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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G76420

Z-value: 3.69

Transcription factors associated with AT1G76420

Gene Symbol Gene ID Gene Info
AT1G76420 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
CUC3arTal_v1_Chr1_-_28674045_286740450.301.2e-01Click!

Activity profile of AT1G76420 motif

Sorted Z-values of AT1G76420 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_15983199 28.17 AT3G44300.1
nitrilase 2
Chr1_-_23238644 24.53 AT1G62760.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_30150897 24.14 AT1G80160.3
AT1G80160.1
AT1G80160.2
Lactoylglutathione lyase / glyoxalase I family protein
Chr3_+_22935510 23.14 AT3G61930.1
hypothetical protein
Chr2_-_18781973 22.16 AT2G45570.1
cytochrome P450, family 76, subfamily C, polypeptide 2
Chr3_-_162905 21.64 AT3G01420.1
Peroxidase superfamily protein
Chr3_-_3197457 21.50 AT3G10320.1
Glycosyltransferase family 61 protein
Chr1_+_25765718 21.28 AT1G68620.1
alpha/beta-Hydrolases superfamily protein
Chr4_+_8908763 21.23 AT4G15610.1
AT4G15610.2
Uncharacterized protein family (UPF0497)
Chr5_+_16290386 20.62 AT5G40690.1
histone-lysine N-methyltransferase trithorax-like protein
Chr1_-_9131779 20.59 AT1G26390.1
FAD-binding Berberine family protein
Chr3_+_5234457 20.38 AT3G15500.1
NAC domain containing protein 3
Chr4_+_15828228 19.94 AT4G32810.1
AT4G32810.2
carotenoid cleavage dioxygenase 8
Chr1_-_1559917 19.69 AT1G05340.1
cysteine-rich TM module stress tolerance protein
Chr4_+_7156150 19.47 AT4G11910.1
STAY-GREEN-like protein
Chr3_+_9208861 19.46 AT3G25290.1
AT3G25290.2
Auxin-responsive family protein
Chr1_+_10892445 19.27 AT1G30700.1
FAD-binding Berberine family protein
Chr5_-_17166032 18.52 AT5G42800.1
dihydroflavonol 4-reductase
Chr2_+_7845923 18.19 AT2G18050.2
AT2G18050.1
histone H1-3
Chr5_+_5658416 18.07 AT5G17220.1
glutathione S-transferase phi 12
Chr1_-_460696 17.95 AT1G02310.1
AT1G02310.2
Glycosyl hydrolase superfamily protein
Chr5_-_216773 17.80 AT5G01550.1
lectin receptor kinase a4.1
Chr1_-_10356482 17.78 AT1G29640.1
senescence regulator (Protein of unknown function, DUF584)
Chr5_-_4183354 17.56 AT5G13170.1
senescence-associated gene 29
Chr3_-_2699257 17.56 AT3G08860.2
PYRIMIDINE 4
Chr1_+_27538190 17.51 AT1G73220.1
organic cation/carnitine transporter1
Chr4_-_12018492 17.27 AT4G22920.1
non-yellowing 1
Chr4_+_12461907 17.22 AT4G24000.1
cellulose synthase like G2
Chr4_-_12018643 17.21 AT4G22920.2
non-yellowing 1
Chr3_-_2699420 17.12 AT3G08860.1
PYRIMIDINE 4
Chr4_-_12853845 17.09 AT4G25000.1
alpha-amylase-like protein
Chr5_-_8659352 16.97 AT5G25110.1
CBL-interacting protein kinase 25
Chr2_-_18646606 16.94 AT2G45220.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_18077517 16.91 AT2G43570.1
chitinase
Chr1_-_25662276 16.83 AT1G68450.1
VQ motif-containing protein
Chr5_-_21938396 16.59 AT5G54060.1
UDP-glucose:flavonoid 3-o-glucosyltransferase
Chr3_-_21189859 16.57 AT3G57260.1
AT3G57260.2
beta-1,3-glucanase 2
Chr2_+_6244772 16.56 AT2G14620.2
AT2G14620.3
AT2G14620.1
xyloglucan endotransglucosylase/hydrolase 10
Chr2_+_15830870 16.47 AT2G37750.1
hypothetical protein
Chr3_-_1063103 16.39 AT3G04070.2
AT3G04070.1
NAC domain containing protein 47
Chr2_-_14541617 16.37 AT2G34500.1
cytochrome P450, family 710, subfamily A, polypeptide 1
Chr4_-_9368852 16.30 AT4G16640.1
Matrixin family protein
Chr5_-_26857086 16.26 AT5G67310.1
cytochrome P450, family 81, subfamily G, polypeptide 1
Chr5_-_6042938 16.19 AT5G18270.2
AT5G18270.1
NAC domain containing protein 87
Chr3_+_10520443 16.18 AT3G28210.1
AT3G28210.2
zinc finger (AN1-like) family protein
Chr3_-_4657723 16.09 AT3G14060.1
hypothetical protein
Chr3_-_19643276 15.88 AT3G52970.1
AT3G52970.2
cytochrome P450, family 76, subfamily G, polypeptide 1
Chr5_-_4151201 15.85 AT5G13080.1
WRKY DNA-binding protein 75
Chr3_-_7999552 15.81 AT3G22560.1
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr4_-_15991536 15.80 AT4G33150.1
AT4G33150.2
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr1_-_513698 15.76 AT1G02470.2
AT1G02470.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_+_21652988 15.74 AT1G58340.1
MATE efflux family protein
Chr2_+_18558885 15.64 AT2G44990.2
AT2G44990.3
AT2G44990.1
carotenoid cleavage dioxygenase 7
Chr5_+_20455317 15.60 AT5G50260.1
Cysteine proteinases superfamily protein
Chr4_+_6491017 15.50 AT4G10500.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_4633299 15.28 AT1G13520.1
hypothetical protein (DUF1262)
Chr2_-_19166949 15.16 AT2G46680.2
AT2G46680.1
homeobox 7
Chr1_+_5389952 15.04 AT1G15670.1
Galactose oxidase/kelch repeat superfamily protein
Chr4_-_16344818 14.85 AT4G34131.1
UDP-glucosyl transferase 73B3
Chr5_-_9000345 14.84 AT5G25820.1
Exostosin family protein
Chr1_-_27475962 14.82 AT1G73040.1
Mannose-binding lectin superfamily protein
Chr5_+_24958125 14.81 AT5G62150.1
peptidoglycan-binding LysM domain-containing protein
Chr4_+_12463312 14.81 AT4G24000.2
cellulose synthase like G2
Chr5_+_25679425 14.65 AT5G64190.2
AT5G64190.1
neuronal PAS domain protein
Chr4_+_10398857 14.64 AT4G18980.1
AtS40-3
Chr3_-_23150606 14.57 AT3G62590.1
alpha/beta-Hydrolases superfamily protein
Chr1_+_5822309 14.57 AT1G17030.1
hypothetical protein
Chr1_+_26122080 14.57 AT1G69490.1
NAC-like, activated by AP3/PI
Chr4_-_17494279 14.56 AT4G37150.1
methyl esterase 9
Chr3_-_19577141 14.51 AT3G52820.1
purple acid phosphatase 22
Chr2_-_16014991 14.45 AT2G38240.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_23072222 14.41 AT1G62370.1
RING/U-box superfamily protein
Chr4_+_18409846 14.13 AT4G39670.1
Glycolipid transfer protein (GLTP) family protein
Chr1_-_27834207 14.13 AT1G74010.1
Calcium-dependent phosphotriesterase superfamily protein
Chr4_-_15988441 14.13 AT4G33150.3
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr1_-_27837443 14.12 AT1G74020.1
strictosidine synthase 2
Chr1_-_21235292 13.96 AT1G56650.1
production of anthocyanin pigment 1
Chr4_-_15991202 13.84 AT4G33150.4
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr2_+_18577500 13.83 AT2G45040.1
Matrixin family protein
Chr2_+_12322386 13.79 AT2G28710.1
C2H2-type zinc finger family protein
Chr2_+_12871984 13.78 AT2G30140.1
AT2G30140.2
UDP-Glycosyltransferase superfamily protein
Chr5_+_5995479 13.78 AT5G18130.2
transmembrane protein
Chr1_+_29298243 13.74 AT1G77920.1
bZIP transcription factor family protein
Chr5_+_5995323 13.70 AT5G18130.1
transmembrane protein
Chr1_-_9143336 13.62 AT1G26420.1
FAD-binding Berberine family protein
Chr4_-_2234689 13.56 AT4G04490.1
cysteine-rich RLK (RECEPTOR-like protein kinase) 36
Chr1_-_9128568 13.41 AT1G26380.1
FAD-binding Berberine family protein
Chr4_+_694582 13.25 AT4G01610.1
AT4G01610.2
Cysteine proteinases superfamily protein
Chr3_+_18207651 13.23 AT3G49120.1
peroxidase CB
Chr5_+_523257 13.22 AT5G02420.1
cyclin-dependent kinase inhibitor SMR3-like protein
Chr5_-_5424615 13.21 AT5G16570.2
AT5G16570.1
glutamine synthetase 1;4
Chr1_+_2867203 13.15 AT1G08920.1
AT1G08920.2
AT1G08920.3
ERD (early response to dehydration) six-like 1
Chr3_+_1635194 13.07 AT3G05630.1
phospholipase D P2
Chr2_+_14180978 13.04 AT2G33480.1
AT2G33480.3
NAC domain containing protein 41
Chr3_-_11194897 13.03 AT3G29250.2
AT3G29250.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_23168767 12.90 AT1G62570.1
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr5_+_2204206 12.67 AT5G07100.5
AT5G07100.3
AT5G07100.4
AT5G07100.2
AT5G07100.1
WRKY DNA-binding protein 26
Chr2_-_275002 12.67 AT2G01610.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_+_1175581 12.66 AT2G03850.1
Late embryogenesis abundant protein (LEA) family protein
Chr1_-_12398418 12.62 AT1G34060.1
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr3_-_10790553 12.57 AT3G28740.1
Cytochrome P450 superfamily protein
Chr1_+_7434235 12.52 AT1G21240.1
AT1G21240.2
wall associated kinase 3
Chr2_+_14783254 12.51 AT2G35070.1
AT2G35070.2
transmembrane protein
Chr5_+_3839316 12.49 AT5G11920.3
AT5G11920.1
AT5G11920.2
6-&1-fructan exohydrolase
Chr2_+_14181186 12.49 AT2G33480.2
NAC domain containing protein 41
Chr5_-_25608987 12.48 AT5G63970.2
Copine (Calcium-dependent phospholipid-binding protein) family
Chr5_-_23281271 12.39 AT5G57480.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_+_11655562 12.38 AT4G21980.1
AT4G21980.2
Ubiquitin-like superfamily protein
Chr5_+_15501126 12.36 AT5G38710.1
AT5G38710.2
Methylenetetrahydrofolate reductase family protein
Chr1_+_8164959 12.34 AT1G23040.3
AT1G23040.2
hydroxyproline-rich glycoprotein family protein
Chr4_-_12345652 12.30 AT4G23700.2
cation/H+ exchanger 17
Chr4_+_994726 12.26 AT4G02280.1
sucrose synthase 3
Chr5_-_16021916 12.20 AT5G40010.1
AAA-ATPase 1
Chr5_-_25609306 12.17 AT5G63970.1
Copine (Calcium-dependent phospholipid-binding protein) family
Chr3_+_21380648 12.15 AT3G57680.1
AT3G57680.2
Peptidase S41 family protein
Chr4_-_15903523 12.11 AT4G32940.1
gamma vacuolar processing enzyme
Chr4_+_10875233 12.10 AT4G20110.2
AT4G20110.1
VACUOLAR SORTING RECEPTOR 7
Chr4_-_12346051 12.03 AT4G23700.1
cation/H+ exchanger 17
Chr3_+_4346330 12.01 AT3G13380.1
BRI1-like 3
Chr4_-_12242706 12.01 AT4G23450.4
AT4G23450.6
AT4G23450.2
AT4G23450.5
AT4G23450.3
AT4G23450.1
RING/U-box superfamily protein
Chr1_+_3288087 12.00 AT1G10070.3
AT1G10070.2
AT1G10070.1
branched-chain amino acid transaminase 2
Chr3_-_19699392 11.91 AT3G53150.1
UDP-glucosyl transferase 73D1
Chr1_-_12397986 11.90 AT1G34060.2
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr3_-_1956397 11.89 AT3G06420.1
Ubiquitin-like superfamily protein
Chr1_-_23019494 11.88 AT1G62300.1
WRKY family transcription factor
Chr3_+_17624340 11.88 AT3G47780.1
ABC2 homolog 6
Chr3_-_4474364 11.85 AT3G13672.2
AT3G13672.1
TRAF-like superfamily protein
Chr2_+_11263889 11.84 AT2G26480.1
UDP-glucosyl transferase 76D1
Chr4_+_14065992 11.82 AT4G28460.1
transmembrane protein
Chr5_+_2938193 11.73 AT5G09440.1
EXORDIUM like 4
Chr5_+_21910471 11.72 AT5G53970.1
Tyrosine transaminase family protein
Chr5_+_1153740 11.68 AT5G04200.1
metacaspase 9
Chr1_-_20849054 11.66 AT1G55760.1
BTB/POZ domain-containing protein
Chr1_-_659980 11.63 AT1G02920.1
glutathione S-transferase 7
Chr1_+_8164782 11.62 AT1G23040.1
hydroxyproline-rich glycoprotein family protein
Chr4_+_7148124 11.53 AT4G11890.3
AT4G11890.1
AT4G11890.4
Protein kinase superfamily protein
Chr5_+_4461554 11.53 AT5G13820.2
telomeric DNA binding protein 1
Chr3_+_25355 11.52 AT3G01080.2
AT3G01080.3
AT3G01080.1
WRKY DNA-binding protein 58
Chr2_+_6893949 11.49 AT2G15830.1
hypothetical protein
Chr1_+_9825169 11.47 AT1G28130.1
Auxin-responsive GH3 family protein
Chr4_+_7239200 11.47 AT4G12080.1
AT-hook motif nuclear-localized protein 1
Chr2_-_12905338 11.46 AT2G30250.1
WRKY DNA-binding protein 25
Chr5_+_8082650 11.44 AT5G23950.2
AT5G23950.1
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_-_4454703 11.33 AT5G13800.4
AT5G13800.3
AT5G13800.1
AT5G13800.2
pheophytinase
Chr2_-_18463533 11.26 AT2G44790.1
uclacyanin 2
Chr3_+_22716238 11.26 AT3G61390.1
AT3G61390.2
AT3G61390.3
AT3G61390.4
AT3G61390.5
RING/U-box superfamily protein
Chr2_-_16780368 11.26 AT2G40170.1
Stress induced protein
Chr5_+_206432 11.22 AT5G01520.2
AT5G01520.1
RING/U-box superfamily protein
Chr4_+_17444315 11.20 AT4G37010.1
centrin 2
Chr1_+_9825914 11.19 AT1G28130.2
Auxin-responsive GH3 family protein
Chr2_+_16997078 11.19 AT2G40740.3
AT2G40740.2
AT2G40740.1
WRKY DNA-binding protein 55
Chr1_-_1704838 11.18 AT1G05680.1
Uridine diphosphate glycosyltransferase 74E2
Chr3_-_21834514 11.18 AT3G59070.1
Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein
Chr1_-_16917053 11.18 AT1G44800.1
nodulin MtN21 /EamA-like transporter family protein
Chr2_-_13856297 11.16 AT2G32660.2
receptor like protein 22
Chr5_-_26096114 11.14 AT5G65300.1
hypothetical protein
Chr4_-_1046993 11.12 AT4G02380.2
AT4G02380.1
AT4G02380.3
senescence-associated gene 21
Chr3_-_2651101 11.10 AT3G08720.4
AT3G08720.3
AT3G08720.2
AT3G08720.1
serine/threonine protein kinase 2
Chr1_-_1257893 11.08 AT1G04580.1
aldehyde oxidase 4
Chr4_+_17444129 11.08 AT4G37010.2
centrin 2
Chr1_-_5129523 11.07 AT1G14870.2
PLANT CADMIUM RESISTANCE 2
Chr4_-_10765781 11.06 AT4G19810.1
AT4G19810.2
Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
Chr3_-_2498095 11.05 AT3G07820.1
Pectin lyase-like superfamily protein
Chr3_+_815550 11.05 AT3G03440.1
ARM repeat superfamily protein
Chr4_+_17440177 11.04 AT4G36990.1
heat shock factor 4
Chr1_+_6508797 11.00 AT1G18860.1
WRKY DNA-binding protein 61
Chr2_-_8447355 10.99 AT2G19500.1
cytokinin oxidase 2
Chr5_+_4460840 10.98 AT5G13820.1
telomeric DNA binding protein 1
Chr3_+_9887917 10.98 AT3G26830.1
Cytochrome P450 superfamily protein
Chr1_+_9748506 10.88 AT1G27980.1
dihydrosphingosine phosphate lyase
Chr1_+_20617313 10.87 AT1G55265.1
DUF538 family protein, putative (Protein of unknown function, DUF538)
Chr1_-_17706460 10.86 AT1G48000.1
myb domain protein 112
Chr2_-_7707954 10.85 AT2G17740.1
Cysteine/Histidine-rich C1 domain family protein
Chr4_-_14820595 10.84 AT4G30270.1
xyloglucan endotransglucosylase/hydrolase 24
Chr2_+_12767585 10.83 AT2G29950.1
ELF4-like 1
Chr5_-_10213598 10.75 AT5G28237.1
AT5G28237.2
Pyridoxal-5'-phosphate-dependent enzyme family protein
Chr4_-_15178849 10.75 AT4G31240.2
AT4G31240.1
protein kinase C-like zinc finger protein
Chr3_+_9685932 10.72 AT3G26470.1
Powdery mildew resistance protein, RPW8 domain-containing protein
Chr3_+_21381599 10.71 AT3G57680.3
Peptidase S41 family protein
Chr2_-_15425129 10.70 AT2G36800.1
don-glucosyltransferase 1
Chr3_-_7063372 10.70 AT3G20250.2
AT3G20250.1
pumilio 5
Chr3_-_829926 10.68 AT3G03480.1
acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase
Chr3_+_17692666 10.66 AT3G47950.1
H[+]-ATPase 4
Chr5_-_24702761 10.62 AT5G61430.2
AT5G61430.1
NAC domain containing protein 100
Chr4_+_585598 10.58 AT4G01430.1
AT4G01430.2
AT4G01430.3
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_13836954 10.57 AT1G36622.1
transmembrane protein
Chr1_-_5129731 10.52 AT1G14870.1
PLANT CADMIUM RESISTANCE 2
Chr5_-_22237370 10.52 AT5G54730.1
yeast autophagy 18 F-like protein
Chr4_-_10182264 10.52 AT4G18425.1
transmembrane protein, putative (DUF679)
Chr4_+_2238370 10.50 AT4G04500.2
AT4G04500.3
AT4G04500.1
cysteine-rich RLK (RECEPTOR-like protein kinase) 37
Chr1_-_6625856 10.50 AT1G19200.1
cyclin-dependent kinase, putative (DUF581)
Chr5_+_12558154 10.48 AT5G33290.1
xylogalacturonan deficient 1
Chr5_-_5862462 10.46 AT5G17760.2
AT5G17760.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_22236551 10.45 AT5G54730.2
yeast autophagy 18 F-like protein
Chr1_+_630374 10.40 AT1G02850.3
AT1G02850.2
AT1G02850.1
AT1G02850.5
AT1G02850.4
beta glucosidase 11
Chr3_+_17692853 10.40 AT3G47950.2
H[+]-ATPase 4
Chr1_-_11719988 10.38 AT1G32450.1
nitrate transporter 1.5
Chr5_-_1470937 10.36 AT5G04980.4
AT5G04980.3
AT5G04980.1
AT5G04980.2
DNAse I-like superfamily protein
Chr1_+_28740540 10.31 AT1G76590.1
PLATZ transcription factor family protein
Chr1_-_19278603 10.30 AT1G51890.4
AT1G51890.5
AT1G51890.3
AT1G51890.2
AT1G51890.1
Leucine-rich repeat protein kinase family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G76420

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
11.9 35.6 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
8.1 24.4 GO:0098534 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
7.3 21.8 GO:0015696 ammonium transport(GO:0015696)
5.5 16.4 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
5.4 21.6 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
5.3 15.8 GO:0010055 atrichoblast differentiation(GO:0010055)
5.2 15.6 GO:0071242 cellular response to ammonium ion(GO:0071242)
4.6 13.8 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
4.5 13.5 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
4.5 13.4 GO:0010446 response to alkaline pH(GO:0010446)
4.3 42.7 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
4.2 16.9 GO:0010272 response to silver ion(GO:0010272)
4.2 8.4 GO:0015802 basic amino acid transport(GO:0015802)
4.1 28.7 GO:0043090 amino acid import(GO:0043090)
4.1 20.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
3.8 18.9 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
3.7 26.1 GO:0009745 sucrose mediated signaling(GO:0009745)
3.6 10.9 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
3.6 18.1 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
3.6 10.7 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
3.5 14.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
3.4 10.3 GO:0070509 calcium ion import(GO:0070509)
3.4 20.6 GO:0006624 vacuolar protein processing(GO:0006624)
3.3 10.0 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
3.3 16.6 GO:0016137 glycoside metabolic process(GO:0016137)
3.3 13.2 GO:0034720 histone H3-K4 demethylation(GO:0034720)
3.2 9.5 GO:1902347 response to strigolactone(GO:1902347)
3.1 6.3 GO:0009963 positive regulation of flavonoid biosynthetic process(GO:0009963)
3.1 28.2 GO:0051410 detoxification of nitrogen compound(GO:0051410)
2.6 46.7 GO:0015996 chlorophyll catabolic process(GO:0015996) pigment catabolic process(GO:0046149)
2.5 15.1 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
2.5 7.5 GO:0048281 inflorescence morphogenesis(GO:0048281)
2.5 9.9 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
2.4 4.8 GO:1901601 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
2.3 16.4 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
2.3 9.3 GO:0009268 response to pH(GO:0009268)
2.3 9.2 GO:0010351 lithium ion transport(GO:0010351)
2.3 32.0 GO:0006826 iron ion transport(GO:0006826)
2.2 8.9 GO:0048480 stigma development(GO:0048480)
2.2 24.3 GO:0070370 cellular heat acclimation(GO:0070370)
2.1 8.2 GO:0044805 late nucleophagy(GO:0044805)
2.0 14.3 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
2.0 6.1 GO:0010024 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
2.0 6.1 GO:0035606 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
2.0 8.1 GO:0006527 arginine catabolic process(GO:0006527)
2.0 12.0 GO:1903428 positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
2.0 17.9 GO:0009819 drought recovery(GO:0009819)
1.9 34.6 GO:0010039 response to iron ion(GO:0010039)
1.8 11.0 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
1.8 9.1 GO:0015846 polyamine transport(GO:0015846)
1.7 7.0 GO:0009962 regulation of flavonoid biosynthetic process(GO:0009962)
1.7 17.5 GO:0016584 nucleosome positioning(GO:0016584)
1.7 8.7 GO:0060151 peroxisome localization(GO:0060151)
1.7 3.4 GO:0032025 response to cobalt ion(GO:0032025)
1.7 5.0 GO:2000693 positive regulation of seed maturation(GO:2000693)
1.7 28.4 GO:0010555 response to mannitol(GO:0010555)
1.6 9.9 GO:1900367 positive regulation of defense response to insect(GO:1900367)
1.6 16.3 GO:0009970 cellular response to sulfate starvation(GO:0009970)
1.6 9.8 GO:0043617 cellular response to sucrose starvation(GO:0043617)
1.6 4.9 GO:0044090 positive regulation of vacuole organization(GO:0044090)
1.6 17.7 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
1.6 30.2 GO:0002213 defense response to insect(GO:0002213)
1.6 50.7 GO:0043562 cellular response to nitrogen levels(GO:0043562)
1.5 23.1 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
1.5 10.6 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
1.5 7.5 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
1.5 7.5 GO:0046487 glyoxylate metabolic process(GO:0046487)
1.5 10.4 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
1.5 7.4 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
1.5 11.7 GO:0006570 tyrosine metabolic process(GO:0006570)
1.5 4.4 GO:0009660 amyloplast organization(GO:0009660)
1.5 7.3 GO:0019310 inositol catabolic process(GO:0019310)
1.5 4.4 GO:0010184 cytokinin transport(GO:0010184)
1.4 4.3 GO:0010508 positive regulation of autophagy(GO:0010508)
1.4 8.4 GO:0080190 lateral growth(GO:0080190)
1.4 44.7 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
1.4 4.1 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
1.3 8.1 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
1.3 8.0 GO:0043102 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
1.3 1.3 GO:0006499 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
1.3 3.9 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
1.3 6.5 GO:0006116 NADH oxidation(GO:0006116)
1.3 6.4 GO:0018874 benzoate metabolic process(GO:0018874)
1.3 10.2 GO:0030149 sphingolipid catabolic process(GO:0030149)
1.3 1.3 GO:0045851 pH reduction(GO:0045851)
1.3 6.3 GO:0006517 protein deglycosylation(GO:0006517)
1.3 3.8 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
1.2 7.4 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
1.2 13.5 GO:0015749 monosaccharide transport(GO:0015749)
1.2 28.1 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
1.2 7.3 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
1.2 3.6 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
1.2 14.1 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
1.2 48.8 GO:0006623 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
1.1 14.9 GO:0005987 sucrose catabolic process(GO:0005987)
1.1 6.8 GO:0000082 G1/S transition of mitotic cell cycle(GO:0000082)
1.1 9.0 GO:1902074 response to salt(GO:1902074)
1.1 3.3 GO:0006493 protein O-linked glycosylation(GO:0006493)
1.1 5.6 GO:0080187 floral organ senescence(GO:0080187)
1.1 11.0 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
1.1 5.4 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
1.1 3.2 GO:0033120 positive regulation of RNA splicing(GO:0033120)
1.1 6.4 GO:0046339 diacylglycerol metabolic process(GO:0046339)
1.1 7.4 GO:0009099 valine biosynthetic process(GO:0009099)
1.0 57.2 GO:0009749 response to glucose(GO:0009749)
1.0 2.9 GO:0045905 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
1.0 5.7 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
1.0 9.5 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
1.0 4.8 GO:0035627 ceramide transport(GO:0035627)
0.9 18.8 GO:0009269 response to desiccation(GO:0009269)
0.9 9.4 GO:0009610 response to symbiotic fungus(GO:0009610)
0.9 3.7 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.9 9.2 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.9 16.5 GO:0015770 sucrose transport(GO:0015770)
0.9 4.4 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.9 11.5 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.9 3.5 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.9 4.4 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.9 9.5 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.9 26.6 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.9 4.3 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.9 5.1 GO:1990118 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.8 3.4 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.8 42.3 GO:0002239 response to oomycetes(GO:0002239)
0.8 12.7 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.8 3.4 GO:0035494 SNARE complex disassembly(GO:0035494)
0.8 3.3 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.8 5.7 GO:0060866 leaf abscission(GO:0060866)
0.8 43.3 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.8 6.5 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.8 6.5 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.8 2.4 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.8 3.2 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.8 6.4 GO:0000304 response to singlet oxygen(GO:0000304)
0.8 3.2 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.8 13.4 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.8 2.3 GO:0035247 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.8 6.2 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.8 3.0 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.8 6.8 GO:0006560 proline metabolic process(GO:0006560)
0.8 4.6 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.8 7.6 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.8 2.3 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.7 3.7 GO:0001578 microtubule bundle formation(GO:0001578)
0.7 5.2 GO:1904481 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.7 8.1 GO:0030010 establishment of cell polarity(GO:0030010)
0.7 19.9 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.7 8.8 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.7 8.1 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.7 8.7 GO:0046855 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.7 2.8 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.7 10.5 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.7 9.1 GO:0046348 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.7 8.4 GO:0009682 induced systemic resistance(GO:0009682)
0.7 5.5 GO:0009942 longitudinal axis specification(GO:0009942)
0.7 2.0 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.7 2.7 GO:0050792 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.7 2.7 GO:0080093 regulation of photorespiration(GO:0080093)
0.7 12.0 GO:0009306 protein secretion(GO:0009306)
0.7 2.0 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.7 2.6 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.7 4.6 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.6 67.6 GO:0007568 aging(GO:0007568)
0.6 8.9 GO:0016119 carotene metabolic process(GO:0016119)
0.6 1.9 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.6 2.4 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.6 3.7 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.6 2.4 GO:0046835 carbohydrate phosphorylation(GO:0046835)
0.6 5.5 GO:0031221 arabinan metabolic process(GO:0031221)
0.6 3.0 GO:0051601 exocyst localization(GO:0051601)
0.6 7.1 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.6 7.7 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.6 7.1 GO:0006102 isocitrate metabolic process(GO:0006102)
0.6 14.6 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.6 3.5 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.6 16.3 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.6 22.1 GO:0032200 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.6 5.2 GO:0072348 sulfur compound transport(GO:0072348)
0.6 5.2 GO:0007584 response to nutrient(GO:0007584)
0.6 16.7 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.6 6.3 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.6 5.2 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.6 16.0 GO:0006012 galactose metabolic process(GO:0006012)
0.6 14.1 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.6 2.8 GO:1990019 protein storage vacuole organization(GO:1990019)
0.6 2.8 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.6 2.8 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.6 3.4 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.6 3.9 GO:0019058 viral life cycle(GO:0019058) viral genome replication(GO:0019079)
0.6 4.5 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.5 2.2 GO:0010587 miRNA catabolic process(GO:0010587)
0.5 1.6 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.5 38.7 GO:0071369 cellular response to ethylene stimulus(GO:0071369)
0.5 8.4 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.5 4.2 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.5 1.6 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.5 9.3 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.5 8.2 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.5 36.3 GO:0009867 jasmonic acid mediated signaling pathway(GO:0009867) cellular response to jasmonic acid stimulus(GO:0071395)
0.5 4.5 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.5 3.5 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.5 10.0 GO:0006914 autophagy(GO:0006914)
0.5 3.0 GO:0005513 detection of calcium ion(GO:0005513)
0.5 1.5 GO:0048451 petal formation(GO:0048451)
0.5 29.5 GO:0006972 hyperosmotic response(GO:0006972)
0.5 12.4 GO:0098754 detoxification(GO:0098754)
0.5 4.8 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.5 9.0 GO:0007030 Golgi organization(GO:0007030)
0.5 6.6 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.5 5.2 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.5 3.7 GO:0009061 anaerobic respiration(GO:0009061)
0.5 17.4 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.4 1.3 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891) toxin transport(GO:1901998)
0.4 6.6 GO:0007033 vacuole organization(GO:0007033)
0.4 11.3 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.4 3.4 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.4 3.0 GO:0044419 interspecies interaction between organisms(GO:0044419)
0.4 4.6 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.4 29.0 GO:0016579 protein deubiquitination(GO:0016579)
0.4 10.6 GO:0045727 positive regulation of translation(GO:0045727)
0.4 2.4 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.4 2.4 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.4 1.2 GO:0032878 regulation of establishment or maintenance of cell polarity(GO:0032878)
0.4 5.1 GO:0051262 protein tetramerization(GO:0051262)
0.4 5.7 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.4 6.8 GO:0055070 copper ion homeostasis(GO:0055070)
0.4 5.2 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.4 2.6 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.4 7.1 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.4 17.8 GO:0034605 cellular response to heat(GO:0034605)
0.4 2.6 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.4 4.0 GO:0070646 protein modification by small protein removal(GO:0070646)
0.4 7.9 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.4 8.6 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.4 9.1 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.3 1.0 GO:0046203 spermidine catabolic process(GO:0046203)
0.3 7.2 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.3 18.0 GO:0055046 microgametogenesis(GO:0055046)
0.3 1.7 GO:0009261 coenzyme catabolic process(GO:0009109) purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.3 32.4 GO:0010200 response to chitin(GO:0010200)
0.3 3.3 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.3 1.3 GO:0006741 NADP biosynthetic process(GO:0006741)
0.3 13.7 GO:0010256 endomembrane system organization(GO:0010256)
0.3 8.9 GO:0016575 histone deacetylation(GO:0016575)
0.3 1.2 GO:0036065 fucosylation(GO:0036065)
0.3 11.1 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.3 1.2 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.3 3.7 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.3 2.1 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.3 10.0 GO:0009911 positive regulation of flower development(GO:0009911)
0.3 3.3 GO:0032366 intracellular sterol transport(GO:0032366)
0.3 1.2 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.3 7.3 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.3 1.1 GO:0015855 allantoin transport(GO:0015720) pyrimidine nucleobase transport(GO:0015855) uracil transport(GO:0015857)
0.3 8.5 GO:0034050 plant-type hypersensitive response(GO:0009626) host programmed cell death induced by symbiont(GO:0034050)
0.3 44.0 GO:0071453 cellular response to decreased oxygen levels(GO:0036294) cellular response to oxygen levels(GO:0071453) cellular response to hypoxia(GO:0071456)
0.3 12.1 GO:0051084 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.3 2.2 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.3 0.8 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.3 6.7 GO:0042631 cellular response to water deprivation(GO:0042631)
0.3 19.5 GO:0031667 response to nutrient levels(GO:0031667)
0.3 1.1 GO:0006225 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.3 0.8 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865) abscisic acid transport(GO:0080168)
0.3 4.4 GO:0010214 seed coat development(GO:0010214)
0.3 27.3 GO:0043413 protein glycosylation(GO:0006486) glycoprotein metabolic process(GO:0009100) glycoprotein biosynthetic process(GO:0009101) macromolecule glycosylation(GO:0043413)
0.3 23.7 GO:0000209 protein polyubiquitination(GO:0000209)
0.3 3.6 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.3 4.6 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.2 7.6 GO:0031347 regulation of defense response(GO:0031347)
0.2 1.4 GO:0006828 manganese ion transport(GO:0006828)
0.2 4.0 GO:0010082 regulation of root meristem growth(GO:0010082)
0.2 10.3 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.2 2.5 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.2 2.3 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.2 4.2 GO:0010252 auxin homeostasis(GO:0010252)
0.2 1.9 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.2 7.2 GO:0009631 cold acclimation(GO:0009631)
0.2 2.7 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.2 3.3 GO:0000469 cleavage involved in rRNA processing(GO:0000469)
0.2 2.7 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.2 8.4 GO:0016197 endosomal transport(GO:0016197)
0.2 1.2 GO:0010044 response to aluminum ion(GO:0010044)
0.2 4.3 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.2 2.7 GO:0006265 DNA topological change(GO:0006265)
0.2 2.9 GO:0010440 stomatal lineage progression(GO:0010440)
0.2 1.7 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.2 3.0 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.2 10.7 GO:0009624 response to nematode(GO:0009624)
0.2 1.3 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.2 1.5 GO:0009560 embryo sac egg cell differentiation(GO:0009560)
0.2 0.9 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.2 8.6 GO:0009615 response to virus(GO:0009615)
0.2 1.1 GO:0010047 fruit dehiscence(GO:0010047)
0.2 6.6 GO:0018394 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.2 3.1 GO:0000373 Group II intron splicing(GO:0000373)
0.2 1.2 GO:0009880 embryonic pattern specification(GO:0009880)
0.2 3.1 GO:0010227 floral organ abscission(GO:0010227)
0.2 17.9 GO:0045087 innate immune response(GO:0045087)
0.2 0.7 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.2 10.3 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.2 0.6 GO:0007105 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.2 0.5 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.4 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 0.9 GO:0045860 positive regulation of kinase activity(GO:0033674) positive regulation of protein kinase activity(GO:0045860)
0.1 4.3 GO:0071805 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.1 1.1 GO:0060321 vesicle docking involved in exocytosis(GO:0006904) acceptance of pollen(GO:0060321)
0.1 4.5 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.1 1.0 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.1 1.0 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.1 3.1 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.1 4.9 GO:0006865 amino acid transport(GO:0006865)
0.1 1.3 GO:0043289 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.1 2.3 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.1 1.0 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.1 2.1 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.1 3.2 GO:0009960 endosperm development(GO:0009960)
0.1 0.5 GO:0015868 ADP transport(GO:0015866) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868) AMP transport(GO:0080121)
0.1 5.8 GO:0010431 seed maturation(GO:0010431)
0.1 2.7 GO:0030433 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.1 2.8 GO:0043067 regulation of programmed cell death(GO:0043067)
0.1 3.4 GO:0010224 response to UV-B(GO:0010224)
0.1 4.6 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.1 1.2 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.1 0.2 GO:0031572 mitotic G2 DNA damage checkpoint(GO:0007095) G2 DNA damage checkpoint(GO:0031572)
0.1 7.2 GO:0006457 protein folding(GO:0006457)
0.1 0.1 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.1 1.1 GO:0009704 de-etiolation(GO:0009704)
0.1 2.8 GO:0034249 negative regulation of translation(GO:0017148) negative regulation of cellular amide metabolic process(GO:0034249)
0.1 0.3 GO:0010358 leaf shaping(GO:0010358)
0.1 1.5 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.1 1.3 GO:0035265 organ growth(GO:0035265)
0.1 29.9 GO:0006508 proteolysis(GO:0006508)
0.1 1.1 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1 0.6 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.1 15.1 GO:0015031 protein transport(GO:0015031)
0.1 1.2 GO:0009959 negative gravitropism(GO:0009959)
0.1 1.5 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.1 1.9 GO:0034968 histone lysine methylation(GO:0034968)
0.1 2.9 GO:0009808 lignin metabolic process(GO:0009808)
0.1 5.1 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.1 12.1 GO:0006979 response to oxidative stress(GO:0006979)
0.1 0.7 GO:0007163 establishment or maintenance of cell polarity(GO:0007163)
0.1 0.4 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 3.8 GO:0009909 regulation of flower development(GO:0009909)
0.0 0.9 GO:0042325 regulation of phosphorylation(GO:0042325)
0.0 0.4 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.1 GO:0006083 acetate metabolic process(GO:0006083)
0.0 5.9 GO:0016311 dephosphorylation(GO:0016311)
0.0 0.1 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.0 0.9 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.1 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
8.1 24.4 GO:0005813 centrosome(GO:0005813) centriole(GO:0005814)
4.8 28.8 GO:0005776 autophagosome(GO:0005776)
3.6 32.2 GO:0017119 Golgi transport complex(GO:0017119)
3.4 10.3 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
2.9 20.1 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
1.9 5.8 GO:0009514 glyoxysome(GO:0009514)
1.8 10.9 GO:0055038 recycling endosome membrane(GO:0055038)
1.8 8.9 GO:0033263 CORVET complex(GO:0033263)
1.7 1.7 GO:0031021 interphase microtubule organizing center(GO:0031021)
1.6 9.8 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
1.5 10.8 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
1.5 5.9 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
1.3 6.5 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
1.1 9.1 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
1.1 17.5 GO:0000786 nucleosome(GO:0000786)
1.0 11.0 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.9 43.1 GO:0000323 lytic vacuole(GO:0000323)
0.9 7.4 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.9 21.6 GO:0000781 chromosome, telomeric region(GO:0000781)
0.8 3.2 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.8 15.2 GO:0031965 nuclear membrane(GO:0031965)
0.8 2.4 GO:0030874 nucleolar chromatin(GO:0030874)
0.8 19.6 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.7 13.0 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.7 4.2 GO:0017053 transcriptional repressor complex(GO:0017053)
0.7 6.1 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.6 5.7 GO:0000813 ESCRT I complex(GO:0000813)
0.6 6.2 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.6 21.9 GO:0010008 endosome membrane(GO:0010008)
0.6 19.1 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.6 36.3 GO:0031225 anchored component of membrane(GO:0031225)
0.5 2.7 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.5 1.6 GO:0032301 MutSalpha complex(GO:0032301)
0.5 2.1 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.5 28.9 GO:0005770 late endosome(GO:0005770)
0.5 44.1 GO:0005887 integral component of plasma membrane(GO:0005887)
0.4 11.6 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.4 7.3 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.4 3.8 GO:0009368 endopeptidase Clp complex(GO:0009368)
0.4 3.3 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.4 5.0 GO:0005769 early endosome(GO:0005769)
0.4 1.6 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.4 9.5 GO:0035097 histone methyltransferase complex(GO:0035097)
0.4 2.7 GO:0031298 replication fork protection complex(GO:0031298)
0.4 13.8 GO:0009504 cell plate(GO:0009504)
0.4 54.5 GO:0000325 plant-type vacuole(GO:0000325)
0.4 15.0 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.4 0.7 GO:0055037 recycling endosome(GO:0055037)
0.3 3.1 GO:0010168 ER body(GO:0010168)
0.3 4.4 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.3 1.6 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.3 3.3 GO:0031519 PcG protein complex(GO:0031519)
0.3 2.1 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.3 4.3 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.3 6.9 GO:0000118 histone deacetylase complex(GO:0000118)
0.3 0.8 GO:0070505 pollen coat(GO:0070505)
0.2 3.6 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.2 2.7 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.2 26.5 GO:0033646 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.2 2.3 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.2 2.1 GO:0000124 SAGA complex(GO:0000124)
0.2 74.0 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.2 25.8 GO:0000790 nuclear chromatin(GO:0000790)
0.2 2.4 GO:0008180 COP9 signalosome(GO:0008180)
0.2 6.7 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.2 3.9 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.2 13.7 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.2 1.8 GO:0072546 ER membrane protein complex(GO:0072546)
0.2 8.3 GO:0016592 mediator complex(GO:0016592)
0.2 6.2 GO:0031201 SNARE complex(GO:0031201)
0.2 3.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.2 9.0 GO:0005797 Golgi medial cisterna(GO:0005797)
0.2 3.1 GO:0030686 90S preribosome(GO:0030686)
0.2 1.4 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 1.0 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 16.3 GO:0005802 trans-Golgi network(GO:0005802)
0.1 9.0 GO:0005615 extracellular space(GO:0005615)
0.1 0.8 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 48.6 GO:0005774 vacuolar membrane(GO:0005774)
0.1 7.9 GO:0016604 nuclear body(GO:0016604)
0.1 1.1 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 34.5 GO:0005730 nucleolus(GO:0005730)
0.1 311.6 GO:0005886 plasma membrane(GO:0005886)
0.1 0.4 GO:0042788 polysomal ribosome(GO:0042788) translation preinitiation complex(GO:0070993)
0.1 4.0 GO:0030964 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 2.0 GO:0005871 kinesin complex(GO:0005871)
0.1 3.7 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 4.1 GO:0016591 DNA-directed RNA polymerase II, holoenzyme(GO:0016591)
0.1 4.4 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 3.8 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.2 GO:0070652 HAUS complex(GO:0070652)
0.0 0.1 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 0.2 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 2.3 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 0.1 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 1.3 GO:0005681 spliceosomal complex(GO:0005681)
0.0 94.7 GO:0005634 nucleus(GO:0005634)
0.0 4.7 GO:0005794 Golgi apparatus(GO:0005794)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
6.4 19.2 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
6.3 25.2 GO:0004556 alpha-amylase activity(GO:0004556)
6.0 23.8 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
5.7 17.2 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
5.5 16.6 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
4.8 19.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
4.8 14.3 GO:0050736 O-malonyltransferase activity(GO:0050736)
4.7 28.2 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
4.5 13.5 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
4.5 17.9 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
4.2 37.4 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
4.1 12.4 GO:0019776 Atg8 ligase activity(GO:0019776) Atg8 activating enzyme activity(GO:0019779)
3.7 11.1 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
3.7 18.3 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
3.5 13.8 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
3.4 10.3 GO:0015292 uniporter activity(GO:0015292)
3.2 22.7 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
3.2 22.5 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
3.0 30.4 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
2.9 31.7 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
2.6 20.6 GO:1901618 organic hydroxy compound transmembrane transporter activity(GO:1901618)
2.5 17.7 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
2.5 17.5 GO:0031492 nucleosomal DNA binding(GO:0031492)
2.5 9.9 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
2.5 12.3 GO:0033897 ribonuclease T2 activity(GO:0033897)
2.5 9.8 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
2.4 7.3 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
2.4 7.1 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
2.3 11.5 GO:0003680 AT DNA binding(GO:0003680)
2.3 18.3 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
2.3 20.3 GO:0008131 primary amine oxidase activity(GO:0008131)
2.2 8.7 GO:0030742 GTP-dependent protein binding(GO:0030742)
2.2 8.7 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
2.1 6.3 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
2.1 14.4 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
2.0 6.1 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
2.0 8.0 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
2.0 21.9 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
2.0 7.9 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
2.0 21.7 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
2.0 9.8 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
1.9 9.7 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
1.9 7.7 GO:0019172 glyoxalase III activity(GO:0019172)
1.9 7.7 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
1.9 5.7 GO:0035671 enone reductase activity(GO:0035671)
1.9 5.7 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
1.8 7.4 GO:0070034 telomerase RNA binding(GO:0070034)
1.8 9.1 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
1.8 19.5 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
1.8 14.1 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
1.7 5.2 GO:0043425 bHLH transcription factor binding(GO:0043425)
1.6 31.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
1.6 19.4 GO:0008061 chitin binding(GO:0008061)
1.6 24.1 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
1.6 6.4 GO:0008301 DNA binding, bending(GO:0008301)
1.5 10.8 GO:0004834 tryptophan synthase activity(GO:0004834)
1.5 7.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
1.5 11.8 GO:0001653 peptide receptor activity(GO:0001653)
1.5 7.3 GO:0050113 inositol oxygenase activity(GO:0050113)
1.4 8.6 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
1.4 5.7 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
1.4 15.7 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
1.3 8.1 GO:0008728 GTP diphosphokinase activity(GO:0008728)
1.3 13.4 GO:0004806 triglyceride lipase activity(GO:0004806)
1.3 18.2 GO:0004575 sucrose alpha-glucosidase activity(GO:0004575)
1.2 6.2 GO:0043682 copper-transporting ATPase activity(GO:0043682)
1.2 3.7 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
1.2 11.0 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
1.2 13.9 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
1.1 22.1 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
1.1 17.6 GO:0004568 chitinase activity(GO:0004568)
1.1 6.5 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
1.1 12.7 GO:0004930 G-protein coupled receptor activity(GO:0004930)
1.1 5.3 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
1.0 4.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
1.0 74.4 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
1.0 35.8 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
1.0 14.1 GO:0016844 strictosidine synthase activity(GO:0016844)
1.0 5.0 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
1.0 4.9 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
1.0 16.5 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
1.0 4.8 GO:1902387 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.9 5.5 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.9 2.7 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.9 2.6 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.9 3.5 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.9 2.6 GO:0008517 folic acid transporter activity(GO:0008517)
0.9 9.5 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.9 5.2 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.9 33.5 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.9 7.7 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.8 5.0 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.8 3.3 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.8 5.8 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.8 14.1 GO:0008066 glutamate receptor activity(GO:0008066)
0.8 2.3 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.8 11.6 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.7 5.2 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.7 28.1 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.7 3.6 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.7 40.8 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.7 6.4 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.7 2.8 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.7 26.1 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.7 4.2 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.7 7.6 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.7 4.8 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.7 52.5 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.7 2.0 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.7 24.5 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.7 10.5 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.6 29.9 GO:0003713 transcription coactivator activity(GO:0003713)
0.6 14.5 GO:0097602 cullin family protein binding(GO:0097602)
0.6 5.6 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.6 40.8 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.6 5.5 GO:0052745 inositol phosphate phosphatase activity(GO:0052745)
0.6 2.4 GO:0004335 galactokinase activity(GO:0004335)
0.6 7.9 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.6 8.9 GO:0004629 phospholipase C activity(GO:0004629)
0.6 22.8 GO:0004707 MAP kinase activity(GO:0004707)
0.6 4.5 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.6 3.4 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.6 3.4 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.6 1.7 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.6 69.8 GO:0019900 kinase binding(GO:0019900)
0.6 3.3 GO:0008417 fucosyltransferase activity(GO:0008417)
0.6 2.8 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.6 7.8 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.5 2.2 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.5 2.7 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.5 5.3 GO:0035198 miRNA binding(GO:0035198)
0.5 1.6 GO:0032138 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.5 2.6 GO:0015446 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.5 3.6 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.5 65.3 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.5 1.5 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.5 5.5 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.5 4.0 GO:0008083 growth factor activity(GO:0008083)
0.5 3.9 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.5 2.5 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.5 4.4 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.5 4.4 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.5 2.8 GO:0030527 structural constituent of chromatin(GO:0030527)
0.4 4.9 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.4 6.6 GO:0031491 nucleosome binding(GO:0031491)
0.4 5.7 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.4 3.0 GO:0017048 Rho GTPase binding(GO:0017048)
0.4 13.5 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.4 3.4 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.4 1.7 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.4 1.7 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.4 32.4 GO:0051213 dioxygenase activity(GO:0051213)
0.4 10.9 GO:0032934 sterol binding(GO:0032934)
0.4 2.7 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.4 12.1 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.4 16.2 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.4 1.1 GO:0002020 protease binding(GO:0002020)
0.4 2.6 GO:0001671 ATPase activator activity(GO:0001671)
0.4 6.2 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.4 24.1 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.4 1.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.3 2.4 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.3 2.4 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.3 1.0 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.3 2.4 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.3 6.6 GO:0008536 Ran GTPase binding(GO:0008536)
0.3 5.1 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.3 35.4 GO:0046982 protein heterodimerization activity(GO:0046982)
0.3 1.3 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.3 114.3 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.3 4.5 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.3 8.1 GO:0008134 transcription factor binding(GO:0008134)
0.3 2.1 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.3 5.0 GO:0003746 translation elongation factor activity(GO:0003746)
0.3 0.9 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.3 3.2 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.3 4.3 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.3 3.7 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.3 0.8 GO:0010331 gibberellin binding(GO:0010331)
0.3 1.1 GO:0033862 UMP kinase activity(GO:0033862)
0.3 1.9 GO:0004849 uridine kinase activity(GO:0004849)
0.3 6.7 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.3 2.1 GO:0008198 ferrous iron binding(GO:0008198)
0.3 7.3 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.3 12.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.3 4.6 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.2 9.4 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.2 2.7 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442) ATPase activity, coupled to transmembrane movement of ions, rotational mechanism(GO:0044769) proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.2 12.9 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.2 2.7 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.2 3.8 GO:0051117 ATPase binding(GO:0051117)
0.2 2.4 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.2 1.4 GO:0016426 tRNA (adenine) methyltransferase activity(GO:0016426)
0.2 1.2 GO:0004594 pantothenate kinase activity(GO:0004594)
0.2 9.4 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.2 1.1 GO:0015563 allantoin uptake transmembrane transporter activity(GO:0005274) pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.2 9.7 GO:0003993 acid phosphatase activity(GO:0003993)
0.2 3.8 GO:0035064 methylated histone binding(GO:0035064)
0.2 2.7 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.2 1.8 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 5.9 GO:0051787 misfolded protein binding(GO:0051787)
0.2 0.9 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.2 4.3 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.2 2.4 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.2 1.5 GO:0017070 U6 snRNA binding(GO:0017070)
0.2 1.6 GO:0051011 microtubule minus-end binding(GO:0051011)
0.2 10.2 GO:0032182 ubiquitin-like protein binding(GO:0032182) ubiquitin binding(GO:0043130)
0.2 6.0 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.2 0.9 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.2 6.9 GO:0004407 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.2 1.3 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.2 13.6 GO:0003727 single-stranded RNA binding(GO:0003727)
0.2 1.6 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.2 9.7 GO:0051020 GTPase binding(GO:0051020)
0.2 2.1 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.2 2.1 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.2 9.5 GO:0005484 SNAP receptor activity(GO:0005484)
0.2 7.9 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295)
0.2 8.9 GO:0016298 lipase activity(GO:0016298)
0.2 8.4 GO:0042393 histone binding(GO:0042393)
0.2 1.0 GO:0070063 RNA polymerase binding(GO:0070063)
0.2 5.4 GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811)
0.2 3.8 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.2 7.4 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.2 0.5 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.2 2.6 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 3.6 GO:0031386 protein tag(GO:0031386)
0.1 2.7 GO:0019887 protein kinase regulator activity(GO:0019887)
0.1 1.0 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 62.1 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.1 5.2 GO:0050897 cobalt ion binding(GO:0050897)
0.1 11.7 GO:0005516 calmodulin binding(GO:0005516)
0.1 12.5 GO:0051015 actin filament binding(GO:0051015)
0.1 3.3 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.1 9.9 GO:0004601 peroxidase activity(GO:0004601)
0.1 0.6 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 5.7 GO:0008320 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.1 5.3 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.1 4.1 GO:0003690 double-stranded DNA binding(GO:0003690)
0.1 2.7 GO:0051087 chaperone binding(GO:0051087)
0.1 78.3 GO:0043565 sequence-specific DNA binding(GO:0043565)
0.1 2.3 GO:0005096 GTPase activator activity(GO:0005096)
0.1 0.4 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.8 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 4.3 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 5.0 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 1.0 GO:0032451 demethylase activity(GO:0032451)
0.1 0.1 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.2 GO:0015245 fatty acid transporter activity(GO:0015245)
0.1 1.8 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.1 0.3 GO:0033744 peptide-methionine (S)-S-oxide reductase activity(GO:0008113) L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 0.6 GO:0016410 N-acyltransferase activity(GO:0016410)
0.0 0.7 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 5.1 GO:0005509 calcium ion binding(GO:0005509)
0.0 2.4 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 1.1 GO:0003779 actin binding(GO:0003779)
0.0 1.4 GO:0019843 rRNA binding(GO:0019843)
0.0 0.8 GO:0005179 hormone activity(GO:0005179)
0.0 0.6 GO:0004721 phosphoprotein phosphatase activity(GO:0004721)
0.0 0.9 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 0.4 GO:0016407 acetyltransferase activity(GO:0016407)
0.0 0.1 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.2 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.6 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 1.0 GO:0003724 RNA helicase activity(GO:0003724)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
3.2 9.5 SIG CHEMOTAXIS Genes related to chemotaxis
1.9 9.5 PID CIRCADIAN PATHWAY Circadian rhythm pathway
1.9 5.6 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
1.0 4.1 PID IL4 2PATHWAY IL4-mediated signaling events
1.0 2.9 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.9 2.8 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.6 2.3 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.5 3.3 PID NOTCH PATHWAY Notch signaling pathway
0.4 4.1 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.4 1.8 PID CDC42 PATHWAY CDC42 signaling events
0.3 3.5 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.2 0.4 PID SHP2 PATHWAY SHP2 signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 7.3 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
2.4 9.5 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
2.3 9.2 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
1.8 10.7 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
1.5 7.4 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
1.4 12.4 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
1.3 7.6 REACTOME APOPTOSIS Genes involved in Apoptosis
1.2 12.8 REACTOME G ALPHA I SIGNALLING EVENTS Genes involved in G alpha (i) signalling events
0.8 2.3 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.5 4.1 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.4 1.1 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.2 0.9 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.2 0.4 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.2 0.9 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.2 2.6 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.1 0.4 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 0.6 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.4 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport