ISMARA results: AT5G63790

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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G63790

Z-value: 0.23

Transcription factors associated with AT5G63790

Gene Symbol	Gene ID	Gene Info
AT5G63790 TAIR	AT5G63790	NAC domain containing protein 102

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
NAC102	arTal_v1_Chr5_-_25528013_25528013	0.60	2.3e-02	Click!

Activity profile of AT5G63790 motif

Sorted Z-values of AT5G63790 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr4_+_16310768_16310815 Show fit	0.32	AT4G34050.1 AT4G34050.2	CCoAOMT1 TAIR Show fit	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_+_16310409_16310409 Show fit	0.31	AT4G34050.3	CCoAOMT1 TAIR Show fit	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_-_19161552_19161552 Show fit	0.27	AT1G51680.3 AT1G51680.2	4CL1 TAIR Show fit	4-coumarate:CoA ligase 1
arTal_v1_Chr1_-_28302728_28302728 Show fit	0.25	AT1G75410.3 AT1G75410.1	BLH3 TAIR Show fit	BEL1-like homeodomain 3
arTal_v1_Chr1_-_19161737_19161737 Show fit	0.25	AT1G51680.1	4CL1 TAIR Show fit	4-coumarate:CoA ligase 1
arTal_v1_Chr1_-_28302571_28302571 Show fit	0.21	AT1G75410.2	BLH3 TAIR Show fit	BEL1-like homeodomain 3
arTal_v1_Chr2_-_15589369_15589369 Show fit	0.21	AT2G37090.1	IRX9 TAIR Show fit	Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr2_-_17060652_17060652 Show fit	0.15	AT2G40890.1	CYP98A3 TAIR Show fit	cytochrome P450, family 98, subfamily A, polypeptide 3
arTal_v1_Chr3_+_6744377_6744377 Show fit	0.15	AT3G19450.1	ATCAD4 TAIR Show fit	GroES-like zinc-binding alcohol dehydrogenase family protein
arTal_v1_Chr4_-_16063070_16063251 Show fit	0.15	AT4G33330.2 AT4G33330.1 AT4G33330.5 AT4G33330.3 AT4G33330.4	PGSIP3 TAIR Show fit	plant glycogenin-like starch initiation protein 3

Showing 1 to 10 of 13 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G63790

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.3	0.8	GO:0009805	coumarin biosynthetic process(GO:0009805)
0.0	0.5	GO:0048510	regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0	0.4	GO:0010413	glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)

Showing 1 to 3 of 3 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.6	GO:0042409	caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.0	0.5	GO:0016207	4-coumarate-CoA ligase activity(GO:0016207)
0.1	0.2	GO:0080116	glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1	0.2	GO:0046409	p-coumarate 3-hydroxylase activity(GO:0046409)
0.1	0.2	GO:0047517	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.0	0.2	GO:0052747	sinapyl alcohol dehydrogenase activity(GO:0052747)

Showing 1 to 6 of 6 entries