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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G32870

Z-value: 0.77

Transcription factors associated with AT1G32870

Gene Symbol Gene ID Gene Info
AT1G32870
AT1G32870 NAC domain protein 13

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC13arTal_v1_Chr1_+_11911631_119116790.357.1e-02Click!

Activity profile of AT1G32870 motif

Sorted Z-values of AT1G32870 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_162905 1.57 AT3G01420.1
DOX1
Peroxidase superfamily protein
Chr3_+_15983199 1.56 AT3G44300.1
NIT2
nitrilase 2
Chr5_-_4183354 1.40 AT5G13170.1
SAG29
senescence-associated gene 29
Chr1_+_10892445 1.38 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
Chr2_-_18781973 1.34 AT2G45570.1
CYP76C2
cytochrome P450, family 76, subfamily C, polypeptide 2
Chr5_+_1153740 1.24 AT5G04200.1
MC9
metacaspase 9
Chr3_+_10520443 1.23 AT3G28210.1
AT3G28210.2
PMZ
zinc finger (AN1-like) family protein
Chr5_+_16290386 1.20 AT5G40690.1
AT5G40690
histone-lysine N-methyltransferase trithorax-like protein
Chr1_+_27538190 1.15 AT1G73220.1
OCT1
organic cation/carnitine transporter1
Chr4_-_10182264 1.11 AT4G18425.1
AT4G18425
transmembrane protein, putative (DUF679)
Chr4_-_16102196 1.09 AT4G33467.1
AT4G33467.2
AT4G33467
hypothetical protein
Chr1_+_21652988 1.07 AT1G58340.1
ZF14
MATE efflux family protein
Chr3_-_7576623 1.07 AT3G21500.1
AT3G21500.3
AT3G21500.2
DXPS1
1-deoxy-D-xylulose 5-phosphate synthase 1
Chr4_+_10142255 1.06 AT4G18350.1
NCED2
nine-cis-epoxycarotenoid dioxygenase 2
Chr2_-_15419391 1.06 AT2G36780.1
AT2G36780
UDP-Glycosyltransferase superfamily protein
Chr2_-_19291632 1.06 AT2G46950.2
AT2G46950.1
CYP709B2
cytochrome P450, family 709, subfamily B, polypeptide 2
Chr3_+_512220 1.04 AT3G02480.1
AT3G02480
Late embryogenesis abundant protein (LEA) family protein
Chr4_+_15828228 1.03 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr5_-_216773 1.03 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
Chr1_+_6996354 1.03 AT1G20180.2
AT1G20180
transmembrane protein (DUF677)
Chr4_+_15462350 1.03 AT4G31970.1
CYP82C2
cytochrome P450, family 82, subfamily C, polypeptide 2
Chr1_+_6996176 1.01 AT1G20180.1
AT1G20180
transmembrane protein (DUF677)
Chr5_+_21853348 1.01 AT5G53820.1
AT5G53820
Late embryogenesis abundant protein (LEA) family protein
Chr1_+_25765718 1.00 AT1G68620.1
AT1G68620
alpha/beta-Hydrolases superfamily protein
Chr1_-_4633299 0.99 AT1G13520.1
AT1G13520
hypothetical protein (DUF1262)
Chr1_+_5820080 0.99 AT1G17020.1
SRG1
senescence-related gene 1
Chr3_-_3197457 0.98 AT3G10320.1
AT3G10320
Glycosyltransferase family 61 protein
Chr4_+_13275200 0.98 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr5_+_16288754 0.97 AT5G40680.1
AT5G40680
Galactose oxidase/kelch repeat superfamily protein
Chr5_-_6042938 0.95 AT5G18270.2
AT5G18270.1
ANAC087
NAC domain containing protein 87
Chr2_+_18558885 0.94 AT2G44990.2
AT2G44990.3
AT2G44990.1
CCD7
carotenoid cleavage dioxygenase 7
Chr1_-_9131779 0.94 AT1G26390.1
AT1G26390
FAD-binding Berberine family protein
Chr1_-_10356482 0.93 AT1G29640.1
AT1G29640
senescence regulator (Protein of unknown function, DUF584)
Chr4_+_9407611 0.92 AT4G16740.4
AT4G16740.3
AT4G16740.1
TPS03
terpene synthase 03
Chr2_-_13800099 0.91 AT2G32510.1
MAPKKK17
mitogen-activated protein kinase kinase kinase 17
Chr5_-_6338209 0.91 AT5G18980.1
AT5G18980.2
AT5G18980
ARM repeat superfamily protein
Chr1_+_20462940 0.90 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
Chr5_-_896433 0.89 AT5G03550.1
AT5G03550
MATH domain/coiled-coil protein
Chr1_+_10537648 0.89 AT1G30040.2
GA2OX2
gibberellin 2-oxidase
Chr4_+_1464467 0.88 AT4G03320.1
Tic20-IV
translocon at the inner envelope membrane of chloroplasts 20-IV
Chr3_-_16923299 0.87 AT3G46080.1
AT3G46080
C2H2-type zinc finger family protein
Chr5_-_2090430 0.87 AT5G06760.1
LEA4-5
Late Embryogenesis Abundant 4-5
Chr2_+_12600914 0.87 AT2G29350.2
AT2G29350.1
AT2G29350.3
SAG13
senescence-associated gene 13
Chr3_-_20895634 0.87 AT3G56350.1
AT3G56350
Iron/manganese superoxide dismutase family protein
Chr2_-_8447355 0.87 AT2G19500.1
CKX2
cytokinin oxidase 2
Chr1_+_10537457 0.87 AT1G30040.1
GA2OX2
gibberellin 2-oxidase
Chr3_+_1635194 0.86 AT3G05630.1
PLDP2
phospholipase D P2
Chr1_-_10184512 0.85 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
Chr5_-_6337124 0.85 AT5G18980.3
AT5G18980
ARM repeat superfamily protein
Chr4_+_9407768 0.85 AT4G16740.2
TPS03
terpene synthase 03
Chr1_-_28993170 0.84 AT1G77150.1
AT1G77150
Pentatricopeptide repeat (PPR) superfamily protein
Chr5_-_26857086 0.84 AT5G67310.1
CYP81G1
cytochrome P450, family 81, subfamily G, polypeptide 1
Chr4_-_10765781 0.83 AT4G19810.1
AT4G19810.2
ChiC
Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
Chr1_+_5795879 0.83 AT1G16950.1
AT1G16950
transmembrane protein
Chr4_+_5811115 0.83 AT4G09100.1
AT4G09100
RING/U-box superfamily protein
Chr4_+_17592996 0.82 AT4G37420.1
AT4G37420
glycosyltransferase family protein (DUF23)
Chr2_+_6608561 0.81 AT2G15220.1
AT2G15220
Plant basic secretory protein (BSP) family protein
Chr1_+_25041833 0.81 AT1G67070.1
AT1G67070.2
DIN9
Mannose-6-phosphate isomerase, type I
Chr1_-_16789436 0.80 AT1G44130.1
AT1G44130
Eukaryotic aspartyl protease family protein
Chr5_+_19620267 0.80 AT5G48410.4
AT5G48410.3
AT5G48410.2
AT5G48410.1
GLR1.3
glutamate receptor 1.3
Chr4_-_12345652 0.79 AT4G23700.2
CHX17
cation/H+ exchanger 17
Chr4_-_12346051 0.79 AT4G23700.1
CHX17
cation/H+ exchanger 17
Chr4_+_17444315 0.79 AT4G37010.1
CEN2
centrin 2
Chr3_-_21834514 0.78 AT3G59070.1
AT3G59070
Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein
Chr3_+_22716238 0.78 AT3G61390.1
AT3G61390.2
AT3G61390.3
AT3G61390.4
AT3G61390.5
AT3G61390
RING/U-box superfamily protein
Chr5_-_4423095 0.78 AT5G13700.1
PAO1
polyamine oxidase 1
Chr5_-_22481915 0.78 AT5G55490.1
AT5G55490.7
AT5G55490.5
AT5G55490.4
AT5G55490.8
AT5G55490.3
GEX1
gamete expressed protein 1
Chr3_+_9208861 0.78 AT3G25290.1
AT3G25290.2
AT3G25290
Auxin-responsive family protein
Chr4_+_17444129 0.78 AT4G37010.2
CEN2
centrin 2
Chr1_-_24558322 0.77 AT1G65970.1
TPX2
thioredoxin-dependent peroxidase 2
Chr4_-_16344818 0.77 AT4G34131.1
UGT73B3
UDP-glucosyl transferase 73B3
Chr5_+_23967217 0.77 AT5G59430.2
AT5G59430.4
AT5G59430.3
TRP1
telomeric repeat binding protein 1
Chr4_+_14065992 0.76 AT4G28460.1
AT4G28460
transmembrane protein
Chr3_-_1063103 0.76 AT3G04070.2
AT3G04070.1
NAC047
NAC domain containing protein 47
Chr5_+_23967875 0.76 AT5G59430.5
TRP1
telomeric repeat binding protein 1
Chr5_+_23967611 0.76 AT5G59430.1
TRP1
telomeric repeat binding protein 1
Chr1_+_25042135 0.75 AT1G67070.3
DIN9
Mannose-6-phosphate isomerase, type I
Chr1_-_6626217 0.75 AT1G19200.2
AT1G19200
cyclin-dependent kinase, putative (DUF581)
Chr1_-_6625856 0.75 AT1G19200.1
AT1G19200
cyclin-dependent kinase, putative (DUF581)
Chr4_+_285876 0.75 AT4G00700.2
AT4G00700.1
AT4G00700
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr3_+_9195334 0.75 AT3G25250.1
AGC2-1
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr1_+_175706 0.75 AT1G01480.1
ACS2
1-amino-cyclopropane-1-carboxylate synthase 2
Chr1_-_7906969 0.74 AT1G22400.1
UGT85A1
UDP-Glycosyltransferase superfamily protein
Chr3_-_4963569 0.74 AT3G14780.1
AT3G14780
callose synthase
Chr4_-_12853845 0.74 AT4G25000.1
AMY1
alpha-amylase-like protein
Chr2_-_9173490 0.74 AT2G21430.1
AT2G21430
Papain family cysteine protease
Chr3_+_9892791 0.74 AT3G26840.1
PES2
Esterase/lipase/thioesterase family protein
Chr3_-_84901 0.74 AT3G01270.1
AT3G01270
Pectate lyase family protein
Chr4_+_18409846 0.73 AT4G39670.1
AT4G39670
Glycolipid transfer protein (GLTP) family protein
Chr5_+_22090417 0.73 AT5G54400.1
AT5G54400
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_612324 0.72 AT1G02790.1
PGA4
polygalacturonase 4
Chr1_+_22836327 0.72 AT1G61820.3
BGLU46
beta glucosidase 46
Chr2_-_18463533 0.72 AT2G44790.1
UCC2
uclacyanin 2
Chr4_-_16562931 0.72 AT4G34710.2
AT4G34710.1
ADC2
arginine decarboxylase 2
Chr1_-_3029549 0.72 AT1G09380.1
UMAMIT25
nodulin MtN21 /EamA-like transporter family protein
Chr4_+_12461907 0.72 AT4G24000.1
CSLG2
cellulose synthase like G2
Chr2_-_11968712 0.72 AT2G28085.1
AT2G28085
SAUR-like auxin-responsive protein family
Chr5_-_17272298 0.71 AT5G43060.1
RD21B
Granulin repeat cysteine protease family protein
Chr5_-_7054281 0.71 AT5G20830.3
SUS1
sucrose synthase 1
Chr5_+_4805846 0.71 AT5G14860.1
AT5G14860
UDP-Glycosyltransferase superfamily protein
Chr5_-_17881483 0.71 AT5G44380.1
AT5G44380.2
AT5G44380
FAD-binding Berberine family protein
Chr5_-_7054713 0.71 AT5G20830.1
SUS1
sucrose synthase 1
Chr3_+_17624340 0.71 AT3G47780.1
ABCA7
ABC2 homolog 6
Chr2_+_16867293 0.71 AT2G40390.1
AT2G40390
neuronal PAS domain protein
Chr5_+_21943983 0.71 AT5G54070.1
HSFA9
heat shock transcription factor A9
Chr3_-_845096 0.71 AT3G03530.1
NPC4
non-specific phospholipase C4
Chr4_-_386479 0.71 AT4G00900.2
ECA2
ER-type Ca2+-ATPase 2
Chr1_+_22835078 0.71 AT1G61820.1
BGLU46
beta glucosidase 46
Chr5_-_7055398 0.70 AT5G20830.2
SUS1
sucrose synthase 1
Chr3_-_11194897 0.70 AT3G29250.2
AT3G29250.1
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_12463312 0.70 AT4G24000.2
CSLG2
cellulose synthase like G2
Chr4_-_386850 0.70 AT4G00900.1
ECA2
ER-type Ca2+-ATPase 2
Chr2_+_16782366 0.69 AT2G40180.1
PP2C5
phosphatase 2C5
Chr4_-_10227128 0.69 AT4G18550.3
AT4G18550.2
DSEL
alpha/beta-Hydrolases superfamily protein
Chr4_+_14409772 0.69 AT4G29230.1
AT4G29230.2
AT4G29230.3
NAC075
NAC domain containing protein 75
Chr2_-_9037782 0.69 AT2G21060.1
GRP2B
glycine-rich protein 2B
Chr5_-_22481148 0.69 AT5G55490.9
AT5G55490.6
AT5G55490.2
GEX1
gamete expressed protein 1
Chr1_+_176141 0.68 AT1G01480.2
ACS2
1-amino-cyclopropane-1-carboxylate synthase 2
Chr5_-_23289635 0.68 AT5G57510.1
AT5G57510
cotton fiber protein
Chr3_-_19699392 0.67 AT3G53150.1
UGT73D1
UDP-glucosyl transferase 73D1
Chr1_-_8967562 0.67 AT1G25530.1
AT1G25530
Transmembrane amino acid transporter family protein
Chr1_-_8354262 0.67 AT1G23560.1
AT1G23560
OBP32pep, putative (DUF220)
Chr5_-_22237370 0.67 AT5G54730.1
G18F
yeast autophagy 18 F-like protein
Chr2_-_16860779 0.66 AT2G40370.1
LAC5
laccase 5
Chr4_-_9391726 0.66 AT4G16680.2
AT4G16680
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_22236551 0.66 AT5G54730.2
G18F
yeast autophagy 18 F-like protein
Chr1_-_23019494 0.66 AT1G62300.1
WRKY6
WRKY family transcription factor
Chr5_-_8186100 0.66 AT5G24160.3
SQE6
squalene monooxygenase 6
Chr1_+_10244453 0.66 AT1G29290.1
AT1G29290
B-cell lymphoma 6 protein
Chr1_-_5338326 0.66 AT1G15520.1
AT1G15520.2
ABCG40
pleiotropic drug resistance 12
Chr5_-_2079005 0.65 AT5G06720.1
PA2
peroxidase 2
Chr2_+_18624264 0.65 AT2G45170.1
AT2G45170.2
ATG8E
AUTOPHAGY 8E
Chr5_-_8186662 0.64 AT5G24160.2
AT5G24160.1
SQE6
squalene monooxygenase 6
Chr2_-_19315241 0.64 AT2G47000.7
AT2G47000.1
AT2G47000.2
AT2G47000.4
AT2G47000.3
ABCB4
ATP binding cassette subfamily B4
Chr1_+_10169084 0.63 AT1G29100.1
AT1G29100
Heavy metal transport/detoxification superfamily protein
Chr1_-_10720843 0.63 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr3_-_17199363 0.63 AT3G46690.1
AT3G46690
UDP-Glycosyltransferase superfamily protein
Chr5_-_16021916 0.62 AT5G40010.1
AATP1
AAA-ATPase 1
Chr3_+_390720 0.62 AT3G02150.1
AT3G02150.2
PTF1
plastid transcription factor 1
Chr1_-_23429603 0.62 AT1G63180.2
AT1G63180.1
UGE3
UDP-D-glucose/UDP-D-galactose 4-epimerase 3
Chr1_-_8354619 0.62 AT1G23560.2
AT1G23560
OBP32pep, putative (DUF220)
Chr4_-_9390930 0.62 AT4G16680.1
AT4G16680
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_+_14575392 0.62 AT2G34610.1
AT2G34610
cotton fiber protein
Chr4_-_10612135 0.62 AT4G19460.1
AT4G19460
UDP-Glycosyltransferase superfamily protein
Chr1_-_11966280 0.62 AT1G33030.2
AT1G33030.3
AT1G33030.1
AT1G33030
O-methyltransferase family protein
Chr3_-_2498095 0.62 AT3G07820.1
AT3G07820
Pectin lyase-like superfamily protein
Chr1_+_10168717 0.61 AT1G29100.2
AT1G29100
Heavy metal transport/detoxification superfamily protein
Chr3_-_6000447 0.61 AT3G17520.1
AT3G17520
Late embryogenesis abundant protein (LEA) family protein
Chr2_-_19315013 0.61 AT2G47000.5
AT2G47000.6
ABCB4
ATP binding cassette subfamily B4
Chr1_-_5652883 0.61 AT1G16530.1
ASL9
ASYMMETRIC LEAVES 2-like 9
Chr4_+_1306313 0.61 AT4G02940.1
AT4G02940
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Chr2_+_14180978 0.61 AT2G33480.1
AT2G33480.3
NAC041
NAC domain containing protein 41
Chr5_-_4664681 0.61 AT5G14470.1
AT5G14470
GHMP kinase family protein
Chr4_-_2234689 0.60 AT4G04490.1
CRK36
cysteine-rich RLK (RECEPTOR-like protein kinase) 36
Chr1_-_10071108 0.60 AT1G28650.1
AT1G28650
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_26012519 0.60 AT5G65110.2
ACX2
acyl-CoA oxidase 2
Chr1_-_19789029 0.60 AT1G53100.2
AT1G53100.1
AT1G53100
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr2_+_14181186 0.60 AT2G33480.2
NAC041
NAC domain containing protein 41
Chr5_-_26012684 0.60 AT5G65110.1
ACX2
acyl-CoA oxidase 2
Chr4_+_13370951 0.60 AT4G26470.3
AT4G26470.1
AT4G26470.2
AT4G26470
Calcium-binding EF-hand family protein
Chr5_-_157601 0.60 AT5G01380.1
AT5G01380
Homeodomain-like superfamily protein
Chr3_-_18116569 0.60 AT3G48850.1
PHT3%3B2
phosphate transporter 3;2
Chr3_+_19115184 0.59 AT3G51540.2
AT3G51540.1
AT3G51540.3
AT3G51540.4
AT3G51540
mucin-5AC-like protein
Chr2_-_13856297 0.59 AT2G32660.2
RLP22
receptor like protein 22
Chr5_+_18651265 0.59 AT5G45990.2
AT5G45990.1
AT5G45990
crooked neck protein, putative / cell cycle protein
Chr2_+_9840456 0.59 AT2G23110.1
AT2G23110.2
AT2G23110
Late embryogenesis abundant protein, group 6
Chr3_-_9939305 0.58 AT3G26940.1
CDG1
Protein kinase superfamily protein
Chr5_+_3370096 0.58 AT5G10660.1
AT5G10660.3
AT5G10660
calmodulin-binding protein-like protein
Chr1_+_27018158 0.58 AT1G71830.1
SERK1
somatic embryogenesis receptor-like kinase 1
Chr5_-_25089603 0.58 AT5G62480.3
AT5G62480.2
AT5G62480.1
GSTU9
glutathione S-transferase tau 9
Chr5_-_20506354 0.58 AT5G50360.1
AT5G50360
von willebrand factor A domain protein
Chr1_+_11928757 0.58 AT1G32920.1
AT1G32920
hypothetical protein
Chr1_+_480650 0.58 AT1G02390.1
GPAT2
glycerol-3-phosphate acyltransferase 2
Chr2_+_426052 0.57 AT2G01920.1
AT2G01920
ENTH/VHS/GAT family protein
Chr1_-_27475962 0.57 AT1G73040.1
AT1G73040
Mannose-binding lectin superfamily protein
Chr1_+_21345445 0.57 AT1G57630.1
AT1G57630
Toll-Interleukin-Resistance (TIR) domain family protein
Chr1_+_10010124 0.57 AT1G28470.1
NAC010
NAC domain containing protein 10
Chr4_-_18394816 0.56 AT4G39610.1
AT4G39610
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr2_+_8647721 0.56 AT2G20030.1
AT2G20030
RING/U-box superfamily protein
Chr3_-_11195171 0.56 AT3G29250.3
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_25679425 0.56 AT5G64190.2
AT5G64190.1
AT5G64190
neuronal PAS domain protein
Chr2_-_12666113 0.56 AT2G29620.2
AT2G29620.1
AT2G29620.4
AT2G29620.3
AT2G29620
dentin sialophosphoprotein
Chr2_+_9290705 0.56 AT2G21780.1
AT2G21780
hypothetical protein
Chr2_-_13856112 0.56 AT2G32660.1
RLP22
receptor like protein 22
Chr4_+_10818128 0.56 AT4G19970.1
AT4G19970
nucleotide-diphospho-sugar transferase family protein
Chr4_+_10022205 0.56 AT4G18050.1
ABCB9
P-glycoprotein 9
Chr3_-_1548679 0.56 AT3G05390.1
AT3G05390
S-adenosyl-L-methionine-dependent methyltransferase
Chr4_+_11958289 0.56 AT4G22758.2
AT4G22758
PPR containing protein
Chr1_-_8368381 0.55 AT1G23640.1
AT1G23640
OBP32pep protein
Chr1_-_9143336 0.55 AT1G26420.1
AT1G26420
FAD-binding Berberine family protein
Chr4_+_11958128 0.55 AT4G22758.1
AT4G22758
PPR containing protein
Chr5_+_5710910 0.55 AT5G17330.1
GAD
glutamate decarboxylase
Chr1_+_26939567 0.55 AT1G71530.2
AT1G71530.1
AT1G71530
Protein kinase superfamily protein
Chr4_+_10021786 0.54 AT4G18050.2
ABCB9
P-glycoprotein 9
Chr3_+_1006780 0.54 AT3G03910.1
AT3G03910.2
GDH3
glutamate dehydrogenase 3
Chr1_+_28975255 0.54 AT1G77120.1
ADH1
alcohol dehydrogenase 1
Chr1_+_6508797 0.54 AT1G18860.1
WRKY61
WRKY DNA-binding protein 61
Chr1_-_18477643 0.54 AT1G49900.1
AT1G49900
C2H2 type zinc finger transcription factor family
Chr5_-_4952777 0.54 AT5G15250.1
AT5G15250.2
FTSH6
FTSH protease 6
Chr1_+_8350728 0.54 AT1G23550.1
SRO2
similar to RCD one 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G32870

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.6 3.4 GO:0009413 response to flooding(GO:0009413)
0.5 1.6 GO:0007099 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.5 1.6 GO:0006056 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.4 1.6 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.4 1.1 GO:0015696 ammonium transport(GO:0015696)
0.4 1.5 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.3 2.2 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.3 1.1 GO:0080168 abscisic acid transport(GO:0080168)
0.3 0.8 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.2 2.4 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.2 1.2 GO:0060919 auxin influx(GO:0060919)
0.2 1.4 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.2 1.2 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.2 0.7 GO:0002215 defense response to nematode(GO:0002215)
0.2 1.9 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.2 1.2 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.2 1.2 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.2 0.7 GO:0033306 phytol metabolic process(GO:0033306)
0.2 0.7 GO:0006527 arginine catabolic process(GO:0006527)
0.2 0.7 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.2 1.1 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.2 1.1 GO:0090059 protoxylem development(GO:0090059)
0.1 1.5 GO:1902025 nitrate import(GO:1902025)
0.1 0.6 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 0.4 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.1 0.7 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.1 0.8 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.4 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.1 0.5 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.1 0.6 GO:0046208 spermine catabolic process(GO:0046208)
0.1 0.5 GO:0010185 response to humidity(GO:0009270) regulation of cellular defense response(GO:0010185)
0.1 0.5 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.1 0.7 GO:0008300 isoprenoid catabolic process(GO:0008300) sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.3 GO:1903862 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.1 0.3 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.1 0.4 GO:0010351 lithium ion transport(GO:0010351)
0.1 0.1 GO:0055064 chloride ion homeostasis(GO:0055064)
0.1 0.4 GO:0045332 phospholipid translocation(GO:0045332)
0.1 0.3 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.1 0.5 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.3 GO:0009945 radial axis specification(GO:0009945)
0.1 0.5 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 1.7 GO:0080027 response to herbivore(GO:0080027)
0.1 0.4 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 0.3 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.1 0.6 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.2 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.2 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.1 0.5 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 0.5 GO:0051014 actin filament severing(GO:0051014)
0.1 0.7 GO:0010230 alternative respiration(GO:0010230)
0.1 0.4 GO:0060151 peroxisome localization(GO:0060151)
0.1 1.4 GO:0015770 sucrose transport(GO:0015770)
0.1 0.4 GO:0006116 NADH oxidation(GO:0006116)
0.1 0.6 GO:0006821 chloride transport(GO:0006821)
0.1 1.8 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 0.4 GO:0019740 regulation of nitrogen utilization(GO:0006808) nitrogen utilization(GO:0019740)
0.1 0.2 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.3 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.1 0.5 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.2 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.2 GO:0043181 vacuolar sequestering(GO:0043181)
0.1 0.2 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.1 0.5 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.6 GO:0097437 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.1 0.6 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.5 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.8 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.1 0.5 GO:0045226 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.1 0.5 GO:0006522 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 1.3 GO:0010227 floral organ abscission(GO:0010227)
0.1 0.1 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.7 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.1 1.2 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.1 0.9 GO:0010440 stomatal lineage progression(GO:0010440)
0.1 0.4 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.1 0.3 GO:1990118 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.1 0.5 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.1 0.2 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0 0.7 GO:1901072 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.8 GO:0006826 iron ion transport(GO:0006826)
0.0 0.1 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.0 0.5 GO:0010098 suspensor development(GO:0010098)
0.0 0.9 GO:0010039 response to iron ion(GO:0010039)
0.0 0.9 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.7 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.2 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.0 0.1 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.0 0.2 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.0 2.3 GO:0006874 cellular calcium ion homeostasis(GO:0006874)
0.0 0.5 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 1.1 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.1 GO:0080152 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.0 0.3 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.0 0.2 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.0 0.2 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.0 0.2 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 2.0 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.2 GO:0016137 glycoside metabolic process(GO:0016137)
0.0 0.2 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.0 0.7 GO:0046688 response to copper ion(GO:0046688)
0.0 0.2 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.2 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.0 8.5 GO:0071456 cellular response to decreased oxygen levels(GO:0036294) cellular response to oxygen levels(GO:0071453) cellular response to hypoxia(GO:0071456)
0.0 0.3 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.2 GO:0009558 embryo sac cellularization(GO:0009558)
0.0 0.1 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.0 0.1 GO:0048478 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.0 0.0 GO:0051569 regulation of histone H3-K4 methylation(GO:0051569)
0.0 0.1 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 0.1 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.2 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.0 1.8 GO:0072666 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.0 0.8 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.2 GO:0009099 valine biosynthetic process(GO:0009099)
0.0 0.1 GO:0030320 cellular monovalent inorganic anion homeostasis(GO:0030320) cellular divalent inorganic anion homeostasis(GO:0072501)
0.0 0.3 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.5 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 0.8 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 1.3 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.6 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.0 0.2 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.3 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.3 GO:0044375 regulation of peroxisome size(GO:0044375)
0.0 0.1 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.0 0.2 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 0.6 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
0.0 0.2 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.0 0.0 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.0 0.9 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.4 GO:0006573 valine metabolic process(GO:0006573)
0.0 0.1 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.7 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 1.5 GO:0009744 response to sucrose(GO:0009744)
0.0 0.1 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538) 5-carbamoylmethyl uridine residue modification(GO:0080178)
0.0 0.5 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.5 GO:0009395 phospholipid catabolic process(GO:0009395)
0.0 0.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.1 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.6 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.3 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0 0.3 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 1.1 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.2 GO:0006825 copper ion transport(GO:0006825)
0.0 0.2 GO:0019320 hexose catabolic process(GO:0019320)
0.0 0.1 GO:1901656 glycoside transport(GO:1901656)
0.0 0.3 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.4 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.0 0.3 GO:0048766 root hair initiation(GO:0048766)
0.0 0.1 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.0 0.2 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.3 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.5 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 0.7 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.0 0.5 GO:0035265 organ growth(GO:0035265)
0.0 0.7 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.0 0.2 GO:0052317 toxin biosynthetic process(GO:0009403) indole phytoalexin biosynthetic process(GO:0009700) camalexin biosynthetic process(GO:0010120) indole phytoalexin metabolic process(GO:0046217) phytoalexin metabolic process(GO:0052314) phytoalexin biosynthetic process(GO:0052315) camalexin metabolic process(GO:0052317)
0.0 0.2 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.0 0.2 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 1.0 GO:0042538 hyperosmotic salinity response(GO:0042538)
0.0 0.7 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789) positive regulation of response to alcohol(GO:1901421)
0.0 0.2 GO:0070131 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.0 2.3 GO:0007568 aging(GO:0007568)
0.0 0.1 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.0 0.1 GO:0042908 xenobiotic transport(GO:0042908)
0.0 0.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.2 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.1 GO:0010071 root meristem specification(GO:0010071)
0.0 0.1 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.1 GO:0019058 viral life cycle(GO:0019058) viral genome replication(GO:0019079)
0.0 0.7 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.2 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.0 0.3 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.1 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.4 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.1 GO:0032877 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.0 0.1 GO:0080117 secondary growth(GO:0080117)
0.0 0.3 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.4 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 0.4 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.9 GO:0009624 response to nematode(GO:0009624)
0.0 0.3 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.0 0.3 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.2 GO:0018208 peptidyl-proline modification(GO:0018208)
0.0 0.3 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.1 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.0 0.1 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.2 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.2 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.0 0.1 GO:0009808 lignin metabolic process(GO:0009808)
0.0 0.5 GO:0018393 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 1.7 GO:0009553 embryo sac development(GO:0009553)
0.0 0.3 GO:0099518 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.0 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.5 GO:0009631 cold acclimation(GO:0009631)
0.0 0.1 GO:0010018 far-red light signaling pathway(GO:0010018)
0.0 0.0 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.0 0.1 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0005813 centrosome(GO:0005813) centriole(GO:0005814)
0.3 1.6 GO:0005776 autophagosome(GO:0005776)
0.1 0.5 GO:0070505 pollen coat(GO:0070505)
0.1 1.1 GO:0017119 Golgi transport complex(GO:0017119)
0.1 2.3 GO:0031965 nuclear membrane(GO:0031965)
0.1 0.3 GO:0002178 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.1 0.4 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 0.6 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 0.4 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.1 0.4 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 1.4 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 0.2 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.7 GO:0005880 nuclear microtubule(GO:0005880)
0.1 0.7 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.2 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.0 0.2 GO:0030141 secretory granule(GO:0030141)
0.0 0.5 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.3 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 0.3 GO:0005884 actin filament(GO:0005884)
0.0 0.1 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 0.3 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.8 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.3 GO:0008278 cohesin complex(GO:0008278)
0.0 0.2 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.1 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.0 2.7 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.6 GO:0090404 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 1.6 GO:0005770 late endosome(GO:0005770)
0.0 1.3 GO:0010008 endosome membrane(GO:0010008)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.2 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 0.3 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.4 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 1.2 GO:0090406 pollen tube(GO:0090406)
0.0 0.3 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0 0.3 GO:0005769 early endosome(GO:0005769)
0.0 0.2 GO:0089701 commitment complex(GO:0000243) U2AF(GO:0089701)
0.0 0.8 GO:0005764 lysosome(GO:0005764)
0.0 0.3 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 1.3 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.1 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.3 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 0.3 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.1 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 1.9 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.1 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.2 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.8 GO:0009524 phragmoplast(GO:0009524)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 1.3 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.1 GO:0005839 proteasome core complex(GO:0005839) proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.1 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.2 GO:0000145 exocyst(GO:0000145)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.5 1.6 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.4 1.8 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.4 1.1 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.4 3.4 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.4 1.1 GO:0050502 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.4 1.4 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.4 1.1 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.3 1.3 GO:0004556 alpha-amylase activity(GO:0004556)
0.3 1.9 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.3 2.3 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.3 1.1 GO:0052596 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.3 0.8 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.2 1.0 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.2 1.1 GO:0008131 primary amine oxidase activity(GO:0008131)
0.2 0.7 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.2 0.2 GO:0030620 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.2 1.5 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.2 2.1 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 1.5 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.2 0.7 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.2 2.0 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.2 2.0 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.2 0.5 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.2 0.5 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.2 1.2 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 2.4 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.7 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 1.6 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 0.4 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.1 0.4 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.1 0.9 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.1 0.7 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.3 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.1 1.5 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.1 0.3 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.1 0.6 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 0.4 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.8 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.4 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.1 0.7 GO:0009916 alternative oxidase activity(GO:0009916)
0.1 0.2 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.1 0.9 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.2 GO:0016504 peptidase activator activity(GO:0016504)
0.1 0.2 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.5 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 1.1 GO:0019209 kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.1 0.3 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 1.4 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 0.5 GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity(GO:0004021) alanine-oxo-acid transaminase activity(GO:0047635)
0.1 0.4 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 0.3 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 0.7 GO:0008865 fructokinase activity(GO:0008865)
0.1 0.7 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.1 0.9 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 0.4 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 0.4 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 1.0 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 0.9 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 0.3 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.1 2.2 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.1 1.0 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.1 0.4 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 0.4 GO:0016408 C-acyltransferase activity(GO:0016408)
0.1 0.6 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 1.4 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.1 1.0 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 1.3 GO:0004568 chitinase activity(GO:0004568)
0.1 0.2 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 0.3 GO:0003680 AT DNA binding(GO:0003680)
0.1 1.3 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.2 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.8 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.3 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.1 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.2 GO:0047714 galactolipase activity(GO:0047714)
0.0 0.1 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.0 0.6 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.0 0.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.2 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.8 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.7 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.2 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.4 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.3 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.2 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.0 1.4 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.3 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.2 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.0 0.5 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.4 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.0 0.1 GO:0036310 annealing helicase activity(GO:0036310)
0.0 0.3 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.1 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 0.1 GO:0000992 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.0 0.3 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 2.0 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.3 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.2 GO:0016531 copper chaperone activity(GO:0016531)
0.0 0.2 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.2 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 1.0 GO:0005179 hormone activity(GO:0005179)
0.0 0.7 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.3 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.1 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.0 0.2 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.1 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0 0.7 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 1.0 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.3 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.0 0.4 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.7 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.1 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.7 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.1 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.0 0.1 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.0 0.3 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.1 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.2 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.1 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.0 0.2 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.0 0.2 GO:0008494 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.8 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.0 2.7 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.0 1.8 GO:0016684 peroxidase activity(GO:0004601) oxidoreductase activity, acting on peroxide as acceptor(GO:0016684)
0.0 1.6 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.5 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 0.1 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.3 GO:0016307 phosphatidylinositol phosphate kinase activity(GO:0016307) 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.1 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.0 0.9 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295)
0.0 0.1 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 0.8 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.1 GO:0046870 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.0 0.2 GO:0080043 quercetin 3-O-glucosyltransferase activity(GO:0080043)
0.0 0.1 GO:0004352 glutamate dehydrogenase (NAD+) activity(GO:0004352)
0.0 0.1 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.0 0.3 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.1 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.2 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.2 GO:0019903 protein phosphatase binding(GO:0019903)
0.0 0.2 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.0 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.0 0.2 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 0.1 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.2 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.3 GO:0016838 carbon-oxygen lyase activity, acting on phosphates(GO:0016838)
0.0 0.3 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.4 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.9 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.2 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.2 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.2 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.1 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.1 GO:0035198 miRNA binding(GO:0035198)
0.0 0.7 GO:0051015 actin filament binding(GO:0051015)
0.0 0.5 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 2.1 GO:0043492 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0 0.1 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 1.4 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.4 GO:0003779 actin binding(GO:0003779)
0.0 0.1 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 0.0 GO:0008192 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.0 0.2 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.6 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.0 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.0 0.4 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.1 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 PID AURORA A PATHWAY Aurora A signaling
0.1 0.3 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.1 0.3 SIG CHEMOTAXIS Genes related to chemotaxis
0.0 0.1 PID RAS PATHWAY Regulation of Ras family activation
0.0 0.1 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.1 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.6 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.2 0.9 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.1 1.3 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.1 0.4 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.2 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.3 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.6 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.1 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 0.1 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.0 0.2 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.0 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import