GSE43616: Time-course of wild-type Arabidopsis leaf
Gene Symbol | Gene ID | Gene Info |
---|---|---|
AT1G74930
|
AT1G74930 | Integrase-type DNA-binding superfamily protein |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ORA47 | arTal_v1_Chr1_+_28143851_28143851 | -0.22 | 2.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
Chr4_+_15828228 | 5.72 |
AT4G32810.1
AT4G32810.2 |
CCD8
|
carotenoid cleavage dioxygenase 8 |
Chr2_+_18558885 | 4.46 |
AT2G44990.2
AT2G44990.3 AT2G44990.1 |
CCD7
|
carotenoid cleavage dioxygenase 7 |
Chr4_-_13222376 | 2.54 |
AT4G26080.1
|
ABI1
|
Protein phosphatase 2C family protein |
Chr5_+_23087122 | 2.28 |
AT5G57050.1
AT5G57050.3 AT5G57050.2 |
ABI2
|
Protein phosphatase 2C family protein |
Chr4_+_14034536 | 2.12 |
AT4G28370.3
AT4G28370.2 AT4G28370.1 AT4G28370.4 |
AT4G28370
|
RING/U-box superfamily protein |
Chr1_+_28070295 | 1.53 |
AT1G74710.1
AT1G74710.2 |
EDS16
|
ADC synthase superfamily protein |
Chr1_-_29492875 | 1.17 |
AT1G78390.1
|
NCED9
|
nine-cis-epoxycarotenoid dioxygenase 9 |
Chr3_-_4834015 | 1.10 |
AT3G14440.1
|
NCED3
|
nine-cis-epoxycarotenoid dioxygenase 3 |
Chr5_-_979849 | 0.70 |
AT5G03730.1
AT5G03730.2 |
CTR1
|
Protein kinase superfamily protein |
Chr5_+_1608988 | 0.50 |
AT5G05440.1
|
PYL5
|
Polyketide cyclase/dehydrase and lipid transport superfamily protein |
Chr4_+_446978 | 0.32 |
AT4G01026.1
|
PYL7
|
PYR1-like 7 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.4 | 10.2 | GO:0016118 | tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124) |
0.4 | 2.3 | GO:0046247 | carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247) |
0.2 | 0.7 | GO:0017145 | stem cell division(GO:0017145) |
0.2 | 2.3 | GO:0010205 | photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155) |
0.2 | 1.5 | GO:0060866 | leaf abscission(GO:0060866) |
0.1 | 0.8 | GO:0080163 | regulation of protein serine/threonine phosphatase activity(GO:0080163) |
0.0 | 2.5 | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway(GO:0009788) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.8 | GO:0008287 | protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293) |
0.0 | 12.5 | GO:0009570 | chloroplast stroma(GO:0009570) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 12.5 | GO:0010436 | carotenoid dioxygenase activity(GO:0010436) |
0.5 | 1.5 | GO:0008909 | isochorismate synthase activity(GO:0008909) |
0.0 | 4.8 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
0.0 | 0.8 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.0 | 0.7 | GO:0004712 | protein serine/threonine/tyrosine kinase activity(GO:0004712) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 2.5 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.3 | 2.3 | PID RAC1 PATHWAY | RAC1 signaling pathway |