ISMARA results: AT1G62990

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G62990

Z-value: 0.10

Transcription factors associated with AT1G62990

Gene Symbol	Gene ID	Gene Info
AT1G62990 TAIR	AT1G62990	homeobox knotted-like protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
KNAT7	arTal_v1_Chr1_+_23337167_23337167	0.53	3.5e-03	Click!

Activity profile of AT1G62990 motif

Sorted Z-values of AT1G62990 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr4_-_16063070_16063251 Show fit	0.19	AT4G33330.2 AT4G33330.1 AT4G33330.5 AT4G33330.3 AT4G33330.4	PGSIP3 TAIR Show fit	plant glycogenin-like starch initiation protein 3
arTal_v1_Chr2_-_14644355_14644355 Show fit	0.19	AT2G34710.1	PHB TAIR Show fit	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
arTal_v1_Chr1_+_27076020_27076020 Show fit	0.10	AT1G71930.1	VND7 TAIR Show fit	vascular related NAC-domain protein 7
arTal_v1_Chr1_+_27074702_27074702 Show fit	0.09	AT1G71930.2	VND7 TAIR Show fit	vascular related NAC-domain protein 7
arTal_v1_Chr5_+_24396981_24396981 Show fit	0.07	AT5G60690.1	REV TAIR Show fit	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Showing 1 to 5 of 5 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G62990

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0009855	determination of bilateral symmetry(GO:0009855)
0.0	0.2	GO:0090059	protoxylem development(GO:0090059)
0.0	0.2	GO:0010413	glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)

Showing 1 to 3 of 3 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0080116	glucuronoxylan glucuronosyltransferase activity(GO:0080116)

Showing 1 to 1 of 1 entries