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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G76880

Z-value: 0.27

Transcription factors associated with AT1G76880

Gene Symbol Gene ID Gene Info
AT1G76880
AT1G76880 Duplicated homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G76880arTal_v1_Chr1_+_28865314_28865314-0.261.9e-01Click!

Activity profile of AT1G76880 motif

Sorted Z-values of AT1G76880 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_11532199 1.08 AT1G32060.1
PRK
phosphoribulokinase
Chr2_+_9844134 1.06 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
Chr2_+_8940833 0.99 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr4_+_17243583 0.86 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr3_+_2563803 0.77 AT3G08030.1
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr1_+_27452748 0.77 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr3_+_2564153 0.77 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr1_+_11396402 0.75 AT1G31800.1
CYP97A3
cytochrome P450, family 97, subfamily A, polypeptide 3
Chr5_+_13830429 0.73 AT5G35630.1
GS2
glutamine synthetase 2
Chr5_+_13831020 0.72 AT5G35630.2
GS2
glutamine synthetase 2
Chr5_+_13830746 0.72 AT5G35630.3
GS2
glutamine synthetase 2
Chr1_+_9534488 0.72 AT1G27460.2
AT1G27460.1
AT1G27460.3
NPGR1
no pollen germination related 1
Chr2_+_14849357 0.68 AT2G35260.1
AT2G35260
CAAX protease self-immunity protein
Chr5_-_14199431 0.68 AT5G36120.1
CCB3
cofactor assembly, complex C (B6F)
Chr3_-_19467455 0.67 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr5_+_6387341 0.67 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr1_-_11872926 0.65 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
Chr2_+_11856571 0.65 AT2G27820.1
PD1
prephenate dehydratase 1
Chr3_+_5934033 0.63 AT3G17350.1
AT3G17350.2
AT3G17350
wall-associated receptor kinase carboxy-terminal protein
Chr3_-_427095 0.63 AT3G02250.1
AT3G02250
O-fucosyltransferase family protein
Chr4_+_160643 0.62 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr2_+_9034056 0.60 AT2G21050.1
LAX2
like AUXIN RESISTANT 2
Chr2_+_19469571 0.60 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_24167996 0.59 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
Chr3_-_6980523 0.57 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr2_-_13850998 0.56 AT2G32640.1
AT2G32640.2
AT2G32640
Lycopene beta/epsilon cyclase protein
Chr1_-_10326848 0.53 AT1G29530.1
AT1G29530
hypothetical protein
Chr2_+_9259511 0.52 AT2G21650.1
MEE3
Homeodomain-like superfamily protein
Chr4_+_1415953 0.51 AT4G03210.2
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr2_+_11041331 0.51 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_+_6387735 0.49 AT5G19090.5
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr3_-_821652 0.48 AT3G03450.1
RGL2
RGA-like 2
Chr5_+_24168245 0.47 AT5G60020.3
LAC17
laccase 17
Chr4_-_14453966 0.47 AT4G29360.2
AT4G29360.1
AT4G29360
O-Glycosyl hydrolases family 17 protein
Chr5_+_6122725 0.47 AT5G18460.1
AT5G18460
carboxyl-terminal peptidase (DUF239)
Chr4_+_1415617 0.46 AT4G03210.1
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr1_-_16399880 0.45 AT1G43560.1
ty2
thioredoxin Y2
Chr1_-_3931701 0.43 AT1G11670.1
AT1G11670
MATE efflux family protein
Chr5_-_13487594 0.43 AT5G35220.1
EGY1
Peptidase M50 family protein
Chr2_-_466955 0.43 AT2G01990.2
AT2G01990
XRI1-like protein
Chr1_+_29782273 0.43 AT1G79170.1
AT1G79170
transmembrane protein
Chr2_-_466724 0.42 AT2G01990.1
AT2G01990
XRI1-like protein
Chr1_+_20048434 0.42 AT1G53700.1
WAG1
WAG 1
Chr1_+_14003819 0.42 AT1G36940.1
AT1G36940.2
AT1G36940
myotubularin-like protein
Chr4_+_9854322 0.38 AT4G17700.1
AT4G17700
hypothetical protein
Chr3_-_1858946 0.37 AT3G06140.1
LUL4
RING/U-box superfamily protein
Chr1_-_23286797 0.37 AT1G62870.1
AT1G62870
hypothetical protein
Chr4_+_17028586 0.36 AT4G35970.1
AT4G35970.2
APX5
ascorbate peroxidase 5
Chr2_+_15860627 0.36 AT2G37880.1
AT2G37880
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr1_-_9806896 0.35 AT1G28110.1
AT1G28110.2
SCPL45
serine carboxypeptidase-like 45
Chr1_-_17368703 0.33 AT1G47370.1
AT1G47370
Toll-Interleukin-Resistance (TIR) domain family protein
Chr3_+_3481020 0.33 AT3G11120.1
AT3G11120
Ribosomal protein L41 family
Chr2_+_1238630 0.33 AT2G03955.1
AT2G03955
Cysteine-rich protein
Chr1_+_15976805 0.33 AT1G42550.1
PMI1
plastid movement impaired1
Chr5_+_6947789 0.32 AT5G20540.1
BRXL4
BREVIS RADIX-like 4
Chr4_-_776131 0.31 AT4G01800.1
AT4G01800.2
AGY1
Albino or Glassy Yellow 1
Chr3_-_5605765 0.31 AT3G16490.1
IQD26
IQ-domain 26
Chr4_-_6796398 0.31 AT4G11140.1
CRF1
cytokinin response factor 1
Chr5_+_1221448 0.30 AT5G04360.1
AT5G04360.2
LDA
limit dextrinase
Chr5_-_4301780 0.30 AT5G13410.2
AT5G13410.3
AT5G13410.1
AT5G13410
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Chr1_-_28683741 0.30 AT1G76440.2
AT1G76440.3
AT1G76440.1
AT1G76440
HSP20-like chaperones superfamily protein
Chr4_-_13910995 0.30 AT4G27950.1
CRF4
cytokinin response factor 4
Chr4_-_776439 0.30 AT4G01800.3
AGY1
Albino or Glassy Yellow 1
Chr3_-_9805781 0.29 AT3G26690.2
AT3G26690.1
NUDX13
nudix hydrolase homolog 13
Chr5_+_26660311 0.29 AT5G66770.1
AT5G66770
GRAS family transcription factor
Chr4_-_17727909 0.28 AT4G37740.1
GRF2
growth-regulating factor 2
Chr5_+_5084524 0.28 AT5G15630.1
AT5G15630.2
AT5G15630.3
AT5G15630.4
AT5G15630.5
IRX6
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Chr3_+_6187267 0.28 AT3G18070.3
AT3G18070.1
AT3G18070.4
AT3G18070.5
AT3G18070.2
BGLU43
beta glucosidase 43
Chr5_-_5961113 0.28 AT5G18000.2
VDD
VERDANDI
Chr1_-_4165928 0.27 AT1G12260.1
AT1G12260.2
NAC007
NAC 007
Chr4_-_16063070 0.27 AT4G33330.2
AT4G33330.1
AT4G33330.5
AT4G33330.3
AT4G33330.4
PGSIP3
plant glycogenin-like starch initiation protein 3
Chr2_-_14644355 0.27 AT2G34710.1
PHB
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Chr5_-_5961642 0.27 AT5G18000.1
VDD
VERDANDI
Chr5_-_18601661 0.27 AT5G45850.1
AT5G45850
hypothetical protein (DUF688)
Chr4_-_17393479 0.27 AT4G36910.1
LEJ2
Cystathionine beta-synthase (CBS) family protein
Chr1_-_24653998 0.26 AT1G66190.1
AT1G66190
hypothetical protein
Chr1_+_29771218 0.26 AT1G79130.1
AT1G79130
SAUR-like auxin-responsive protein family
Chr5_+_9656949 0.26 AT5G27360.3
AT5G27360.2
AT5G27360.1
AT5G27360.4
SFP2
Major facilitator superfamily protein
Chr3_-_18952109 0.26 AT3G51030.1
TRX1
thioredoxin H-type 1
Chr5_+_20458939 0.25 AT5G50280.1
EMB1006
Pentatricopeptide repeat (PPR) superfamily protein
Chr5_-_7934547 0.25 AT5G23530.1
CXE18
carboxyesterase 18
Chr3_-_1884970 0.25 AT3G06220.1
AT3G06220
AP2/B3-like transcriptional factor family protein
Chr1_-_27582685 0.25 AT1G73360.1
HDG11
homeodomain GLABROUS 11
Chr1_-_26663337 0.25 AT1G70710.1
GH9B1
glycosyl hydrolase 9B1
Chr2_-_15589369 0.24 AT2G37090.1
IRX9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr5_+_23144947 0.24 AT5G57130.1
AT5G57130
Clp amino terminal domain-containing protein
Chr4_-_10940644 0.23 AT4G20250.1
AT4G20250
hypothetical protein
Chr2_-_11448914 0.23 AT2G26840.1
AT2G26840.2
AT2G26840
MutS2
Chr3_+_10447845 0.22 AT3G28070.1
AT3G28070.4
AT3G28070.3
AT3G28070.2
AT3G28070.5
UMAMIT46
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_4583315 0.22 AT3G13898.1
AT3G13898
EPIDERMAL PATTERNING FACTOR-like protein
Chr2_-_986662 0.22 AT2G03250.1
AT2G03250.2
AT2G03250
EXS (ERD1/XPR1/SYG1) family protein
Chr1_-_15878184 0.22 AT1G42420.1
AT1G42420

Chr3_-_7784469 0.22 AT3G22100.1
AT3G22100
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_26253408 0.22 AT5G65670.1
IAA9
indole-3-acetic acid inducible 9
Chr5_+_26253947 0.21 AT5G65670.2
IAA9
indole-3-acetic acid inducible 9
Chr1_+_25957823 0.21 AT1G69040.1
ACR4
ACT domain repeat 4
Chr5_-_23868083 0.21 AT5G59120.1
SBT4.13
subtilase 4.13
Chr1_+_25957567 0.21 AT1G69040.2
ACR4
ACT domain repeat 4
Chr2_+_11871378 0.21 AT2G27880.1
AGO5
Argonaute family protein
Chr1_-_4268914 0.21 AT1G12520.3
AT1G12520.2
AT1G12520.1
CCS
copper chaperone for SOD1
Chr1_+_29373803 0.21 AT1G78090.1
AT1G78090.2
TPPB
trehalose-6-phosphate phosphatase
Chr4_-_8711526 0.21 AT4G15250.1
BBX9
B-box type zinc finger protein with CCT domain-containing protein
Chr1_+_30085750 0.20 AT1G79990.2
AT1G79990.1
AT1G79990
coatomer subunit beta-2
Chr2_-_14479962 0.20 AT2G34310.6
AT2G34310.1
AT2G34310.2
AT2G34310.5
AT2G34310.3
AT2G34310.4
AT2G34310.7
AT2G34310
hypothetical protein
Chr3_+_6188132 0.20 AT3G18070.7
AT3G18070.6
BGLU43
beta glucosidase 43
Chr5_+_14767426 0.20 AT5G37300.3
AT5G37300.4
AT5G37300.2
AT5G37300.1
WSD1
O-acyltransferase (WSD1-like) family protein
Chr3_-_18786686 0.20 AT3G50620.3
AT3G50620.2
AT3G50620
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_9691628 0.20 AT1G27820.1
AT1G27820
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr1_+_5393407 0.19 AT1G15680.1
AT1G15680
F-box family protein
Chr3_-_18786952 0.19 AT3G50620.1
AT3G50620
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_28937319 0.18 AT1G76994.1
AT1G76994
hypothetical protein
Chr1_-_8382290 0.18 AT1G23700.1
AT1G23700
Protein kinase superfamily protein
Chr1_-_20707071 0.18 AT1G55450.1
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_20706893 0.18 AT1G55450.2
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_12571538 0.18 AT4G24240.1
WRKY7
WRKY DNA-binding protein 7
Chr4_+_12571735 0.18 AT4G24240.2
WRKY7
WRKY DNA-binding protein 7
Chr5_-_7553504 0.18 AT5G22730.2
AT5G22730.1
AT5G22730.3
AT5G22730
F-box/RNI-like/FBD-like domains-containing protein
Chr2_-_17455372 0.18 AT2G41830.2
AT2G41830
Uncharacterized protein
Chr1_-_8381965 0.17 AT1G23700.3
AT1G23700.2
AT1G23700
Protein kinase superfamily protein
Chr3_-_17541283 0.17 AT3G47600.2
AT3G47600.1
MYB94
myb domain protein 94
Chr3_-_10030087 0.17 AT3G27180.1
AT3G27180
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_9658422 0.17 AT5G27360.5
SFP2
Major facilitator superfamily protein
Chr1_-_1692179 0.17 AT1G05650.1
AT1G05650
Pectin lyase-like superfamily protein
Chr4_+_9345150 0.17 AT4G16590.1
CSLA01
cellulose synthase-like A01
Chr2_-_17457130 0.17 AT2G41830.1
AT2G41830
Uncharacterized protein
Chr1_-_13164512 0.16 AT1G35630.1
AT1G35630
Protease-associated (PA) RING/U-box zinc finger family protein
Chr5_-_18301104 0.16 AT5G45220.2
AT5G45220.1
AT5G45220
Disease resistance protein (TIR-NBS-LRR class) family
Chr2_-_4067263 0.16 AT2G10530.1
AT2G10530

Chr5_-_4734712 0.16 AT5G14690.2
AT5G14690
transmembrane protein
Chr2_+_7401117 0.16 AT2G17033.2
AT2G17033.1
AT2G17033.3
AT2G17033.4
AT2G17033
pentatricopeptide (PPR) repeat-containing protein
Chr4_+_8949460 0.16 AT4G15720.1
AT4G15720
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_19504534 0.16 AT5G48110.1
AT5G48110
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Chr1_-_16446885 0.15 AT1G43650.1
AT1G43650.2
UMAMIT22
nodulin MtN21 /EamA-like transporter family protein
Chr4_+_12629951 0.15 AT4G24430.1
AT4G24430
Rhamnogalacturonate lyase family protein
Chr5_+_6249727 0.15 AT5G18740.1
AT5G18740
hypothetical protein (DUF3444)
Chr3_+_8068418 0.15 AT3G22810.1
AT3G22810.2
AT3G22810
auxin canalization protein (DUF828)
Chr3_+_22190782 0.15 AT3G60090.1
AT3G60090
VQ motif-containing protein
Chr1_-_18076405 0.15 AT1G48870.2
AT1G48870
Transducin/WD40 repeat-like superfamily protein
Chr4_-_14883583 0.15 AT4G30440.1
GAE1
UDP-D-glucuronate 4-epimerase 1
Chr5_-_23263457 0.15 AT5G57400.1
AT5G57400.2
AT5G57400
transmembrane protein
Chr4_+_12630442 0.15 AT4G24430.2
AT4G24430
Rhamnogalacturonate lyase family protein
Chr5_-_907440 0.15 AT5G03580.1
AT5G03580
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_-_19646840 0.15 AT5G48485.1
DIR1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_18075252 0.15 AT1G48870.1
AT1G48870
Transducin/WD40 repeat-like superfamily protein
Chr1_+_27076020 0.14 AT1G71930.1
VND7
vascular related NAC-domain protein 7
Chr5_-_4736645 0.14 AT5G14690.1
AT5G14690
transmembrane protein
Chr5_+_13726743 0.14 AT5G35550.2
AT5G35550.1
TT2
Duplicated homeodomain-like superfamily protein
Chr5_+_14921986 0.14 AT5G37560.1
AT5G37560
RING/U-box superfamily protein
Chr5_-_18569843 0.14 AT5G45780.2
AT5G45780.1
AT5G45780
Leucine-rich repeat protein kinase family protein
Chr4_+_14368877 0.14 AT4G29140.1
ADS1
MATE efflux family protein
Chr1_+_20143144 0.14 AT1G53940.1
AT1G53940.2
GLIP2
GDSL-motif lipase 2
Chr1_-_18074480 0.14 AT1G48870.3
AT1G48870
Transducin/WD40 repeat-like superfamily protein
Chr1_-_19288385 0.14 AT1G51910.1
AT1G51910
Leucine-rich repeat protein kinase family protein
Chr4_+_9311355 0.14 AT4G16530.1
AT4G16530
hypothetical protein
Chr3_-_6268586 0.13 AT3G18282.1
AT3G18282
hypothetical protein
Chr3_+_9301747 0.13 AT3G25590.1
AT3G25590
micronuclear linker histone polyprotein-like protein
Chr1_+_9937001 0.13 AT1G28335.1
LCR31
low-molecular-weight cysteine-rich 31
Chr1_+_27074702 0.13 AT1G71930.2
VND7
vascular related NAC-domain protein 7
Chr5_+_16636029 0.13 AT5G41600.1
BTI3
VIRB2-interacting protein 3
Chr1_-_19414678 0.13 AT1G52150.2
AT1G52150.3
AT1G52150.1
ATHB-15
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Chr3_+_15052579 0.13 AT3G43020.1
AT3G43020

Chr1_+_10571310 0.12 AT1G30100.1
NCED5
nine-cis-epoxycarotenoid dioxygenase 5
Chr5_-_6516697 0.12 AT5G19340.1
AT5G19340
hypothetical protein
Chr4_-_12533924 0.12 AT4G24140.1
AT4G24140
alpha/beta-Hydrolases superfamily protein
Chr3_-_12792017 0.12 AT3G31420.1
AT3G31420

Chr1_-_11079240 0.12 AT1G31050.8
AT1G31050.7
AT1G31050.4
AT1G31050.6
AT1G31050.5
AT1G31050.3
AT1G31050.2
AT1G31050.1
AT1G31050
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_6124897 0.12 AT4G09690.1
AT4G09690
Cysteine/Histidine-rich C1 domain family protein
Chr3_-_2578276 0.12 AT3G08500.1
MYB83
myb domain protein 83
Chr5_-_23009709 0.12 AT5G56880.1
AT5G56880
hypothetical protein
Chr1_-_13120439 0.12 AT1G35570.1
AT1G35570

Chr5_+_14204409 0.12 AT5G36125.1
AT5G36125

Chr2_+_6298679 0.11 AT2G14710.1
AT2G14710
F-box family protein
Chr3_-_21862807 0.11 AT3G59130.1
AT3G59130
Cysteine/Histidine-rich C1 domain family protein
Chr5_-_24096532 0.11 AT5G59800.1
MBD7
methyl-CPG-binding domain 7
Chr2_+_19529743 0.11 AT2G47610.1
AT2G47610
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Chr4_+_17844361 0.11 AT4G37950.1
AT4G37950
Rhamnogalacturonate lyase family protein
Chr4_+_17844656 0.11 AT4G37950.2
AT4G37950
Rhamnogalacturonate lyase family protein
Chr5_-_9941447 0.10 AT5G27910.1
NF-YC8
nuclear factor Y, subunit C8
Chr1_+_18342451 0.10 AT1G49560.1
AT1G49560.2
AT1G49560
Homeodomain-like superfamily protein
Chr3_-_4799612 0.10 AT3G14370.1
WAG2
Protein kinase superfamily protein
Chr2_+_717256 0.10 AT2G02620.1
AT2G02620
Cysteine/Histidine-rich C1 domain family protein
Chr2_+_13168533 0.09 AT2G30940.3
AT2G30940.2
AT2G30940.1
AT2G30940
Protein kinase superfamily protein
Chr3_+_9922719 0.09 AT3G26922.3
AT3G26922.2
AT3G26922.1
AT3G26922.4
AT3G26922
F-box/RNI-like superfamily protein
Chr5_-_25136065 0.09 AT5G62610.2
AT5G62610
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_9964090 0.09 AT4G17920.1
AT4G17920
RING/U-box superfamily protein
Chr4_-_3958339 0.09 AT4G06702.1
AT4G06702

Chr2_+_17501629 0.09 AT2G41930.1
AT2G41930
Protein kinase superfamily protein
Chr5_-_25134906 0.09 AT5G62610.1
AT5G62610
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_1195969 0.09 AT5G04290.2
AT5G04290.1
KTF1
kow domain-containing transcription factor 1
Chr3_+_9922918 0.09 AT3G26922.5
AT3G26922
F-box/RNI-like superfamily protein
Chr2_-_14592140 0.09 AT2G34650.1
PID
Protein kinase superfamily protein
Chr5_+_8784747 0.09 AT5G25310.1
AT5G25310
Exostosin family protein
Chr1_+_24271276 0.08 AT1G65342.1
AT1G65342
transmembrane protein
Chr3_+_8069490 0.08 AT3G22810.3
AT3G22810
auxin canalization protein (DUF828)
Chr5_+_16171374 0.08 AT5G40410.1
AT5G40410
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_7137828 0.08 AT1G20610.1
CYCB2%3B3
Cyclin B2;3
Chr1_+_4515464 0.08 AT1G13220.3
AT1G13220.1
AT1G13220.2
LINC2
nuclear matrix constituent protein-like protein
Chr5_+_4040937 0.08 AT5G12450.1
AT5G12450
FBD-like domain family protein
Chr1_+_4604688 0.08 AT1G13420.1
ST4B
sulfotransferase 4B
Chr2_+_16200944 0.08 AT2G38760.1
ANNAT3
annexin 3

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G76880

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.2 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.1 0.4 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 0.6 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.1 0.4 GO:0043157 response to cation stress(GO:0043157)
0.1 0.7 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 1.1 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.1 0.8 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 0.7 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.9 GO:0007143 female meiotic division(GO:0007143)
0.1 0.7 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.1 0.3 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.1 0.2 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.0 GO:0006949 syncytium formation(GO:0006949)
0.0 0.2 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.3 GO:0090059 protoxylem development(GO:0090059)
0.0 0.2 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.6 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.0 0.5 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.5 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.3 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.0 0.4 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.2 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.0 0.3 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.4 GO:0006521 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.0 0.1 GO:0097298 regulation of nucleus size(GO:0097298)
0.0 0.9 GO:0048825 cotyledon development(GO:0048825)
0.0 0.2 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.0 0.1 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.6 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.9 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.1 GO:0051570 regulation of histone H3-K9 methylation(GO:0051570)
0.0 0.8 GO:0019395 fatty acid oxidation(GO:0019395)
0.0 0.1 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.3 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.4 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.3 GO:0008285 negative regulation of cell proliferation(GO:0008285)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0030126 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.0 1.1 GO:0010319 stromule(GO:0010319)
0.0 0.1 GO:0032044 DSIF complex(GO:0032044)
0.0 0.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.1 GO:0010369 chromocenter(GO:0010369)
0.0 0.1 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.2 1.4 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.2 0.8 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.2 0.6 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.2 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.6 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.7 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.6 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.3 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 1.1 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.4 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.4 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.2 GO:0016531 copper chaperone activity(GO:0016531)
0.0 1.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.5 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.5 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.1 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.1 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.1 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.2 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.6 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.1 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.4 GO:0004222 metalloendopeptidase activity(GO:0004222)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism