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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G32770

Z-value: 0.94

Transcription factors associated with AT1G32770

Gene Symbol Gene ID Gene Info
AT1G32770
AT1G32770 NAC domain containing protein 12

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC012arTal_v1_Chr1_-_11867154_11867154-0.096.3e-01Click!

Activity profile of AT1G32770 motif

Sorted Z-values of AT1G32770 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_16810482 4.14 AT4G35350.2
AT4G35350.1
XCP1
xylem cysteine peptidase 1
Chr1_+_7252111 4.08 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr1_+_18517586 2.57 AT1G50010.1
TUA2
tubulin alpha-2 chain
Chr3_-_5777841 2.11 AT3G16920.1
CTL2
chitinase-like protein
Chr3_-_5778052 1.91 AT3G16920.2
CTL2
chitinase-like protein
Chr1_+_8327066 1.72 AT1G23460.1
AT1G23460
Pectin lyase-like superfamily protein
Chr1_+_8326747 1.64 AT1G23460.2
AT1G23460
Pectin lyase-like superfamily protein
Chr2_-_12338836 1.59 AT2G28760.3
AT2G28760.1
AT2G28760.4
UXS6
UDP-XYL synthase 6
Chr5_-_23917873 1.36 AT5G59290.3
AT5G59290.2
UXS3
UDP-glucuronic acid decarboxylase 3
Chr1_-_9293862 1.31 AT1G26820.1
RNS3
ribonuclease 3
Chr5_-_23918266 1.29 AT5G59290.1
AT5G59290.4
UXS3
UDP-glucuronic acid decarboxylase 3
Chr5_+_1153740 1.09 AT5G04200.1
MC9
metacaspase 9
Chr2_-_12339217 0.98 AT2G28760.2
UXS6
UDP-XYL synthase 6
Chr1_+_24677121 0.93 AT1G66230.1
MYB20
myb domain protein 20
Chr1_+_23337167 0.90 AT1G62990.1
KNAT7
homeobox knotted-like protein
Chr5_-_13238884 0.90 AT5G34940.2
GUS3
glucuronidase 3
Chr4_+_14082660 0.86 AT4G28500.1
NAC073
NAC domain containing protein 73
Chr1_-_24929054 0.85 AT1G66810.3
AT1G66810.2
AT1G66810
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_-_13238718 0.85 AT5G34940.3
GUS3
glucuronidase 3
Chr1_+_10010124 0.78 AT1G28470.1
NAC010
NAC domain containing protein 10
Chr5_+_5438165 0.73 AT5G16600.1
MYB43
myb domain protein 43
Chr5_-_13238457 0.72 AT5G34940.1
GUS3
glucuronidase 3
Chr1_-_24928803 0.71 AT1G66810.1
AT1G66810
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr1_-_23721774 0.69 AT1G63910.1
AtMYB103
myb domain protein 103
Chr5_-_13237662 0.67 AT5G34940.4
GUS3
glucuronidase 3
Chr1_-_26568871 0.62 AT1G70500.1
AT1G70500
Pectin lyase-like superfamily protein
Chr1_-_11867154 0.59 AT1G32770.1
NAC012
NAC domain containing protein 12
Chr3_-_2578276 0.45 AT3G08500.1
MYB83
myb domain protein 83
Chr4_-_16096774 0.39 AT4G33450.1
MYB69
myb domain protein 69
Chr2_+_13841180 0.25 AT2G32620.4
CSLB02
cellulose synthase-like B
Chr2_+_13840687 0.25 AT2G32620.2
AT2G32620.1
AT2G32620.3
CSLB02
cellulose synthase-like B
Chr2_+_13836117 0.15 AT2G32610.1
CSLB01
cellulose synthase-like B1
Chr5_-_4065075 0.15 AT5G12870.1
MYB46
myb domain protein 46
Chr4_+_7324756 0.15 AT4G12350.1
MYB42
myb domain protein 42
Chr1_-_9531489 0.09 AT1G27440.1
GUT2
Exostosin family protein
Chr1_+_27601593 0.06 AT1G73410.1
AT1G73410.2
MYB54
myb domain protein 54
Chr5_-_25635789 0.00 AT5G64060.1
NAC103
NAC domain containing protein 103

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G32770

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 8.2 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.6 5.2 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.3 4.0 GO:0006026 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.2 2.5 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.1 3.5 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.1 0.6 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.6 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 1.3 GO:0006401 RNA catabolic process(GO:0006401)
0.0 2.6 GO:0007017 microtubule-based process(GO:0007017)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.6 GO:0045298 tubulin complex(GO:0045298)
0.2 8.2 GO:0005764 lysosome(GO:0005764)
0.0 3.1 GO:0009505 plant-type cell wall(GO:0009505)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 5.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.4 3.1 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.3 1.3 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.2 4.0 GO:0004568 chitinase activity(GO:0004568)
0.1 7.5 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 2.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 4.0 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.1 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517) glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0 0.6 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 1.1 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.0 2.2 GO:0000987 core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)