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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G53170

Z-value: 0.96

Transcription factors associated with AT1G53170

Gene Symbol Gene ID Gene Info
AT1G53170
AT1G53170 ethylene response factor 8

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF8arTal_v1_Chr1_-_19822399_19822399-0.232.4e-01Click!

Activity profile of AT1G53170 motif

Sorted Z-values of AT1G53170 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_14304921 2.35 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
Chr1_+_176141 1.78 AT1G01480.2
ACS2
1-amino-cyclopropane-1-carboxylate synthase 2
Chr1_+_175706 1.72 AT1G01480.1
ACS2
1-amino-cyclopropane-1-carboxylate synthase 2
Chr1_-_1349478 1.58 AT1G04800.1
AT1G04800
glycine-rich protein
Chr1_+_12851983 1.56 AT1G35140.1
PHI-1
Phosphate-responsive 1 family protein
Chr1_+_3157501 1.53 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr1_+_27452748 1.51 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr3_-_15704152 1.49 AT3G43850.1
AT3G43850
hypothetical protein
Chr4_-_9754161 1.48 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr3_-_8589754 1.47 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr2_+_18495215 1.45 AT2G44840.1
ERF13
ethylene-responsive element binding factor 13
Chr1_-_30129649 1.43 AT1G80080.1
TMM
Leucine-rich repeat (LRR) family protein
Chr3_-_18559326 1.42 AT3G50060.1
MYB77
myb domain protein 77
Chr5_-_24381599 1.41 AT5G60670.1
AT5G60670
Ribosomal protein L11 family protein
Chr5_-_3278461 1.40 AT5G10430.1
AGP4
arabinogalactan protein 4
Chr5_-_22560461 1.39 AT5G55730.2
AT5G55730.1
FLA1
FASCICLIN-like arabinogalactan 1
Chr4_-_9133161 1.35 AT4G16141.1
AT4G16141
GATA type zinc finger transcription factor family protein
Chr2_+_15127265 1.34 AT2G36026.1
AT2G36026
Ovate family protein
Chr4_-_7493080 1.32 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr4_+_1032350 1.31 AT4G02330.1
ATPMEPCRB
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_18098633 1.30 AT4G38770.1
PRP4
proline-rich protein 4
Chr1_+_218834 1.27 AT1G01600.1
CYP86A4
cytochrome P450, family 86, subfamily A, polypeptide 4
Chr5_+_4488476 1.26 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
Chr5_+_152446 1.26 AT5G01370.1
ACI1
ALC-interacting protein 1
Chr3_-_8902835 1.23 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
Chr1_-_28551836 1.23 AT1G76090.1
SMT3
sterol methyltransferase 3
Chr3_-_20576249 1.22 AT3G55500.1
EXPA16
expansin A16
Chr4_+_7758275 1.22 AT4G13340.1
LRX3
Leucine-rich repeat (LRR) family protein
Chr5_-_7652714 1.20 AT5G22880.1
HTB2
histone B2
Chr3_+_23345754 1.20 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr4_-_10278794 1.18 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
Chr3_+_4036945 1.18 AT3G12700.1
AT3G12700.3
AT3G12700.2
NANA
Eukaryotic aspartyl protease family protein
Chr1_+_28174187 1.18 AT1G75030.1
TLP-3
thaumatin-like protein 3
Chr4_+_5839599 1.17 AT4G09160.1
AT4G09160.2
AT4G09160.3
AT4G09160
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr1_-_30041952 1.16 AT1G79850.1
RPS17
ribosomal protein S17
Chr5_-_26129547 1.16 AT5G65390.1
AGP7
arabinogalactan protein 7
Chr3_+_19421397 1.16 AT3G52380.1
CP33
chloroplast RNA-binding protein 33
Chr4_+_17524461 1.15 AT4G37240.1
AT4G37240
HTH-type transcriptional regulator
Chr1_+_4934120 1.15 AT1G14430.1
AT1G14430
glyoxal oxidase-related protein
Chr1_+_7032070 1.14 AT1G20310.1
AT1G20310
syringolide-induced protein
Chr1_-_8075037 1.13 AT1G22810.1
AT1G22810
Integrase-type DNA-binding superfamily protein
Chr1_+_29575806 1.13 AT1G78630.1
emb1473
Ribosomal protein L13 family protein
Chr1_-_3518035 1.12 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr2_-_7496292 1.11 AT2G17230.1
EXL5
EXORDIUM like 5
Chr5_-_671687 1.11 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
Chr4_+_14149849 1.11 AT4G28660.1
AT4G28660.2
PSB28
photosystem II reaction center PSB28 protein
Chr1_+_5448611 1.10 AT1G15830.1
AT1G15830.3
AT1G15830
hypothetical protein
Chr4_+_16708552 1.10 AT4G35100.2
PIP3
plasma membrane intrinsic protein 3
Chr4_+_16708361 1.10 AT4G35100.1
PIP3
plasma membrane intrinsic protein 3
Chr2_-_18744322 1.10 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
Chr3_-_1010573 1.08 AT3G03920.1
AT3G03920
H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
Chr2_+_18145439 1.08 AT2G43800.1
AT2G43800
Actin-binding FH2 (formin homology 2) family protein
Chr1_+_310169 1.07 AT1G01900.1
SBTI1.1
subtilase family protein
Chr1_-_8940613 1.07 AT1G25450.1
KCS5
3-ketoacyl-CoA synthase 5
Chr5_+_2202364 1.05 AT5G07090.1
AT5G07090.3
AT5G07090.2
AT5G07090
Ribosomal protein S4 (RPS4A) family protein
Chr3_+_21701520 1.04 AT3G58660.1
AT3G58660
Ribosomal protein L1p/L10e family
Chr3_+_5187082 1.04 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
Chr5_+_7014662 1.04 AT5G20720.1
AT5G20720.4
AT5G20720.2
AT5G20720.3
CPN20
chaperonin 20
Chr5_+_19179881 1.04 AT5G47230.1
ERF5
ethylene responsive element binding factor 5
Chr4_-_12393982 1.02 AT4G23810.1
WRKY53
WRKY family transcription factor
Chr1_-_20648891 1.02 AT1G55330.1
AGP21
arabinogalactan protein 21
Chr4_-_6464544 1.02 AT4G10450.2
AT4G10450.1
AT4G10450
Ribosomal protein L6 family
Chr1_+_7886323 1.01 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_-_17979740 1.00 AT4G38400.1
AT4G38401.1
EXLA2
AT4G38401
expansin-like A2
hypothetical protein
Chr3_+_5314817 1.00 AT3G15680.1
AT3G15680.2
AT3G15680
Ran BP2/NZF zinc finger-like superfamily protein
Chr5_+_26136002 1.00 AT5G65410.1
HB25
homeobox protein 25
Chr1_-_22317070 1.00 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr4_+_8913653 1.00 AT4G15620.1
AT4G15620
Uncharacterized protein family (UPF0497)
Chr1_-_4053871 1.00 AT1G12000.1
AT1G12000
Phosphofructokinase family protein
Chr3_+_5505360 0.99 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
Chr1_-_2972334 0.99 AT1G09200.1
AT1G09200
Histone superfamily protein
Chr1_+_6679281 0.98 AT1G19320.1
AT1G19320
Pathogenesis-related thaumatin superfamily protein
Chr2_+_17527167 0.98 AT2G41990.1
AT2G41990
late embryogenesis abundant protein
Chr2_+_1025 0.98 AT2G01008.1
AT2G01008
maternal effect embryo arrest protein
Chr1_-_29635931 0.96 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr1_+_3901950 0.96 AT1G11600.1
CYP77B1
cytochrome P450, family 77, subfamily B, polypeptide 1
Chr3_+_6227341 0.96 AT3G18170.2
AT3G18170
Glycosyltransferase family 61 protein
Chr3_-_18883033 0.95 AT3G50800.1
AT3G50800
hypothetical protein
Chr3_+_6228342 0.95 AT3G18170.1
AT3G18170
Glycosyltransferase family 61 protein
Chr2_-_13864596 0.94 AT2G32690.2
AT2G32690.3
AT2G32690.5
AT2G32690.4
AT2G32690.1
GRP23
glycine-rich protein 23
Chr1_-_6278150 0.94 AT1G18250.2
AT1G18250.1
ATLP-1
Pathogenesis-related thaumatin superfamily protein
Chr1_-_17957719 0.94 AT1G48570.1
AT1G48570
zinc finger (Ran-binding) family protein
Chr1_+_2263037 0.94 AT1G07370.1
PCNA1
proliferating cellular nuclear antigen 1
Chr3_+_8648669 0.94 AT3G23940.1
AT3G23940.2
AT3G23940
dehydratase family
Chr4_-_18067873 0.93 AT4G38660.2
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr3_-_9492655 0.93 AT3G25920.1
RPL15
ribosomal protein L15
Chr5_+_23559474 0.93 AT5G58250.1
EMB3143
YCF54
Chr3_+_6105908 0.93 AT3G17840.1
RLK902
receptor-like kinase 902
Chr2_+_13676389 0.93 AT2G32200.2
AT2G32200.1
AT2G32200
cysteine-rich/transmembrane domain A-like protein
Chr4_+_12686459 0.92 AT4G24570.1
DIC2
dicarboxylate carrier 2
Chr3_-_2175686 0.92 AT3G06880.1
AT3G06880.5
AT3G06880.4
AT3G06880.3
AT3G06880.2
AT3G06880
Transducin/WD40 repeat-like superfamily protein
Chr5_-_24172975 0.92 AT5G60030.2
AT5G60030.3
AT5G60030.1
AT5G60030
hypothetical protein
Chr4_-_18080083 0.92 AT4G38710.2
AT4G38710.1
AT4G38710
glycine-rich protein
Chr3_+_3910481 0.92 AT3G12270.1
PRMT3
protein arginine methyltransferase 3
Chr2_-_10254641 0.92 AT2G24120.1
AT2G24120.2
SCA3
DNA/RNA polymerases superfamily protein
Chr1_-_8961183 0.91 AT1G25510.1
AT1G25510
Eukaryotic aspartyl protease family protein
Chr5_-_20111806 0.91 AT5G49560.1
AT5G49560
Putative methyltransferase family protein
Chr3_+_2953693 0.91 AT3G09630.1
AT3G09630.2
AT3G09630
Ribosomal protein L4/L1 family
Chr1_-_8235019 0.91 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_28746833 0.91 AT1G76600.1
AT1G76600
poly polymerase
Chr4_-_16376666 0.91 AT4G34200.1
EDA9
D-3-phosphoglycerate dehydrogenase
Chr1_-_21092659 0.90 AT1G56340.2
AT1G56340.1
CRT1a
calreticulin 1a
Chr4_-_13194124 0.90 AT4G25990.1
AT4G25990.3
CIL
CCT motif family protein
Chr3_+_21671433 0.90 AT3G58610.1
AT3G58610.3
AT3G58610.2
AT3G58610
ketol-acid reductoisomerase
Chr3_+_16569051 0.89 AT3G45230.1
AT3G45230
hydroxyproline-rich glycoprotein family protein
Chr1_-_28581315 0.89 AT1G76160.1
sks5
SKU5 similar 5
Chr1_+_17918207 0.88 AT1G48480.1
RKL1
receptor-like kinase 1
Chr1_+_2001382 0.88 AT1G06530.1
PMD2
Tropomyosin-like protein
Chr2_+_1281754 0.88 AT2G04030.1
AT2G04030.2
CR88
Chaperone protein htpG family protein
Chr1_-_28554810 0.88 AT1G76100.1
AT1G76100.2
PETE1
plastocyanin 1
Chr3_+_3301887 0.88 AT3G10570.1
CYP77A6
cytochrome P450, family 77, subfamily A, polypeptide 6
Chr1_-_23675949 0.88 AT1G63810.1
AT1G63810.2
AT1G63810
nucleolar protein
Chr5_-_2993213 0.88 AT5G09650.1
PPa6
pyrophosphorylase 6
Chr1_+_7238693 0.87 AT1G20823.1
AT1G20823
RING/U-box superfamily protein
Chr4_-_13910995 0.87 AT4G27950.1
CRF4
cytokinin response factor 4
Chr4_-_13958107 0.87 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_+_14216771 0.86 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr2_+_16049918 0.86 AT2G38310.1
PYL4
PYR1-like 4
Chr5_+_657675 0.86 AT5G02870.1
AT5G02870.2
AT5G02870
Ribosomal protein L4/L1 family
Chr2_-_19638678 0.85 AT2G47990.1
SWA1
transducin family protein / WD-40 repeat family protein
Chr2_-_15137012 0.85 AT2G36050.1
OFP15
ovate family protein 15
Chr2_-_15797059 0.85 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_-_19272892 0.84 AT5G47500.1
PME5
Pectin lyase-like superfamily protein
Chr4_-_18068293 0.84 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr1_-_26327965 0.84 AT1G69900.1
AT1G69900
Actin cross-linking protein
Chr5_+_21848035 0.84 AT5G53800.1
AT5G53800
nucleic acid-binding protein
Chr2_+_19521774 0.84 AT2G47590.1
PHR2
photolyase/blue-light receptor 2
Chr2_+_19393584 0.84 AT2G47240.3
LACS1
AMP-dependent synthetase and ligase family protein
Chr3_+_9460433 0.83 AT3G25860.1
LTA2
2-oxoacid dehydrogenases acyltransferase family protein
Chr2_+_19394106 0.83 AT2G47240.4
LACS1
AMP-dependent synthetase and ligase family protein
Chr4_-_545566 0.83 AT4G01310.1
AT4G01310
Ribosomal L5P family protein
Chr5_-_23207926 0.83 AT5G57290.3
AT5G57290.2
AT5G57290.1
AT5G57290
60S acidic ribosomal protein family
Chr4_+_10453904 0.83 AT4G19100.2
PAM68
PAM68-like protein (DUF3464)
Chr4_+_14566183 0.83 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4
Chr4_+_6887166 0.83 AT4G11320.1
AT4G11320.2
AT4G11320
Papain family cysteine protease
Chr4_+_16410791 0.82 AT4G34290.1
AT4G34290
SWIB/MDM2 domain superfamily protein
Chr4_-_13193620 0.82 AT4G25990.2
CIL
CCT motif family protein
Chr1_+_3999157 0.82 AT1G11850.2
AT1G11850.4
AT1G11850.3
AT1G11850.1
AT1G11850
transmembrane protein
Chr2_+_15445294 0.82 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr3_-_19810520 0.82 AT3G53430.1
AT3G53430
Ribosomal protein L11 family protein
Chr5_+_15742543 0.82 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
Chr3_-_21166138 0.82 AT3G57180.1
BPG2
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_23678002 0.82 AT5G58580.1
ATL63
TOXICOS EN LEVADURA 63
Chr5_-_442187 0.81 AT5G02220.1
AT5G02220
cyclin-dependent kinase inhibitor
Chr5_+_18537239 0.81 AT5G45700.1
AT5G45700
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr2_+_13678910 0.81 AT2G32220.1
AT2G32220
Ribosomal L27e protein family
Chr4_+_10453415 0.81 AT4G19100.1
PAM68
PAM68-like protein (DUF3464)
Chr3_+_18973126 0.81 AT3G51080.1
GATA6
GATA transcription factor 6
Chr1_-_11333540 0.81 AT1G31660.1
AT1G31660
bystin-like protein
Chr3_-_20816035 0.80 AT3G56090.1
FER3
ferritin 3
Chr5_-_7934547 0.80 AT5G23530.1
CXE18
carboxyesterase 18
Chr1_-_7958464 0.80 AT1G22530.2
AT1G22530.1
PATL2
PATELLIN 2
Chr4_+_1374160 0.80 AT4G03100.1
AT4G03100
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr1_+_30287763 0.80 AT1G80560.1
IMD2
isopropylmalate dehydrogenase 2
Chr5_+_7676938 0.80 AT5G22940.2
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr1_+_18542061 0.80 AT1G50040.1
AT1G50040
formin-like protein, putative (DUF1005)
Chr5_+_16202142 0.80 AT5G40460.1
AT5G40460
cyclin-dependent kinase inhibitor SMR3-like protein
Chr5_-_5310951 0.80 AT5G16250.1
AT5G16250
transmembrane protein
Chr3_-_17486347 0.80 AT3G47450.1
AT3G47450.2
NOA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_17457614 0.79 AT3G47380.1
AT3G47380
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_+_19392744 0.79 AT2G47240.2
LACS1
AMP-dependent synthetase and ligase family protein
Chr4_-_13496738 0.79 AT4G26830.1
AT4G26830.2
AT4G26830
O-Glycosyl hydrolases family 17 protein
Chr3_-_15617149 0.79 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_15617309 0.79 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_6853106 0.79 AT5G20290.1
AT5G20290
Ribosomal protein S8e family protein
Chr5_-_20940895 0.79 AT5G51550.1
EXL3
EXORDIUM like 3
Chr2_+_19392497 0.78 AT2G47240.1
LACS1
AMP-dependent synthetase and ligase family protein
Chr1_+_26604855 0.78 AT1G70560.1
TAA1
tryptophan aminotransferase of Arabidopsis 1
Chr1_+_5448060 0.78 AT1G15830.2
AT1G15830
hypothetical protein
Chr3_+_10324788 0.78 AT3G27850.1
RPL12-C
ribosomal protein L12-C
Chr1_-_11436607 0.78 AT1G31860.1
AT1G31860.3
AT1G31860.2
AT-IE
histidine biosynthesis bifunctional protein (HISIE)
Chr3_+_6101753 0.78 AT3G17830.1
AT3G17830
Molecular chaperone Hsp40/DnaJ family protein
Chr1_-_2190784 0.78 AT1G07135.1
AT1G07135
glycine-rich protein
Chr3_-_6980523 0.78 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr5_-_16832357 0.77 AT5G42110.1
AT5G42110
hypothetical protein
Chr5_-_7026533 0.77 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_2249133 0.77 AT1G07320.2
AT1G07320.3
AT1G07320.4
RPL4
ribosomal protein L4
Chr5_+_3441751 0.77 AT5G10920.1
AT5G10920
L-Aspartase-like family protein
Chr4_-_13106864 0.77 AT4G25730.1
AT4G25730
FtsJ-like methyltransferase family protein
Chr3_+_8624636 0.76 AT3G23890.1
AT3G23890.2
TOPII
topoisomerase II
Chr2_-_13392927 0.76 AT2G31410.1
AT2G31410
coiled-coil protein
Chr3_+_7887276 0.76 AT3G22310.1
AT3G22310.2
PMH1
putative mitochondrial RNA helicase 1
Chr3_-_23015956 0.76 AT3G62160.1
AT3G62160
HXXXD-type acyl-transferase family protein
Chr3_-_7496371 0.76 AT3G21300.1
AT3G21300
RNA methyltransferase family protein
Chr5_-_25373904 0.76 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
Chr5_-_753657 0.76 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
Chr3_+_10076809 0.76 AT3G27280.1
AT3G27280.2
PHB4
prohibitin 4
Chr5_+_23167774 0.76 AT5G57180.1
AT5G57180.2
AT5G57180.4
AT5G57180.3
CIA2
chloroplast import apparatus 2
Chr5_+_7676662 0.76 AT5G22940.1
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr4_-_13983717 0.75 AT4G28180.1
AT4G28180
hypothetical protein
Chr1_+_907523 0.75 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
Chr2_-_15789605 0.75 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr2_+_10662190 0.75 AT2G25060.1
ENODL14
early nodulin-like protein 14
Chr2_+_19472573 0.75 AT2G47450.1
CAO
chloroplast signal recognition particle component (CAO)
Chr4_-_1046993 0.75 AT4G02380.2
AT4G02380.1
AT4G02380.3
SAG21
senescence-associated gene 21
Chr2_-_15560755 0.75 AT2G37040.1
PAL1
PHE ammonia lyase 1
Chr5_-_24987811 0.74 AT5G62210.1
AT5G62210
Embryo-specific protein 3, (ATS3)
Chr3_+_21680027 0.74 AT3G58620.1
AT3G58620.2
TTL4
tetratricopetide-repeat thioredoxin-like 4
Chr1_+_9393653 0.74 AT1G27050.1
AT1G27050
homeobox leucine zipper protein
Chr3_-_7377186 0.74 AT3G21055.1
AT3G21055.2
PSBTN
photosystem II subunit T

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G53170

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.5 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.7 2.7 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.5 1.4 GO:0006110 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.5 1.4 GO:0010198 synergid death(GO:0010198)
0.5 1.4 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.4 1.7 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.4 2.3 GO:0006272 leading strand elongation(GO:0006272)
0.3 1.0 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.3 0.7 GO:0009590 detection of gravity(GO:0009590)
0.3 2.9 GO:0006549 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.3 1.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.3 0.9 GO:0019354 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.3 0.3 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.3 2.0 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.3 1.4 GO:0010376 stomatal complex formation(GO:0010376)
0.3 1.7 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.3 1.1 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.3 0.8 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.3 0.8 GO:0080051 cutin transport(GO:0080051)
0.2 0.7 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.2 1.2 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.2 1.4 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.7 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.2 0.9 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.2 4.0 GO:0006949 syncytium formation(GO:0006949)
0.2 0.8 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.2 5.9 GO:0010143 cutin biosynthetic process(GO:0010143)
0.2 1.0 GO:0006884 cell volume homeostasis(GO:0006884)
0.2 0.4 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.2 0.6 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 1.3 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.2 1.7 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 2.4 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.2 0.5 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.2 0.3 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.2 1.3 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.2 0.5 GO:0010481 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.2 2.4 GO:0046451 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.2 0.3 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 0.8 GO:0019218 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.2 0.6 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.2 2.0 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.4 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 1.6 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.6 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 1.9 GO:0032544 plastid translation(GO:0032544)
0.1 0.6 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.1 0.4 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.1 0.6 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.1 1.8 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.1 0.4 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.4 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.1 0.4 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.1 2.7 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.7 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 2.7 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.1 0.8 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.6 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.8 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 1.1 GO:0033206 meiotic cytokinesis(GO:0033206)
0.1 1.0 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 0.8 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.1 0.7 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.6 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.6 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.1 0.1 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.5 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.1 0.5 GO:0009650 UV protection(GO:0009650)
0.1 0.2 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.1 0.6 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 0.7 GO:0015855 pyrimidine nucleobase transport(GO:0015855) uracil transport(GO:0015857)
0.1 0.7 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 0.5 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 1.4 GO:0080086 stamen filament development(GO:0080086)
0.1 0.6 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.2 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.1 1.1 GO:0016584 nucleosome positioning(GO:0016584)
0.1 0.7 GO:0046125 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.1 0.8 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 0.2 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.1 1.0 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 3.2 GO:0042335 cuticle development(GO:0042335)
0.1 1.0 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.1 0.3 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.6 GO:0000719 photoreactive repair(GO:0000719)
0.1 0.4 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.3 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 0.5 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.1 1.0 GO:0016553 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.1 1.2 GO:0080111 DNA demethylation(GO:0080111)
0.1 0.4 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.1 0.3 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 1.2 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 2.1 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 0.4 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 3.0 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 0.3 GO:0007349 cellularization(GO:0007349)
0.1 0.5 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.4 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 1.3 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.1 0.5 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 1.1 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.1 0.4 GO:0042040 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.1 0.3 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.1 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.1 0.2 GO:0071276 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.1 1.3 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.3 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.1 1.1 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.1 0.6 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.8 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 0.2 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 0.3 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.7 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.4 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 2.6 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.1 0.3 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.1 3.4 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.1 0.4 GO:0010362 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.1 0.4 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 1.2 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.1 0.4 GO:0019079 viral genome replication(GO:0019079)
0.1 0.4 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 1.0 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.1 1.1 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.1 1.8 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 0.7 GO:0070131 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.1 1.2 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.9 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.4 GO:1903426 regulation of reactive oxygen species biosynthetic process(GO:1903426)
0.1 0.5 GO:0042436 indole glucosinolate catabolic process(GO:0042344) indole-containing compound catabolic process(GO:0042436)
0.1 0.4 GO:0006106 fumarate metabolic process(GO:0006106)
0.1 0.4 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.1 0.8 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.6 GO:0042360 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.1 1.7 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 2.4 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.1 0.4 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.1 0.3 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.3 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 0.3 GO:0019343 cysteine biosynthetic process via cystathionine(GO:0019343)
0.1 0.2 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.3 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 1.2 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.1 1.2 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 0.6 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.4 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.5 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.2 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.1 0.4 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.1 GO:0046886 positive regulation of auxin biosynthetic process(GO:0010601) positive regulation of hormone biosynthetic process(GO:0046886)
0.1 0.4 GO:0071731 response to nitric oxide(GO:0071731)
0.1 0.2 GO:0055047 generative cell mitosis(GO:0055047)
0.1 1.0 GO:0044774 mitotic DNA integrity checkpoint(GO:0044774)
0.1 0.1 GO:0032352 positive regulation of hormone metabolic process(GO:0032352) positive regulation of auxin metabolic process(GO:0090355)
0.1 0.6 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.1 0.9 GO:0010274 hydrotropism(GO:0010274)
0.1 0.4 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.1 0.3 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.1 0.6 GO:0006167 AMP biosynthetic process(GO:0006167) AMP salvage(GO:0044209)
0.1 0.3 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 0.5 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.1 0.4 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.1 3.3 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 0.4 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 0.3 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.1 0.2 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.1 1.4 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.7 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.1 0.4 GO:0080117 secondary growth(GO:0080117)
0.1 0.7 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.1 1.0 GO:0000959 mitochondrial RNA metabolic process(GO:0000959)
0.1 1.3 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 0.1 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.4 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.1 0.7 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 0.1 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.1 0.4 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.1 0.4 GO:0006021 inositol biosynthetic process(GO:0006021)
0.1 0.3 GO:0006216 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.1 0.3 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.3 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.1 0.4 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 0.5 GO:0046471 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.1 0.3 GO:0032102 negative regulation of response to biotic stimulus(GO:0002832) negative regulation of response to external stimulus(GO:0032102)
0.0 0.7 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.3 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 0.1 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.0 0.7 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 1.1 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 1.8 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 1.2 GO:0042181 ketone biosynthetic process(GO:0042181)
0.0 0.5 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.4 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.0 0.4 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.0 1.2 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.2 GO:0043692 monoterpene metabolic process(GO:0043692)
0.0 0.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.5 GO:0010315 auxin efflux(GO:0010315)
0.0 1.0 GO:0052386 cell wall thickening(GO:0052386)
0.0 3.7 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.2 GO:0070206 protein trimerization(GO:0070206)
0.0 0.2 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.1 GO:0000727 double-strand break repair via break-induced replication(GO:0000727)
0.0 0.4 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.0 0.1 GO:0006183 GTP biosynthetic process(GO:0006183)
0.0 1.3 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.3 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.0 0.4 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.2 GO:1903959 regulation of anion channel activity(GO:0010359) regulation of anion transmembrane transport(GO:1903959)
0.0 0.5 GO:0031935 regulation of chromatin silencing(GO:0031935)
0.0 0.1 GO:0034059 response to anoxia(GO:0034059)
0.0 0.2 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.5 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 1.3 GO:0048825 cotyledon development(GO:0048825)
0.0 0.2 GO:0052652 cyclic nucleotide biosynthetic process(GO:0009190) cyclic purine nucleotide metabolic process(GO:0052652)
0.0 1.3 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.3 GO:0044839 G2/M transition of mitotic cell cycle(GO:0000086) cell cycle G2/M phase transition(GO:0044839)
0.0 0.5 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.2 GO:0010731 protein glutathionylation(GO:0010731)
0.0 1.0 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.1 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.0 0.1 GO:0043486 histone exchange(GO:0043486)
0.0 0.6 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 2.5 GO:0010087 phloem or xylem histogenesis(GO:0010087)
0.0 0.0 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.0 0.2 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.7 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.7 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 0.3 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 14.7 GO:0006412 translation(GO:0006412)
0.0 0.7 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.1 GO:0030837 negative regulation of actin filament polymerization(GO:0030837)
0.0 0.2 GO:0015919 peroxisomal membrane transport(GO:0015919)
0.0 0.3 GO:0016556 mRNA modification(GO:0016556)
0.0 0.6 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.2 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.1 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.0 1.7 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.3 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.5 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.1 GO:0009799 specification of symmetry(GO:0009799)
0.0 0.1 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.1 GO:0051056 pollen tube adhesion(GO:0009865) regulation of Ras protein signal transduction(GO:0046578) regulation of small GTPase mediated signal transduction(GO:0051056) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.0 0.1 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.0 0.3 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.6 GO:0032392 DNA geometric change(GO:0032392) DNA duplex unwinding(GO:0032508)
0.0 0.5 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 0.0 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.0 0.4 GO:0015770 sucrose transport(GO:0015770)
0.0 0.5 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.1 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.3 GO:0009641 shade avoidance(GO:0009641)
0.0 0.1 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.2 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.0 0.2 GO:0051293 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.0 0.3 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.3 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.3 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.4 GO:0007140 male meiosis(GO:0007140)
0.0 0.2 GO:0044030 regulation of DNA methylation(GO:0044030)
0.0 0.5 GO:0006606 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.0 0.2 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 0.6 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.8 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.2 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.1 GO:0048462 carpel formation(GO:0048462)
0.0 0.1 GO:0051298 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.0 0.1 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.0 0.0 GO:0032196 transposition(GO:0032196)
0.0 0.3 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 0.1 GO:0010338 leaf formation(GO:0010338)
0.0 0.2 GO:0048564 photosystem I assembly(GO:0048564)
0.0 0.3 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.0 0.3 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.4 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 0.0 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.0 0.2 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.0 0.8 GO:0006897 endocytosis(GO:0006897)
0.0 0.5 GO:0018208 peptidyl-proline modification(GO:0018208)
0.0 0.3 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.0 0.3 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.6 GO:0009646 response to absence of light(GO:0009646)
0.0 0.1 GO:0007043 cell-cell junction assembly(GO:0007043)
0.0 0.6 GO:0009226 nucleotide-sugar biosynthetic process(GO:0009226)
0.0 0.1 GO:0046348 aminoglycan metabolic process(GO:0006022) aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.2 GO:0019853 L-ascorbic acid metabolic process(GO:0019852) L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.5 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.0 GO:0048533 sporocyte differentiation(GO:0048533)
0.0 0.3 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.1 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.0 0.3 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.3 GO:0010218 response to far red light(GO:0010218)
0.0 0.1 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 0.0 GO:0019740 nitrogen utilization(GO:0019740)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.7 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.6 GO:0009933 meristem structural organization(GO:0009933)
0.0 0.1 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.1 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.4 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.3 GO:0051225 spindle assembly(GO:0051225)
0.0 1.0 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.3 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.2 GO:0071545 phosphorylated carbohydrate dephosphorylation(GO:0046838) inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.4 GO:0035825 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 0.1 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.1 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 0.0 GO:0010117 photoprotection(GO:0010117)
0.0 0.7 GO:0042254 ribosome biogenesis(GO:0042254)
0.0 0.3 GO:0042330 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 1.2 GO:0007623 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.8 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.3 0.8 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.3 1.0 GO:0070505 pollen coat(GO:0070505)
0.3 0.3 GO:0016328 lateral plasma membrane(GO:0016328)
0.3 2.0 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 1.0 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.2 0.7 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.2 0.9 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.2 0.6 GO:0009501 amyloplast(GO:0009501)
0.2 0.6 GO:0005652 nuclear lamina(GO:0005652)
0.2 1.0 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.2 0.6 GO:0044420 extracellular matrix component(GO:0044420)
0.2 0.2 GO:0005905 clathrin-coated pit(GO:0005905)
0.2 0.2 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.2 0.2 GO:0031356 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.2 0.7 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.2 1.3 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.2 0.6 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 0.7 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 1.4 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.4 GO:0032301 MutSalpha complex(GO:0032301)
0.1 2.6 GO:0030686 90S preribosome(GO:0030686)
0.1 4.9 GO:0010319 stromule(GO:0010319)
0.1 0.7 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.5 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.3 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 1.0 GO:0042555 MCM complex(GO:0042555)
0.1 0.6 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.1 3.4 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 0.6 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.1 1.3 GO:0031012 extracellular matrix(GO:0031012)
0.1 12.5 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 1.0 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.1 0.6 GO:0005884 actin filament(GO:0005884)
0.1 1.7 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 9.8 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 2.4 GO:0015934 large ribosomal subunit(GO:0015934)
0.1 0.7 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.4 GO:0000796 condensin complex(GO:0000796)
0.1 0.2 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 2.2 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.1 1.7 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 8.0 GO:0031225 anchored component of membrane(GO:0031225)
0.1 1.3 GO:0016324 apical plasma membrane(GO:0016324)
0.1 1.0 GO:0030125 clathrin vesicle coat(GO:0030125)
0.1 12.3 GO:0009505 plant-type cell wall(GO:0009505)
0.1 0.2 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 0.3 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 0.3 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.4 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 0.3 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.1 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.3 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.1 0.7 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 0.4 GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.1 0.5 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 1.4 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 0.8 GO:0048500 signal recognition particle(GO:0048500)
0.0 0.9 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.8 GO:0044815 DNA packaging complex(GO:0044815)
0.0 0.4 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 18.0 GO:0009579 thylakoid(GO:0009579)
0.0 0.8 GO:0031965 nuclear membrane(GO:0031965)
0.0 0.4 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.4 GO:0009986 cell surface(GO:0009986)
0.0 0.3 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 1.1 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 13.0 GO:0005730 nucleolus(GO:0005730)
0.0 0.6 GO:0055028 cortical microtubule(GO:0055028)
0.0 0.5 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.2 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.8 GO:0005643 nuclear pore(GO:0005643)
0.0 0.4 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.2 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 2.3 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 1.7 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.2 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.4 GO:0005815 microtubule organizing center(GO:0005815)
0.0 0.4 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.5 GO:0090404 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.5 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 1.1 GO:0009528 plastid inner membrane(GO:0009528)
0.0 1.0 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 5.2 GO:0048046 apoplast(GO:0048046)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.1 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.2 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.1 GO:0016461 unconventional myosin complex(GO:0016461)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.2 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 0.6 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 1.6 GO:0099512 microtubule(GO:0005874) supramolecular fiber(GO:0099512) polymeric cytoskeletal fiber(GO:0099513)
0.0 0.1 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 0.2 GO:0010168 ER body(GO:0010168)
0.0 0.1 GO:0030139 endocytic vesicle(GO:0030139)
0.0 4.5 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.7 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.2 GO:0005685 U1 snRNP(GO:0005685)
0.0 2.8 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.0 GO:0098799 outer mitochondrial membrane protein complex(GO:0098799)
0.0 0.6 GO:0016607 nuclear speck(GO:0016607)
0.0 0.2 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.2 GO:0005657 replication fork(GO:0005657)
0.0 0.2 GO:0005840 ribosome(GO:0005840)
0.0 0.2 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.1 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.3 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.7 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.6 3.2 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.6 2.4 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.5 1.4 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.4 1.2 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.4 1.1 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.4 1.4 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.3 1.0 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.3 1.3 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.3 3.5 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.3 0.9 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.3 0.8 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.3 0.8 GO:0016842 amidine-lyase activity(GO:0016842)
0.3 1.0 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.3 0.8 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.2 1.0 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.2 1.0 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 0.7 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.2 1.2 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.2 2.7 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.2 0.7 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.2 0.6 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.2 0.6 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.2 0.4 GO:0016841 ammonia-lyase activity(GO:0016841)
0.2 1.4 GO:0008169 C-methyltransferase activity(GO:0008169)
0.2 0.4 GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.2 0.8 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.2 1.7 GO:0009922 fatty acid elongase activity(GO:0009922)
0.2 0.6 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 0.7 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.2 0.5 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.2 0.9 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.2 0.5 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 1.0 GO:0004312 fatty acid synthase activity(GO:0004312)
0.2 0.9 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.2 0.8 GO:0004072 aspartate kinase activity(GO:0004072)
0.2 1.2 GO:0016273 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.2 0.8 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.2 1.1 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.2 3.2 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.2 1.0 GO:0003913 DNA photolyase activity(GO:0003913)
0.2 0.8 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.2 0.6 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.2 4.9 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.6 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.6 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.1 0.4 GO:0070678 preprotein binding(GO:0070678)
0.1 1.0 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 0.4 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.1 0.8 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.7 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 0.7 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.4 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.1 1.0 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 1.0 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.4 GO:0032405 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.1 1.0 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 0.4 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.1 0.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 0.5 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.6 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 0.6 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 1.5 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.8 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.3 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.1 1.2 GO:0019238 cyclohydrolase activity(GO:0019238)
0.1 0.9 GO:0043495 protein anchor(GO:0043495)
0.1 0.4 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.3 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.4 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 0.5 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.1 0.3 GO:0015377 cation:chloride symporter activity(GO:0015377)
0.1 1.0 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 0.4 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.1 2.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.4 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.1 0.4 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.6 GO:0052655 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.5 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 0.5 GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.1 0.7 GO:0008494 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.1 0.7 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.4 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 0.3 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.1 0.4 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.7 GO:0015210 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.1 0.8 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.9 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.8 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.3 GO:0015245 fatty acid transporter activity(GO:0015245)
0.1 2.3 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.3 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.1 0.4 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.2 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.1 3.5 GO:0019843 rRNA binding(GO:0019843)
0.1 17.4 GO:0003735 structural constituent of ribosome(GO:0003735)
0.1 0.2 GO:0071614 glycerol-3-phosphate O-acyltransferase activity(GO:0004366) linoleic acid epoxygenase activity(GO:0071614)
0.1 0.4 GO:0016675 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 0.4 GO:0004333 fumarate hydratase activity(GO:0004333)
0.1 0.5 GO:0001671 ATPase activator activity(GO:0001671)
0.1 1.1 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 2.0 GO:0008810 cellulase activity(GO:0008810)
0.1 0.2 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.1 0.2 GO:0016672 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.1 0.4 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.5 GO:0080025 phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.1 0.9 GO:0002020 protease binding(GO:0002020)
0.1 0.6 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.5 GO:0051183 vitamin transporter activity(GO:0051183)
0.1 0.3 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 1.7 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 1.7 GO:0016168 chlorophyll binding(GO:0016168)
0.1 0.3 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 1.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 0.9 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.1 0.2 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.2 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.5 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 0.4 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.5 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 2.8 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.1 0.5 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.1 0.9 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 0.3 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.1 0.3 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 0.5 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 3.7 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.1 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.1 0.2 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 1.2 GO:0030276 clathrin binding(GO:0030276)
0.1 0.7 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 0.2 GO:0008061 chitin binding(GO:0008061)
0.1 1.3 GO:0004568 chitinase activity(GO:0004568)
0.1 0.3 GO:0004126 cytidine deaminase activity(GO:0004126)
0.1 0.6 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.5 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.2 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 1.0 GO:0019212 phosphatase inhibitor activity(GO:0019212)
0.0 0.2 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.1 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.0 0.2 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 2.1 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.7 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 1.4 GO:0051087 chaperone binding(GO:0051087)
0.0 1.0 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.9 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.0 1.1 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.3 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 0.3 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.0 0.4 GO:0052736 beta-glucanase activity(GO:0052736)
0.0 0.1 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.3 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.2 GO:0010313 phytochrome binding(GO:0010313)
0.0 0.3 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.4 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 2.5 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.3 GO:0030332 cyclin binding(GO:0030332)
0.0 0.1 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.0 0.2 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.0 0.5 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 0.3 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 1.9 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0030527 structural constituent of chromatin(GO:0030527)
0.0 1.4 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.2 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.0 0.5 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.0 1.3 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.2 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.1 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311) polynucleotide phosphatase activity(GO:0098518)
0.0 0.5 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.6 GO:0030599 pectinesterase activity(GO:0030599)
0.0 2.6 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.2 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.0 2.0 GO:0003697 single-stranded DNA binding(GO:0003697)
0.0 0.5 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.2 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.0 0.6 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.0 0.6 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.4 GO:0016780 phosphotransferase activity, for other substituted phosphate groups(GO:0016780)
0.0 1.4 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.0 0.2 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 2.2 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.3 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.3 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.2 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.5 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.7 GO:0031490 chromatin DNA binding(GO:0031490)
0.0 0.9 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.1 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.9 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.4 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.1 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.2 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 3.1 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 2.2 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.1 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.0 0.5 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.0 0.3 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.2 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 2.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.3 GO:0031545 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.1 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.0 0.1 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.0 0.6 GO:0016597 amino acid binding(GO:0016597)
0.0 2.6 GO:0008017 microtubule binding(GO:0008017)
0.0 0.3 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.3 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.0 0.2 GO:0004532 exoribonuclease activity(GO:0004532) exoribonuclease activity, producing 5'-phosphomonoesters(GO:0016896)
0.0 0.4 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 1.3 GO:0016879 ligase activity, forming carbon-nitrogen bonds(GO:0016879)
0.0 0.1 GO:0004113 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.1 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.2 GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756)
0.0 0.2 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.2 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.1 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.1 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.5 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 0.6 GO:0043021 ribonucleoprotein complex binding(GO:0043021)
0.0 0.2 GO:0015631 tubulin binding(GO:0015631)
0.0 0.2 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.0 2.1 GO:0005507 copper ion binding(GO:0005507)
0.0 0.0 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.0 0.2 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.2 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.2 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 7.7 GO:0044822 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 0.2 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.7 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.0 0.0 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.2 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.4 GO:0004527 exonuclease activity(GO:0004527)
0.0 0.1 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.1 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.4 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.1 GO:0017048 Rho GTPase binding(GO:0017048)
0.0 0.0 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.1 GO:0008198 ferrous iron binding(GO:0008198)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.3 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.1 0.6 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.1 0.7 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.7 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.1 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.1 0.6 PID ATR PATHWAY ATR signaling pathway
0.1 0.1 PID RAS PATHWAY Regulation of Ras family activation
0.0 0.5 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.1 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.0 0.2 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 3.0 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.2 3.9 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.2 0.5 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.2 1.1 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.1 0.7 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.3 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.3 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.2 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.7 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.4 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.0 0.4 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.3 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.2 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.0 0.1 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.1 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.0 0.1 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.0 0.1 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.0 0.1 REACTOME G2 M CHECKPOINTS Genes involved in G2/M Checkpoints