ISMARA results: AT1G54060

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G54060

Z-value: 0.24

Transcription factors associated with AT1G54060

Gene Symbol	Gene ID	Gene Info
AT1G54060 TAIR	AT1G54060	6B-interacting protein 1-like 1

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
ASIL1	arTal_v1_Chr1_+_20180610_20180610	-0.84	2.3e-08	Click!

Activity profile of AT1G54060 motif

Sorted Z-values of AT1G54060 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr4_-_10316886_10316886 Show fit	0.77	AT4G18780.1	IRX1 TAIR Show fit	cellulose synthase family protein
arTal_v1_Chr3_+_6744377_6744377 Show fit	0.63	AT3G19450.1	ATCAD4 TAIR Show fit	GroES-like zinc-binding alcohol dehydrogenase family protein
arTal_v1_Chr5_-_19838235_19838235 Show fit	0.57	AT5G48930.1	HCT TAIR Show fit	hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
arTal_v1_Chr2_-_15589369_15589369 Show fit	0.43	AT2G37090.1	IRX9 TAIR Show fit	Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_+_5084524_5084695 Show fit	0.41	AT5G15630.1 AT5G15630.2 AT5G15630.3 AT5G15630.4 AT5G15630.5	IRX6 TAIR Show fit	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr4_+_16310409_16310409 Show fit	0.27	AT4G34050.3	CCoAOMT1 TAIR Show fit	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_+_16310768_16310815 Show fit	0.27	AT4G34050.1 AT4G34050.2	CCoAOMT1 TAIR Show fit	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_-_9531489_9531489 Show fit	0.17	AT1G27440.1	GUT2 TAIR Show fit	Exostosin family protein
arTal_v1_Chr5_-_4065075_4065075 Show fit	0.03	AT5G12870.1	MYB46 TAIR Show fit	myb domain protein 46

Showing 1 to 9 of 9 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G54060

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.8	GO:0010116	positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.0	0.6	GO:0010413	glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0	0.6	GO:0009963	positive regulation of flavonoid biosynthetic process(GO:0009963)
0.2	0.5	GO:0009805	coumarin biosynthetic process(GO:0009805)
0.0	0.4	GO:0052324	plant-type cell wall cellulose biosynthetic process(GO:0052324)

Showing 1 to 5 of 5 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.8	GO:0016760	cellulose synthase (UDP-forming) activity(GO:0016760)
0.1	0.6	GO:0047517	1,4-beta-D-xylan synthase activity(GO:0047517)
0.1	0.6	GO:0050734	hydroxycinnamoyltransferase activity(GO:0050734)
0.0	0.6	GO:0052747	sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1	0.5	GO:0042409	caffeoyl-CoA O-methyltransferase activity(GO:0042409)

Showing 1 to 5 of 5 entries