GSE43616: Time-course of wild-type Arabidopsis leaf
Gene Symbol | Gene ID | Gene Info |
---|---|---|
AT1G12610
|
AT1G12610 | Integrase-type DNA-binding superfamily protein |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
DDF1 | arTal_v1_Chr1_-_4291017_4291017 | -0.47 | 1.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
arTal_v1_Chr4_+_13391293_13391344 Show fit | 4.35 |
AT4G26530.2
AT4G26530.1 |
Aldolase superfamily protein |
|
arTal_v1_Chr1_-_29635931_29635931 Show fit | 4.25 |
AT1G78820.1
|
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein |
|
arTal_v1_Chr3_-_197974_197974 Show fit | 4.22 |
AT3G01500.1
|
carbonic anhydrase 1 |
|
arTal_v1_Chr3_-_198160_198160 Show fit | 4.16 |
AT3G01500.2
|
carbonic anhydrase 1 |
|
arTal_v1_Chr3_-_198664_198664 Show fit | 4.12 |
AT3G01500.3
|
carbonic anhydrase 1 |
|
arTal_v1_Chr5_+_4757856_4757972 Show fit | 4.04 |
AT5G14740.3
AT5G14740.6 AT5G14740.1 AT5G14740.7 AT5G14740.8 AT5G14740.2 AT5G14740.4 AT5G14740.5 |
carbonic anhydrase 2 |
|
arTal_v1_Chr4_+_13390754_13390754 Show fit | 4.03 |
AT4G26530.3
|
Aldolase superfamily protein |
|
arTal_v1_Chr3_-_197564_197564 Show fit | 4.01 |
AT3G01500.4
|
carbonic anhydrase 1 |
|
arTal_v1_Chr5_+_4758921_4758921 Show fit | 3.46 |
AT5G14740.9
|
carbonic anhydrase 2 |
|
arTal_v1_Chr3_+_5556710_5556710 Show fit | 3.45 |
AT3G16370.1
|
GDSL-like Lipase/Acylhydrolase superfamily protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 24.0 | GO:0015976 | carbon utilization(GO:0015976) |
0.8 | 13.7 | GO:0030388 | fructose 1,6-bisphosphate metabolic process(GO:0030388) |
0.3 | 8.6 | GO:0010025 | wax biosynthetic process(GO:0010025) |
0.1 | 7.4 | GO:0045490 | pectin catabolic process(GO:0045490) |
0.1 | 6.5 | GO:0006869 | lipid transport(GO:0006869) |
0.6 | 6.4 | GO:0046083 | adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084) |
0.1 | 6.2 | GO:0009834 | plant-type secondary cell wall biogenesis(GO:0009834) |
0.5 | 5.4 | GO:0010206 | photosystem II repair(GO:0010206) |
0.7 | 4.5 | GO:0043447 | alkane biosynthetic process(GO:0043447) |
0.2 | 4.4 | GO:0043572 | chloroplast fission(GO:0010020) plastid fission(GO:0043572) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 29.4 | GO:0048046 | apoplast(GO:0048046) |
0.1 | 29.4 | GO:0009941 | chloroplast envelope(GO:0009941) |
0.1 | 20.9 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
0.5 | 20.4 | GO:0010319 | stromule(GO:0010319) |
0.0 | 6.9 | GO:0009505 | plant-type cell wall(GO:0009505) |
0.0 | 4.6 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.1 | 4.5 | GO:0031977 | thylakoid lumen(GO:0031977) |
0.7 | 3.6 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 3.1 | GO:0009654 | photosystem II oxygen evolving complex(GO:0009654) |
0.0 | 2.5 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 23.8 | GO:0004089 | carbonate dehydratase activity(GO:0004089) |
1.0 | 13.7 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
0.1 | 13.2 | GO:0008017 | microtubule binding(GO:0008017) |
0.0 | 8.6 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.7 | 5.6 | GO:0003999 | adenine phosphoribosyltransferase activity(GO:0003999) |
0.2 | 5.3 | GO:0016762 | xyloglucan:xyloglucosyl transferase activity(GO:0016762) |
0.0 | 4.5 | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity(GO:0008757) |
0.0 | 4.5 | GO:0042803 | protein homodimerization activity(GO:0042803) |
0.2 | 4.0 | GO:0102337 | 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338) |
0.1 | 3.9 | GO:0046910 | pectinesterase inhibitor activity(GO:0046910) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.1 | 16.5 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.8 | 3.2 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.2 | 0.7 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.0 | 24.0 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
1.2 | 3.7 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |
0.1 | 1.1 | REACTOME DEVELOPMENTAL BIOLOGY | Genes involved in Developmental Biology |
0.2 | 0.7 | REACTOME G2 M DNA DAMAGE CHECKPOINT | Genes involved in G2/M DNA damage checkpoint |
0.0 | 0.4 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.1 | 0.3 | REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT | Genes involved in Lipid digestion, mobilization, and transport |
0.0 | 0.1 | REACTOME PI METABOLISM | Genes involved in PI Metabolism |