ISMARA results: AT1G32640

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G32640

Z-value: 0.29

Transcription factors associated with AT1G32640

Gene Symbol	Gene ID	Gene Info
AT1G32640 TAIR	AT1G32640	Basic helix-loop-helix (bHLH) DNA-binding family protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
MYC2	arTal_v1_Chr1_-_11801407_11801407	-0.62	3.9e-04	Click!

Activity profile of AT1G32640 motif

Sorted Z-values of AT1G32640 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr1_-_25049424_25049424 Show fit	2.51	AT1G67090.2	RBCS1A TAIR Show fit	ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr1_-_25049667_25049667 Show fit	2.51	AT1G67090.1	RBCS1A TAIR Show fit	ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr1_+_10477885_10477885 Show fit	2.09	AT1G29930.1	CAB1 TAIR Show fit	chlorophyll A/B binding protein 1
arTal_v1_Chr5_-_8916856_8916856 Show fit	2.05	AT5G25610.1	RD22 TAIR Show fit	BURP domain-containing protein

Showing 1 to 4 of 4 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G32640

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	5.0	GO:0015979	photosynthesis(GO:0015979)
0.1	2.1	GO:0009768	photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1	2.0	GO:0009269	response to desiccation(GO:0009269)

Showing 1 to 3 of 3 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	5.0	GO:0031977	thylakoid lumen(GO:0031977)
0.0	2.1	GO:0010287	plastoglobule(GO:0010287)

Showing 1 to 2 of 2 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.8	5.0	GO:0016984	ribulose-bisphosphate carboxylase activity(GO:0016984)
0.1	2.1	GO:0016168	chlorophyll binding(GO:0016168)
0.0	2.0	GO:0045735	nutrient reservoir activity(GO:0045735)

Showing 1 to 3 of 3 entries

Results for AT1G32640

Z-value: 0.29

Transcription factors associated with AT1G32640

Activity-expression correlation:

Activity profile of AT1G32640 motif

Sorted Z-values of AT1G32640 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G32640

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: