Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT1G16490

Z-value: 1.92

Transcription factors associated with AT1G16490

Gene Symbol Gene ID Gene Info
AT1G16490
AT1G16490 myb domain protein 58

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB58arTal_v1_Chr1_-_5630476_56304760.524.9e-03Click!

Activity profile of AT1G16490 motif

Sorted Z-values of AT1G16490 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_4312103 13.74 AT2G10940.2
AT2G10940.1
AT2G10940
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_19648362 11.77 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_18098633 11.34 AT4G38770.1
PRP4
proline-rich protein 4
Chr3_+_10255906 10.93 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
Chr3_-_197974 9.55 AT3G01500.1
CA1
carbonic anhydrase 1
Chr3_-_198160 9.47 AT3G01500.2
CA1
carbonic anhydrase 1
Chr3_-_198664 9.41 AT3G01500.3
CA1
carbonic anhydrase 1
Chr2_-_16950705 9.37 AT2G40610.1
EXPA8
expansin A8
Chr3_-_197564 9.34 AT3G01500.4
CA1
carbonic anhydrase 1
Chr4_-_17777445 8.58 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr1_-_20648891 8.56 AT1G55330.1
AGP21
arabinogalactan protein 21
Chr2_+_14577083 8.53 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr4_+_18291218 8.51 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
Chr3_-_11013451 7.88 AT3G29030.1
EXPA5
expansin A5
Chr4_+_14215473 7.80 AT4G28780.1
AT4G28780
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_8589754 7.33 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr4_+_2449434 7.27 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr5_+_4087689 7.19 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr5_+_18634041 7.16 AT5G45950.1
AT5G45950
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_7796310 7.10 AT3G22120.1
AT3G22120.2
CWLP
cell wall-plasma membrane linker protein
Chr3_+_23345754 6.90 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr5_+_18528267 6.77 AT5G45670.1
AT5G45670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_4001113 6.77 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
Chr1_+_9740508 6.70 AT1G27950.1
LTPG1
glycosylphosphatidylinositol-anchored lipid protein transfer 1
Chr2_+_17592038 6.53 AT2G42220.1
AT2G42220
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr3_-_6882235 6.51 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Chr3_+_251868 6.39 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
Chr3_-_4744263 6.39 AT3G14240.1
AT3G14240
Subtilase family protein
Chr1_+_17918207 6.37 AT1G48480.1
RKL1
receptor-like kinase 1
Chr2_-_15137012 6.28 AT2G36050.1
OFP15
ovate family protein 15
Chr2_-_17827648 6.18 AT2G42840.1
PDF1
protodermal factor 1
Chr1_+_907523 6.16 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
Chr4_+_11202728 6.14 AT4G20940.1
GHR1
Leucine-rich receptor-like protein kinase family protein
Chr1_+_27452748 6.11 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr3_-_16448844 6.07 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr5_-_18371021 6.06 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr3_+_5358601 6.06 AT3G15850.1
FAD5
fatty acid desaturase 5
Chr4_+_620691 5.95 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_+_1594588 5.89 AT2G04570.1
AT2G04570
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_19595834 5.76 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr1_+_10149791 5.75 AT1G29070.1
AT1G29070
Ribosomal protein L34
Chr5_-_23308680 5.72 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr4_-_8307934 5.70 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr3_-_15617149 5.69 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_671687 5.69 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
Chr5_-_779424 5.65 AT5G03260.1
LAC11
laccase 11
Chr1_+_13208683 5.64 AT1G35680.1
RPL21C
Ribosomal protein L21
Chr3_-_15617309 5.64 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_5058583 5.61 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr5_-_6842946 5.52 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr3_+_8586359 5.51 AT3G23805.1
RALFL24
ralf-like 24
Chr1_+_11532199 5.50 AT1G32060.1
PRK
phosphoribulokinase
Chr2_+_6542166 5.50 AT2G15090.1
KCS8
3-ketoacyl-CoA synthase 8
Chr1_-_6999839 5.49 AT1G20190.1
EXPA11
expansin 11
Chr1_+_418726 5.49 AT1G02205.4
AT1G02205.3
AT1G02205.5
AT1G02205.1
CER1
Fatty acid hydroxylase superfamily
Chr1_-_26515188 5.47 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr3_-_373805 5.41 AT3G02110.1
scpl25
serine carboxypeptidase-like 25
Chr5_-_990630 5.39 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
Chr5_+_16468327 5.35 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
Chr5_-_20712386 5.32 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_10477885 5.26 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr1_+_16575759 5.24 AT1G43790.1
TED6
tracheary element differentiation-related 6
Chr2_+_6399621 5.22 AT2G14890.2
AGP9
arabinogalactan protein 9
Chr1_-_22317070 5.19 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr5_-_21068327 5.14 AT5G51820.1
PGM
phosphoglucomutase
Chr1_-_6999523 5.13 AT1G20190.2
EXPA11
expansin 11
Chr2_-_14322082 5.04 AT2G33850.1
AT2G33850
E6-like protein
Chr2_-_12173951 5.04 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr1_-_1063809 5.04 AT1G04110.1
SDD1
Subtilase family protein
Chr1_+_23911024 5.02 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr2_+_12014412 5.01 AT2G28190.1
CSD2
copper/zinc superoxide dismutase 2
Chr1_+_26141726 4.99 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr2_+_14427509 4.96 AT2G34170.3
AT2G34170.2
AT2G34170.1
AT2G34170.4
AT2G34170.5
AT2G34170.6
AT2G34170
hypothetical protein (DUF688)
Chr5_-_8707885 4.88 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
Chr4_-_10278794 4.88 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
Chr1_-_11548016 4.87 AT1G32100.1
PRR1
pinoresinol reductase 1
Chr1_-_3518035 4.84 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr2_+_6399405 4.81 AT2G14890.1
AGP9
arabinogalactan protein 9
Chr5_-_25629615 4.80 AT5G64040.2
AT5G64040.1
PSAN
photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Chr3_+_20780175 4.80 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
Chr4_+_160643 4.77 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr1_-_20803449 4.74 AT1G55670.1
PSAG
photosystem I subunit G
Chr2_-_19617681 4.72 AT2G47930.1
AGP26
arabinogalactan protein 26
Chr3_+_5116021 4.72 AT3G15190.1
PRPS20
chloroplast 30S ribosomal protein S20
Chr5_-_8916856 4.71 AT5G25610.1
RD22
BURP domain-containing protein
Chr4_+_14304921 4.69 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
Chr1_-_6579314 4.67 AT1G19050.1
ARR7
response regulator 7
Chr4_-_1268612 4.66 AT4G02850.1
AT4G02850
phenazine biosynthesis PhzC/PhzF family protein
Chr1_-_19978048 4.66 AT1G53520.1
FAP3
Chalcone-flavanone isomerase family protein
Chr1_+_25374072 4.65 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
Chr3_+_19713799 4.64 AT3G53190.1
AT3G53190
Pectin lyase-like superfamily protein
Chr3_+_16386395 4.64 AT3G44890.1
RPL9
ribosomal protein L9
Chr4_-_13398307 4.64 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr2_+_15445294 4.63 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr5_-_20940895 4.62 AT5G51550.1
EXL3
EXORDIUM like 3
Chr3_-_5854906 4.58 AT3G17170.1
RFC3
Translation elongation factor EF1B/ribosomal protein S6 family protein
Chr2_-_14125526 4.57 AT2G33330.1
PDLP3
plasmodesmata-located protein 3
Chr1_-_29485389 4.54 AT1G78370.1
GSTU20
glutathione S-transferase TAU 20
Chr2_+_10662190 4.47 AT2G25060.1
ENODL14
early nodulin-like protein 14
Chr1_-_8559066 4.47 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr3_+_6154363 4.47 AT3G18000.1
XPL1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_26538437 4.47 AT1G70410.2
BCA4
beta carbonic anhydrase 4
Chr5_+_24167996 4.46 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
Chr5_-_345457 4.45 AT5G01890.1
AT5G01890
Leucine-rich receptor-like protein kinase family protein
Chr2_+_11926446 4.45 AT2G28000.1
CPN60A
chaperonin-60alpha
Chr1_-_8235019 4.44 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_28603932 4.38 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr5_-_2182538 4.38 AT5G07020.1
AT5G07020
proline-rich family protein
Chr1_+_18290942 4.36 AT1G49430.1
AT1G49430.2
LACS2
long-chain acyl-CoA synthetase 2
Chr2_-_1824480 4.33 AT2G05100.1
AT2G05100.2
LHCB2.1
photosystem II light harvesting complex protein 2.1
Chr1_-_26537422 4.32 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
Chr2_-_11173278 4.32 AT2G26250.1
KCS10
3-ketoacyl-CoA synthase 10
Chr2_-_12785037 4.32 AT2G29980.2
FAD3
fatty acid desaturase 3
Chr1_+_418416 4.30 AT1G02205.2
CER1
Fatty acid hydroxylase superfamily
Chr1_-_25833966 4.29 AT1G68780.1
AT1G68780
RNI-like superfamily protein
Chr5_+_13830429 4.27 AT5G35630.1
GS2
glutamine synthetase 2
Chr5_+_13831020 4.27 AT5G35630.2
GS2
glutamine synthetase 2
Chr5_+_13830746 4.26 AT5G35630.3
GS2
glutamine synthetase 2
Chr2_-_12785190 4.26 AT2G29980.1
FAD3
fatty acid desaturase 3
Chr4_+_13133402 4.25 AT4G25830.1
AT4G25830
Uncharacterized protein family (UPF0497)
Chr5_+_5431584 4.24 AT5G16590.1
AT5G16590
Leucine-rich repeat protein kinase family protein
Chr3_+_20196329 4.24 AT3G54560.2
HTA11
histone H2A 11
Chr2_-_5051613 4.23 AT2G12462.1
AT2G12462
sterile alpha motif (SAM) domain protein
Chr3_+_10505711 4.21 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
Chr1_+_27188036 4.20 AT1G72230.1
AT1G72230
Cupredoxin superfamily protein
Chr3_+_20196140 4.15 AT3G54560.1
HTA11
histone H2A 11
Chr3_+_6752422 4.15 AT3G19480.1
AT3G19480
D-3-phosphoglycerate dehydrogenase
Chr2_-_18914739 4.13 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr5_+_7529292 4.10 AT5G22640.3
AT5G22640.1
AT5G22640.2
emb1211
MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein
Chr2_+_7301334 4.09 AT2G16850.1
PIP2%3B8
plasma membrane intrinsic protein 2;8
Chr4_+_901375 4.09 AT4G02060.1
PRL
Minichromosome maintenance (MCM2/3/5) family protein
Chr5_+_15421573 4.09 AT5G38520.2
AT5G38520
alpha/beta-Hydrolases superfamily protein
Chr2_+_15934244 4.09 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
Chr5_+_15421289 4.07 AT5G38520.1
AT5G38520
alpha/beta-Hydrolases superfamily protein
Chr3_+_957112 4.06 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
Chr4_-_8016582 4.06 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
Chr1_-_11872926 4.05 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
Chr3_+_2612175 4.05 AT3G08600.1
AT3G08600
transmembrane protein, putative (DUF1191)
Chr5_-_7419335 4.04 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr4_+_10949573 4.04 AT4G20270.1
BAM3
Leucine-rich receptor-like protein kinase family protein
Chr1_+_20101299 4.03 AT1G53840.1
PME1
pectin methylesterase 1
Chr3_+_956862 4.01 AT3G03780.2
MS2
methionine synthase 2
Chr1_+_568558 3.98 AT1G02650.2
AT1G02650.1
AT1G02650
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_9255083 3.97 AT3G25500.1
AFH1
formin homology 1
Chr1_+_4934120 3.95 AT1G14430.1
AT1G14430
glyoxal oxidase-related protein
Chr3_+_9460433 3.94 AT3G25860.1
LTA2
2-oxoacid dehydrogenases acyltransferase family protein
Chr1_+_17065858 3.93 AT1G45130.2
BGAL5
beta-galactosidase 5
Chr5_+_24240810 3.93 AT5G60200.1
TMO6
TARGET OF MONOPTEROS 6
Chr1_-_12878835 3.93 AT1G35180.1
AT1G35180
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Chr1_-_8501542 3.92 AT1G24020.1
MLP423
MLP-like protein 423
Chr3_-_18834834 3.92 AT3G50685.1
AT3G50685
anti-muellerian hormone type-2 receptor
Chr3_+_3012094 3.92 AT3G09820.2
ADK1
adenosine kinase 1
Chr3_+_3011780 3.90 AT3G09820.1
ADK1
adenosine kinase 1
Chr1_-_19101265 3.89 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
Chr5_+_22530007 3.89 AT5G55620.1
AT5G55620
hypothetical protein
Chr3_+_5676749 3.87 AT3G16660.2
AT3G16660.1
AT3G16660
Pollen Ole e 1 allergen and extensin family protein
Chr1_-_6421188 3.87 AT1G18650.1
AT1G18650.2
PDCB3
plasmodesmata callose-binding protein 3
Chr2_+_11856571 3.84 AT2G27820.1
PD1
prephenate dehydratase 1
Chr3_+_1225919 3.83 AT3G04550.1
AT3G04550
rubisco accumulation factor-like protein
Chr4_+_900636 3.81 AT4G02060.2
PRL
Minichromosome maintenance (MCM2/3/5) family protein
Chr5_-_16061043 3.81 AT5G40150.1
AT5G40150
Peroxidase superfamily protein
Chr2_-_13672781 3.81 AT2G32180.2
PTAC18
plastid transcriptionally active 18
Chr1_+_17065111 3.80 AT1G45130.1
BGAL5
beta-galactosidase 5
Chr3_-_2664834 3.79 AT3G08770.2
AT3G08770.1
LTP6
lipid transfer protein 6
Chr4_+_8520819 3.79 AT4G14890.1
FdC1
2Fe-2S ferredoxin-like superfamily protein
Chr1_+_19879405 3.77 AT1G53300.1
TTL1
tetratricopetide-repeat thioredoxin-like 1
Chr4_-_16536224 3.77 AT4G34620.1
SSR16
small subunit ribosomal protein 16
Chr1_+_5249760 3.76 AT1G15260.1
AT1G15260
LOW protein: ATP-dependent RNA helicase-like protein
Chr2_+_16658468 3.76 AT2G39900.1
WLIM2a
GATA type zinc finger transcription factor family protein
Chr2_+_12805667 3.75 AT2G30010.2
AT2G30010.1
TBL45
TRICHOME BIREFRINGENCE-LIKE 45
Chr3_-_19747114 3.75 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
Chr3_+_1813164 3.75 AT3G06020.1
FAF4
FANTASTIC four-like protein (DUF3049)
Chr3_-_15607606 3.74 AT3G43715.1
AT3G43715

Chr3_-_8872346 3.74 AT3G24430.1
HCF101
ATP binding protein
Chr1_-_8502065 3.73 AT1G24020.2
MLP423
MLP-like protein 423
Chr3_+_288741 3.71 AT3G01810.2
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr3_+_288538 3.70 AT3G01810.3
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr4_+_455768 3.66 AT4G01050.1
TROL
thylakoid rhodanese-like protein
Chr4_+_455583 3.65 AT4G01050.2
TROL
thylakoid rhodanese-like protein
Chr5_+_463073 3.64 AT5G02260.1
EXPA9
expansin A9
Chr3_+_288158 3.64 AT3G01810.1
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr2_+_19240131 3.63 AT2G46810.3
AT2G46810.2
AT2G46810.4
AT2G46810
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_4247218 3.63 AT1G12460.1
AT1G12460.2
AT1G12460
Leucine-rich repeat protein kinase family protein
Chr2_-_9224432 3.62 AT2G21540.2
AT2G21540.3
AT2G21540.4
AT2G21540.5
SFH3
SEC14-like 3
Chr4_-_9133161 3.61 AT4G16141.1
AT4G16141
GATA type zinc finger transcription factor family protein
Chr1_-_7040231 3.57 AT1G20330.1
SMT2
sterol methyltransferase 2
Chr2_+_11852078 3.56 AT2G27810.1
AT2G27810.3
AT2G27810.2
AT2G27810.4
NAT12
nucleobase-ascorbate transporter 12
Chr4_-_18538506 3.56 AT4G39970.1
AT4G39970
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_-_2137012 3.55 AT3G06770.1
AT3G06770.5
AT3G06770
Pectin lyase-like superfamily protein
Chr3_+_18514266 3.55 AT3G49940.1
LBD38
LOB domain-containing protein 38
Chr1_+_26093026 3.55 AT1G69420.2
AT1G69420.1
AT1G69420
DHHC-type zinc finger family protein
Chr5_+_22401927 3.54 AT5G55230.1
AT5G55230.3
AT5G55230.2
MAP65-1
microtubule-associated proteins 65-1
Chr4_-_8188811 3.53 AT4G14200.1
AT4G14200
Pentatricopeptide repeat (PPR) superfamily protein
Chr2_-_17161293 3.52 AT2G41170.2
AT2G41170.1
AT2G41170.3
AT2G41170
F-box family protein
Chr3_-_2137280 3.51 AT3G06770.4
AT3G06770.3
AT3G06770
Pectin lyase-like superfamily protein
Chr1_-_4217412 3.51 AT1G12380.1
AT1G12380
hypothetical protein
Chr1_-_6283348 3.51 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
Chr2_-_444324 3.50 AT2G01950.1
BRL2
BRI1-like 2
Chr5_+_24168245 3.50 AT5G60020.3
LAC17
laccase 17
Chr4_-_1230164 3.49 AT4G02770.1
PSAD-1
photosystem I subunit D-1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G16490

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.6 46.9 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
2.5 15.3 GO:1903428 photosynthesis, light harvesting in photosystem II(GO:0009769) positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
2.2 6.7 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
2.1 10.4 GO:0006169 adenosine salvage(GO:0006169) adenosine biosynthetic process(GO:0046086)
2.0 6.1 GO:0032414 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) cellular response to absence of light(GO:0071485) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
2.0 6.1 GO:0080051 cutin transport(GO:0080051)
2.0 12.0 GO:0043447 alkane biosynthetic process(GO:0043447)
1.9 7.5 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
1.9 13.1 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
1.7 5.0 GO:0071457 cellular response to ozone(GO:0071457)
1.7 11.6 GO:0006542 glutamine biosynthetic process(GO:0006542)
1.7 8.3 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
1.6 8.2 GO:0001578 microtubule bundle formation(GO:0001578)
1.6 8.1 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
1.6 3.1 GO:0071242 cellular response to ammonium ion(GO:0071242)
1.5 10.5 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
1.5 4.5 GO:0019695 choline metabolic process(GO:0019695)
1.3 3.9 GO:0042660 atrichoblast differentiation(GO:0010055) positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
1.2 22.0 GO:0006949 syncytium formation(GO:0006949)
1.2 4.6 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
1.0 10.0 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
1.0 7.9 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
1.0 6.8 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.9 4.7 GO:0042550 photosystem I stabilization(GO:0042550)
0.9 2.8 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.9 10.1 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.9 1.8 GO:0046085 adenosine metabolic process(GO:0046085)
0.9 2.7 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.9 2.7 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.9 3.6 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.9 3.6 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.9 3.5 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.9 23.5 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.9 7.8 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.9 3.5 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.9 0.9 GO:0046655 folic acid metabolic process(GO:0046655)
0.8 1.7 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.8 21.2 GO:0010025 wax biosynthetic process(GO:0010025)
0.8 2.5 GO:0071258 cellular response to gravity(GO:0071258)
0.8 2.4 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.8 4.0 GO:0051325 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.8 4.0 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.8 3.9 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.8 3.8 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.8 4.6 GO:0043478 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.7 3.0 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.7 6.7 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.7 2.2 GO:0080117 secondary growth(GO:0080117)
0.7 2.1 GO:0051099 positive regulation of binding(GO:0051099) regulation of DNA binding(GO:0051101)
0.7 2.1 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.7 0.7 GO:0071281 cellular response to iron ion(GO:0071281)
0.7 2.1 GO:0042148 DNA recombinase assembly(GO:0000730) strand invasion(GO:0042148)
0.7 6.7 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.7 2.0 GO:0032196 transposition(GO:0032196)
0.7 20.3 GO:0042335 cuticle development(GO:0042335)
0.6 8.4 GO:0044030 regulation of DNA methylation(GO:0044030)
0.6 1.9 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.6 1.9 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.6 6.4 GO:0010088 phloem development(GO:0010088)
0.6 7.6 GO:0030497 fatty acid elongation(GO:0030497)
0.6 1.2 GO:1990937 xylan acetylation(GO:1990937)
0.6 2.9 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.6 2.3 GO:1902475 L-alpha-amino acid transmembrane transport(GO:1902475)
0.6 5.2 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.6 1.7 GO:0035247 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.5 7.1 GO:0005987 sucrose catabolic process(GO:0005987)
0.5 6.9 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.5 3.1 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.5 1.5 GO:0040014 regulation of multicellular organism growth(GO:0040014) sepal giant cell differentiation(GO:0090392) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.5 2.4 GO:0009590 detection of gravity(GO:0009590)
0.5 1.4 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.5 7.0 GO:0010584 pollen exine formation(GO:0010584)
0.5 4.6 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.5 1.4 GO:0032990 cell part morphogenesis(GO:0032990) mitochondrion morphogenesis(GO:0070584)
0.5 2.3 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.4 3.1 GO:0072337 modified amino acid transport(GO:0072337)
0.4 1.7 GO:0032418 lysosome localization(GO:0032418)
0.4 2.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.4 2.1 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.4 1.3 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.4 1.3 GO:0042539 hypotonic salinity response(GO:0042539)
0.4 2.5 GO:0070982 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.4 1.7 GO:0090342 regulation of cell aging(GO:0090342)
0.4 9.6 GO:1905177 tracheary element differentiation(GO:1905177)
0.4 1.7 GO:0015675 nickel cation transport(GO:0015675)
0.4 4.1 GO:0009095 L-phenylalanine biosynthetic process(GO:0009094) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.4 24.6 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.4 2.1 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.4 2.0 GO:0018874 benzoate metabolic process(GO:0018874)
0.4 3.6 GO:0006549 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.4 3.5 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.4 1.6 GO:0031336 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.4 2.7 GO:0006552 leucine catabolic process(GO:0006552)
0.4 4.6 GO:0044000 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.4 3.4 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.4 1.1 GO:0034764 positive regulation of transmembrane transport(GO:0034764)
0.4 1.5 GO:0009270 response to humidity(GO:0009270)
0.4 1.8 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.4 4.3 GO:0006526 arginine biosynthetic process(GO:0006526)
0.4 1.8 GO:0010338 leaf formation(GO:0010338)
0.4 5.3 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.3 3.5 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.3 1.0 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.3 2.1 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.3 6.8 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.3 2.0 GO:0010587 miRNA catabolic process(GO:0010587)
0.3 4.6 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.3 1.6 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.3 0.9 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.3 1.9 GO:1900911 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.3 1.6 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.3 1.2 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.3 0.6 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.3 1.2 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.3 1.5 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.3 1.5 GO:0007043 cell-cell junction assembly(GO:0007043)
0.3 4.8 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.3 4.8 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.3 2.4 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.3 1.5 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.3 1.8 GO:0000719 photoreactive repair(GO:0000719)
0.3 5.0 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.3 1.2 GO:0010432 bract development(GO:0010432)
0.3 10.6 GO:0016131 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.3 0.9 GO:0031114 regulation of microtubule depolymerization(GO:0031114)
0.3 5.3 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.3 1.2 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.3 0.9 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.3 2.6 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.3 2.7 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.3 2.4 GO:0009799 specification of symmetry(GO:0009799)
0.3 3.2 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.3 3.7 GO:0048564 photosystem I assembly(GO:0048564)
0.3 1.3 GO:0035627 ceramide transport(GO:0035627)
0.3 2.1 GO:1902025 nitrate import(GO:1902025)
0.3 2.6 GO:0006450 regulation of translational fidelity(GO:0006450)
0.3 5.8 GO:0019853 L-ascorbic acid metabolic process(GO:0019852) L-ascorbic acid biosynthetic process(GO:0019853)
0.3 6.5 GO:0045492 xylan biosynthetic process(GO:0045492)
0.2 1.0 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 2.7 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.2 3.2 GO:0032544 plastid translation(GO:0032544)
0.2 0.7 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.2 3.3 GO:0006265 DNA topological change(GO:0006265)
0.2 1.9 GO:0006183 GTP biosynthetic process(GO:0006183)
0.2 2.6 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.2 2.6 GO:0080086 stamen filament development(GO:0080086)
0.2 0.7 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.2 0.9 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.2 5.0 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.2 0.4 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.2 1.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.2 2.9 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.2 2.9 GO:0008356 asymmetric cell division(GO:0008356)
0.2 2.8 GO:0042793 transcription from plastid promoter(GO:0042793)
0.2 8.6 GO:0010075 regulation of meristem growth(GO:0010075)
0.2 0.9 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.2 1.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.2 3.1 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.2 8.3 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 0.6 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.2 2.6 GO:0048575 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.2 1.4 GO:0090057 root radial pattern formation(GO:0090057)
0.2 14.6 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.2 0.8 GO:0048479 style development(GO:0048479) stigma development(GO:0048480)
0.2 3.4 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.2 1.4 GO:0006047 UDP-N-acetylglucosamine metabolic process(GO:0006047) UDP-N-acetylglucosamine biosynthetic process(GO:0006048) amino sugar biosynthetic process(GO:0046349)
0.2 3.1 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.2 7.2 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.2 2.3 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.2 3.4 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.2 0.9 GO:1904961 quiescent center organization(GO:1904961)
0.2 2.6 GO:0010274 hydrotropism(GO:0010274)
0.2 0.7 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.2 10.5 GO:0043038 amino acid activation(GO:0043038) tRNA aminoacylation(GO:0043039)
0.2 2.0 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.2 0.7 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.2 1.0 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.2 10.4 GO:0007267 cell-cell signaling(GO:0007267)
0.2 3.9 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.2 8.8 GO:0009809 lignin biosynthetic process(GO:0009809)
0.2 1.0 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.2 2.5 GO:0009299 mRNA transcription(GO:0009299)
0.2 2.2 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.2 9.1 GO:0016125 sterol metabolic process(GO:0016125)
0.2 0.6 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.2 0.8 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.2 0.8 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.2 2.3 GO:0006538 glutamate catabolic process(GO:0006538)
0.2 0.3 GO:0006266 DNA ligation(GO:0006266) DNA ligation involved in DNA repair(GO:0051103)
0.2 0.9 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.2 0.5 GO:0000012 single strand break repair(GO:0000012)
0.2 2.3 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.1 0.9 GO:0015846 polyamine transport(GO:0015846)
0.1 1.5 GO:0085029 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.1 3.7 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1 4.1 GO:0010027 thylakoid membrane organization(GO:0010027)
0.1 1.4 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 0.6 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.1 1.9 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 2.4 GO:0006303 double-strand break repair via nonhomologous end joining(GO:0006303)
0.1 1.0 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.1 1.9 GO:0009641 shade avoidance(GO:0009641)
0.1 1.2 GO:0071514 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.1 1.0 GO:2000067 regulation of root morphogenesis(GO:2000067)
0.1 3.0 GO:0006094 gluconeogenesis(GO:0006094)
0.1 1.0 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 0.7 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 1.4 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 3.2 GO:2000030 regulation of response to red or far red light(GO:2000030)
0.1 3.0 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 0.8 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 1.2 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 1.4 GO:0007006 mitochondrial membrane organization(GO:0007006)
0.1 4.8 GO:0016485 protein processing(GO:0016485)
0.1 0.9 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 1.2 GO:0070475 rRNA base methylation(GO:0070475)
0.1 1.7 GO:0030488 tRNA methylation(GO:0030488)
0.1 1.6 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 2.2 GO:0006270 DNA replication initiation(GO:0006270)
0.1 1.5 GO:0009901 anther dehiscence(GO:0009901)
0.1 0.4 GO:0071043 nuclear mRNA surveillance of mRNA 3'-end processing(GO:0071031) CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043) nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription(GO:0071049)
0.1 0.9 GO:0009750 response to fructose(GO:0009750)
0.1 3.6 GO:0034968 histone lysine methylation(GO:0034968)
0.1 0.6 GO:0060429 epithelium development(GO:0060429)
0.1 1.4 GO:0045596 negative regulation of cell differentiation(GO:0045596) maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.6 GO:0097502 mannosylation(GO:0097502)
0.1 8.2 GO:0045490 pectin catabolic process(GO:0045490)
0.1 1.7 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 1.2 GO:0051307 meiotic chromosome separation(GO:0051307)
0.1 0.6 GO:0009645 response to low light intensity stimulus(GO:0009645) response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.1 1.8 GO:0009959 negative gravitropism(GO:0009959)
0.1 2.9 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.1 3.7 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.1 0.4 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 2.3 GO:0022603 regulation of anatomical structure morphogenesis(GO:0022603)
0.1 1.3 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.1 0.8 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.1 0.5 GO:0009584 detection of visible light(GO:0009584)
0.1 1.1 GO:0006102 isocitrate metabolic process(GO:0006102)
0.1 1.5 GO:0010187 negative regulation of seed germination(GO:0010187)
0.1 2.1 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.1 1.9 GO:0042026 protein refolding(GO:0042026)
0.1 0.4 GO:0009704 de-etiolation(GO:0009704)
0.1 2.2 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.1 1.8 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.1 0.6 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.5 GO:0009819 drought recovery(GO:0009819)
0.1 1.0 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 6.3 GO:0080167 response to karrikin(GO:0080167)
0.1 1.2 GO:0006730 one-carbon metabolic process(GO:0006730)
0.1 0.2 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 1.7 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 0.6 GO:0010098 suspensor development(GO:0010098)
0.1 1.4 GO:0006306 DNA alkylation(GO:0006305) DNA methylation(GO:0006306)
0.1 1.8 GO:0048825 cotyledon development(GO:0048825)
0.1 1.0 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.1 1.6 GO:0010218 response to far red light(GO:0010218)
0.1 0.6 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 1.3 GO:0010346 secondary shoot formation(GO:0010223) shoot axis formation(GO:0010346)
0.1 0.4 GO:0019079 viral genome replication(GO:0019079)
0.1 1.1 GO:0051782 negative regulation of cell division(GO:0051782)
0.1 1.3 GO:0009698 phenylpropanoid metabolic process(GO:0009698)
0.1 2.8 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.1 2.3 GO:0048509 regulation of meristem development(GO:0048509)
0.1 0.8 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 1.3 GO:0030091 protein repair(GO:0030091)
0.0 0.6 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.1 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.1 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.0 1.4 GO:0046031 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757) purine nucleoside diphosphate metabolic process(GO:0009135) purine ribonucleoside diphosphate metabolic process(GO:0009179) ADP metabolic process(GO:0046031)
0.0 0.5 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.9 GO:0000096 sulfur amino acid metabolic process(GO:0000096)
0.0 0.5 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 2.6 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.6 GO:0032886 regulation of microtubule-based process(GO:0032886)
0.0 0.6 GO:0015865 purine nucleotide transport(GO:0015865)
0.0 0.3 GO:1901970 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 1.4 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.9 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 1.0 GO:0099515 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.0 1.2 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.3 GO:0046246 terpene biosynthetic process(GO:0046246)
0.0 0.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.9 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.8 GO:1905039 organic acid transmembrane transport(GO:1903825) carboxylic acid transmembrane transport(GO:1905039)
0.0 0.1 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.0 3.1 GO:0009658 chloroplast organization(GO:0009658)
0.0 0.9 GO:0006414 translational elongation(GO:0006414)
0.0 0.7 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 1.4 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.3 GO:0071248 cellular response to metal ion(GO:0071248)
0.0 1.8 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.4 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.2 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.3 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.0 0.6 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 0.8 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.0 0.2 GO:0015770 sucrose transport(GO:0015770)
0.0 0.0 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.0 0.3 GO:0019915 lipid storage(GO:0019915)
0.0 0.1 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.8 GO:0015979 photosynthesis(GO:0015979)
0.0 0.0 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.1 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
3.2 9.5 GO:0030093 chloroplast photosystem I(GO:0030093)
2.0 8.1 GO:0010330 cellulose synthase complex(GO:0010330)
2.0 10.0 GO:0009897 external side of plasma membrane(GO:0009897)
1.8 16.1 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
1.6 6.2 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
1.2 51.7 GO:0010319 stromule(GO:0010319)
1.0 6.0 GO:0009346 citrate lyase complex(GO:0009346)
0.9 6.2 GO:0005828 kinetochore microtubule(GO:0005828)
0.8 7.9 GO:0042555 MCM complex(GO:0042555)
0.8 5.3 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.7 3.6 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.7 7.3 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.7 4.6 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.6 3.0 GO:0005960 glycine cleavage complex(GO:0005960)
0.6 9.3 GO:0072686 mitotic spindle(GO:0072686)
0.5 1.6 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.5 2.6 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.5 5.6 GO:0005663 DNA replication factor C complex(GO:0005663)
0.5 3.0 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.5 5.4 GO:0048226 Casparian strip(GO:0048226)
0.5 1.4 GO:0035371 microtubule plus-end(GO:0035371) microtubule end(GO:1990752)
0.5 2.3 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.4 3.5 GO:0009538 photosystem I reaction center(GO:0009538)
0.4 2.1 GO:0005719 nuclear euchromatin(GO:0005719)
0.4 1.8 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.4 7.3 GO:0009508 plastid chromosome(GO:0009508)
0.4 2.5 GO:0031298 replication fork protection complex(GO:0031298)
0.3 5.0 GO:0009986 cell surface(GO:0009986)
0.3 1.0 GO:0000791 euchromatin(GO:0000791)
0.3 3.1 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.3 0.9 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.3 0.9 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.3 1.7 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.3 3.7 GO:0045298 tubulin complex(GO:0045298)
0.3 75.6 GO:0048046 apoplast(GO:0048046)
0.3 5.1 GO:0042644 chloroplast nucleoid(GO:0042644)
0.2 34.2 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.2 0.9 GO:0042788 polysomal ribosome(GO:0042788)
0.2 1.5 GO:0032153 cell division site(GO:0032153)
0.2 0.6 GO:0043235 TAT protein transport complex(GO:0033281) receptor complex(GO:0043235)
0.2 32.7 GO:0009505 plant-type cell wall(GO:0009505)
0.2 0.7 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.2 41.4 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.2 0.8 GO:0030286 dynein complex(GO:0030286)
0.2 1.1 GO:0005787 signal peptidase complex(GO:0005787)
0.1 17.4 GO:0031225 anchored component of membrane(GO:0031225)
0.1 68.4 GO:0009941 chloroplast envelope(GO:0009941)
0.1 48.5 GO:0009570 chloroplast stroma(GO:0009570)
0.1 0.5 GO:0031932 TORC2 complex(GO:0031932)
0.1 0.4 GO:0009527 plastid outer membrane(GO:0009527)
0.1 0.9 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.1 2.1 GO:0016324 apical plasma membrane(GO:0016324)
0.1 3.4 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.1 0.6 GO:0005845 mRNA cap binding complex(GO:0005845)
0.1 0.1 GO:0045177 apical part of cell(GO:0045177)
0.1 0.7 GO:0043073 germ cell nucleus(GO:0043073)
0.1 3.3 GO:0005875 microtubule associated complex(GO:0005875)
0.1 0.2 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 1.0 GO:0005880 nuclear microtubule(GO:0005880)
0.1 2.0 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 0.7 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 0.9 GO:0005876 spindle microtubule(GO:0005876)
0.1 2.1 GO:0000794 condensed nuclear chromosome(GO:0000794)
0.1 7.7 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 145.9 GO:0005576 extracellular region(GO:0005576)
0.1 0.4 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.1 1.0 GO:0016459 myosin complex(GO:0016459)
0.1 1.2 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.1 0.1 GO:0005640 nuclear outer membrane(GO:0005640)
0.0 0.4 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.2 GO:0034515 proteasome storage granule(GO:0034515)
0.0 0.5 GO:0031902 late endosome membrane(GO:0031902)
0.0 0.6 GO:0000775 chromosome, centromeric region(GO:0000775)
0.0 1.0 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.3 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.2 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.1 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.2 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.5 GO:0099503 secretory vesicle(GO:0099503)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
3.3 9.8 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
2.8 11.4 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
2.6 7.9 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
2.5 7.5 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
2.2 11.0 GO:0042084 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
2.1 10.6 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
2.1 8.3 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
2.1 10.4 GO:0004001 adenosine kinase activity(GO:0004001)
2.1 6.2 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
1.8 5.4 GO:0045430 chalcone isomerase activity(GO:0045430)
1.7 5.0 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
1.7 11.6 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
1.6 4.9 GO:0010283 pinoresinol reductase activity(GO:0010283)
1.6 3.1 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
1.6 4.7 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
1.6 6.2 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
1.5 6.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
1.5 47.8 GO:0004089 carbonate dehydratase activity(GO:0004089)
1.5 4.5 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
1.4 17.8 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
1.3 3.9 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
1.2 6.1 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
1.2 3.5 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
1.1 4.5 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
1.1 13.0 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
1.0 5.1 GO:0004614 phosphoglucomutase activity(GO:0004614)
1.0 22.2 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
1.0 6.0 GO:0003878 ATP citrate synthase activity(GO:0003878)
1.0 2.9 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
1.0 7.8 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.9 2.8 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.9 3.6 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.9 6.0 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.9 4.3 GO:0035197 siRNA binding(GO:0035197)
0.8 3.4 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.8 1.6 GO:0016841 ammonia-lyase activity(GO:0016841)
0.8 9.5 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.8 20.5 GO:0016168 chlorophyll binding(GO:0016168)
0.8 3.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.8 3.8 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.8 6.1 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.8 2.3 GO:0051010 microtubule plus-end binding(GO:0051010)
0.7 4.5 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.7 2.9 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.7 2.2 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.7 3.6 GO:0050113 inositol oxygenase activity(GO:0050113)
0.7 17.8 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.7 4.9 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.7 17.3 GO:0004565 beta-galactosidase activity(GO:0004565)
0.7 3.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.7 2.0 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.7 5.4 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.7 4.0 GO:0051723 protein methylesterase activity(GO:0051723)
0.7 2.0 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.7 4.6 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.6 1.9 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.6 3.1 GO:0004072 aspartate kinase activity(GO:0004072)
0.6 5.6 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.6 1.8 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.6 3.7 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.6 14.0 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.6 7.1 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.6 2.9 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.6 4.6 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.6 6.3 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.6 1.7 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.6 1.7 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.6 6.2 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.6 37.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.6 3.9 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.5 1.6 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.5 6.2 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.5 5.6 GO:0008199 ferric iron binding(GO:0008199)
0.5 2.0 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.5 1.5 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.5 1.4 GO:0008172 S-methyltransferase activity(GO:0008172)
0.5 1.4 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.5 1.9 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.5 2.3 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.5 1.8 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.4 2.7 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.4 3.6 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.4 1.3 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.4 1.3 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.4 2.6 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.4 4.7 GO:0016872 intramolecular lyase activity(GO:0016872)
0.4 4.2 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.4 1.7 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.4 2.1 GO:0000150 recombinase activity(GO:0000150)
0.4 3.3 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.4 2.3 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.4 3.8 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.4 1.1 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.4 2.5 GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity(GO:0004066)
0.4 1.1 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.4 3.9 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.3 1.7 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.3 2.4 GO:0050551 myrcene synthase activity(GO:0050551)
0.3 2.7 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.3 3.0 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.3 9.6 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.3 3.5 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.3 2.2 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.3 1.6 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.3 0.9 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.3 3.9 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.3 1.8 GO:0003913 DNA photolyase activity(GO:0003913)
0.3 0.6 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.3 7.9 GO:0008810 cellulase activity(GO:0008810)
0.3 6.0 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.3 2.0 GO:0004739 pyruvate dehydrogenase activity(GO:0004738) pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.3 1.7 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.3 1.4 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.3 0.8 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.3 2.5 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.3 2.7 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.3 1.3 GO:1902387 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.3 1.3 GO:0008430 selenium binding(GO:0008430)
0.3 2.5 GO:0004312 fatty acid synthase activity(GO:0004312)
0.3 1.0 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.2 3.0 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.2 6.2 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.2 4.2 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.2 9.3 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.2 1.7 GO:0008169 C-methyltransferase activity(GO:0008169)
0.2 1.0 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.2 1.7 GO:0032977 membrane insertase activity(GO:0032977)
0.2 0.9 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.2 3.1 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.2 1.2 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 2.3 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.2 1.4 GO:0004970 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.2 2.1 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.2 4.6 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.2 5.3 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.2 9.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.2 2.5 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.2 0.9 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.2 0.8 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.2 1.6 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.2 5.8 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 1.0 GO:0003680 AT DNA binding(GO:0003680)
0.2 3.1 GO:0016018 cyclosporin A binding(GO:0016018)
0.2 0.8 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 1.5 GO:0004383 guanylate cyclase activity(GO:0004383)
0.2 0.7 GO:0016882 cyclo-ligase activity(GO:0016882)
0.2 1.7 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.2 2.3 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.2 0.6 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.2 0.8 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.2 0.6 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.2 0.8 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.2 0.5 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.2 0.8 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.2 0.6 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.2 0.5 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.2 1.5 GO:0004017 adenylate kinase activity(GO:0004017)
0.1 0.6 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.1 2.2 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 16.0 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 0.6 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 1.4 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 1.5 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 5.5 GO:0016759 cellulose synthase activity(GO:0016759)
0.1 0.7 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.1 2.7 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 2.2 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.4 GO:0031210 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.1 2.4 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.1 0.9 GO:0003916 DNA topoisomerase activity(GO:0003916) DNA topoisomerase type I activity(GO:0003917)
0.1 0.9 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 0.7 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 0.4 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 4.7 GO:0008320 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.1 3.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 1.6 GO:0015301 anion:anion antiporter activity(GO:0015301)
0.1 0.7 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.4 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.1 0.3 GO:0016420 malonyltransferase activity(GO:0016420) O-malonyltransferase activity(GO:0050736)
0.1 0.6 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 1.9 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 1.9 GO:0010333 terpene synthase activity(GO:0010333)
0.1 1.0 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.7 GO:0005047 signal recognition particle binding(GO:0005047)
0.1 0.9 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.1 2.1 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.8 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.3 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.3 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 1.4 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 1.0 GO:0033613 activating transcription factor binding(GO:0033613)
0.1 23.8 GO:0003735 structural constituent of ribosome(GO:0003735)
0.1 0.4 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 1.5 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 4.0 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1 0.9 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 1.6 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 11.6 GO:0008168 methyltransferase activity(GO:0008168)
0.1 1.1 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.6 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.9 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 2.6 GO:0005179 hormone activity(GO:0005179)
0.1 2.1 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.1 2.5 GO:0043022 ribosome binding(GO:0043022)
0.1 0.2 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460) UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 0.2 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.1 0.7 GO:0070300 phosphatidic acid binding(GO:0070300)
0.1 0.7 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 1.2 GO:0008066 glutamate receptor activity(GO:0008066)
0.1 0.2 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 1.1 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 0.5 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.8 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.1 2.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 9.5 GO:0008017 microtubule binding(GO:0008017)
0.1 3.6 GO:0043621 protein self-association(GO:0043621)
0.1 0.3 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 5.9 GO:0051082 unfolded protein binding(GO:0051082)
0.1 0.3 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.1 0.9 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 2.3 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 1.6 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.1 0.6 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 1.8 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 2.7 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.4 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.0 0.4 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.5 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.5 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions(GO:0016722) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.6 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.7 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 1.7 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.7 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.3 GO:0008083 growth factor activity(GO:0008083)
0.0 0.7 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.0 2.3 GO:0038023 signaling receptor activity(GO:0038023)
0.0 0.8 GO:0022843 voltage-gated cation channel activity(GO:0022843)
0.0 2.8 GO:0004601 peroxidase activity(GO:0004601)
0.0 4.2 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 0.4 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.0 0.3 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.4 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.7 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 3.6 GO:0043531 ADP binding(GO:0043531)
0.0 0.7 GO:0010181 FMN binding(GO:0010181)
0.0 1.2 GO:0070008 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.4 GO:0004527 exonuclease activity(GO:0004527)
0.0 0.4 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.6 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 1.9 GO:0003779 actin binding(GO:0003779)
0.0 0.1 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.0 0.3 GO:0017069 snRNA binding(GO:0017069)
0.0 0.3 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.0 0.2 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.2 GO:0003730 mRNA 3'-UTR binding(GO:0003730)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
4.4 35.5 PID CMYB PATHWAY C-MYB transcription factor network
2.9 11.6 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
2.0 7.9 NABA SECRETED FACTORS Genes encoding secreted soluble factors
1.6 3.1 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.8 3.8 PID P73PATHWAY p73 transcription factor network
0.6 3.8 PID ATM PATHWAY ATM pathway
0.4 4.0 PID FANCONI PATHWAY Fanconi anemia pathway
0.4 1.7 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.2 1.4 PID TELOMERASE PATHWAY Regulation of Telomerase
0.2 1.5 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.9 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.1 0.4 PID REELIN PATHWAY Reelin signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
6.3 37.8 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
1.6 7.9 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.8 1.7 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.5 2.2 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.5 4.0 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.5 9.2 REACTOME DEVELOPMENTAL BIOLOGY Genes involved in Developmental Biology
0.4 2.9 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.3 2.1 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.3 1.6 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.3 2.3 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination
0.3 0.8 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.2 0.5 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 1.4 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.2 4.6 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.2 0.8 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.1 2.2 REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS Genes involved in Activation of ATR in response to replication stress
0.1 0.7 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME SIGNALING BY THE B CELL RECEPTOR BCR Genes involved in Signaling by the B Cell Receptor (BCR)