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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G28370

Z-value: 1.26

Transcription factors associated with AT1G28370

Gene Symbol Gene ID Gene Info
AT1G28370
AT1G28370 ERF domain protein 11

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF11arTal_v1_Chr1_-_9956960_99569800.803.6e-07Click!

Activity profile of AT1G28370 motif

Sorted Z-values of AT1G28370 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_+_18613239 8.60 AT5G45890.1
SAG12
senescence-associated gene 12
Chr1_+_30150897 6.11 AT1G80160.3
AT1G80160.1
AT1G80160.2
GLYI7
Lactoylglutathione lyase / glyoxalase I family protein
Chr3_+_22935510 5.62 AT3G61930.1
AT3G61930
hypothetical protein
Chr3_-_20769324 5.57 AT3G55970.2
AT3G55970.1
JRG21
jasmonate-regulated gene 21
Chr5_+_3358787 5.44 AT5G10625.1
AT5G10625
flowering-promoting factor-like protein
Chr2_+_18641563 5.38 AT2G45210.1
SAUR36
SAUR-like auxin-responsive protein family
Chr4_+_15828228 5.22 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr3_+_9208861 4.96 AT3G25290.1
AT3G25290.2
AT3G25290
Auxin-responsive family protein
Chr4_-_7026224 4.51 AT4G11650.1
OSM34
osmotin 34
Chr5_-_8659352 4.48 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
Chr3_-_16923299 4.47 AT3G46080.1
AT3G46080
C2H2-type zinc finger family protein
Chr2_+_10906460 4.38 AT2G25625.2
AT2G25625
histone deacetylase-like protein
Chr1_-_10356482 4.36 AT1G29640.1
AT1G29640
senescence regulator (Protein of unknown function, DUF584)
Chr2_+_13581534 4.35 AT2G31945.1
AT2G31945
transmembrane protein
Chr1_-_460696 4.30 AT1G02310.1
AT1G02310.2
MAN1
Glycosyl hydrolase superfamily protein
Chr2_+_10906215 4.30 AT2G25625.1
AT2G25625
histone deacetylase-like protein
Chr1_+_5290747 4.28 AT1G15380.2
GLYI4
Lactoylglutathione lyase / glyoxalase I family protein
Chr5_+_3239617 4.22 AT5G10300.2
MES5
methyl esterase 5
Chr5_-_26857086 4.22 AT5G67310.1
CYP81G1
cytochrome P450, family 81, subfamily G, polypeptide 1
Chr3_-_23410360 4.22 AT3G63380.1
AT3G63380
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr3_+_9892791 4.19 AT3G26840.1
PES2
Esterase/lipase/thioesterase family protein
Chr1_+_5290582 4.18 AT1G15380.1
GLYI4
Lactoylglutathione lyase / glyoxalase I family protein
Chr3_-_2699257 4.18 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr3_-_4657723 4.17 AT3G14060.1
AT3G14060
hypothetical protein
Chr5_+_3239455 4.16 AT5G10300.1
MES5
methyl esterase 5
Chr3_-_2699420 4.09 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr2_-_18077517 4.07 AT2G43570.1
CHI
chitinase
Chr5_-_23896702 3.96 AT5G59220.2
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
Chr5_-_23896939 3.90 AT5G59220.1
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
Chr2_+_17251819 3.78 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_17597110 3.78 AT4G37430.1
CYP91A2
cytochrome P450, family 91, subfamily A, polypeptide 2
Chr3_+_22552560 3.73 AT3G60966.1
AT3G60966
RING/U-box superfamily protein
Chr1_-_27755297 3.71 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr2_+_18558885 3.68 AT2G44990.2
AT2G44990.3
AT2G44990.1
CCD7
carotenoid cleavage dioxygenase 7
Chr1_+_24763941 3.65 AT1G66390.1
MYB90
myb domain protein 90
Chr3_-_7999552 3.64 AT3G22560.1
AT3G22560
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr4_-_16344818 3.64 AT4G34131.1
UGT73B3
UDP-glucosyl transferase 73B3
Chr5_-_19060121 3.61 AT5G46950.1
AT5G46950
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr4_+_10398857 3.55 AT4G18980.1
AtS40-3
AtS40-3
Chr2_+_18577500 3.53 AT2G45040.1
AT2G45040
Matrixin family protein
Chr4_+_18409846 3.53 AT4G39670.1
AT4G39670
Glycolipid transfer protein (GLTP) family protein
Chr1_+_3066674 3.50 AT1G09500.1
AT1G09500.2
AT1G09500.3
AT1G09500
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_16014991 3.50 AT2G38240.1
AT2G38240
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_-_1046993 3.49 AT4G02380.2
AT4G02380.1
AT4G02380.3
SAG21
senescence-associated gene 21
Chr3_-_19643276 3.47 AT3G52970.1
AT3G52970.2
CYP76G1
cytochrome P450, family 76, subfamily G, polypeptide 1
Chr5_+_18390942 3.46 AT5G45380.1
DUR3
urea-proton symporter DEGRADATION OF UREA 3 (DUR3)
Chr5_+_4271730 3.45 AT5G13330.1
Rap2.6L
related to AP2 6l
Chr1_-_23460884 3.43 AT1G63245.1
CLE14
CLAVATA3/ESR-RELATED 14
Chr3_+_19089026 3.40 AT3G51440.1
AT3G51440
Calcium-dependent phosphotriesterase superfamily protein
Chr3_-_1055196 3.40 AT3G04060.1
NAC046
NAC domain containing protein 46
Chr3_-_11194897 3.35 AT3G29250.2
AT3G29250.1
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_12871984 3.35 AT2G30140.1
AT2G30140.2
UGT87A2
UDP-Glycosyltransferase superfamily protein
Chr3_+_18634546 3.35 AT3G50260.1
CEJ1
cooperatively regulated by ethylene and jasmonate 1
Chr5_-_17994584 3.32 AT5G44610.3
AT5G44610.2
AT5G44610.1
MAP18
microtubule-associated protein 18
Chr5_-_23281271 3.31 AT5G57480.1
AT5G57480
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_1469541 3.29 AT1G05100.1
MAPKKK18
mitogen-activated protein kinase kinase kinase 18
Chr3_-_18241341 3.26 AT3G49210.2
AT3G49210
O-acyltransferase (WSD1-like) family protein
Chr1_-_5338326 3.25 AT1G15520.1
AT1G15520.2
ABCG40
pleiotropic drug resistance 12
Chr1_-_7534927 3.24 AT1G21520.1
AT1G21520
hypothetical protein
Chr3_-_18241524 3.22 AT3G49210.1
AT3G49210
O-acyltransferase (WSD1-like) family protein
Chr1_+_6100964 3.19 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr1_+_3288087 3.18 AT1G10070.3
AT1G10070.2
AT1G10070.1
BCAT-2
branched-chain amino acid transaminase 2
Chr4_+_10818128 3.17 AT4G19970.1
AT4G19970
nucleotide-diphospho-sugar transferase family protein
Chr2_-_19291632 3.15 AT2G46950.2
AT2G46950.1
CYP709B2
cytochrome P450, family 709, subfamily B, polypeptide 2
Chr3_-_826585 3.14 AT3G03470.1
CYP89A9
cytochrome P450, family 87, subfamily A, polypeptide 9
Chr2_-_9858778 3.10 AT2G23150.1
NRAMP3
natural resistance-associated macrophage protein 3
Chr3_-_8119490 3.10 AT3G22910.1
AT3G22910
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr1_-_23019494 3.09 AT1G62300.1
WRKY6
WRKY family transcription factor
Chr1_+_6515373 3.08 AT1G18870.1
AT1G18870.3
ICS2
isochorismate synthase 2
Chr1_+_26651840 3.06 AT1G70690.1
HWI1
Receptor-like protein kinase-related family protein
Chr1_+_4416315 3.06 AT1G12940.1
NRT2.5
nitrate transporter2.5
Chr1_-_17706460 3.05 AT1G48000.1
MYB112
myb domain protein 112
Chr2_-_11295918 3.03 AT2G26560.1
PLA2A
phospholipase A 2A
Chr4_-_10765781 3.02 AT4G19810.1
AT4G19810.2
ChiC
Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
Chr2_-_275002 3.00 AT2G01610.1
AT2G01610
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_-_18375784 3.00 AT3G49580.3
AT3G49580.2
LSU1
response to low sulfur 1
Chr2_-_18463533 2.99 AT2G44790.1
UCC2
uclacyanin 2
Chr1_+_28177670 2.98 AT1G75040.1
PR5
pathogenesis-related protein 5
Chr1_-_1011145 2.98 AT1G03940.1
AT1G03940
HXXXD-type acyl-transferase family protein
Chr3_+_9887917 2.97 AT3G26830.1
PAD3
Cytochrome P450 superfamily protein
Chr1_-_6101983 2.91 AT1G17744.1
AT1G17744
hypothetical protein
Chr5_+_9038860 2.91 AT5G25910.1
RLP52
receptor like protein 52
Chr1_+_28291698 2.87 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
Chr2_-_8850111 2.87 AT2G20560.1
AT2G20560
DNAJ heat shock family protein
Chr1_+_6508797 2.86 AT1G18860.1
WRKY61
WRKY DNA-binding protein 61
Chr5_+_26772644 2.84 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
Chr2_+_1175581 2.84 AT2G03850.1
AT2G03850
Late embryogenesis abundant protein (LEA) family protein
Chr1_-_5645443 2.84 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr1_-_18124289 2.83 AT1G49000.1
AT1G49000
transmembrane protein
Chr2_+_16997078 2.83 AT2G40740.3
AT2G40740.2
AT2G40740.1
WRKY55
WRKY DNA-binding protein 55
Chr3_-_18375940 2.83 AT3G49580.1
LSU1
response to low sulfur 1
Chr1_+_8164959 2.82 AT1G23040.3
AT1G23040.2
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr5_-_26096114 2.82 AT5G65300.1
AT5G65300
hypothetical protein
Chr3_-_20361560 2.80 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
Chr3_+_1635194 2.79 AT3G05630.1
PLDP2
phospholipase D P2
Chr5_-_2652535 2.79 AT5G08240.1
AT5G08240
transmembrane protein
Chr2_+_14685170 2.79 AT2G34810.1
AT2G34810
FAD-binding Berberine family protein
Chr5_+_2938193 2.78 AT5G09440.1
EXL4
EXORDIUM like 4
Chr3_-_21293158 2.78 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
Chr4_-_16102196 2.77 AT4G33467.1
AT4G33467.2
AT4G33467
hypothetical protein
Chr5_-_3405571 2.76 AT5G10770.1
AT5G10770
Eukaryotic aspartyl protease family protein
Chr5_-_26531176 2.74 AT5G66440.1
AT5G66440
tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Chr5_-_16943820 2.74 AT5G42380.1
CML37
calmodulin like 37
Chr3_-_11400332 2.74 AT3G29590.1
AT5MAT
HXXXD-type acyl-transferase family protein
Chr1_-_3323735 2.74 AT1G10140.1
AT1G10140
Uncharacterized conserved protein UCP031279
Chr4_+_7239200 2.72 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
Chr3_-_2651101 2.70 AT3G08720.4
AT3G08720.3
AT3G08720.2
AT3G08720.1
S6K2
serine/threonine protein kinase 2
Chr2_-_13929763 2.69 AT2G32830.1
PHT1%3B5
phosphate transporter 1;5
Chr3_+_4036945 2.67 AT3G12700.1
AT3G12700.3
AT3G12700.2
NANA
Eukaryotic aspartyl protease family protein
Chr2_+_17639001 2.67 AT2G42350.1
AT2G42350
RING/U-box superfamily protein
Chr1_+_8164782 2.65 AT1G23040.1
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr3_-_10790553 2.63 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
Chr4_-_15507176 2.63 AT4G32070.2
AT4G32070.1
Phox4
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Chr5_+_8082650 2.63 AT5G23950.2
AT5G23950.1
AT5G23950
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr4_+_17440177 2.63 AT4G36990.1
HSF4
heat shock factor 4
Chr3_-_9471039 2.62 AT3G25882.1
NIMIN-2
NIM1-interacting 2
Chr3_+_25355 2.61 AT3G01080.2
AT3G01080.3
AT3G01080.1
WRKY58
WRKY DNA-binding protein 58
Chr1_+_4794664 2.61 AT1G13990.1
AT1G13990.2
AT1G13990.3
AT1G13990
plant/protein
Chr5_-_5862462 2.59 AT5G17760.2
AT5G17760.1
AT5G17760
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_17976774 2.58 AT3G48520.1
CYP94B3
cytochrome P450, family 94, subfamily B, polypeptide 3
Chr1_+_6515644 2.58 AT1G18870.2
ICS2
isochorismate synthase 2
Chr1_-_20967162 2.57 AT1G56060.2
AT1G56060.1
AT1G56060
cysteine-rich/transmembrane domain protein B
Chr5_-_16998925 2.55 AT5G42510.1
AT5G42510
Disease resistance-responsive (dirigent-like protein) family protein
Chr5_+_2204206 2.55 AT5G07100.5
AT5G07100.3
AT5G07100.4
AT5G07100.2
AT5G07100.1
WRKY26
WRKY DNA-binding protein 26
Chr1_+_10897925 2.54 AT1G30720.1
AT1G30720
FAD-binding Berberine family protein
Chr1_-_17266724 2.54 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
Chr5_+_15501126 2.54 AT5G38710.1
AT5G38710.2
AT5G38710
Methylenetetrahydrofolate reductase family protein
Chr1_-_18477643 2.53 AT1G49900.1
AT1G49900
C2H2 type zinc finger transcription factor family
Chr5_+_25721733 2.52 AT5G64310.1
AGP1
arabinogalactan protein 1
Chr5_+_12558154 2.52 AT5G33290.1
XGD1
xylogalacturonan deficient 1
Chr3_-_18116569 2.51 AT3G48850.1
PHT3%3B2
phosphate transporter 3;2
Chr3_+_815550 2.50 AT3G03440.1
AT3G03440
ARM repeat superfamily protein
Chr1_-_23818481 2.49 AT1G64170.1
CHX16
cation/H+ exchanger 16
Chr4_+_12977192 2.48 AT4G25390.1
AT4G25390.2
AT4G25390
Protein kinase superfamily protein
Chr5_+_1153740 2.48 AT5G04200.1
MC9
metacaspase 9
Chr4_+_18530318 2.48 AT4G39955.1
AT4G39955
alpha/beta-Hydrolases superfamily protein
Chr4_+_10875233 2.44 AT4G20110.2
AT4G20110.1
VSR7
VACUOLAR SORTING RECEPTOR 7
Chr5_-_25168060 2.43 AT5G62680.1
GTR2
Major facilitator superfamily protein
Chr5_+_25210301 2.42 AT5G62770.1
AT5G62770
membrane-associated kinase regulator, putative (DUF1645)
Chr2_+_11620076 2.42 AT2G27180.1
AT2G27180
hypothetical protein
Chr5_-_9247540 2.42 AT5G26340.1
MSS1
Major facilitator superfamily protein
Chr3_+_18919327 2.42 AT3G50910.1
AT3G50910
netrin receptor DCC
Chr1_+_12346138 2.41 AT1G33960.2
AT1G33960.1
AIG1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_9421857 2.41 AT4G16750.1
AT4G16750
Integrase-type DNA-binding superfamily protein
Chr3_-_1776840 2.40 AT3G05937.1
AT3G05937
hypothetical protein
Chr3_+_6093990 2.39 AT3G17810.1
PYD1
pyrimidine 1
Chr1_-_3756998 2.39 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr1_-_10014256 2.37 AT1G28480.1
GRX480
Thioredoxin superfamily protein
Chr1_-_24362054 2.36 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr2_+_12767585 2.34 AT2G29950.1
ELF4-L1
ELF4-like 1
Chr3_-_11195171 2.34 AT3G29250.3
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_167842 2.34 AT1G01453.2
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr3_-_19165322 2.34 AT3G51660.1
AT3G51660
Tautomerase/MIF superfamily protein
Chr5_+_21030943 2.32 AT5G51770.1
AT5G51770
Protein kinase superfamily protein
Chr1_+_10537648 2.31 AT1G30040.2
GA2OX2
gibberellin 2-oxidase
Chr5_+_23067828 2.30 AT5G57010.1
AT5G57010
calmodulin-binding family protein
Chr1_+_30135024 2.30 AT1G80110.1
PP2-B11
phloem protein 2-B11
Chr5_+_20891163 2.29 AT5G51440.1
AT5G51440
HSP20-like chaperones superfamily protein
Chr1_-_977761 2.29 AT1G03850.1
AT1G03850.2
AT1G03850.3
GRXS13
Glutaredoxin family protein
Chr2_-_16780368 2.29 AT2G40170.1
GEA6
Stress induced protein
Chr2_-_10127589 2.28 AT2G23790.1
AT2G23790
calcium uniporter (DUF607)
Chr4_+_9385119 2.28 AT4G16670.2
AT4G16670.3
AT4G16670.1
AT4G16670
auxin canalization protein (DUF828)
Chr2_+_8998450 2.28 AT2G20920.1
AT2G20920
chaperone (DUF3353)
Chr4_-_14820595 2.27 AT4G30270.1
XTH24
xyloglucan endotransglucosylase/hydrolase 24
Chr2_-_16860779 2.26 AT2G40370.1
LAC5
laccase 5
Chr3_+_19875375 2.26 AT3G53600.1
AT3G53600
C2H2-type zinc finger family protein
Chr3_-_21303230 2.26 AT3G57540.1
AT3G57540
Remorin family protein
Chr5_-_10213598 2.26 AT5G28237.1
AT5G28237.2
AT5G28237
Pyridoxal-5'-phosphate-dependent enzyme family protein
Chr2_+_15514923 2.25 AT2G36950.1
AT2G36950
Heavy metal transport/detoxification superfamily protein
Chr3_+_16466144 2.25 AT3G45010.1
scpl48
serine carboxypeptidase-like 48
Chr2_-_13613573 2.24 AT2G31990.1
AT2G31990.3
AT2G31990.2
AT2G31990
Exostosin family protein
Chr1_+_26038905 2.23 AT1G69260.1
AFP1
ABI five binding protein
Chr4_+_17631500 2.23 AT4G37520.1
AT4G37520.2
AT4G37520
Peroxidase superfamily protein
Chr3_+_16383595 2.23 AT3G44880.1
ACD1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr5_+_25703649 2.22 AT5G64260.1
EXL2
EXORDIUM like 2
Chr1_+_5090809 2.22 AT1G14780.1
AT1G14780
MAC/Perforin domain-containing protein
Chr1_+_10537457 2.21 AT1G30040.1
GA2OX2
gibberellin 2-oxidase
Chr1_+_4915491 2.21 AT1G14370.1
APK2A
protein kinase 2A
Chr4_+_14055661 2.20 AT4G28420.2
AT4G28420.1
AT4G28420
Tyrosine transaminase family protein
Chr1_-_2282828 2.20 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
Chr4_-_17041131 2.20 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr5_+_7138762 2.20 AT5G21020.2
AT5G21020
transmembrane protein
Chr1_+_6568002 2.19 AT1G19020.1
AT1G19020
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Chr4_-_17041326 2.18 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr5_-_22236551 2.18 AT5G54730.2
G18F
yeast autophagy 18 F-like protein
Chr1_+_27462983 2.17 AT1G73000.1
PYL3
PYR1-like 3
Chr1_+_22893101 2.17 AT1G61930.1
AT1G61930
senescence regulator (Protein of unknown function, DUF584)
Chr5_+_25322975 2.17 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr2_-_17263017 2.17 AT2G41410.1
AT2G41410
Calcium-binding EF-hand family protein
Chr5_-_22237370 2.16 AT5G54730.1
G18F
yeast autophagy 18 F-like protein
Chr4_-_386479 2.16 AT4G00900.2
ECA2
ER-type Ca2+-ATPase 2
Chr2_-_8447355 2.16 AT2G19500.1
CKX2
cytokinin oxidase 2
Chr3_+_20736508 2.15 AT3G55880.1
AT3G55880.3
AT3G55880.2
AT3G55880.4
SUE4
Alpha/beta hydrolase related protein
Chr1_+_5638779 2.14 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
Chr5_-_2529421 2.14 AT5G07920.1
AT5G07920.3
AT5G07920.2
DGK1
diacylglycerol kinase1
Chr1_-_168088 2.14 AT1G01453.1
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr2_-_15151575 2.14 AT2G36080.3
AT2G36080.2
AT2G36080.4
AT2G36080.1
ABS2
AP2/B3-like transcriptional factor family protein
Chr5_+_24774980 2.14 AT5G61640.2
AT5G61640.1
PMSR1
peptidemethionine sulfoxide reductase 1
Chr4_-_16942060 2.14 AT4G35750.1
AT4G35750
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr1_+_3945584 2.13 AT1G11700.1
AT1G11700
senescence regulator (Protein of unknown function, DUF584)

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G28370

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.0 8.9 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
2.1 8.4 GO:0016139 glycoside catabolic process(GO:0016139)
1.9 7.4 GO:0015692 lead ion transport(GO:0015692)
1.4 10.1 GO:0080187 floral organ senescence(GO:0080187)
1.3 5.2 GO:1902457 negative regulation of stomatal opening(GO:1902457)
1.2 3.5 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
1.2 1.2 GO:0051205 protein insertion into membrane(GO:0051205)
1.1 3.3 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
1.0 4.1 GO:0010272 response to silver ion(GO:0010272)
1.0 2.9 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.9 2.8 GO:0033530 raffinose metabolic process(GO:0033530)
0.8 0.8 GO:0052314 toxin biosynthetic process(GO:0009403) indole phytoalexin biosynthetic process(GO:0009700) indole phytoalexin metabolic process(GO:0046217) phytoalexin metabolic process(GO:0052314) phytoalexin biosynthetic process(GO:0052315)
0.8 2.4 GO:0006210 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.8 3.1 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.8 3.1 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.7 3.7 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.7 10.4 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.7 2.1 GO:0046385 deoxyribonucleoside triphosphate biosynthetic process(GO:0009202) pyrimidine deoxyribonucleoside triphosphate metabolic process(GO:0009211) pyrimidine deoxyribonucleotide metabolic process(GO:0009219) pyrimidine deoxyribonucleotide biosynthetic process(GO:0009221) 2'-deoxyribonucleotide biosynthetic process(GO:0009265) deoxyribose phosphate biosynthetic process(GO:0046385)
0.7 3.5 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.7 2.1 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.7 2.1 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.7 1.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.6 1.9 GO:0010288 response to lead ion(GO:0010288)
0.6 1.9 GO:0015802 basic amino acid transport(GO:0015802)
0.6 5.0 GO:2000068 regulation of defense response to insect(GO:2000068)
0.6 4.2 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.6 1.8 GO:0010184 cytokinin transport(GO:0010184)
0.6 4.1 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.6 2.3 GO:0070509 calcium ion import(GO:0070509)
0.6 1.7 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.6 1.1 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.5 2.2 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438) negative regulation of seed maturation(GO:2000692)
0.5 1.6 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.5 3.7 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.5 2.1 GO:0048480 stigma development(GO:0048480)
0.5 2.0 GO:0033306 phytol metabolic process(GO:0033306)
0.5 1.5 GO:0032196 transposition(GO:0032196)
0.5 3.3 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.5 1.9 GO:0051289 protein homotetramerization(GO:0051289)
0.5 0.9 GO:0009093 cysteine catabolic process(GO:0009093)
0.5 2.7 GO:0043090 amino acid import(GO:0043090)
0.5 1.8 GO:0000256 allantoin catabolic process(GO:0000256)
0.4 3.1 GO:0060866 leaf abscission(GO:0060866)
0.4 1.3 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.4 5.2 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.4 18.3 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.4 1.3 GO:0071569 protein ufmylation(GO:0071569)
0.4 1.3 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.4 1.3 GO:0034486 vacuolar transmembrane transport(GO:0034486)
0.4 2.1 GO:0019323 pentose catabolic process(GO:0019323)
0.4 2.1 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.4 1.6 GO:0006423 cysteinyl-tRNA aminoacylation(GO:0006423)
0.4 1.2 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.4 1.2 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.4 2.4 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.4 1.2 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.4 1.2 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.4 2.8 GO:0009445 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.4 1.6 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.4 17.6 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.4 0.4 GO:0015744 succinate transport(GO:0015744)
0.4 1.2 GO:0080168 abscisic acid transport(GO:0080168)
0.4 1.2 GO:0015696 ammonium transport(GO:0015696)
0.4 1.2 GO:0010024 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.4 1.1 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.4 7.9 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.4 5.9 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.4 1.1 GO:0071763 nuclear membrane organization(GO:0071763)
0.4 2.8 GO:0070370 cellular heat acclimation(GO:0070370)
0.4 1.4 GO:0009270 response to humidity(GO:0009270)
0.4 0.7 GO:0051291 protein heterooligomerization(GO:0051291)
0.3 1.0 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.3 1.0 GO:0035246 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.3 1.3 GO:0033512 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.3 4.9 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.3 11.2 GO:0009625 response to insect(GO:0009625)
0.3 1.6 GO:0051865 protein autoubiquitination(GO:0051865)
0.3 0.9 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.3 1.2 GO:0030322 stabilization of membrane potential(GO:0030322)
0.3 0.9 GO:0010481 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.3 1.2 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.3 1.2 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.3 2.8 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.3 2.4 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.3 0.9 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.3 2.7 GO:0010230 alternative respiration(GO:0010230)
0.3 1.2 GO:0010507 negative regulation of autophagy(GO:0010507)
0.3 0.9 GO:0046203 spermidine catabolic process(GO:0046203)
0.3 0.9 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.3 3.5 GO:0048317 seed morphogenesis(GO:0048317)
0.3 0.8 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.3 3.6 GO:0006620 posttranslational protein targeting to membrane(GO:0006620)
0.3 0.6 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.3 14.1 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.3 11.3 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.3 5.2 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.3 4.3 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.3 2.7 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.3 1.3 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.3 0.3 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.3 2.6 GO:0098659 inorganic cation import into cell(GO:0098659) inorganic ion import into cell(GO:0099587)
0.3 4.0 GO:0006030 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.3 2.4 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.3 1.3 GO:0006106 fumarate metabolic process(GO:0006106)
0.3 1.6 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.3 0.5 GO:0031407 oxylipin metabolic process(GO:0031407)
0.3 2.1 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.3 2.1 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.3 2.3 GO:0080183 response to photooxidative stress(GO:0080183)
0.3 0.3 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.3 1.5 GO:0010273 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.3 0.8 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.2 2.5 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.2 1.2 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.2 1.5 GO:0071169 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.2 1.2 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.2 1.7 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.2 0.7 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.2 3.1 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.2 0.9 GO:0043461 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
0.2 0.9 GO:0043545 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.2 1.4 GO:0008300 isoprenoid catabolic process(GO:0008300)
0.2 0.7 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.2 0.9 GO:0050792 regulation of viral process(GO:0050792)
0.2 0.7 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.2 3.0 GO:0046688 response to copper ion(GO:0046688)
0.2 1.4 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.2 1.1 GO:0010148 transpiration(GO:0010148)
0.2 0.7 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.2 1.8 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.2 0.7 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.2 1.1 GO:0043068 positive regulation of programmed cell death(GO:0043068)
0.2 0.9 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.2 2.6 GO:0010262 somatic embryogenesis(GO:0010262)
0.2 1.7 GO:0009652 thigmotropism(GO:0009652)
0.2 0.6 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.2 25.8 GO:0010200 response to chitin(GO:0010200)
0.2 0.6 GO:0009968 negative regulation of signal transduction(GO:0009968)
0.2 0.6 GO:0000730 DNA recombinase assembly(GO:0000730)
0.2 1.9 GO:0071249 cellular response to nitrate(GO:0071249)
0.2 1.0 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.2 0.6 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.2 5.4 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.2 0.8 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.2 4.8 GO:0010193 response to ozone(GO:0010193)
0.2 0.8 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.2 0.8 GO:0019499 cyanide metabolic process(GO:0019499)
0.2 0.8 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.2 0.6 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.2 1.6 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.2 2.0 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.2 0.8 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
0.2 0.8 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.2 0.6 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.2 1.7 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.2 1.1 GO:0034227 tRNA thio-modification(GO:0034227)
0.2 1.5 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.2 1.9 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 3.9 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.2 2.8 GO:0043248 proteasome assembly(GO:0043248)
0.2 0.6 GO:0032365 intracellular lipid transport(GO:0032365)
0.2 4.5 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.2 1.8 GO:0006814 sodium ion transport(GO:0006814)
0.2 0.5 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.2 0.2 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.2 4.0 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.2 1.9 GO:0015914 phospholipid transport(GO:0015914)
0.2 1.4 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.2 0.2 GO:0080171 lytic vacuole organization(GO:0080171)
0.2 1.5 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.2 1.2 GO:1901984 negative regulation of histone modification(GO:0031057) negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.2 0.5 GO:0019079 viral genome replication(GO:0019079)
0.2 0.5 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.2 2.7 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.2 1.7 GO:0009608 response to symbiont(GO:0009608)
0.2 0.7 GO:0099636 cytoplasmic streaming(GO:0099636)
0.2 1.2 GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement(GO:1901527)
0.2 0.8 GO:0006116 NADH oxidation(GO:0006116)
0.2 2.6 GO:0050826 response to freezing(GO:0050826)
0.2 1.5 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.2 1.6 GO:0050821 protein stabilization(GO:0050821)
0.2 0.8 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.2 0.6 GO:0016598 protein arginylation(GO:0016598)
0.2 1.6 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.2 0.6 GO:0001120 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.2 0.5 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.2 2.3 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.2 0.3 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.2 1.5 GO:0015749 monosaccharide transport(GO:0015749)
0.2 4.6 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.2 0.5 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.2 0.8 GO:0055075 potassium ion homeostasis(GO:0055075)
0.2 1.1 GO:0010601 positive regulation of auxin biosynthetic process(GO:0010601) positive regulation of auxin metabolic process(GO:0090355)
0.2 1.1 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.2 0.8 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.2 0.5 GO:0007019 microtubule depolymerization(GO:0007019) metaxylem development(GO:0090058)
0.2 1.7 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.1 0.4 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.1 1.9 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.1 0.4 GO:0031086 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.1 1.2 GO:0006446 regulation of translational initiation(GO:0006446)
0.1 3.9 GO:0002239 response to oomycetes(GO:0002239)
0.1 0.6 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.1 2.2 GO:0019374 galactolipid metabolic process(GO:0019374)
0.1 0.7 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 1.1 GO:0046822 regulation of nucleocytoplasmic transport(GO:0046822)
0.1 26.2 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 2.4 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.6 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.4 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 1.4 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.1 0.6 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 1.5 GO:0044000 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 3.8 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.8 GO:0003400 regulation of COPII vesicle coating(GO:0003400) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
0.1 0.3 GO:0034389 lipid particle organization(GO:0034389)
0.1 0.4 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.8 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.1 2.1 GO:0010030 positive regulation of seed germination(GO:0010030)
0.1 0.5 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.1 1.4 GO:0016554 cytidine to uridine editing(GO:0016554)
0.1 0.6 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.1 0.3 GO:0051099 positive regulation of binding(GO:0051099)
0.1 2.3 GO:0043067 regulation of programmed cell death(GO:0043067)
0.1 1.4 GO:0006020 inositol metabolic process(GO:0006020)
0.1 0.6 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.1 1.0 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 0.9 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.1 0.1 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 0.9 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.1 0.4 GO:0071481 cellular response to gamma radiation(GO:0071480) cellular response to X-ray(GO:0071481)
0.1 3.2 GO:0009083 branched-chain amino acid catabolic process(GO:0009083)
0.1 1.1 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 7.1 GO:0055046 microgametogenesis(GO:0055046)
0.1 0.7 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.4 GO:0006015 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.1 1.3 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.1 1.4 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.6 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.1 0.5 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.3 GO:0010071 root meristem specification(GO:0010071)
0.1 3.0 GO:0071805 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.1 1.2 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 0.1 GO:0006225 UDP biosynthetic process(GO:0006225) nucleoside diphosphate biosynthetic process(GO:0009133) pyrimidine nucleoside diphosphate metabolic process(GO:0009138) pyrimidine nucleoside diphosphate biosynthetic process(GO:0009139) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.1 4.0 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.1 1.5 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.1 0.8 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 0.5 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.1 1.2 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.1 0.3 GO:0071277 cellular response to calcium ion(GO:0071277)
0.1 0.7 GO:0016584 nucleosome positioning(GO:0016584)
0.1 0.8 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.4 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 1.9 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.1 1.1 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 3.2 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.1 0.3 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.1 2.3 GO:0090630 activation of GTPase activity(GO:0090630)
0.1 0.4 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.1 1.1 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.1 1.1 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 0.3 GO:0010269 response to selenium ion(GO:0010269)
0.1 0.2 GO:1901562 response to paraquat(GO:1901562)
0.1 0.5 GO:0031647 regulation of protein stability(GO:0031647)
0.1 1.2 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.1 1.2 GO:0009554 megasporogenesis(GO:0009554)
0.1 2.4 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.1 1.5 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 0.5 GO:0048439 flower morphogenesis(GO:0048439)
0.1 0.2 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 0.7 GO:0045899 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.1 0.3 GO:0006004 fucose metabolic process(GO:0006004) fucose biosynthetic process(GO:0042353)
0.1 1.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.1 0.3 GO:0072337 modified amino acid transport(GO:0072337)
0.1 1.5 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.1 0.3 GO:0030656 regulation of vitamin metabolic process(GO:0030656) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.1 0.3 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.1 3.3 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.1 1.2 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.1 0.6 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.1 1.6 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.1 0.3 GO:0055047 generative cell mitosis(GO:0055047)
0.1 6.7 GO:0010150 leaf senescence(GO:0010150) organ senescence(GO:0010260)
0.1 1.1 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.1 1.7 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.1 0.2 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.1 0.8 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.8 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.1 0.4 GO:0010117 photoprotection(GO:0010117)
0.1 0.4 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.1 1.2 GO:0015743 malate transport(GO:0015743)
0.1 2.5 GO:0010091 trichome branching(GO:0010091)
0.1 13.9 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.1 0.5 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.1 5.7 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.1 0.9 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.1 2.3 GO:0072655 protein localization to mitochondrion(GO:0070585) establishment of protein localization to mitochondrion(GO:0072655)
0.1 3.3 GO:0034605 cellular response to heat(GO:0034605)
0.1 3.2 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.1 0.8 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 1.3 GO:0019674 NAD metabolic process(GO:0019674)
0.1 0.4 GO:0009268 response to pH(GO:0009268)
0.1 0.3 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.1 3.3 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.1 1.2 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.1 1.4 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.1 0.5 GO:0010225 response to UV-C(GO:0010225)
0.1 0.6 GO:1902645 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.1 0.5 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.1 6.9 GO:0009751 response to salicylic acid(GO:0009751)
0.1 0.9 GO:0097501 stress response to metal ion(GO:0097501)
0.1 0.6 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 1.8 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.1 3.1 GO:0009631 cold acclimation(GO:0009631)
0.1 0.2 GO:0080121 AMP transport(GO:0080121)
0.1 0.7 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.1 1.6 GO:0007568 aging(GO:0007568)
0.1 0.3 GO:0006517 protein deglycosylation(GO:0006517)
0.1 0.3 GO:0009261 coenzyme catabolic process(GO:0009109) purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.1 0.3 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.1 0.5 GO:0051567 histone H3-K9 methylation(GO:0051567)
0.1 0.7 GO:0033962 cytoplasmic mRNA processing body assembly(GO:0033962)
0.1 0.9 GO:0071900 regulation of protein serine/threonine kinase activity(GO:0071900)
0.1 0.9 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.1 5.2 GO:0042594 response to starvation(GO:0042594)
0.1 1.0 GO:0018393 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.1 0.7 GO:0016925 protein sumoylation(GO:0016925)
0.1 0.5 GO:0051046 regulation of exocytosis(GO:0017157) regulation of secretion(GO:0051046) regulation of secretion by cell(GO:1903530)
0.1 3.2 GO:0071369 cellular response to ethylene stimulus(GO:0071369)
0.1 0.6 GO:0010440 stomatal lineage progression(GO:0010440)
0.1 0.9 GO:0001709 cell fate determination(GO:0001709)
0.1 2.0 GO:0010162 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.1 1.1 GO:0009395 phospholipid catabolic process(GO:0009395)
0.1 0.3 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 0.2 GO:0046621 negative regulation of organ growth(GO:0046621)
0.1 1.9 GO:0006012 galactose metabolic process(GO:0006012)
0.1 1.6 GO:0045333 cellular respiration(GO:0045333)
0.1 0.9 GO:0006188 IMP biosynthetic process(GO:0006188)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 0.2 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 0.2 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 1.3 GO:0010431 seed maturation(GO:0010431)
0.1 4.5 GO:0016579 protein deubiquitination(GO:0016579)
0.1 0.1 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 1.5 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.1 0.2 GO:0006425 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.1 1.0 GO:0051028 mRNA export from nucleus(GO:0006406) mRNA transport(GO:0051028) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427)
0.1 0.7 GO:0060321 acceptance of pollen(GO:0060321)
0.1 2.0 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.1 0.3 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.3 GO:0006591 ornithine metabolic process(GO:0006591)
0.1 0.4 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.1 3.1 GO:0006413 translational initiation(GO:0006413)
0.1 0.7 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.1 0.8 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.1 0.8 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.1 0.8 GO:0006338 chromatin remodeling(GO:0006338)
0.1 17.2 GO:0030163 protein catabolic process(GO:0030163)
0.1 0.4 GO:2000067 regulation of root morphogenesis(GO:2000067)
0.1 0.3 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.1 1.6 GO:1900140 regulation of seedling development(GO:1900140)
0.1 0.3 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.1 0.3 GO:0000706 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.0 0.5 GO:1990937 xylan acetylation(GO:1990937)
0.0 1.0 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.0 1.0 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 2.4 GO:0009566 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 1.9 GO:0006887 exocytosis(GO:0006887)
0.0 0.9 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.1 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.4 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.5 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.8 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.6 GO:0033866 coenzyme A biosynthetic process(GO:0015937) nucleoside bisphosphate biosynthetic process(GO:0033866) ribonucleoside bisphosphate biosynthetic process(GO:0034030) purine nucleoside bisphosphate biosynthetic process(GO:0034033)
0.0 1.0 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.0 1.9 GO:0006897 endocytosis(GO:0006897)
0.0 1.4 GO:0051169 nucleocytoplasmic transport(GO:0006913) nuclear transport(GO:0051169)
0.0 0.2 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.0 0.0 GO:0032351 negative regulation of hormone metabolic process(GO:0032351)
0.0 0.3 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 0.3 GO:0010088 phloem development(GO:0010088)
0.0 0.1 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.0 1.1 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.2 GO:0001522 pseudouridine synthesis(GO:0001522)
0.0 4.8 GO:0016192 vesicle-mediated transport(GO:0016192)
0.0 0.1 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.0 5.1 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 1.2 GO:0016042 lipid catabolic process(GO:0016042)
0.0 0.5 GO:0006545 glycine biosynthetic process(GO:0006545)
0.0 0.9 GO:0006760 folic acid-containing compound metabolic process(GO:0006760)
0.0 1.0 GO:0009853 photorespiration(GO:0009853)
0.0 0.1 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.2 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.0 0.3 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 6.7 GO:0006357 regulation of transcription from RNA polymerase II promoter(GO:0006357)
0.0 0.6 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.7 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.5 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.0 0.1 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.5 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 2.3 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 1.4 GO:0009738 abscisic acid-activated signaling pathway(GO:0009738)
0.0 0.2 GO:0052386 cell wall thickening(GO:0052386)
0.0 0.1 GO:0032844 regulation of telomere maintenance(GO:0032204) regulation of homeostatic process(GO:0032844)
0.0 0.1 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.0 0.1 GO:0046487 glyoxylate cycle(GO:0006097) glyoxylate metabolic process(GO:0046487)
0.0 0.1 GO:0045824 negative regulation of innate immune response(GO:0045824) negative regulation of immune response(GO:0050777)
0.0 0.2 GO:0006415 translational termination(GO:0006415)
0.0 0.0 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.0 0.2 GO:0000375 RNA splicing, via transesterification reactions(GO:0000375) RNA splicing, via transesterification reactions with bulged adenosine as nucleophile(GO:0000377)
0.0 0.3 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.1 GO:0007052 mitotic spindle organization(GO:0007052)
0.0 0.3 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.4 GO:0000911 cytokinesis by cell plate formation(GO:0000911)
0.0 1.2 GO:0006457 protein folding(GO:0006457)
0.0 0.1 GO:0019346 transsulfuration(GO:0019346) homocysteine metabolic process(GO:0050667)
0.0 0.1 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 0.4 GO:0002181 cytoplasmic translation(GO:0002181)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.7 4.2 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.7 2.0 GO:0009514 glyoxysome(GO:0009514)
0.6 8.6 GO:0005801 cis-Golgi network(GO:0005801)
0.5 1.5 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.5 4.2 GO:0000813 ESCRT I complex(GO:0000813)
0.4 1.7 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.4 2.0 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.4 1.5 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.3 4.6 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.3 0.9 GO:1990112 RQC complex(GO:1990112)
0.3 4.7 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.3 1.4 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.3 12.0 GO:0005764 lysosome(GO:0005764)
0.3 5.3 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.3 2.4 GO:0017119 Golgi transport complex(GO:0017119)
0.3 1.6 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.3 2.6 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.2 4.2 GO:0045275 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.2 0.5 GO:0000118 histone deacetylase complex(GO:0000118)
0.2 2.0 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.2 2.9 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.2 2.9 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.2 1.1 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.2 2.0 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.2 1.5 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.2 1.1 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.2 1.7 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.2 1.3 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.2 1.7 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.2 1.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.2 0.8 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.2 1.6 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.2 1.2 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.2 3.2 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.2 2.4 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.2 2.2 GO:0005844 polysome(GO:0005844)
0.2 0.7 GO:0032044 DSIF complex(GO:0032044)
0.2 2.2 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.2 1.5 GO:0000791 euchromatin(GO:0000791)
0.2 4.4 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.2 1.4 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.2 3.8 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.2 2.7 GO:0000786 nucleosome(GO:0000786)
0.2 2.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.2 0.8 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.2 1.4 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.2 1.9 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.2 2.4 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.2 0.6 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.2 0.5 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.2 1.5 GO:0072546 ER membrane protein complex(GO:0072546)
0.2 3.9 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.2 0.8 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 1.5 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.1 0.8 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 1.8 GO:0030686 90S preribosome(GO:0030686)
0.1 1.8 GO:0005682 U5 snRNP(GO:0005682)
0.1 2.3 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.1 0.6 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063) Holliday junction resolvase complex(GO:0048476)
0.1 1.0 GO:0070390 transcription export complex 2(GO:0070390)
0.1 1.1 GO:0010445 nuclear dicing body(GO:0010445)
0.1 0.7 GO:0035145 exon-exon junction complex(GO:0035145)
0.1 1.1 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 0.4 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.1 0.7 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.1 1.8 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 0.6 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 4.8 GO:0016592 mediator complex(GO:0016592)
0.1 1.1 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.5 GO:0000938 GARP complex(GO:0000938)
0.1 0.5 GO:0034657 GID complex(GO:0034657)
0.1 0.7 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.1 0.6 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.1 0.6 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.6 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.1 1.6 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.1 0.3 GO:0031902 late endosome membrane(GO:0031902)
0.1 0.8 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.9 GO:0016272 prefoldin complex(GO:0016272)
0.1 2.1 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 1.2 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 3.1 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.1 0.5 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 3.0 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 1.6 GO:0044452 nucleolar part(GO:0044452)
0.1 1.2 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 0.3 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.1 0.5 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 5.3 GO:0090406 pollen tube(GO:0090406)
0.1 0.1 GO:0097344 Rix1 complex(GO:0097344)
0.1 1.2 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.1 2.1 GO:0000145 exocyst(GO:0000145)
0.1 1.0 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 0.8 GO:0008180 COP9 signalosome(GO:0008180)
0.1 1.8 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.1 1.0 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.1 1.0 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 5.1 GO:0009524 phragmoplast(GO:0009524)
0.1 0.8 GO:0098799 outer mitochondrial membrane protein complex(GO:0098799)
0.1 0.5 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 3.7 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 7.8 GO:0000790 nuclear chromatin(GO:0000790)
0.1 3.9 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 4.4 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 2.8 GO:0000502 proteasome complex(GO:0000502)
0.1 0.9 GO:0000815 ESCRT III complex(GO:0000815)
0.1 1.0 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 1.0 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1 1.1 GO:0005686 U2 snRNP(GO:0005686)
0.1 1.4 GO:0005761 mitochondrial ribosome(GO:0005761)
0.1 5.6 GO:0033646 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.1 0.4 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 0.2 GO:0000811 GINS complex(GO:0000811)
0.1 1.3 GO:0032040 small-subunit processome(GO:0032040)
0.1 0.4 GO:0000974 Prp19 complex(GO:0000974)
0.1 0.5 GO:0034708 methyltransferase complex(GO:0034708)
0.1 0.5 GO:0089701 U2AF(GO:0089701)
0.0 0.4 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.8 GO:0031965 nuclear membrane(GO:0031965)
0.0 1.1 GO:0032592 integral component of mitochondrial membrane(GO:0032592)
0.0 2.5 GO:0005811 lipid particle(GO:0005811)
0.0 0.1 GO:0098576 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.7 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.8 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.4 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 1.5 GO:0098687 chromosomal region(GO:0098687)
0.0 2.0 GO:0000785 chromatin(GO:0000785)
0.0 3.4 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 30.2 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.9 GO:0009504 cell plate(GO:0009504)
0.0 2.1 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.4 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.4 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.2 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.3 GO:0005769 early endosome(GO:0005769)
0.0 3.6 GO:0016021 integral component of membrane(GO:0016021)
0.0 0.6 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.1 GO:0030684 preribosome(GO:0030684)
0.0 0.6 GO:0000139 Golgi membrane(GO:0000139)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 7.1 GO:0008909 isochorismate synthase activity(GO:0008909)
1.6 6.3 GO:0046593 mandelonitrile lyase activity(GO:0046593)
1.1 10.3 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
1.1 4.3 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.9 2.8 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.9 3.7 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.8 3.3 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.8 2.3 GO:0015292 uniporter activity(GO:0015292)
0.7 8.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.7 2.1 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.7 2.1 GO:0070678 preprotein binding(GO:0070678)
0.7 2.7 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.7 3.4 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.6 3.1 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.6 1.8 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.6 2.9 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.6 3.5 GO:0009041 uridylate kinase activity(GO:0009041)
0.6 4.5 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.5 6.0 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.5 2.6 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.5 1.6 GO:0008936 nicotinamidase activity(GO:0008936)
0.5 4.1 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.5 1.5 GO:0004776 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.5 2.5 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.5 1.5 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.5 1.5 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.5 7.3 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.5 1.9 GO:0032791 lead ion binding(GO:0032791)
0.5 0.5 GO:0030332 cyclin binding(GO:0030332)
0.5 1.9 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.5 2.4 GO:0003680 AT DNA binding(GO:0003680)
0.5 3.3 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.5 8.9 GO:0015248 sterol transporter activity(GO:0015248)
0.5 0.9 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.5 1.4 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.4 1.3 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.4 1.7 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.4 1.7 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.4 1.3 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.4 3.0 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.4 1.3 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.4 1.6 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.4 1.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.4 1.2 GO:0008517 folic acid transporter activity(GO:0008517)
0.4 0.4 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.4 1.1 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.4 1.1 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.4 1.9 GO:0035197 siRNA binding(GO:0035197)
0.4 1.5 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.4 1.4 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.3 1.7 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.3 1.7 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.3 1.7 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.3 1.7 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.3 2.7 GO:0009916 alternative oxidase activity(GO:0009916)
0.3 3.4 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.3 1.0 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.3 8.0 GO:0004568 chitinase activity(GO:0004568)
0.3 1.7 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.3 1.0 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.3 1.3 GO:0016748 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.3 2.3 GO:0004834 tryptophan synthase activity(GO:0004834)
0.3 1.3 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.3 2.2 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.3 0.9 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.3 2.4 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.3 1.2 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.3 2.1 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.3 2.7 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.3 0.9 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.3 1.8 GO:0070547 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.3 0.9 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.3 0.9 GO:0032131 alkylated DNA binding(GO:0032131)
0.3 2.0 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.3 4.0 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.3 1.1 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.3 0.8 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.3 1.7 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.3 0.8 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.3 2.5 GO:0035198 miRNA binding(GO:0035198)
0.3 3.9 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.3 6.6 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.3 4.5 GO:0031369 translation initiation factor binding(GO:0031369)
0.3 3.1 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.3 1.3 GO:0004333 fumarate hydratase activity(GO:0004333)
0.3 0.8 GO:0047912 galacturonokinase activity(GO:0047912)
0.3 0.8 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.3 1.3 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.2 1.2 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.2 5.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.2 0.7 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.2 5.5 GO:0097602 cullin family protein binding(GO:0097602)
0.2 4.0 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.2 2.6 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.2 1.8 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.2 1.1 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.2 1.6 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.2 1.9 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.2 0.6 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.2 0.6 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.2 0.4 GO:0052736 beta-glucanase activity(GO:0052736)
0.2 1.9 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.2 1.0 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.2 0.8 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.2 1.4 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.2 0.4 GO:0047635 L-alanine:2-oxoglutarate aminotransferase activity(GO:0004021) alanine-oxo-acid transaminase activity(GO:0047635)
0.2 1.0 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.2 14.6 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.2 1.4 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.2 1.6 GO:0017091 AU-rich element binding(GO:0017091)
0.2 1.4 GO:0018822 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.2 3.7 GO:0016844 strictosidine synthase activity(GO:0016844)
0.2 1.0 GO:0030371 translation repressor activity(GO:0030371)
0.2 1.5 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 3.2 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.2 0.6 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.2 1.1 GO:0070122 isopeptidase activity(GO:0070122)
0.2 1.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.2 3.4 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.2 5.8 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.2 2.8 GO:0051117 ATPase binding(GO:0051117)
0.2 2.0 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.2 1.2 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.2 0.7 GO:0005313 L-glutamate transmembrane transporter activity(GO:0005313)
0.2 5.3 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.2 0.6 GO:0004057 arginyltransferase activity(GO:0004057)
0.2 0.5 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.2 1.9 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.2 2.0 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.2 0.5 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.2 1.1 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 0.6 GO:0097157 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.2 0.9 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.1 1.3 GO:0016273 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.1 1.2 GO:0015140 malate transmembrane transporter activity(GO:0015140) C4-dicarboxylate transmembrane transporter activity(GO:0015556)
0.1 0.7 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 2.3 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.6 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 0.6 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.1 0.4 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.1 0.4 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.1 0.7 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 1.0 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 1.0 GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity(GO:0051748)
0.1 11.6 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 6.2 GO:0015081 sodium ion transmembrane transporter activity(GO:0015081)
0.1 3.2 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.5 GO:0051731 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113) polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.1 1.2 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.1 5.7 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.1 0.6 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.1 0.6 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 0.6 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 0.6 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.5 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 15.1 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 0.6 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.1 1.2 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 0.7 GO:0015368 calcium:cation antiporter activity(GO:0015368) calcium:proton antiporter activity(GO:0015369) metal ion:proton antiporter activity(GO:0051139)
0.1 0.4 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.1 1.6 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.1 0.3 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.1 1.4 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 1.8 GO:0031490 chromatin DNA binding(GO:0031490)
0.1 0.3 GO:0048030 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.1 3.8 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 0.5 GO:0016675 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 6.3 GO:0005096 GTPase activator activity(GO:0005096)
0.1 1.7 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 1.2 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.4 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.7 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 1.6 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.1 0.9 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.9 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.6 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 1.9 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.1 0.6 GO:0016426 tRNA (adenine) methyltransferase activity(GO:0016426)
0.1 1.1 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 10.1 GO:0019900 kinase binding(GO:0019900)
0.1 0.5 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 0.7 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 14.1 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.1 1.2 GO:0019902 phosphatase binding(GO:0019902)
0.1 24.2 GO:0019787 ubiquitin-like protein transferase activity(GO:0019787)
0.1 0.9 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 0.5 GO:0008732 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.1 6.5 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 0.3 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 0.3 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.1 1.2 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.1 0.5 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 1.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.1 0.4 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1 0.4 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 1.2 GO:0008097 5S rRNA binding(GO:0008097)
0.1 0.3 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.6 GO:0001671 ATPase activator activity(GO:0001671)
0.1 1.4 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.1 0.8 GO:0019201 nucleotide kinase activity(GO:0019201)
0.1 1.2 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 1.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.2 GO:0015377 anion:cation symporter activity(GO:0015296) cation:chloride symporter activity(GO:0015377)
0.1 0.2 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.1 1.0 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 1.1 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.3 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 1.2 GO:0031491 nucleosome binding(GO:0031491)
0.1 0.5 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 0.7 GO:0016755 transferase activity, transferring amino-acyl groups(GO:0016755)
0.1 0.3 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.1 5.0 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.1 0.5 GO:0032977 membrane insertase activity(GO:0032977)
0.1 3.5 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 0.7 GO:0030276 clathrin binding(GO:0030276)
0.1 0.6 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.7 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 0.3 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.1 1.7 GO:0010427 abscisic acid binding(GO:0010427)
0.1 3.5 GO:0016831 carboxy-lyase activity(GO:0016831)
0.1 4.3 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.1 3.2 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 1.0 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 2.7 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.1 1.4 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.1 0.3 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 1.2 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.1 0.5 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 0.6 GO:0070300 phosphatidic acid binding(GO:0070300)
0.1 0.2 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 0.5 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 0.4 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.1 0.2 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.1 0.2 GO:0004359 glutaminase activity(GO:0004359)
0.1 2.5 GO:0051540 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.1 29.5 GO:0000976 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.1 1.3 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 1.4 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.1 4.2 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.1 2.2 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 0.4 GO:0048038 quinone binding(GO:0048038)
0.1 0.4 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.1 1.0 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.3 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.1 1.0 GO:0017069 snRNA binding(GO:0017069)
0.1 0.5 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.2 GO:0003785 actin monomer binding(GO:0003785)
0.0 2.6 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 2.3 GO:0005543 phospholipid binding(GO:0005543)
0.0 0.7 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.6 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.2 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 2.7 GO:0032182 ubiquitin-like protein binding(GO:0032182) ubiquitin binding(GO:0043130)
0.0 1.8 GO:0051020 GTPase binding(GO:0051020)
0.0 0.5 GO:0016289 CoA hydrolase activity(GO:0016289)
0.0 0.1 GO:0004567 beta-mannosidase activity(GO:0004567)
0.0 0.3 GO:0045182 translation regulator activity(GO:0045182)
0.0 0.4 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 1.6 GO:0042393 histone binding(GO:0042393)
0.0 0.2 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 1.7 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 0.0 GO:0004860 protein kinase inhibitor activity(GO:0004860)
0.0 0.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 1.4 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 2.8 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.9 GO:0015211 purine nucleoside transmembrane transporter activity(GO:0015211)
0.0 0.4 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.8 GO:0019887 protein kinase regulator activity(GO:0019887)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 4.4 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.3 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.1 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.0 0.7 GO:0031386 protein tag(GO:0031386)
0.0 2.9 GO:0032561 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.1 GO:0032404 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.0 0.8 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.6 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.1 GO:0002020 protease binding(GO:0002020)
0.0 0.0 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.0 0.4 GO:0003684 damaged DNA binding(GO:0003684)
0.0 1.6 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.6 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 0.2 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.1 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.0 0.3 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 1.7 GO:0003779 actin binding(GO:0003779)
0.0 0.9 GO:0003682 chromatin binding(GO:0003682)
0.0 0.1 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 2.3 GO:0043531 ADP binding(GO:0043531)
0.0 0.6 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.1 GO:0016531 copper chaperone activity(GO:0016531)
0.0 0.1 GO:0009881 photoreceptor activity(GO:0009881) blue light photoreceptor activity(GO:0009882)
0.0 0.6 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.1 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.4 GO:0008134 transcription factor binding(GO:0008134)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 0.4 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.3 0.3 PID RAS PATHWAY Regulation of Ras family activation
0.3 0.9 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.2 0.8 PID TRKR PATHWAY Neurotrophic factor-mediated Trk receptor signaling
0.1 0.4 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.1 1.0 PID CDC42 PATHWAY CDC42 signaling events
0.1 0.7 PID P73PATHWAY p73 transcription factor network
0.1 0.4 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.1 0.2 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.1 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.1 0.2 PID ARF 3PATHWAY Arf1 pathway
0.0 0.2 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.0 0.2 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.9 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS Genes involved in Synthesis of bile acids and bile salts
0.4 1.1 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.3 1.0 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.3 1.5 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.3 1.2 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.3 1.1 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.3 0.8 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.3 2.1 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.3 3.6 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.2 1.3 REACTOME NUCLEOTIDE EXCISION REPAIR Genes involved in Nucleotide Excision Repair
0.1 1.0 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.1 0.1 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 1.1 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.4 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.1 0.2 REACTOME AXON GUIDANCE Genes involved in Axon guidance
0.1 0.2 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.4 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.3 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.4 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.0 0.7 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.0 0.2 REACTOME MRNA PROCESSING Genes involved in mRNA Processing
0.0 0.2 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination