT5G39050.1
PMAT1
HXXXD-type acyl-transferase family protein
Chr5_-_19542760 10.93 AT5G48180.1
NSP5
nitrile specifier protein 5
Chr2_-_19140849 10.92 AT2G46620.1
AT2G46620
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_17464242 10.89 AT2G41850.1
PGAZAT
polygalacturonase ADPG2-like protein
Chr5_+_16297465 10.89 AT5G40720.1
AT5G40720.3
AT5G40720
C3H4 type zinc finger protein (DUF23)
Chr2_-_476650 10.63 AT2G02010.1
GAD4
glutamate decarboxylase 4
Chr2_-_9866562 10.58 AT2G23170.1
GH3.3
Auxin-responsive GH3 family protein
Chr5_-_4722371 10.54 AT5G14640.1
SK13
shaggy-like kinase 13
Chr3_+_3442237 10.52 AT3G10985.1
SAG20
senescence associated gene 20
Chr2_-_16368570 10.45 AT2G39210.1
AT2G39210
Major facilitator superfamily protein
Chr5_-_4722048 10.37 AT5G14640.2
SK13
shaggy-like kinase 13
Chr2_+_18961283 10.35 AT2G46150.1
AT2G46150
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_-_16115204 10.34 AT2G38490.1
CIPK22
CBL-interacting Serine/Threonine-kinase
Chr4_-_17041131 10.31 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr3_-_5796893 10.28 AT3G16990.1
AT3G16990
heme oxygenase-like, multi-helical
Chr3_-_1039603 10.24 AT3G04010.1
AT3G04010
O-Glycosyl hydrolases family 17 protein
Chr2_+_12023940 10.22 AT2G28200.1
AT2G28200
C2H2-type zinc finger family protein
Chr2_-_476997 10.21 AT2G02010.2
GAD4
glutamate decarboxylase 4
Chr4_-_17041326 10.21 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr2_+_13014530 10.16 AT2G30550.2
AT2G30550
alpha/beta-Hydrolases superfamily protein
Chr3_+_6536534 10.12 AT3G18950.1
AT3G18950
Transducin/WD40 repeat-like superfamily protein
Chr1_+_11937183 10.11 AT1G32940.2
SBT3.5
Subtilase family protein
Chr5_-_213472 10.09 AT5G01540.1
LECRKA4.1
lectin receptor kinase a4.1
Chr5_-_6338209 10.07 AT5G18980.1
AT5G18980.2
AT5G18980
ARM repeat superfamily protein
Chr5_+_1592013 10.06 AT5G05380.2
AT5G05380.3
AT5G05380.4
AT5G05380.1
PRA1.B3
prenylated RAB acceptor 1.B3
Chr1_-_8537780 10.04 AT1G24140.1
AT1G24140
Matrixin family protein
Chr2_+_13014859 10.01 AT2G30550.1
AT2G30550
alpha/beta-Hydrolases superfamily protein
Chr5_+_25692425 9.95 AT5G64230.1
AT5G64230
1,8-cineole synthase
Chr4_+_8545025 9.94 AT4G14950.1
AT4G14950.3
AT4G14950.2
KMS1
SNARE associated Golgi protein family
Chr2_+_11364996 9.90 AT2G26695.2
AT2G26695.1
AT2G26695
Ran BP2/NZF zinc finger-like superfamily protein
Chr1_-_27749248 9.86 AT1G73805.1
SARD1
Calmodulin binding protein-like protein
Chr2_-_10672892 9.83 AT2G25090.1
CIPK16
CBL-interacting protein kinase 16
Chr3_+_10456029 9.83 AT3G28100.1
AT3G28100.2
AT3G28100.3
UMAMIT45
nodulin MtN21 /EamA-like transporter family protein
Chr3_-_10120645 9.82 AT3G27330.1
AT3G27330
zinc finger (C3HC4-type RING finger) family protein
Chr4_+_13275200 9.82 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr5_+_16297300 9.79 AT5G40720.2
AT5G40720
C3H4 type zinc finger protein (DUF23)
Chr4_-_16388719 9.77 AT4G34230.2
CAD5
cinnamyl alcohol dehydrogenase 5
Chr3_+_8918679 9.77 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
Chr1_-_575085 9.73 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
Chr1_+_29099839 9.71 AT1G77450.1
NAC032
NAC domain containing protein 32
Chr5_+_25563724 9.66 AT5G63880.2
AT5G63880.1
VPS20.1
SNF7 family protein
Chr4_-_16388940 9.64 AT4G34230.1
CAD5
cinnamyl alcohol dehydrogenase 5
Chr4_-_16562931 9.55 AT4G34710.2
AT4G34710.1
ADC2
arginine decarboxylase 2
Chr3_+_8918267 9.54 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
Chr5_+_19135952 9.54 AT5G47120.1
BI1
BAX inhibitor 1
Chr3_-_845096 9.54 AT3G03530.1
NPC4
non-specific phospholipase C4
Chr2_+_11860218 9.54 AT2G27830.1
AT2G27830
hypothetical protein
Chr2_+_19568464 9.53 AT2G47770.1
TSPO
TSPO(outer membrane tryptophan-rich sensory protein)-like protein
Chr2_-_13386392 9.45 AT2G31390.1
AT2G31390
pfkB-like carbohydrate kinase family protein
Chr1_-_2152541 9.35 AT1G07000.1
EXO70B2
exocyst subunit exo70 family protein B2
Chr1_+_26423874 9.35 AT1G70170.1
MMP
matrix metalloproteinase
Chr2_+_8550253 9.30 AT2G19810.1
OZF1
CCCH-type zinc finger family protein
Chr2_-_9991526 9.30 AT2G23450.1
AT2G23450
Protein kinase superfamily protein
Chr5_+_413952 9.28 AT5G02100.3
UNE18
Oxysterol-binding family protein
Chr5_+_413479 9.24 AT5G02100.2
UNE18
Oxysterol-binding family protein
Chr5_+_16815310 9.20 AT5G42050.1
AT5G42050
DCD (Development and Cell Death) domain protein
Chr2_-_9992010 9.20 AT2G23450.2
AT2G23450
Protein kinase superfamily protein
Chr1_-_29187932 9.17 AT1G77660.1
AT1G77660
Histone H3 K4-specific methyltransferase SET7/9 family protein
Chr5_-_23725585 9.06 AT5G58730.1
Mik
pfkB-like carbohydrate kinase family protein
Chr2_-_16702336 9.03 AT2G40000.1
HSPRO2
ortholog of sugar beet HS1 PRO-1 2
Chr5_+_413281 9.01 AT5G02100.1
UNE18
Oxysterol-binding family protein
Chr5_+_6802282 8.99 AT5G20150.1
SPX1
SPX domain-containing protein 1
Chr1_+_28163344 8.98 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
Chr1_-_8136034 8.95 AT1G22985.1
CRF7
Integrase-type DNA-binding superfamily protein
Chr5_+_23693259 8.93 AT5G58620.1
AT5G58620
zinc finger (CCCH-type) family protein
Chr3_+_4940318 8.91 AT3G14700.2
AT3G14700.1
AT3G14700
SART-1 family
Chr5_-_7054281 8.89 AT5G20830.3
SUS1
sucrose synthase 1
Chr1_+_20135100 8.87 AT1G53910.2
AT1G53910.3
RAP2.12
related to AP2 12
Chr2_+_17360374 8.82 AT2G41640.1
AT2G41640.3
AT2G41640.2
AT2G41640
Glycosyltransferase family 61 protein
Chr5_-_7054713 8.81 AT5G20830.1
SUS1
sucrose synthase 1
Chr5_-_2458502 8.80 AT5G07730.1
AT5G07730
transmembrane protein
Chr1_+_23527570 8.78 AT1G63440.1
HMA5
heavy metal atpase 5
Chr5_-_4954970 8.78 AT5G15260.2
AT5G15260.1
AT5G15260
ribosomal protein L34e superfamily protein
Chr5_-_9944942 8.78 AT5G27920.1
AT5G27920
F-box family protein
Chr3_+_16745873 8.77 AT3G45620.1
AT3G45620.2
AT3G45620
Transducin/WD40 repeat-like superfamily protein
Chr5_+_25703649 8.77 AT5G64260.1
EXL2
EXORDIUM like 2
Chr1_+_20134844 8.72 AT1G53910.1
RAP2.12
related to AP2 12
Chr5_-_7055398 8.68 AT5G20830.2
SUS1
sucrose synthase 1
Chr5_-_924728 8.67 AT5G03630.1
ATMDAR2
Pyridine nucleotide-disulfide oxidoreductase family protein
Chr3_+_19534585 8.66 AT3G52710.1
AT3G52710
hypothetical protein
Chr1_-_29465249 8.66 AT1G78310.1
AT1G78310
VQ motif-containing protein
Chr2_+_15750915 8.66 AT2G37530.1
AT2G37530
forkhead box protein G1
Chr2_-_1024497 8.65 AT2G03360.2
AT2G03360.1
AT2G03360
Glycosyltransferase family 61 protein
Chr5_+_3524677 8.62 AT5G11090.1
AT5G11090
serine-rich protein-like protein
Chr5_+_22652715 8.58 AT5G55930.1
OPT1
oligopeptide transporter 1
Chr1_+_21676388 8.58 AT1G58360.1
AAP1
amino acid permease 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G15740

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
13.8 41.4 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
12.7 38.1 GO:0016046 detection of fungus(GO:0016046)
10.6 42.3 GO:0016139 glycoside catabolic process(GO:0016139)
6.4 19.3 GO:0010055 atrichoblast differentiation(GO:0010055)
5.3 26.4 GO:0072708 response to sorbitol(GO:0072708)
4.8 24.1 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
4.8 14.3 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
4.2 16.7 GO:1902457 negative regulation of stomatal opening(GO:1902457)
4.1 16.3 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
3.9 30.9 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
3.6 10.9 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
3.2 15.9 GO:0006564 L-serine biosynthetic process(GO:0006564)
3.2 9.5 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
3.1 12.5 GO:0070509 calcium ion import(GO:0070509)
3.1 9.3 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
3.1 21.5 GO:0043090 amino acid import(GO:0043090)
2.9 8.8 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
2.5 15.2 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
2.5 22.4 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
2.5 7.4 GO:0032196 transposition(GO:0032196)
2.4 7.2 GO:0032491 detection of molecule of fungal origin(GO:0032491)
2.4 9.6 GO:0006527 arginine catabolic process(GO:0006527)
2.3 36.9 GO:0006538 glutamate catabolic process(GO:0006538)
2.2 39.9 GO:0015996 chlorophyll catabolic process(GO:0015996) pigment catabolic process(GO:0046149)
2.2 24.0 GO:0052547 negative regulation of peptidase activity(GO:0010466) regulation of peptidase activity(GO:0052547)
2.0 10.1 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
2.0 6.0 GO:2000693 positive regulation of seed maturation(GO:2000693)
2.0 2.0 GO:0015744 succinate transport(GO:0015744)
1.9 5.7 GO:0010213 non-photoreactive DNA repair(GO:0010213)
1.9 5.7 GO:0046203 spermidine catabolic process(GO:0046203)
1.9 5.6 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
1.9 5.6 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
1.8 9.0 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
1.8 7.1 GO:0035494 SNARE complex disassembly(GO:0035494)
1.8 14.1 GO:0060866 leaf abscission(GO:0060866)
1.8 5.3 GO:0010481 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
1.7 24.3 GO:0051865 protein autoubiquitination(GO:0051865)
1.7 8.6 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
1.7 8.3 GO:1902767 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
1.7 1.7 GO:2000011 regulation of adaxial/abaxial pattern formation(GO:2000011)
1.6 4.8 GO:0071421 manganese ion transmembrane transport(GO:0071421)
1.6 4.8 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
1.6 6.3 GO:0010185 regulation of cellular defense response(GO:0010185)
1.5 15.4 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
1.5 4.5 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
1.5 4.4 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
1.4 5.7 GO:0010507 negative regulation of autophagy(GO:0010507)
1.4 9.7 GO:1900057 positive regulation of leaf senescence(GO:1900057)
1.3 3.9 GO:0009264 nucleoside triphosphate catabolic process(GO:0009143) deoxyribonucleotide catabolic process(GO:0009264)
1.3 7.8 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
1.3 5.2 GO:0070676 intralumenal vesicle formation(GO:0070676)
1.2 15.0 GO:0015749 monosaccharide transport(GO:0015749)
1.2 3.7 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
1.2 7.4 GO:0071169 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
1.2 3.7 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
1.2 4.8 GO:0015697 quaternary ammonium group transport(GO:0015697)
1.2 3.6 GO:0043982 histone H4-K8 acetylation(GO:0043982)
1.2 4.7 GO:0000012 single strand break repair(GO:0000012)
1.2 5.9 GO:0051601 exocyst localization(GO:0051601)
1.2 23.3 GO:0002238 response to molecule of fungal origin(GO:0002238)
1.2 4.6 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
1.2 4.6 GO:0071494 cellular response to UV-C(GO:0071494)
1.2 17.3 GO:0019375 galactolipid biosynthetic process(GO:0019375)
1.2 4.6 GO:0015669 gas transport(GO:0015669)
1.1 10.3 GO:0009229 thiamine diphosphate biosynthetic process(GO:0009229) thiamine diphosphate metabolic process(GO:0042357)
1.1 5.7 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
1.1 3.4 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
1.1 3.4 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
1.1 15.9 GO:0015865 purine nucleotide transport(GO:0015865)
1.0 5.2 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
1.0 4.1 GO:0043461 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
1.0 18.6 GO:0009649 entrainment of circadian clock(GO:0009649)
1.0 50.3 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
1.0 9.2 GO:0080183 response to photooxidative stress(GO:0080183)
1.0 16.2 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
1.0 5.0 GO:0070863 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
1.0 1.0 GO:0042219 cellular modified amino acid catabolic process(GO:0042219)
1.0 10.9 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
1.0 3.0 GO:0016540 protein autoprocessing(GO:0016540)
1.0 5.9 GO:0016559 peroxisome fission(GO:0016559)
1.0 4.8 GO:1902065 response to L-glutamate(GO:1902065)
1.0 16.4 GO:0000266 mitochondrial fission(GO:0000266)
0.9 11.1 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.9 4.6 GO:0034497 protein localization to pre-autophagosomal structure(GO:0034497)
0.9 9.1 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.9 16.1 GO:0015770 sucrose transport(GO:0015770)
0.9 17.2 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.9 3.4 GO:0010047 fruit dehiscence(GO:0010047)
0.8 3.4 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.8 3.4 GO:0042256 mature ribosome assembly(GO:0042256)
0.8 11.5 GO:0051262 protein tetramerization(GO:0051262)
0.8 3.3 GO:0015807 L-amino acid transport(GO:0015807)
0.8 10.7 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.8 7.3 GO:0043171 peptide catabolic process(GO:0043171)
0.8 5.7 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.8 7.2 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.8 5.6 GO:0010225 response to UV-C(GO:0010225)
0.8 2.4 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.8 19.1 GO:0009593 detection of chemical stimulus(GO:0009593)
0.8 7.9 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.8 3.9 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.8 3.1 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.7 6.0 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.7 7.5 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.7 3.0 GO:0050792 regulation of viral process(GO:0050792)
0.7 41.5 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.7 22.8 GO:0042026 protein refolding(GO:0042026)
0.7 2.2 GO:1904031 positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737) positive regulation of cyclin-dependent protein kinase activity(GO:1904031)
0.7 2.2 GO:0061641 CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641)
0.7 8.5 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.7 152.7 GO:0071456 cellular response to hypoxia(GO:0071456)
0.7 17.6 GO:0030042 actin filament depolymerization(GO:0030042)
0.7 2.8 GO:0006552 leucine catabolic process(GO:0006552)
0.7 2.1 GO:0042178 xenobiotic metabolic process(GO:0006805) xenobiotic catabolic process(GO:0042178) cellular response to xenobiotic stimulus(GO:0071466)
0.7 2.8 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.7 2.8 GO:0097576 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144) vacuole fusion(GO:0097576)
0.7 3.4 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.7 31.4 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.7 4.7 GO:0050688 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.7 2.7 GO:0051196 regulation of coenzyme metabolic process(GO:0051196)
0.7 0.7 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.7 9.9 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.7 3.3 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.7 2.6 GO:0032958 inositol phosphate biosynthetic process(GO:0032958)
0.7 5.9 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.6 33.8 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.6 4.5 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.6 10.8 GO:0046352 disaccharide catabolic process(GO:0046352)
0.6 1.3 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.6 2.5 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.6 1.9 GO:0051443 positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.6 5.0 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.6 22.9 GO:1901421 positive regulation of response to alcohol(GO:1901421)
0.6 2.5 GO:1990573 potassium ion import across plasma membrane(GO:1990573)
0.6 3.7 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.6 3.0 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.6 2.4 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.6 5.9 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.6 10.6 GO:0051260 protein homooligomerization(GO:0051260)
0.6 17.7 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.6 3.5 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.6 6.9 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.6 5.1 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.6 15.8 GO:0050826 response to freezing(GO:0050826)
0.6 1.1 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.6 3.3 GO:2000105 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.5 11.5 GO:0010227 floral organ abscission(GO:0010227)
0.5 7.6 GO:0006574 valine catabolic process(GO:0006574)
0.5 15.7 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.5 2.2 GO:0016598 protein arginylation(GO:0016598)
0.5 18.4 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.5 2.1 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.5 32.0 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.5 15.4 GO:0010345 suberin biosynthetic process(GO:0010345)
0.5 2.0 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.5 2.0 GO:1901976 regulation of cell cycle checkpoint(GO:1901976)
0.5 9.4 GO:0006814 sodium ion transport(GO:0006814)
0.5 18.1 GO:0006334 nucleosome assembly(GO:0006334)
0.5 1.9 GO:0009445 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.5 3.3 GO:0010155 regulation of proton transport(GO:0010155)
0.5 2.9 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.5 7.6 GO:0010039 response to iron ion(GO:0010039)
0.5 2.3 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.5 1.8 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.5 3.6 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.5 2.3 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.5 3.2 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.5 4.5 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.4 4.9 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.4 1.7 GO:0009304 tRNA transcription(GO:0009304)
0.4 26.8 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.4 12.5 GO:0009692 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.4 4.1 GO:0009942 longitudinal axis specification(GO:0009942)
0.4 2.9 GO:0015689 molybdate ion transport(GO:0015689)
0.4 1.6 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.4 2.0 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.4 2.0 GO:0032324 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.4 3.6 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.4 2.0 GO:0080009 mRNA methylation(GO:0080009)
0.4 3.2 GO:0043248 proteasome assembly(GO:0043248)
0.4 3.9 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.4 1.5 GO:0030259 lipid glycosylation(GO:0030259)
0.4 1.1 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.4 26.1 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.4 5.1 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.3 1.4 GO:0097298 regulation of nucleus size(GO:0097298)
0.3 5.5 GO:0009395 phospholipid catabolic process(GO:0009395)
0.3 1.0 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.3 1.3 GO:0009193 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.3 1.0 GO:0007019 microtubule depolymerization(GO:0007019)
0.3 17.4 GO:0055046 microgametogenesis(GO:0055046)
0.3 4.5 GO:0018401 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.3 1.0 GO:0042353 fucose metabolic process(GO:0006004) fucose biosynthetic process(GO:0042353)
0.3 1.0 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.3 8.5 GO:0031348 negative regulation of defense response(GO:0031348)
0.3 5.0 GO:0046132 pyrimidine ribonucleoside biosynthetic process(GO:0046132) pyrimidine nucleoside biosynthetic process(GO:0046134)
0.3 6.5 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.3 2.4 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.3 13.9 GO:0010256 endomembrane system organization(GO:0010256)
0.3 4.2 GO:0000103 sulfate assimilation(GO:0000103)
0.3 8.0 GO:0006012 galactose metabolic process(GO:0006012)
0.3 8.8 GO:0016575 histone deacetylation(GO:0016575)
0.3 2.9 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.3 2.6 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.3 13.7 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.3 2.3 GO:0031222 arabinan catabolic process(GO:0031222)
0.3 1.4 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.3 3.4 GO:0080112 seed growth(GO:0080112) regulation of seed growth(GO:0080113)
0.3 1.4 GO:0090114 localization within membrane(GO:0051668) COPII-coated vesicle budding(GO:0090114)
0.3 4.7 GO:0010252 auxin homeostasis(GO:0010252)
0.3 1.7 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.3 1.4 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.3 7.2 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.3 3.7 GO:0032365 intracellular lipid transport(GO:0032365)
0.3 1.6 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.3 9.5 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.3 3.8 GO:0006465 signal peptide processing(GO:0006465)
0.3 6.9 GO:0090421 embryonic meristem initiation(GO:0090421)
0.3 0.8 GO:1990169 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.2 4.5 GO:0008361 regulation of cell size(GO:0008361)
0.2 1.9 GO:0016926 protein desumoylation(GO:0016926)
0.2 17.2 GO:0032940 secretion by cell(GO:0032940)
0.2 5.3 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.2 1.0 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.2 10.2 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.2 94.3 GO:0044257 cellular protein catabolic process(GO:0044257)
0.2 3.5 GO:0071545 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.2 6.3 GO:0002239 response to oomycetes(GO:0002239)
0.2 22.2 GO:0010200 response to chitin(GO:0010200)
0.2 6.3 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.2 2.8 GO:0015743 malate transport(GO:0015743)
0.2 5.6 GO:0071805 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.2 7.9 GO:0009911 positive regulation of flower development(GO:0009911)
0.2 3.3 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.2 1.2 GO:0019509 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.2 2.3 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.2 17.5 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.2 3.8 GO:0071472 cellular response to salt stress(GO:0071472)
0.2 2.9 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.2 38.6 GO:0016192 vesicle-mediated transport(GO:0016192)
0.2 1.8 GO:0009088 threonine biosynthetic process(GO:0009088)
0.2 1.4 GO:0080060 integument development(GO:0080060)
0.2 1.9 GO:0016554 cytidine to uridine editing(GO:0016554)
0.2 3.9 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.2 0.7 GO:0031023 microtubule organizing center organization(GO:0031023)
0.2 1.6 GO:0036065 fucosylation(GO:0036065)
0.2 1.5 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 1.0 GO:0000338 protein deneddylation(GO:0000338)
0.1 3.1 GO:0035265 organ growth(GO:0035265)
0.1 0.4 GO:1901562 response to paraquat(GO:1901562)
0.1 0.8 GO:0000255 allantoin metabolic process(GO:0000255)
0.1 2.6 GO:0006415 translational termination(GO:0006415)
0.1 6.6 GO:0006342 chromatin silencing(GO:0006342)
0.1 23.6 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.1 36.9 GO:0016567 protein ubiquitination(GO:0016567)
0.1 14.8 GO:0006470 protein dephosphorylation(GO:0006470)
0.1 0.7 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 2.6 GO:0090332 stomatal closure(GO:0090332)
0.1 15.8 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.1 4.9 GO:0010051 xylem and phloem pattern formation(GO:0010051)
0.1 0.9 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 1.6 GO:0010229 inflorescence development(GO:0010229)
0.1 1.8 GO:0007031 peroxisome organization(GO:0007031)
0.1 2.3 GO:0006606 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.1 0.3 GO:0046864 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865) abscisic acid transport(GO:0080168)
0.1 4.3 GO:0009744 response to sucrose(GO:0009744)
0.1 1.1 GO:0017004 cytochrome complex assembly(GO:0017004)
0.1 0.6 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.1 11.3 GO:0006508 proteolysis(GO:0006508)
0.1 0.6 GO:1990937 xylan acetylation(GO:1990937)
0.1 3.3 GO:0009808 lignin metabolic process(GO:0009808)
0.1 0.2 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.0 0.3 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.0 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.0 GO:0051055 negative regulation of lipid metabolic process(GO:0045833) negative regulation of lipid biosynthetic process(GO:0051055)
0.0 1.0 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 1.8 GO:0006413 translational initiation(GO:0006413)
0.0 1.3 GO:0006414 translational elongation(GO:0006414)
0.0 0.5 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.8 GO:0018394 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.2 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.0 0.7 GO:0051607 defense response to virus(GO:0051607)
0.0 1.1 GO:0006626 protein targeting to mitochondrion(GO:0006626)
0.0 0.2 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015) inositol lipid-mediated signaling(GO:0048017)
0.0 0.7 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.3 GO:0051084 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
4.7 14.0 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
2.9 43.2 GO:0005801 cis-Golgi network(GO:0005801)
2.3 15.8 GO:0090395 plant cell papilla(GO:0090395)
2.2 2.2 GO:0031021 interphase microtubule organizing center(GO:0031021)
1.8 5.4 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
1.7 13.3 GO:0005956 protein kinase CK2 complex(GO:0005956)
1.3 3.9 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
1.2 4.7 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
1.1 14.8 GO:0000815 ESCRT III complex(GO:0000815)
1.0 12.0 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
1.0 10.6 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.9 2.8 GO:0030874 nucleolar chromatin(GO:0030874)
0.9 16.3 GO:0072686 mitotic spindle(GO:0072686)
0.9 2.7 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.9 16.8 GO:0031970 organelle envelope lumen(GO:0031970)
0.8 3.4 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.8 4.9 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.8 6.4 GO:0030127 COPII vesicle coat(GO:0030127)
0.8 20.1 GO:0000145 exocyst(GO:0000145)
0.8 3.1 GO:0000839 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.8 2.3 GO:0043657 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.8 4.5 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.7 6.6 GO:0000813 ESCRT I complex(GO:0000813)
0.7 22.9 GO:0000137 Golgi cis cisterna(GO:0000137)
0.7 2.1 GO:0033290 eukaryotic 48S preinitiation complex(GO:0033290)
0.7 7.4 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.7 4.6 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.6 9.6 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.6 7.2 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.6 4.2 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.6 6.9 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.6 62.1 GO:0000139 Golgi membrane(GO:0000139)
0.6 5.7 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.6 3.4 GO:0070552 BRISC complex(GO:0070552)
0.6 2.8 GO:0034657 GID complex(GO:0034657)
0.6 1.7 GO:0005846 nuclear cap binding complex(GO:0005846)
0.5 7.1 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.5 3.3 GO:0044545 NSL complex(GO:0044545)
0.5 2.1 GO:0033185 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.5 8.1 GO:0000786 nucleosome(GO:0000786)
0.5 7.0 GO:0005682 U5 snRNP(GO:0005682)
0.5 17.5 GO:0005764 lysosome(GO:0005764)
0.5 4.4 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.5 2.9 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.5 3.8 GO:0032153 cell division site(GO:0032153)
0.5 3.8 GO:0071011 precatalytic spliceosome(GO:0071011)
0.5 1.4 GO:0005652 nuclear lamina(GO:0005652)
0.5 4.5 GO:0072546 ER membrane protein complex(GO:0072546)
0.5 3.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.4 3.4 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.4 4.2 GO:0030665 clathrin vesicle coat(GO:0030125) clathrin-coated vesicle membrane(GO:0030665)
0.4 8.9 GO:0046540 U4/U6 x U5 tri-snRNP complex(GO:0046540)
0.4 5.9 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.4 3.9 GO:0005771 multivesicular body(GO:0005771)
0.4 8.1 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.4 3.7 GO:0033202 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.4 2.6 GO:0000243 commitment complex(GO:0000243)
0.4 2.6 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.4 17.1 GO:0010008 endosome membrane(GO:0010008)
0.4 8.4 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.4 24.7 GO:0005615 extracellular space(GO:0005615) extracellular region part(GO:0044421)
0.4 0.7 GO:0005640 nuclear outer membrane(GO:0005640)
0.4 1.1 GO:0033263 CORVET complex(GO:0033263)
0.3 3.1 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.3 14.8 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.3 5.0 GO:0031355 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.3 5.1 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.3 6.9 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.3 1.9 GO:0030117 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.3 15.0 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.2 3.4 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.2 2.4 GO:0010168 ER body(GO:0010168)
0.2 5.2 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.2 3.2 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.2 0.7 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 7.4 GO:0031201 SNARE complex(GO:0031201)
0.2 2.4 GO:0005663 DNA replication factor C complex(GO:0005663)
0.2 66.1 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.2 1.5 GO:0005787 signal peptidase complex(GO:0005787)
0.2 3.0 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.2 9.0 GO:0019898 extrinsic component of membrane(GO:0019898)
0.2 5.4 GO:0005680 anaphase-promoting complex(GO:0005680)
0.2 12.6 GO:0098687 chromosomal region(GO:0098687)
0.2 0.9 GO:0034515 proteasome storage granule(GO:0034515)
0.2 13.9 GO:0015629 actin cytoskeleton(GO:0015629)
0.2 3.2 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.2 0.7 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.2 1.8 GO:0000792 heterochromatin(GO:0000792)
0.2 10.4 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.2 2.4 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.1 2.0 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.1 1.1 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.1 1.0 GO:0044450 microtubule organizing center part(GO:0044450)
0.1 5.0 GO:0005819 spindle(GO:0005819)
0.1 24.1 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.1 0.6 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 1.7 GO:0005686 U2 snRNP(GO:0005686)
0.1 69.3 GO:0005783 endoplasmic reticulum(GO:0005783)
0.1 1.1 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 1.0 GO:0008180 COP9 signalosome(GO:0008180)
0.1 14.8 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.1 2.0 GO:0034708 methyltransferase complex(GO:0034708)
0.1 0.8 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 7.1 GO:0000790 nuclear chromatin(GO:0000790)
0.1 7.9 GO:0005740 mitochondrial envelope(GO:0005740)
0.1 1.8 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 0.3 GO:0070505 pollen coat(GO:0070505)
0.1 3.6 GO:0005887 integral component of plasma membrane(GO:0005887)
0.1 3.5 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.1 5.2 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.1 0.3 GO:0009368 endopeptidase Clp complex(GO:0009368)
0.1 4.7 GO:0005759 mitochondrial matrix(GO:0005759)
0.1 1.7 GO:0032040 small-subunit processome(GO:0032040)
0.1 455.7 GO:0005634 nucleus(GO:0005634)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
12.7 38.1 GO:0052627 4-aminobenzoate amino acid synthetase activity(GO:0052625) benzoate amino acid synthetase activity(GO:0052626) vanillate amino acid synthetase activity(GO:0052627) 4-hydroxybenzoate amino acid synthetase activity(GO:0052628)
10.1 40.3 GO:0046593 mandelonitrile lyase activity(GO:0046593)
7.3 21.8 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
5.4 16.3 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
5.0 45.0 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
4.5 4.5 GO:0030620 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
3.8 50.0 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
3.8 11.5 GO:0015292 uniporter activity(GO:0015292)
3.8 15.3 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
3.7 36.9 GO:0004351 glutamate decarboxylase activity(GO:0004351)
3.6 10.9 GO:0050736 O-malonyltransferase activity(GO:0050736)
3.6 10.8 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
3.1 15.4 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
2.9 8.8 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
2.9 8.6 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
2.8 14.0 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
2.8 8.3 GO:0031071 cysteine desulfurase activity(GO:0031071)
2.6 10.3 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
2.5 7.6 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
2.5 15.2 GO:0004126 cytidine deaminase activity(GO:0004126)
2.5 7.5 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
2.5 7.5 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
2.4 7.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
2.4 14.1 GO:0030544 Hsp70 protein binding(GO:0030544)
2.3 6.9 GO:0008909 isochorismate synthase activity(GO:0008909)
2.2 6.7 GO:0035671 enone reductase activity(GO:0035671)
2.2 11.0 GO:0003680 AT DNA binding(GO:0003680)
2.0 2.0 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
1.9 5.7 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
1.9 5.6 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
1.8 30.9 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
1.7 18.9 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
1.6 31.3 GO:0015248 sterol transporter activity(GO:0015248)
1.6 6.6 GO:0070006 metalloaminopeptidase activity(GO:0070006)
1.6 15.9 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
1.6 14.0 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
1.6 26.4 GO:0016157 sucrose synthase activity(GO:0016157)
1.5 4.6 GO:0005344 oxygen transporter activity(GO:0005344)
1.5 10.6 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
1.5 20.8 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
1.5 5.9 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
1.5 13.2 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
1.4 2.9 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
1.4 14.3 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
1.2 11.2 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
1.2 3.7 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
1.2 23.4 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
1.2 14.2 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
1.2 7.1 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
1.1 5.7 GO:0033897 ribonuclease T2 activity(GO:0033897)
1.1 11.1 GO:0004602 glutathione peroxidase activity(GO:0004602)
1.1 11.0 GO:0035198 miRNA binding(GO:0035198)
1.1 22.0 GO:0008146 sulfotransferase activity(GO:0008146)
1.0 8.3 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
1.0 6.1 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
1.0 3.0 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
1.0 3.0 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
1.0 5.8 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
1.0 4.8 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
1.0 25.9 GO:0051787 misfolded protein binding(GO:0051787)
0.9 16.1 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.9 3.7 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.9 12.9 GO:0030414 peptidase inhibitor activity(GO:0030414)
0.9 2.7 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.9 9.8 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.9 8.0 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.9 17.1 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.8 3.4 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.8 12.5 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.8 5.7 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.8 3.2 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.8 2.4 GO:0019003 GDP binding(GO:0019003)
0.8 18.5 GO:0097602 cullin family protein binding(GO:0097602)
0.8 15.1 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.8 6.9 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.8 2.3 GO:0032131 alkylated DNA binding(GO:0032131)
0.8 7.6 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.8 11.3 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.7 9.6 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.7 2.2 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.7 10.8 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.7 7.8 GO:1902936 phosphatidylinositol bisphosphate binding(GO:1902936)
0.7 3.3 GO:0004594 pantothenate kinase activity(GO:0004594)
0.7 13.9 GO:0019212 phosphatase inhibitor activity(GO:0019212)
0.7 7.9 GO:0004467 acyl-CoA ligase activity(GO:0003996) long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.7 3.3 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.7 7.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.6 21.3 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.6 8.2 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.6 4.3 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.6 1.8 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.6 6.4 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.6 74.5 GO:0046982 protein heterodimerization activity(GO:0046982)
0.5 2.2 GO:0004057 arginyltransferase activity(GO:0004057)
0.5 31.8 GO:0043130 ubiquitin-like protein binding(GO:0032182) ubiquitin binding(GO:0043130)
0.5 1.6 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.5 2.1 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.5 2.6 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.5 2.1 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.5 76.8 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.5 2.0 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.5 1.9 GO:0070138 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.5 4.8 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.5 3.4 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.5 3.8 GO:0033613 activating transcription factor binding(GO:0033613)
0.5 3.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.5 2.3 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.5 3.6 GO:0016208 AMP binding(GO:0016208)
0.4 4.9 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.4 18.7 GO:0003713 transcription coactivator activity(GO:0003713)
0.4 1.8 GO:0004385 guanylate kinase activity(GO:0004385)
0.4 4.4 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.4 7.0 GO:0016408 C-acyltransferase activity(GO:0016408)
0.4 4.7 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.4 3.0 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.4 48.5 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.4 2.5 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.4 1.7 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.4 2.9 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.4 6.1 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.4 6.0 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.4 17.2 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.4 16.3 GO:0004364 glutathione transferase activity(GO:0004364)
0.4 6.2 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.4 32.3 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.4 3.4 GO:0005548 phospholipid transporter activity(GO:0005548)
0.4 2.6 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.4 5.4 GO:0008327 methyl-CpG binding(GO:0008327)
0.4 2.5 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.4 3.9 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.4 24.0 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.3 17.1 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.3 8.7 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.3 19.2 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.3 65.1 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.3 20.7 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.3 5.1 GO:0051879 Hsp90 protein binding(GO:0051879)
0.3 5.1 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.3 4.7 GO:0008097 5S rRNA binding(GO:0008097)
0.3 3.3 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.3 1.3 GO:0033862 UMP kinase activity(GO:0033862)
0.3 23.6 GO:0019901 protein kinase binding(GO:0019901)
0.3 3.3 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.3 0.7 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.3 3.3 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.3 3.8 GO:0008252 nucleotidase activity(GO:0008252)
0.3 2.0 GO:0032977 membrane insertase activity(GO:0032977)
0.3 3.2 GO:0070300 phosphatidic acid binding(GO:0070300)
0.3 15.9 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.3 2.8 GO:0016885 CoA carboxylase activity(GO:0016421) ligase activity, forming carbon-carbon bonds(GO:0016885)
0.3 1.4 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.3 10.7 GO:0004702 receptor signaling protein serine/threonine kinase activity(GO:0004702)
0.3 5.1 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.3 4.5 GO:0035064 methylated histone binding(GO:0035064)
0.3 9.4 GO:0016597 amino acid binding(GO:0016597)
0.3 4.8 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.2 1.2 GO:0008477 purine nucleosidase activity(GO:0008477)
0.2 7.0 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.2 2.6 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.2 9.1 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.2 0.9 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.2 2.7 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.2 0.9 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.2 2.6 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.2 1.8 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.2 25.9 GO:0005516 calmodulin binding(GO:0005516)
0.2 9.2 GO:0043621 protein self-association(GO:0043621)
0.2 1.0 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.2 3.5 GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity(GO:0004439) phosphatidylinositol phosphate 5-phosphatase activity(GO:0034595)
0.2 1.3 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.2 2.7 GO:0000149 SNARE binding(GO:0000149)
0.2 90.8 GO:0001067 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.2 3.3 GO:0015179 L-amino acid transmembrane transporter activity(GO:0015179)
0.2 2.6 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.2 3.2 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.2 20.2 GO:0003779 actin binding(GO:0003779)
0.2 4.1 GO:0016776 phosphotransferase activity, phosphate group as acceptor(GO:0016776)
0.1 3.1 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 8.1 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.1 0.4 GO:0034593 phosphatidylinositol bisphosphate phosphatase activity(GO:0034593)
0.1 2.8 GO:0005253 anion channel activity(GO:0005253)
0.1 5.9 GO:0017137 Rab GTPase binding(GO:0017137)
0.1 0.7 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 9.3 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.1 6.9 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 6.0 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.1 8.2 GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism(GO:0015662)
0.1 4.1 GO:0051540 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.1 4.1 GO:0016838 carbon-oxygen lyase activity, acting on phosphates(GO:0016838)
0.1 4.1 GO:0043022 ribosome binding(GO:0043022)
0.1 5.1 GO:0042393 histone binding(GO:0042393)
0.1 1.3 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 5.8 GO:0005484 SNAP receptor activity(GO:0005484)
0.1 34.0 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.1 0.7 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 1.6 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 0.6 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.1 1.3 GO:0009975 cyclase activity(GO:0009975)
0.1 1.1 GO:0004629 phospholipase C activity(GO:0004629)
0.1 1.0 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 4.3 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 2.2 GO:0050897 cobalt ion binding(GO:0050897)
0.1 10.6 GO:0043531 ADP binding(GO:0043531)
0.1 1.9 GO:0005096 GTPase activator activity(GO:0005096)
0.1 0.8 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 4.2 GO:0019001 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 3.1 GO:0051082 unfolded protein binding(GO:0051082)
0.0 6.2 GO:0005507 copper ion binding(GO:0005507)
0.0 0.4 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 2.0 GO:0016831 carboxy-lyase activity(GO:0016831)
0.0 0.5 GO:0060590 ATPase regulator activity(GO:0060590)
0.0 0.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.2 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.0 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.1 GO:0004834 tryptophan synthase activity(GO:0004834)
0.0 0.3 GO:0030276 clathrin binding(GO:0030276)
0.0 0.6 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.3 GO:0008810 cellulase activity(GO:0008810)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 4.2 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.3 2.1 PID P73PATHWAY p73 transcription factor network
0.3 1.2 PID PDGFRA PATHWAY PDGFR-alpha signaling pathway
0.3 2.4 PID ATR PATHWAY ATR signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
5.6 16.9 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
1.4 4.2 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
1.4 8.3 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
1.3 8.0 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
1.0 3.0 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.6 5.1 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.5 2.7 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.5 2.0 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.5 1.5 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.4 2.8 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.3 2.4 REACTOME TRANSCRIPTION COUPLED NER TC NER Genes involved in Transcription-coupled NER (TC-NER)
0.2 2.1 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.1 0.4 REACTOME PI METABOLISM Genes involved in PI Metabolism