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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G04038

Z-value: 2.10

Transcription factors associated with AT2G04038

Gene Symbol Gene ID Gene Info
AT2G04038
AT2G04038 basic leucine-zipper 48

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
bZIP48arTal_v1_Chr2_+_1331919_1331919-0.599.5e-04Click!

Activity profile of AT2G04038 motif

Sorted Z-values of AT2G04038 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_10255906 19.71 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
Chr1_+_3157501 16.17 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr2_+_14577083 14.86 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr5_+_26298728 14.70 AT5G65730.1
XTH6
xyloglucan endotransglucosylase/hydrolase 6
Chr1_-_59215 12.39 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr1_-_1043887 10.94 AT1G04040.1
AT1G04040
HAD superfamily, subfamily IIIB acid phosphatase
Chr3_+_23345754 10.63 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr1_-_4530222 10.51 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr1_+_7886323 10.08 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_+_19454798 9.97 AT1G52230.1
PSAH2
photosystem I subunit H2
Chr2_-_15789605 9.80 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr2_-_15790139 9.79 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr2_+_19243348 9.71 AT2G46820.1
AT2G46820.2
PSI-P
photosystem I P subunit
Chr1_-_84864 9.52 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr1_-_4265156 9.09 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr3_-_5469594 8.69 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr3_-_2130451 8.60 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr2_+_266559 8.59 AT2G01590.1
AT2G01590.2
CRR3
chlororespiratory reduction 3
Chr1_+_10810877 8.54 AT1G30520.4
AT1G30520.3
AAE14
acyl-activating enzyme 14
Chr1_-_28603932 8.52 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr5_+_16410782 8.29 AT5G40950.1
RPL27
ribosomal protein large subunit 27
Chr1_+_10810397 8.27 AT1G30520.1
AT1G30520.2
AAE14
acyl-activating enzyme 14
Chr4_+_160643 8.05 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr5_+_16768935 7.99 AT5G41900.1
AT5G41900
alpha/beta-Hydrolases superfamily protein
Chr1_+_2047886 7.97 AT1G06680.2
PSBP-1
photosystem II subunit P-1
Chr1_+_2047634 7.96 AT1G06680.1
PSBP-1
photosystem II subunit P-1
Chr4_-_14204061 7.87 AT4G28750.1
PSAE-1
Photosystem I reaction centre subunit IV / PsaE protein
Chr3_-_18628888 7.85 AT3G50240.3
AT3G50240.2
AT3G50240.4
AT3G50240.1
KICP-02
ATP binding microtubule motor family protein
Chr5_-_7738535 7.81 AT5G23060.2
AT5G23060.1
CaS
calcium sensing receptor
Chr5_+_20945676 7.80 AT5G51560.1
AT5G51560
Leucine-rich repeat protein kinase family protein
Chr1_-_16709713 7.54 AT1G44000.1
AT1G44000
STAY-GREEN-like protein
Chr4_+_813048 7.28 AT4G01883.1
AT4G01883.3
AT4G01883.2
AT4G01883
Polyketide cyclase / dehydrase and lipid transport protein
Chr5_-_18588792 7.03 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
Chr1_+_28078852 6.96 AT1G74730.1
AT1G74730
transmembrane protein, putative (DUF1118)
Chr2_+_19145218 6.80 AT2G46630.1
AT2G46630
serine/arginine repetitive matrix protein
Chr2_+_19469571 6.66 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_18559326 6.48 AT3G50060.1
MYB77
myb domain protein 77
Chr2_-_18914739 6.44 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr5_-_14199431 6.41 AT5G36120.1
CCB3
cofactor assembly, complex C (B6F)
Chr3_+_7280792 6.41 AT3G20820.1
AT3G20820
Leucine-rich repeat (LRR) family protein
Chr2_-_7768040 6.35 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
Chr4_+_455768 6.32 AT4G01050.1
TROL
thylakoid rhodanese-like protein
Chr5_-_4430901 6.32 AT5G13730.1
SIG4
sigma factor 4
Chr4_+_455583 6.31 AT4G01050.2
TROL
thylakoid rhodanese-like protein
Chr1_-_6278150 6.26 AT1G18250.2
AT1G18250.1
ATLP-1
Pathogenesis-related thaumatin superfamily protein
Chr5_-_20779464 6.24 AT5G51110.2
AT5G51110.1
AT5G51110
Transcriptional coactivator/pterin dehydratase
Chr5_+_20900859 6.15 AT5G51460.1
AT5G51460.4
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_26572265 6.15 AT5G66580.1
AT5G66580
hypothetical protein
Chr4_+_14566183 6.03 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4
Chr4_-_9754161 5.98 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr4_-_16773456 5.96 AT4G35250.1
HCF244
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_20902087 5.89 AT5G51460.2
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_-_10129937 5.87 AT3G27360.1
AT3G27360
Histone superfamily protein
Chr5_+_24940203 5.85 AT5G62100.2
AT5G62100.4
AT5G62100.3
AT5G62100.5
AT5G62100.6
AT5G62100.1
BAG2
BCL-2-associated athanogene 2
Chr2_+_16912805 5.85 AT2G40490.1
HEME2
Uroporphyrinogen decarboxylase
Chr2_+_16049918 5.79 AT2G38310.1
PYL4
PYR1-like 4
Chr4_+_12006986 5.77 AT4G22890.3
AT4G22890.4
AT4G22890.5
AT4G22890.1
AT4G22890.2
PGR5-LIKE A
PGR5-LIKE A
Chr5_+_20901835 5.75 AT5G51460.5
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_7243002 5.74 AT5G21930.3
AT5G21930.1
AT5G21930.4
AT5G21930.2
PAA2
P-type ATPase of Arabidopsis 2
Chr3_-_8533834 5.73 AT3G23700.1
AT3G23700
Nucleic acid-binding proteins superfamily
Chr4_-_17979740 5.71 AT4G38400.1
AT4G38401.1
EXLA2
AT4G38401
expansin-like A2
hypothetical protein
Chr4_-_9305763 5.70 AT4G16515.1
AT4G16515.2
RGF6
root meristem growth factor
Chr5_+_20901537 5.66 AT5G51460.3
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_-_14627631 5.56 AT4G29905.1
AT4G29905
hypothetical protein
Chr5_+_26281642 5.54 AT5G65700.1
AT5G65700.2
BAM1
Leucine-rich receptor-like protein kinase family protein
Chr4_+_1415953 5.53 AT4G03210.2
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr1_-_3272110 5.52 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
Chr2_+_16869189 5.50 AT2G40400.1
AT2G40400.2
AT2G40400.3
AT2G40400
DUF399 family protein, putative (DUF399 and DUF3411)
Chr2_+_8736734 5.47 AT2G20260.1
PSAE-2
photosystem I subunit E-2
Chr2_-_12355480 5.42 AT2G28790.1
AT2G28790.2
AT2G28790
Pathogenesis-related thaumatin superfamily protein
Chr1_-_29716255 5.41 AT1G78995.1
AT1G78995
hypothetical protein
Chr4_-_16606135 5.39 AT4G34830.1
MRL1
Pentatricopeptide repeat (PPR) superfamily protein
Chr1_+_4934120 5.38 AT1G14430.1
AT1G14430
glyoxal oxidase-related protein
Chr1_+_564018 5.35 AT1G02640.1
BXL2
beta-xylosidase 2
Chr5_+_7676938 5.09 AT5G22940.2
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr1_-_26293173 5.08 AT1G69830.1
AMY3
alpha-amylase-like 3
Chr4_+_17524461 5.08 AT4G37240.1
AT4G37240
HTH-type transcriptional regulator
Chr1_+_29735952 5.07 AT1G79040.1
PSBR
photosystem II subunit R
Chr4_+_1415617 5.05 AT4G03210.1
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr3_+_20890235 5.03 AT3G56330.1
AT3G56330
N2,N2-dimethylguanosine tRNA methyltransferase
Chr2_+_11041331 5.02 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr3_+_5267063 5.00 AT3G15548.1
AT3G15550.1
AT3G15548
AT3G15550
transmembrane protein
trichohyalin
Chr3_-_3003454 4.87 AT3G09780.1
CCR1
CRINKLY4 related 1
Chr5_+_7676662 4.86 AT5G22940.1
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr4_+_15875342 4.84 AT4G32890.1
GATA9
GATA transcription factor 9
Chr5_+_2202364 4.83 AT5G07090.1
AT5G07090.3
AT5G07090.2
AT5G07090
Ribosomal protein S4 (RPS4A) family protein
Chr3_-_4775258 4.83 AT3G14310.1
PME3
pectin methylesterase 3
Chr2_+_15617635 4.79 AT2G37180.1
RD28
Aquaporin-like superfamily protein
Chr5_+_26354853 4.72 AT5G65890.2
AT5G65890.3
AT5G65890.1
ACR1
ACT domain repeat 1
Chr1_+_25493193 4.71 AT1G68010.1
AT1G68010.2
AT1G68010.3
HPR
hydroxypyruvate reductase
Chr5_+_19179881 4.70 AT5G47230.1
ERF5
ethylene responsive element binding factor 5
Chr2_+_18842516 4.68 AT2G45750.1
AT2G45750
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_22808641 4.66 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr5_-_17650375 4.66 AT5G43890.1
YUC5
Flavin-binding monooxygenase family protein
Chr3_-_7231194 4.65 AT3G20680.1
AT3G20680
plant/protein (DUF1995)
Chr5_+_16435906 4.55 AT5G41060.4
AT5G41060.2
AT5G41060
DHHC-type zinc finger family protein
Chr3_-_5485187 4.44 AT3G16180.1
AT3G16180
Major facilitator superfamily protein
Chr3_+_23334574 4.42 AT3G63170.1
FAP1
Chalcone-flavanone isomerase family protein
Chr4_-_18472048 4.29 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr1_-_8935544 4.27 AT1G25440.1
BBX15
B-box type zinc finger protein with CCT domain-containing protein
Chr1_-_24653998 4.22 AT1G66190.1
AT1G66190
hypothetical protein
Chr5_+_26356126 4.20 AT5G65890.5
ACR1
ACT domain repeat 1
Chr2_+_11380463 4.20 AT2G26710.1
BAS1
Cytochrome P450 superfamily protein
Chr5_+_26355873 4.18 AT5G65890.4
ACR1
ACT domain repeat 1
Chr3_+_4403355 4.17 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
Chr5_-_23785512 4.02 AT5G58900.1
AT5G58900
Homeodomain-like transcriptional regulator
Chr5_+_6947789 3.98 AT5G20540.1
BRXL4
BREVIS RADIX-like 4
Chr1_-_23634073 3.94 AT1G63710.1
CYP86A7
cytochrome P450, family 86, subfamily A, polypeptide 7
Chr1_+_27786864 3.93 AT1G73885.1
AT1G73885
AT-rich interactive domain protein
Chr4_+_12686459 3.92 AT4G24570.1
DIC2
dicarboxylate carrier 2
Chr2_-_15066001 3.90 AT2G35880.2
AT2G35880.1
AT2G35880.3
AT2G35880
TPX2 (targeting protein for Xklp2) protein family
Chr1_-_29715017 3.83 AT1G78990.1
AT1G78990
HXXXD-type acyl-transferase family protein
Chr1_+_6142402 3.82 AT1G17840.1
ABCG11
white-brown complex-like protein
Chr2_+_16349968 3.79 AT2G39190.1
AT2G39190.2
ATATH8
Protein kinase superfamily protein
Chr5_-_25029933 3.79 AT5G62320.1
MYB99
myb domain protein 99
Chr3_+_17115483 3.69 AT3G46490.1
AT3G46490.2
AT3G46490
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_5033933 3.68 AT5G15510.3
AT5G15510.1
AT5G15510.4
AT5G15510.2
AT5G15510
TPX2 (targeting protein for Xklp2) protein family
Chr1_-_105330 3.67 AT1G01250.1
AT1G01250
Integrase-type DNA-binding superfamily protein
Chr1_-_3481041 3.66 AT1G10550.1
XTH33
xyloglucan:xyloglucosyl transferase 33
Chr2_+_9354842 3.64 AT2G21960.1
AT2G21960
transmembrane protein
Chr4_+_1329548 3.63 AT4G03010.1
AT4G03010
RNI-like superfamily protein
Chr3_-_20086967 3.62 AT3G54260.1
TBL36
TRICHOME BIREFRINGENCE-LIKE 36
Chr1_-_28383769 3.62 AT1G75590.1
AT1G75590
SAUR-like auxin-responsive protein family
Chr5_-_5529940 3.62 AT5G16810.2
AT5G16810.1
AT5G16810
Protein kinase superfamily protein
Chr1_+_6904963 3.60 AT1G19890.1
MGH3
male-gamete-specific histone H3
Chr4_+_17583992 3.57 AT4G37400.1
CYP81F3
cytochrome P450, family 81, subfamily F, polypeptide 3
Chr1_+_26157702 3.57 AT1G69560.2
AT1G69560.1
MYB105
myb domain protein 105
Chr1_+_19173880 3.55 AT1G51700.1
DOF1
DOF zinc finger protein 1
Chr4_+_222289 3.54 AT4G00490.1
BAM2
beta-amylase 2
Chr5_+_16435700 3.50 AT5G41060.3
AT5G41060
DHHC-type zinc finger family protein
Chr3_+_18155416 3.50 AT3G48980.1
AT3G48980
O-glucosyltransferase rumi-like protein (DUF821)
Chr5_+_16435153 3.49 AT5G41060.1
AT5G41060
DHHC-type zinc finger family protein
Chr4_-_6796398 3.48 AT4G11140.1
CRF1
cytokinin response factor 1
Chr3_+_8997370 3.48 AT3G24650.1
ABI3
AP2/B3-like transcriptional factor family protein
Chr3_+_18155087 3.47 AT3G48980.2
AT3G48980
O-glucosyltransferase rumi-like protein (DUF821)
Chr3_-_6457509 3.47 AT3G18750.1
AT3G18750.6
AT3G18750.3
AT3G18750.4
WNK6
with no lysine (K) kinase 6
Chr1_+_25861094 3.46 AT1G68810.1
AT1G68810
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_2455593 3.45 AT5G07720.1
XXT3
Galactosyl transferase GMA12/MNN10 family protein
Chr5_+_21477116 3.45 AT5G52960.1
AT5G52960
tRNA dimethylallyltransferase
Chr5_-_19224591 3.45 AT5G47380.1
AT5G47380.4
AT5G47380.3
AT5G47380.2
AT5G47380
electron transporter, putative (Protein of unknown function, DUF547)
Chr3_+_6187267 3.45 AT3G18070.3
AT3G18070.1
AT3G18070.4
AT3G18070.5
AT3G18070.2
BGLU43
beta glucosidase 43
Chr1_+_3951553 3.45 AT1G11720.1
SS3
starch synthase 3
Chr2_+_17044932 3.41 AT2G40840.1
DPE2
disproportionating enzyme 2
Chr1_+_799115 3.40 AT1G03270.1
AT1G03270
CBS domain protein with a domain protein (DUF21)
Chr1_+_3951366 3.40 AT1G11720.2
SS3
starch synthase 3
Chr4_-_1178489 3.38 AT4G02670.1
AT4G02670.2
IDD12
indeterminate(ID)-domain 12
Chr5_+_20511642 3.38 AT5G50375.3
AT5G50375.1
AT5G50375.2
CPI1
cyclopropyl isomerase
Chr2_-_422643 3.37 AT2G01913.1
AT2G01913
hypothetical protein
Chr4_+_16134366 3.35 AT4G33550.2
AT4G33550.1
AT4G33550
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_6493512 3.34 AT2G15020.1
AT2G15020
hypothetical protein
Chr1_-_6308010 3.33 AT1G18330.2
EPR1
Homeodomain-like superfamily protein
Chr1_-_28194068 3.32 AT1G75100.1
JAC1
J-domain protein required for chloroplast accumulation response 1
Chr1_-_6308243 3.30 AT1G18330.1
EPR1
Homeodomain-like superfamily protein
Chr5_+_19174589 3.30 AT5G47225.1
AT5G47225

Chr1_+_6474802 3.27 AT1G18773.3
AT1G18773.2
AT1G18773.1
AT1G18773.4
AT1G18773
acyl thioesterase-like protein
Chr2_+_17728479 3.25 AT2G42580.1
TTL3
tetratricopetide-repeat thioredoxin-like 3
Chr3_-_19805663 3.24 AT3G53420.2
AT3G53420.1
PIP2A
plasma membrane intrinsic protein 2A
Chr5_-_6313372 3.22 AT5G18930.1
BUD2
Adenosylmethionine decarboxylase family protein
Chr5_+_6746814 3.21 AT5G19970.1
AT5G19970.2
AT5G19970
GRAS family transcription factor family protein
Chr3_-_18215743 3.17 AT3G49140.1
AT3G49140
Pentatricopeptide repeat (PPR) superfamily protein
Chr3_-_20651443 3.17 AT3G55660.2
AT3G55660.1
ROPGEF6
ROP (rho of plants) guanine nucleotide exchange factor 6
Chr5_+_2563366 3.14 AT5G08000.1
AT5G08000.2
E13L3
glucan endo-1,3-beta-glucosidase-like protein 3
Chr5_-_22660494 3.14 AT5G55950.3
AT5G55950.2
AT5G55950.1
AT5G55950
Nucleotide/sugar transporter family protein
Chr5_+_6531529 3.11 AT5G19390.2
AT5G19390.1
AT5G19390.4
AT5G19390.3
AT5G19390
Rho GTPase activation protein (RhoGAP) with PH domain-containing protein
Chr2_-_19222916 3.08 AT2G46770.1
NST1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr4_-_18451293 3.08 AT4G39770.2
AT4G39770.1
TPPH
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_17798262 3.06 AT5G44190.2
AT5G44190.1
GLK2
GOLDEN2-like 2
Chr5_-_1558486 3.05 AT5G05250.1
AT5G05250
hypothetical protein
Chr1_+_26329863 3.00 AT1G69910.1
AT1G69910
Protein kinase superfamily protein
Chr1_+_18513624 3.00 AT1G49990.1
AT1G49990
F-box family protein
Chr5_-_6363413 2.97 AT5G19040.3
IPT5
isopentenyltransferase 5
Chr1_-_28682062 2.96 AT1G76430.1
PHT1%3B9
phosphate transporter 1;9
Chr1_+_27402814 2.96 AT1G72820.1
AT1G72820.2
AT1G72820
Mitochondrial substrate carrier family protein
Chr1_+_618061 2.95 AT1G02810.1
AT1G02810
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_-_6165820 2.91 AT1G17920.1
AT1G17920.2
HDG12
homeodomain GLABROUS 12
Chr1_-_23368369 2.90 AT1G63030.2
AT1G63030.1
ddf2
Integrase-type DNA-binding superfamily protein
Chr4_-_8390833 2.87 AT4G14620.1
AT4G14620
hypothetical protein (DUF506)
Chr5_+_8058568 2.84 AT5G23890.2
AT5G23890.1
AT5G23890
GPI-anchored adhesin-like protein
Chr1_-_1572469 2.84 AT1G05370.1
AT1G05370
Sec14p-like phosphatidylinositol transfer family protein
Chr1_+_218834 2.83 AT1G01600.1
CYP86A4
cytochrome P450, family 86, subfamily A, polypeptide 4
Chr3_-_6456996 2.83 AT3G18750.5
WNK6
with no lysine (K) kinase 6
Chr2_-_8084960 2.82 AT2G18640.1
GGPS4
geranylgeranyl pyrophosphate synthase 4
Chr3_-_3091766 2.82 AT3G10020.2
AT3G10020
plant/protein
Chr1_-_25678468 2.78 AT1G68470.1
AT1G68470
Exostosin family protein
Chr3_-_6457312 2.76 AT3G18750.2
WNK6
with no lysine (K) kinase 6
Chr5_-_22660026 2.75 AT5G55950.4
AT5G55950
Nucleotide/sugar transporter family protein
Chr5_-_6363682 2.75 AT5G19040.2
AT5G19040.1
IPT5
isopentenyltransferase 5
Chr3_-_2394550 2.73 AT3G07510.2
AT3G07510.3
AT3G07510.1
AT3G07510
maternal effect embryo arrest protein
Chr1_+_26450166 2.73 AT1G70230.1
TBL27
TRICHOME BIREFRINGENCE-LIKE 27
Chr5_+_1461786 2.72 AT5G04960.1
AT5G04960
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_-_18193729 2.71 AT3G49070.1
AT3G49070.2
AT3G49070
transmembrane protein, putative (DUF677)
Chr2_+_19386966 2.71 AT2G47230.1
AT2G47230.2
DUF6
agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 6)
Chr2_+_8545634 2.69 AT2G19806.1
AT2G19806

Chr1_+_25558794 2.68 AT1G68190.2
AT1G68190.3
BBX27
B-box zinc finger family protein
Chr3_-_3091922 2.68 AT3G10020.1
AT3G10020
plant/protein
Chr5_-_23992908 2.67 AT5G59520.1
ZIP2
ZRT/IRT-like protein 2
Chr5_-_16363454 2.64 AT5G40840.5
SYN2
Rad21/Rec8-like family protein
Chr2_+_18981911 2.64 AT2G46225.3
AT2G46225.2
AT2G46225.1
ABIL1
ABI-1-like 1
Chr3_+_6188132 2.63 AT3G18070.7
AT3G18070.6
BGLU43
beta glucosidase 43
Chr2_-_12343443 2.61 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G04038

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.3 19.7 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769) positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
2.3 9.1 GO:0010480 microsporocyte differentiation(GO:0010480)
1.8 12.6 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
1.8 5.4 GO:0048255 mRNA stabilization(GO:0048255)
1.6 7.8 GO:0071277 cellular response to calcium ion(GO:0071277)
1.4 4.3 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
1.4 16.8 GO:0042374 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
1.3 24.1 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
1.3 3.8 GO:0080051 cutin transport(GO:0080051)
1.1 3.2 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
1.0 19.6 GO:0006949 syncytium formation(GO:0006949)
0.9 2.8 GO:0051639 actin filament network formation(GO:0051639)
0.9 6.5 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.9 3.7 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.9 3.4 GO:0000023 maltose metabolic process(GO:0000023)
0.8 12.4 GO:0030497 fatty acid elongation(GO:0030497)
0.8 3.2 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.8 12.1 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.8 6.4 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.8 7.7 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.7 0.7 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.7 5.4 GO:0031222 arabinan catabolic process(GO:0031222)
0.6 4.7 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.6 19.4 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.6 6.8 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.6 2.8 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.5 5.7 GO:0006825 copper ion transport(GO:0006825)
0.5 2.6 GO:0010226 response to lithium ion(GO:0010226)
0.5 1.5 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.5 4.4 GO:0071219 cellular response to molecule of bacterial origin(GO:0071219)
0.5 4.8 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.5 9.3 GO:0009901 anther dehiscence(GO:0009901)
0.5 17.0 GO:0009827 plant-type cell wall modification(GO:0009827)
0.5 11.0 GO:0010207 photosystem II assembly(GO:0010207)
0.4 3.5 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.4 7.8 GO:0007052 mitotic spindle organization(GO:0007052)
0.4 5.5 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.4 3.3 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.3 5.8 GO:0046501 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.3 2.3 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.3 7.1 GO:0009269 response to desiccation(GO:0009269)
0.3 5.9 GO:0050821 protein stabilization(GO:0050821)
0.3 0.6 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.3 18.6 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.3 4.8 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.3 3.3 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.3 2.9 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.3 0.8 GO:0010028 xanthophyll cycle(GO:0010028)
0.3 5.0 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.3 2.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.3 4.3 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.3 2.0 GO:0009061 anaerobic respiration(GO:0009061)
0.2 3.9 GO:0005983 starch catabolic process(GO:0005983)
0.2 17.5 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.2 10.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.2 3.1 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.2 0.7 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 0.9 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.2 1.1 GO:0046622 positive regulation of organ growth(GO:0046622)
0.2 17.4 GO:0009627 systemic acquired resistance(GO:0009627)
0.2 5.7 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.2 5.7 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.2 0.8 GO:0015739 sialic acid transport(GO:0015739)
0.2 2.9 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 4.5 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.1 7.0 GO:0009851 auxin biosynthetic process(GO:0009851)
0.1 10.8 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.1 2.2 GO:0046688 response to copper ion(GO:0046688)
0.1 1.1 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 3.3 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.1 2.5 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 2.7 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 3.4 GO:0009958 positive gravitropism(GO:0009958)
0.1 3.6 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.1 3.0 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 7.0 GO:0045490 pectin catabolic process(GO:0045490)
0.1 2.6 GO:0030838 positive regulation of actin filament polymerization(GO:0030838) actin nucleation(GO:0045010)
0.1 1.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 0.9 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.1 0.9 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 1.0 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.1 3.2 GO:0010286 heat acclimation(GO:0010286)
0.1 1.8 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.1 0.8 GO:0015914 phospholipid transport(GO:0015914)
0.1 6.3 GO:0071482 cellular response to light stimulus(GO:0071482)
0.1 0.9 GO:0009649 entrainment of circadian clock(GO:0009649)
0.1 2.0 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 4.1 GO:0009809 lignin biosynthetic process(GO:0009809)
0.1 1.4 GO:0048768 root hair cell tip growth(GO:0048768)
0.1 3.4 GO:0009698 phenylpropanoid metabolic process(GO:0009698)
0.1 12.3 GO:0006631 fatty acid metabolic process(GO:0006631)
0.1 1.6 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.8 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.2 GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement(GO:1901527)
0.0 0.6 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.0 2.1 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.2 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.0 0.7 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 13.1 GO:0006412 translation(GO:0006412)
0.0 0.3 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.0 0.9 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 1.7 GO:0018105 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 4.5 GO:0035556 intracellular signal transduction(GO:0035556)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
4.0 32.0 GO:0009538 photosystem I reaction center(GO:0009538)
3.3 29.4 GO:0009522 photosystem I(GO:0009522)
0.9 2.8 GO:0032432 actin filament bundle(GO:0032432)
0.9 22.5 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.8 12.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.8 2.3 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.8 3.8 GO:0009897 external side of plasma membrane(GO:0009897)
0.7 4.8 GO:0030892 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.5 8.6 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.4 1.1 GO:0009501 amyloplast(GO:0009501)
0.4 4.9 GO:0000124 SAGA complex(GO:0000124)
0.3 5.7 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.3 2.6 GO:0031209 SCAR complex(GO:0031209)
0.2 35.1 GO:0009505 plant-type cell wall(GO:0009505)
0.1 0.6 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.4 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.1 31.7 GO:0042651 photosynthetic membrane(GO:0034357) thylakoid membrane(GO:0042651)
0.1 1.6 GO:0010287 plastoglobule(GO:0010287)
0.1 26.4 GO:0048046 apoplast(GO:0048046)
0.1 11.9 GO:0009579 thylakoid(GO:0009579)
0.1 3.2 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.1 0.7 GO:0010369 chromocenter(GO:0010369)
0.0 117.0 GO:0005576 extracellular region(GO:0005576)
0.0 12.5 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.2 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 2.3 GO:0005875 microtubule associated complex(GO:0005875)
0.0 3.1 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 10.0 GO:0009941 chloroplast envelope(GO:0009941)
0.0 1.3 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.7 GO:0030863 cortical cytoskeleton(GO:0030863)
0.0 2.7 GO:0031982 vesicle(GO:0031982)
0.0 4.1 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 3.4 GO:0005802 trans-Golgi network(GO:0005802)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
5.3 21.3 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
3.4 16.8 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
1.6 4.7 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
1.4 12.4 GO:0009922 fatty acid elongase activity(GO:0009922)
1.3 5.1 GO:0004556 alpha-amylase activity(GO:0004556)
1.2 4.6 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
1.1 5.7 GO:0043682 copper-transporting ATPase activity(GO:0043682)
1.1 3.4 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134) heteropolysaccharide binding(GO:0010297)
1.1 3.3 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
1.1 3.2 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
1.1 4.3 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
1.0 4.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
1.0 32.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
1.0 3.8 GO:0015245 fatty acid transporter activity(GO:0015245)
0.9 6.8 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.8 1.7 GO:0052736 beta-glucanase activity(GO:0052736)
0.8 6.3 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.8 7.8 GO:0016872 intramolecular lyase activity(GO:0016872)
0.8 19.7 GO:0016168 chlorophyll binding(GO:0016168)
0.8 12.1 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.7 19.4 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.7 5.7 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.7 5.7 GO:0008083 growth factor activity(GO:0008083)
0.7 3.4 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.6 4.1 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.6 6.1 GO:0016160 amylase activity(GO:0016160) beta-amylase activity(GO:0016161)
0.5 15.9 GO:0008266 poly(U) RNA binding(GO:0008266)
0.5 5.8 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.5 5.9 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.5 2.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.4 3.1 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.4 2.5 GO:0004567 beta-mannosidase activity(GO:0004567)
0.4 5.4 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.4 4.7 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.4 8.0 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.4 10.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.4 12.5 GO:0016597 amino acid binding(GO:0016597)
0.3 6.6 GO:0005199 structural constituent of cell wall(GO:0005199)
0.3 3.3 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.3 5.5 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.3 2.7 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.3 3.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.3 2.8 GO:0004161 dimethylallyltranstransferase activity(GO:0004161)
0.3 3.1 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.2 1.7 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.2 10.9 GO:0003993 acid phosphatase activity(GO:0003993)
0.2 0.8 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.2 4.6 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 2.4 GO:0008061 chitin binding(GO:0008061)
0.2 2.3 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.2 1.6 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.2 0.7 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.2 2.1 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.2 4.1 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.2 3.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 3.3 GO:0030276 clathrin binding(GO:0030276)
0.1 0.8 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.1 6.5 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295) purine ribonucleotide transmembrane transporter activity(GO:0005346)
0.1 6.8 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 2.1 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 7.8 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 5.0 GO:0003727 single-stranded RNA binding(GO:0003727)
0.1 2.5 GO:0015211 purine nucleoside transmembrane transporter activity(GO:0015211)
0.1 5.8 GO:0016831 carboxy-lyase activity(GO:0016831)
0.1 6.6 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 6.9 GO:0003777 microtubule motor activity(GO:0003777)
0.1 4.2 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 3.6 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 0.5 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 2.0 GO:0008810 cellulase activity(GO:0008810)
0.1 0.8 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.9 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.1 0.8 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.7 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 13.1 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.5 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 5.4 GO:0015297 antiporter activity(GO:0015297)
0.0 10.8 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 3.3 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 1.8 GO:0051082 unfolded protein binding(GO:0051082)
0.0 20.3 GO:0003729 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 1.3 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 2.5 GO:0051015 actin filament binding(GO:0051015)
0.0 2.8 GO:0003682 chromatin binding(GO:0003682)
0.0 0.9 GO:0003724 RNA helicase activity(GO:0003724)
0.0 6.5 GO:0020037 heme binding(GO:0020037)
0.0 8.7 GO:0008270 zinc ion binding(GO:0008270)
0.0 7.9 GO:0005524 ATP binding(GO:0005524)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.6 PID S1P S1P1 PATHWAY S1P1 pathway
0.0 0.2 PID ATM PATHWAY ATM pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 4.8 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.5 4.6 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.5 4.1 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.4 8.3 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.2 1.6 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.0 0.2 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.2 REACTOME METABOLISM OF CARBOHYDRATES Genes involved in Metabolism of carbohydrates