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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G19040

Z-value: 0.52

Transcription factors associated with AT1G19040

Gene Symbol Gene ID Gene Info
AT1G19040
AT1G19040 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G19040arTal_v1_Chr1_+_6576077_65760770.481.0e-02Click!

Activity profile of AT1G19040 motif

Sorted Z-values of AT1G19040 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_25765718 3.54 AT1G68620.1
AT1G68620
alpha/beta-Hydrolases superfamily protein
Chr3_-_2699257 2.95 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr3_-_21189859 2.89 AT3G57260.1
AT3G57260.2
BGL2
beta-1,3-glucanase 2
Chr3_-_2699420 2.87 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr3_-_19643276 2.72 AT3G52970.1
AT3G52970.2
CYP76G1
cytochrome P450, family 76, subfamily G, polypeptide 1
Chr4_+_12461907 2.72 AT4G24000.1
CSLG2
cellulose synthase like G2
Chr1_+_21652988 2.62 AT1G58340.1
ZF14
MATE efflux family protein
Chr3_+_9892791 2.60 AT3G26840.1
PES2
Esterase/lipase/thioesterase family protein
Chr3_-_1063103 2.58 AT3G04070.2
AT3G04070.1
NAC047
NAC domain containing protein 47
Chr2_+_18558885 2.55 AT2G44990.2
AT2G44990.3
AT2G44990.1
CCD7
carotenoid cleavage dioxygenase 7
Chr3_-_4269691 2.47 AT3G13229.1
AT3G13229
kinesin-like protein (DUF868)
Chr1_-_12398418 2.43 AT1G34060.1
AT1G34060
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr5_-_6042938 2.42 AT5G18270.2
AT5G18270.1
ANAC087
NAC domain containing protein 87
Chr5_+_15501126 2.39 AT5G38710.1
AT5G38710.2
AT5G38710
Methylenetetrahydrofolate reductase family protein
Chr4_-_16344818 2.39 AT4G34131.1
UGT73B3
UDP-glucosyl transferase 73B3
Chr4_+_12463312 2.35 AT4G24000.2
CSLG2
cellulose synthase like G2
Chr5_-_5424615 2.34 AT5G16570.2
AT5G16570.1
GLN1%3B4
glutamine synthetase 1;4
Chr3_+_19086344 2.30 AT3G51430.1
AT3G51430.2
YLS2
Calcium-dependent phosphotriesterase superfamily protein
Chr3_+_1635194 2.26 AT3G05630.1
PLDP2
phospholipase D P2
Chr1_-_12397986 2.25 AT1G34060.2
AT1G34060
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr4_+_18409846 2.23 AT4G39670.1
AT4G39670
Glycolipid transfer protein (GLTP) family protein
Chr5_-_17994584 2.22 AT5G44610.3
AT5G44610.2
AT5G44610.1
MAP18
microtubule-associated protein 18
Chr3_+_995217 2.19 AT3G03870.1
AT3G03870
transmembrane protein
Chr3_+_995062 2.19 AT3G03870.2
AT3G03870
transmembrane protein
Chr4_-_2234689 2.10 AT4G04490.1
CRK36
cysteine-rich RLK (RECEPTOR-like protein kinase) 36
Chr5_+_25550937 2.07 AT5G63850.1
AAP4
amino acid permease 4
Chr5_-_2079005 2.04 AT5G06720.1
PA2
peroxidase 2
Chr5_+_3839316 1.95 AT5G11920.3
AT5G11920.1
AT5G11920.2
cwINV6
6-&1-fructan exohydrolase
Chr5_+_4213955 1.92 AT5G13210.1
AT5G13210
Uncharacterized conserved protein UCP015417, vWA
Chr5_+_8752684 1.89 AT5G25260.1
AT5G25260
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr3_-_21834514 1.84 AT3G59070.1
AT3G59070
Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein
Chr3_-_2498095 1.81 AT3G07820.1
AT3G07820
Pectin lyase-like superfamily protein
Chr3_+_6097201 1.81 AT3G17820.1
GLN1.3
glutamine synthetase 1.3
Chr3_-_6804114 1.80 AT3G19580.2
ZF2
zinc-finger protein 2
Chr5_-_22237370 1.80 AT5G54730.1
G18F
yeast autophagy 18 F-like protein
Chr5_-_22236551 1.77 AT5G54730.2
G18F
yeast autophagy 18 F-like protein
Chr3_-_6804296 1.76 AT3G19580.1
ZF2
zinc-finger protein 2
Chr2_+_18152078 1.76 AT2G43820.1
UGT74F2
UDP-glucosyltransferase 74F2
Chr5_+_18651265 1.74 AT5G45990.2
AT5G45990.1
AT5G45990
crooked neck protein, putative / cell cycle protein
Chr1_-_8967562 1.73 AT1G25530.1
AT1G25530
Transmembrane amino acid transporter family protein
Chr3_+_512220 1.71 AT3G02480.1
AT3G02480
Late embryogenesis abundant protein (LEA) family protein
Chr3_-_10898841 1.69 AT3G28890.1
AT3G28890.2
RLP43
receptor like protein 43
Chr4_-_10567838 1.65 AT4G19370.1
AT4G19370
chitin synthase, putative (DUF1218)
Chr3_+_9685932 1.63 AT3G26470.1
AT3G26470
Powdery mildew resistance protein, RPW8 domain-containing protein
Chr1_-_17706460 1.61 AT1G48000.1
MYB112
myb domain protein 112
Chr2_-_9866562 1.61 AT2G23170.1
GH3.3
Auxin-responsive GH3 family protein
Chr4_+_2238370 1.60 AT4G04500.2
AT4G04500.3
AT4G04500.1
CRK37
cysteine-rich RLK (RECEPTOR-like protein kinase) 37
Chr3_-_6676520 1.59 AT3G19270.1
AT3G19270.2
CYP707A4
cytochrome P450, family 707, subfamily A, polypeptide 4
Chr1_-_10071108 1.59 AT1G28650.1
AT1G28650
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_437591 1.57 AT4G01010.1
AT4G01010.2
CNGC13
cyclic nucleotide-gated channel 13
Chr4_+_5811115 1.57 AT4G09100.1
AT4G09100
RING/U-box superfamily protein
Chr1_+_10537648 1.56 AT1G30040.2
GA2OX2
gibberellin 2-oxidase
Chr2_+_8647721 1.55 AT2G20030.1
AT2G20030
RING/U-box superfamily protein
Chr1_+_10537457 1.53 AT1G30040.1
GA2OX2
gibberellin 2-oxidase
Chr3_+_6536534 1.52 AT3G18950.1
AT3G18950
Transducin/WD40 repeat-like superfamily protein
Chr4_-_14545310 1.50 AT4G29700.1
AT4G29700
Alkaline-phosphatase-like family protein
Chr2_-_1339468 1.48 AT2G04050.1
AT2G04050
MATE efflux family protein
Chr1_-_27707518 1.43 AT1G73680.2
AT1G73680.1
ALPHA DOX2
alpha dioxygenase
Chr1_+_22733359 1.42 AT1G61610.2
AT1G61610.1
AT1G61610
S-locus lectin protein kinase family protein
Chr5_+_16733663 1.41 AT5G41800.1
AT5G41800
Transmembrane amino acid transporter family protein
Chr3_-_20895634 1.41 AT3G56350.1
AT3G56350
Iron/manganese superoxide dismutase family protein
Chr1_+_18310428 1.39 AT1G49470.1
AT1G49470
transmembrane epididymal protein (DUF716)
Chr1_-_9140439 1.39 AT1G26410.1
AT1G26410
FAD-binding Berberine family protein
Chr1_-_27707213 1.35 AT1G73680.3
ALPHA DOX2
alpha dioxygenase
Chr3_-_9710100 1.35 AT3G26500.1
PIRL2
plant intracellular ras group-related LRR 2
Chr3_-_3414019 1.34 AT3G10910.1
AT3G10910
RING/U-box superfamily protein
Chr1_-_27706617 1.33 AT1G73680.4
ALPHA DOX2
alpha dioxygenase
Chr2_+_13201350 1.32 AT2G31020.1
ORP1A
OSBP(oxysterol binding protein)-related protein 1A
Chr4_+_11172622 1.31 AT4G20860.1
AT4G20860
FAD-binding Berberine family protein
Chr3_-_17267128 1.29 AT3G46890.1
AT3G46890
maternal effect embryo arrest protein
Chr5_+_9974411 1.28 AT5G27940.1
WPP3
WPP domain protein 3
Chr2_+_17639001 1.23 AT2G42350.1
AT2G42350
RING/U-box superfamily protein
Chr4_-_13975919 1.23 AT4G28140.1
AT4G28140
Integrase-type DNA-binding superfamily protein
Chr3_+_8321329 1.22 AT3G23280.1
AT3G23280.2
XBAT35
hypothetical protein
Chr4_-_7011406 1.22 AT4G11600.1
GPX6
glutathione peroxidase 6
Chr1_+_25442404 1.19 AT1G67856.1
AT1G67856
RING/U-box superfamily protein
Chr2_+_14575392 1.17 AT2G34610.1
AT2G34610
cotton fiber protein
Chr4_-_9453300 1.17 AT4G16790.1
AT4G16790
hydroxyproline-rich glycoprotein family protein
Chr5_-_1731090 1.16 AT5G05760.1
SYP31
syntaxin of plants 31
Chr5_-_22481915 1.16 AT5G55490.1
AT5G55490.7
AT5G55490.5
AT5G55490.4
AT5G55490.8
AT5G55490.3
GEX1
gamete expressed protein 1
Chr3_+_20005616 1.15 AT3G54020.1
AtIPCS1
Inositol phosphorylceramide synthase 1
Chr5_-_2195883 1.14 AT5G07060.1
AT5G07060.2
MAC5C
CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
Chr5_-_1566391 1.12 AT5G05280.1
AT5G05280
RING/U-box superfamily protein
Chr1_+_10654800 1.12 AT1G30270.1
AT1G30270.2
AT1G30270.3
CIPK23
CBL-interacting protein kinase 23
Chr2_-_12510552 1.10 AT2G29110.1
AT2G29110.2
GLR2.8
glutamate receptor 2.8
Chr4_+_12488040 1.09 AT4G24040.1
TRE1
trehalase 1
Chr1_+_28561281 1.07 AT1G76130.1
AMY2
alpha-amylase-like 2
Chr1_-_22712210 1.07 AT1G61560.4
AT1G61560.3
AT1G61560.2
AT1G61560.9
AT1G61560.10
AT1G61560.8
AT1G61560.5
AT1G61560.1
AT1G61560.6
AT1G61560.7
MLO6
Seven transmembrane MLO family protein
Chr1_-_26550636 1.07 AT1G70440.1
AT1G70440.2
SRO3
similar to RCD one 3
Chr2_-_11233295 1.07 AT2G26400.1
AT2G26400.4
AT2G26400.2
AT2G26400.3
ARD3
acireductone dioxygenase 3
Chr5_+_16431304 1.05 AT5G41040.1
AT5G41040.2
RWP1
HXXXD-type acyl-transferase family protein
Chr1_-_20015038 1.05 AT1G53625.1
AT1G53625
hypothetical protein
Chr5_+_3509833 1.05 AT5G11060.1
KNAT4
homeobox protein knotted-1-like 4
Chr2_-_7919345 1.04 AT2G18193.1
AT2G18193
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_28560629 1.04 AT1G76130.2
AMY2
alpha-amylase-like 2
Chr2_+_7406911 1.04 AT2G17040.1
NAC036
NAC domain containing protein 36
Chr2_-_13800099 1.03 AT2G32510.1
MAPKKK17
mitogen-activated protein kinase kinase kinase 17
Chr4_-_10612135 1.02 AT4G19460.1
AT4G19460
UDP-Glycosyltransferase superfamily protein
Chr2_-_14394858 1.01 AT2G34080.1
AT2G34080
Cysteine proteinases superfamily protein
Chr5_-_4423095 1.01 AT5G13700.1
PAO1
polyamine oxidase 1
Chr4_-_9428894 1.01 AT4G16760.1
AT4G16760.2
ACX1
acyl-CoA oxidase 1
Chr1_+_267993 0.99 AT1G01720.1
ATAF1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr2_-_12666113 0.97 AT2G29620.2
AT2G29620.1
AT2G29620.4
AT2G29620.3
AT2G29620
dentin sialophosphoprotein
Chr5_+_661936 0.96 AT5G02880.2
AT5G02880.1
UPL4
ubiquitin-protein ligase 4
Chr5_-_22481148 0.96 AT5G55490.9
AT5G55490.6
AT5G55490.2
GEX1
gamete expressed protein 1
Chr1_+_23563315 0.95 AT1G63530.4
AT1G63530.3
AT1G63530.2
AT1G63530.1
AT1G63530
hypothetical protein
Chr1_+_29121226 0.94 AT1G77500.1
AT1G77500
DUF630 family protein, putative (DUF630 and DUF632)
Chr5_-_5990681 0.93 AT5G18110.1
NCBP
Putative cap-binding protein
Chr4_-_8283263 0.92 AT4G14370.1
AT4G14370.3
AT4G14370.2
AT4G14370
Disease resistance protein (TIR-NBS-LRR class) family
Chr3_-_5066745 0.91 AT3G15040.1
AT3G15040
senescence regulator (Protein of unknown function, DUF584)
Chr4_+_626069 0.91 AT4G01480.1
PPa5
pyrophosphorylase 5
Chr1_-_24395503 0.90 AT1G65610.1
KOR2
Six-hairpin glycosidases superfamily protein
Chr4_+_626220 0.88 AT4G01480.2
PPa5
pyrophosphorylase 5
Chr2_+_9645270 0.87 AT2G22680.1
WAVH1
Zinc finger (C3HC4-type RING finger) family protein
Chr4_+_8821651 0.87 AT4G15417.2
AT4G15417.1
RTL1
RNAse II-like 1
Chr1_-_29957201 0.86 AT1G79610.1
NHX6
Na+/H+ antiporter 6
Chr5_-_20833815 0.86 AT5G51260.1
AT5G51260.2
AT5G51260
HAD superfamily, subfamily IIIB acid phosphatase
Chr3_-_19802328 0.84 AT3G53410.1
LUL2
RING/U-box superfamily protein
Chr4_-_15339613 0.84 AT4G31670.1
UBP18
ubiquitin-specific protease 18
Chr4_+_10022205 0.84 AT4G18050.1
ABCB9
P-glycoprotein 9
Chr4_+_10021786 0.84 AT4G18050.2
ABCB9
P-glycoprotein 9
Chr3_+_270221 0.82 AT3G01750.1
AT3G01750.2
AT3G01750
Ankyrin repeat family protein
Chr2_+_3618058 0.82 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_+_24752783 0.81 AT5G61560.1
AT5G61560.3
AT5G61560.2
AT5G61560
U-box domain-containing protein kinase family protein
Chr2_-_4018046 0.80 AT2G10440.1
AT2G10440.2
AT2G10440
mediator of RNA polymerase II transcription subunit
Chr3_+_3455355 0.80 AT3G11020.1
DREB2B
DRE/CRT-binding protein 2B
Chr4_+_7071672 0.79 AT4G11740.1
AT4G11740.2
SAY1
Ubiquitin-like superfamily protein
Chr4_+_14920376 0.79 AT4G30530.1
GGP1
Class I glutamine amidotransferase-like superfamily protein
Chr5_+_1360589 0.78 AT5G04720.1
ADR1-L2
ADR1-like 2
Chr3_+_19755689 0.78 AT3G53280.1
CYP71B5
cytochrome p450 71b5
Chr3_+_8254559 0.78 AT3G23150.1
AT3G23150.2
ETR2
Signal transduction histidine kinase, hybrid-type, ethylene sensor
Chr5_+_24753180 0.78 AT5G61560.4
AT5G61560.5
AT5G61560
U-box domain-containing protein kinase family protein
Chr4_-_1197630 0.78 AT4G02710.1
NET1C
Kinase interacting (KIP1-like) family protein
Chr5_-_24634696 0.77 AT5G61250.3
GUS1
glucuronidase 1
Chr3_+_22804998 0.76 AT3G61630.1
CRF6
cytokinin response factor 6
Chr5_-_3322910 0.75 AT5G10520.1
AT5G10520.2
RBK1
ROP binding protein kinases 1
Chr1_-_29869784 0.75 AT1G79410.1
OCT5
organic cation/carnitine transporter5
Chr5_-_10045882 0.75 AT5G28050.2
AT5G28050.1
AT5G28050.3
AT5G28050
Cytidine/deoxycytidylate deaminase family protein
Chr1_-_21553085 0.74 AT1G58200.1
MSL3
MSCS-like 3
Chr5_-_24634884 0.74 AT5G61250.1
GUS1
glucuronidase 1
Chr1_-_7978810 0.74 AT1G22570.1
AT1G22570
Major facilitator superfamily protein
Chr1_-_21553266 0.73 AT1G58200.2
MSL3
MSCS-like 3
Chr4_-_15934762 0.73 AT4G33020.2
ZIP9
ZIP metal ion transporter family
Chr1_+_10010124 0.73 AT1G28470.1
NAC010
NAC domain containing protein 10
Chr4_-_15934313 0.72 AT4G33020.1
ZIP9
ZIP metal ion transporter family
Chr2_-_12665828 0.72 AT2G29620.6
AT2G29620.5
AT2G29620
dentin sialophosphoprotein
Chr5_-_103770 0.72 AT5G01250.1
AT5G01250
alpha 1,4-glycosyltransferase family protein
Chr1_-_7978447 0.71 AT1G22570.2
AT1G22570
Major facilitator superfamily protein
Chr4_+_12514899 0.70 AT4G24100.2
AT4G24100.1
AT4G24100.3
AT4G24100.4
AT4G24100
Protein kinase superfamily protein
Chr5_-_24635312 0.69 AT5G61250.2
GUS1
glucuronidase 1
Chr1_+_26204805 0.68 AT1G69680.1
AT1G69680
ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)
Chr4_-_12023467 0.68 AT4G22940.1
AT4G22940.2
AT4G22940
Protein kinase superfamily protein
Chr3_+_3387078 0.67 AT3G10820.1
AT3G10820.2
AT3G10820
Transcription elongation factor (TFIIS) family protein
Chr4_+_12539656 0.66 AT4G24160.1
AT4G24160.2
AT4G24160
alpha/beta-Hydrolases superfamily protein
Chr4_-_12170055 0.66 AT4G23260.1
AT4G23260.2
CRK18
cysteine-rich RLK (RECEPTOR-like protein kinase) 18
Chr3_+_4586151 0.65 AT3G13900.2
AT3G13900.3
AT3G13900
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr1_+_18305445 0.64 AT1G49450.1
AT1G49450
Transducin/WD40 repeat-like superfamily protein
Chr5_+_22786496 0.64 AT5G56290.1
PEX5
peroxin 5
Chr1_-_4034155 0.63 AT1G11940.1
AT1G11940.2
AT1G11940
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr3_-_17716326 0.62 AT3G47990.2
AT3G47990.4
AT3G47990.3
AT3G47990.1
SIS3
SUGAR-INSENSITIVE 3
Chr2_+_13170779 0.61 AT2G30942.1
AT2G30942
transmembrane protein, putative (DUF3317)
Chr1_-_10720843 0.61 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr4_-_17564763 0.61 AT4G37330.1
CYP81D4
cytochrome P450, family 81, subfamily D, polypeptide 4
Chr1_+_25543949 0.60 AT1G68150.1
WRKY9
WRKY DNA-binding protein 9
Chr3_-_7452003 0.60 AT3G21230.4
AT3G21230.3
AT3G21230.2
AT3G21230.1
4CL5
4-coumarate:CoA ligase 5
Chr4_-_433938 0.59 AT4G01000.2
AT4G01000.1
AT4G01000
Ubiquitin-like superfamily protein
Chr1_+_20757767 0.58 AT1G55570.1
sks12
SKU5 similar 12
Chr2_-_17992047 0.57 AT2G43290.1
MSS3
Calcium-binding EF-hand family protein
Chr4_-_14477935 0.57 AT4G29440.2
AT4G29440.1
AT4G29440
Regulator of Vps4 activity in the MVB pathway protein
Chr1_+_707485 0.56 AT1G03050.1
AT1G03050
ENTH/ANTH/VHS superfamily protein
Chr3_-_5358427 0.54 AT3G15840.4
AT3G15840.2
AT3G15840.3
AT3G15840.5
AT3G15840.1
PIFI
post-illumination chlorophyll fluorescence increase
Chr5_+_2569098 0.54 AT5G08010.1
AT5G08010
hypothetical protein
Chr1_+_18658508 0.54 AT1G50370.1
FYPP1
Calcineurin-like metallo-phosphoesterase superfamily protein
Chr3_-_15763330 0.53 AT3G43930.1
AT3G43930.3
AT3G43930.2
AT3G43930
BRCT domain-containing DNA repair protein
Chr2_-_3312651 0.53 AT2G07687.1
AT2G07687
Cytochrome c oxidase, subunit III
Chr5_-_3036596 0.53 AT5G09770.1
AT5G09770
Ribosomal protein L17 family protein
Chr3_-_7190648 0.52 AT3G20580.1
COBL10
COBRA-like protein 10 precursor
Chr3_-_8890927 0.52 AT3G24460.1
AT3G24460
Serinc-domain containing serine and sphingolipid biosynthesis protein
Chr5_+_23759003 0.52 AT5G58840.3
AT5G58840.2
AT5G58840.1
AT5G58840
Subtilase family protein
Chr4_-_916509 0.50 AT4G02075.2
AT4G02075.3
AT4G02075.1
PIT1
RING/FYVE/PHD zinc finger superfamily protein
Chr1_+_24472873 0.50 AT1G65800.1
AT1G65800.2
RK2
receptor kinase 2
Chr4_-_8278810 0.49 AT4G14368.2
AT4G14368.1
AT4G14368.4
AT4G14368.3
AT4G14368
Regulator of chromosome condensation (RCC1) family protein
Chr5_-_3224788 0.48 AT5G10270.1
CDKC%3B1
cyclin-dependent kinase C;1
Chr3_-_17715467 0.48 AT3G47990.5
SIS3
SUGAR-INSENSITIVE 3
Chr1_-_8425385 0.48 AT1G23840.1
AT1G23840
transmembrane protein
Chr1_+_7421148 0.48 AT1G21200.2
AT1G21200.1
AT1G21200
sequence-specific DNA binding transcription factor
Chr4_-_8794433 0.47 AT4G15390.1
AT4G15390.2
AT4G15390
HXXXD-type acyl-transferase family protein
Chr2_-_11968712 0.46 AT2G28085.1
AT2G28085
SAUR-like auxin-responsive protein family
Chr3_+_19832448 0.45 AT3G53490.1
AT3G53490
valine-tRNA ligase
Chr3_-_22158725 0.45 AT3G59990.3
AT3G59990.1
AT3G59990.2
MAP2B
methionine aminopeptidase 2B
Chr4_+_1311198 0.45 AT4G02950.1
AT4G02950
Ubiquitin family protein
Chr4_+_2445775 0.45 AT4G04830.1
AT4G04830.2
MSRB5
methionine sulfoxide reductase B5
Chr5_-_17629363 0.44 AT5G43850.1
ARD4
RmlC-like cupins superfamily protein
Chr1_+_28234086 0.44 AT1G75230.2
AT1G75230.1
AT1G75230
DNA glycosylase superfamily protein
Chr2_-_12504912 0.43 AT2G29100.1
AT2G29100.2
GLR2.9
glutamate receptor 2.9
Chr3_+_18929526 0.43 AT3G50930.1
BCS1
cytochrome BC1 synthesi
Chr1_+_9241036 0.41 AT1G26730.1
AT1G26730.2
AT1G26730
EXS (ERD1/XPR1/SYG1) family protein
Chr2_+_8575785 0.41 AT2G19870.1
AT2G19870
tRNA/rRNA methyltransferase (SpoU) family protein
Chr2_-_14190254 0.41 AT2G33500.1
AT2G33500.2
BBX12
B-box type zinc finger protein with CCT domain-containing protein
Chr5_-_14605310 0.41 AT5G36970.1
NHL25
NDR1/HIN1-like 25

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G19040

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.6 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.9 2.6 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.7 2.2 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.7 2.0 GO:0002215 defense response to nematode(GO:0002215)
0.7 2.6 GO:0033306 phytol metabolic process(GO:0033306)
0.5 2.9 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.4 3.1 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.4 5.1 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.4 1.8 GO:0018874 benzoate metabolic process(GO:0018874)
0.3 1.6 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.3 1.8 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.3 1.5 GO:0019509 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.2 1.0 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.2 1.0 GO:0046208 spermine catabolic process(GO:0046208)
0.2 0.6 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.2 5.1 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 5.8 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.1 0.9 GO:1990118 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.1 0.5 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.1 1.4 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.4 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.1 0.3 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.1 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 1.6 GO:0006826 iron ion transport(GO:0006826)
0.1 1.1 GO:0007584 response to nutrient(GO:0007584)
0.1 1.6 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 1.1 GO:0046352 disaccharide catabolic process(GO:0046352)
0.1 1.6 GO:0010227 floral organ abscission(GO:0010227)
0.1 0.8 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.1 0.7 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.1 1.0 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.1 3.6 GO:0042538 hyperosmotic salinity response(GO:0042538)
0.1 0.2 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 1.3 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 0.5 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 1.1 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 1.1 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.0 0.9 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.0 0.1 GO:0090548 response to nitrate starvation(GO:0090548) nitrate import(GO:1902025)
0.0 7.7 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 1.0 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.5 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 1.8 GO:0048544 recognition of pollen(GO:0048544)
0.0 1.6 GO:0006865 amino acid transport(GO:0006865)
0.0 2.6 GO:0009615 response to virus(GO:0009615)
0.0 1.1 GO:0009756 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.0 0.7 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.9 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.0 0.1 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.0 1.2 GO:0048278 vesicle docking(GO:0048278)
0.0 0.1 GO:0045860 positive regulation of protein kinase activity(GO:0045860)
0.0 0.3 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 0.4 GO:0006817 phosphate ion transport(GO:0006817)
0.0 1.1 GO:0055046 microgametogenesis(GO:0055046)
0.0 0.5 GO:0030091 protein repair(GO:0030091)
0.0 1.9 GO:0042594 response to starvation(GO:0042594)
0.0 0.8 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 1.0 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.1 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.0 2.4 GO:0050832 defense response to fungus(GO:0050832)
0.0 0.8 GO:0016579 protein deubiquitination(GO:0016579)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.5 GO:0017119 Golgi transport complex(GO:0017119)
0.2 1.1 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 0.9 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.5 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 0.7 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 2.7 GO:0090406 pollen tube(GO:0090406)
0.0 1.1 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 1.2 GO:0009504 cell plate(GO:0009504)
0.0 0.2 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.8 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 5.8 GO:0005802 trans-Golgi network(GO:0005802)
0.0 1.1 GO:0005887 integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.6 1.8 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.5 2.1 GO:0004556 alpha-amylase activity(GO:0004556)
0.5 5.4 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.4 3.1 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.4 1.1 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.4 1.5 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.4 2.6 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.3 1.0 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.3 1.3 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.3 1.6 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.3 2.2 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.3 1.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.3 1.8 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.2 2.4 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.2 0.9 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.2 1.6 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.2 0.8 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.2 2.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.2 1.6 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.2 0.6 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.2 0.8 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.2 5.1 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 0.4 GO:0032131 alkylated DNA binding(GO:0032131)
0.1 2.3 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 1.4 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 1.0 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 1.2 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 2.3 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 1.8 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 2.2 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.1 1.1 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 0.7 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 3.5 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.1 1.1 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 1.0 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 1.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 1.3 GO:0015248 sterol transporter activity(GO:0015248)
0.1 6.3 GO:0004601 peroxidase activity(GO:0004601)
0.1 0.6 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 0.2 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 0.9 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 1.1 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 1.2 GO:0008810 cellulase activity(GO:0008810)
0.0 0.9 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.5 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 2.9 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 1.1 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 1.1 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.3 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.3 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.4 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 1.8 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 1.2 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.4 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.1 GO:0001653 peptide receptor activity(GO:0001653)
0.0 1.0 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 5.5 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 0.1 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.0 0.5 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.3 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle