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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G74930

Z-value: 0.54

Transcription factors associated with AT1G74930

Gene Symbol Gene ID Gene Info
AT1G74930
AT1G74930 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ORA47arTal_v1_Chr1_+_28143851_28143851-0.222.6e-01Click!

Activity profile of AT1G74930 motif

Sorted Z-values of AT1G74930 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_15828228 5.72 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr2_+_18558885 4.46 AT2G44990.2
AT2G44990.3
AT2G44990.1
CCD7
carotenoid cleavage dioxygenase 7
Chr4_-_13222376 2.54 AT4G26080.1
ABI1
Protein phosphatase 2C family protein
Chr5_+_23087122 2.28 AT5G57050.1
AT5G57050.3
AT5G57050.2
ABI2
Protein phosphatase 2C family protein
Chr4_+_14034536 2.12 AT4G28370.3
AT4G28370.2
AT4G28370.1
AT4G28370.4
AT4G28370
RING/U-box superfamily protein
Chr1_+_28070295 1.53 AT1G74710.1
AT1G74710.2
EDS16
ADC synthase superfamily protein
Chr1_-_29492875 1.17 AT1G78390.1
NCED9
nine-cis-epoxycarotenoid dioxygenase 9
Chr3_-_4834015 1.10 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
Chr5_-_979849 0.70 AT5G03730.1
AT5G03730.2
CTR1
Protein kinase superfamily protein
Chr5_+_1608988 0.50 AT5G05440.1
PYL5
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr4_+_446978 0.32 AT4G01026.1
PYL7
PYR1-like 7

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G74930

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.4 10.2 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.4 2.3 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.2 0.7 GO:0017145 stem cell division(GO:0017145)
0.2 2.3 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.2 1.5 GO:0060866 leaf abscission(GO:0060866)
0.1 0.8 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 2.5 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 4.8 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 12.5 GO:0009570 chloroplast stroma(GO:0009570)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 12.5 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.5 1.5 GO:0008909 isochorismate synthase activity(GO:0008909)
0.0 4.8 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.8 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.7 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.5 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.3 2.3 PID RAC1 PATHWAY RAC1 signaling pathway