GSE43616: Time-course of wild-type Arabidopsis leaf
Gene Symbol | Gene ID | Gene Info |
---|---|---|
AT1G19040
|
AT1G19040 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
AT1G19040 | arTal_v1_Chr1_+_6576077_6576077 | 0.48 | 1.0e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
arTal_v1_Chr1_+_25765718_25765718 Show fit | 3.54 |
AT1G68620.1
|
alpha/beta-Hydrolases superfamily protein |
|
arTal_v1_Chr3_-_2699257_2699257 Show fit | 2.95 |
AT3G08860.2
|
PYRIMIDINE 4 |
|
arTal_v1_Chr3_-_21189859_21189967 Show fit | 2.89 |
AT3G57260.1
AT3G57260.2 |
beta-1,3-glucanase 2 |
|
arTal_v1_Chr3_-_2699420_2699420 Show fit | 2.87 |
AT3G08860.1
|
PYRIMIDINE 4 |
|
arTal_v1_Chr3_-_19643276_19643282 Show fit | 2.72 |
AT3G52970.1
AT3G52970.2 |
cytochrome P450, family 76, subfamily G, polypeptide 1 |
|
arTal_v1_Chr4_+_12461907_12461907 Show fit | 2.72 |
AT4G24000.1
|
cellulose synthase like G2 |
|
arTal_v1_Chr1_+_21652988_21652988 Show fit | 2.62 |
AT1G58340.1
|
MATE efflux family protein |
|
arTal_v1_Chr3_+_9892791_9892791 Show fit | 2.60 |
AT3G26840.1
|
Esterase/lipase/thioesterase family protein |
|
arTal_v1_Chr3_-_1063103_1063234 Show fit | 2.58 |
AT3G04070.2
AT3G04070.1 |
NAC domain containing protein 47 |
|
arTal_v1_Chr2_+_18558885_18558938 Show fit | 2.55 |
AT2G44990.2
AT2G44990.3 AT2G44990.1 |
carotenoid cleavage dioxygenase 7 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.7 | GO:0071456 | cellular response to hypoxia(GO:0071456) |
0.1 | 5.8 | GO:0043562 | cellular response to nitrogen levels(GO:0043562) |
0.4 | 5.1 | GO:0001676 | long-chain fatty acid metabolic process(GO:0001676) |
0.2 | 5.1 | GO:0009833 | plant-type primary cell wall biogenesis(GO:0009833) |
0.1 | 3.6 | GO:0042538 | hyperosmotic salinity response(GO:0042538) |
0.4 | 3.1 | GO:0045487 | diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487) |
0.5 | 2.9 | GO:0006654 | phosphatidic acid biosynthetic process(GO:0006654) |
0.9 | 2.6 | GO:0033240 | positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764) |
0.9 | 2.6 | GO:0016118 | tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124) |
0.7 | 2.6 | GO:0033306 | phytol metabolic process(GO:0033306) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.8 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.0 | 2.7 | GO:0090406 | pollen tube(GO:0090406) |
0.3 | 2.5 | GO:0017119 | Golgi transport complex(GO:0017119) |
0.0 | 1.2 | GO:0009504 | cell plate(GO:0009504) |
0.2 | 1.1 | GO:0071012 | U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012) |
0.0 | 1.1 | GO:0031228 | integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228) |
0.0 | 1.1 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
0.1 | 0.9 | GO:0016281 | eukaryotic translation initiation factor 4F complex(GO:0016281) |
0.0 | 0.8 | GO:0005778 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
0.0 | 0.7 | GO:0000176 | nuclear exosome (RNase complex)(GO:0000176) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.3 | GO:0004601 | peroxidase activity(GO:0004601) |
0.0 | 5.5 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.5 | 5.4 | GO:0008453 | alanine-glyoxylate transaminase activity(GO:0008453) |
0.2 | 5.1 | GO:0016760 | cellulose synthase (UDP-forming) activity(GO:0016760) |
0.1 | 3.5 | GO:0080030 | methyl indole-3-acetate esterase activity(GO:0080030) |
0.4 | 3.1 | GO:0045543 | gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634) |
0.0 | 2.9 | GO:0015171 | amino acid transmembrane transporter activity(GO:0015171) |
0.4 | 2.6 | GO:0045549 | 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549) |
0.2 | 2.6 | GO:0004144 | diacylglycerol O-acyltransferase activity(GO:0004144) |
0.2 | 2.4 | GO:0010294 | abscisic acid glucosyltransferase activity(GO:0010294) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE | Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle |