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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G63790

Z-value: 0.23

Transcription factors associated with AT5G63790

Gene Symbol Gene ID Gene Info
AT5G63790 NAC domain containing protein 102

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC102arTal_v1_Chr5_-_25528013_255280130.602.3e-02Click!

Activity profile of AT5G63790 motif

Sorted Z-values of AT5G63790 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_16310768 0.32 AT4G34050.1
AT4G34050.2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_16310409 0.31 AT4G34050.3
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_19161552 0.27 AT1G51680.3
AT1G51680.2
4-coumarate:CoA ligase 1
Chr1_-_28302728 0.25 AT1G75410.3
AT1G75410.1
BEL1-like homeodomain 3
Chr1_-_19161737 0.25 AT1G51680.1
4-coumarate:CoA ligase 1
Chr1_-_28302571 0.21 AT1G75410.2
BEL1-like homeodomain 3
Chr2_-_15589369 0.21 AT2G37090.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr2_-_17060652 0.15 AT2G40890.1
cytochrome P450, family 98, subfamily A, polypeptide 3
Chr3_+_6744377 0.15 AT3G19450.1
GroES-like zinc-binding alcohol dehydrogenase family protein
Chr4_-_16063070 0.15 AT4G33330.2
AT4G33330.1
AT4G33330.5
AT4G33330.3
AT4G33330.4
plant glycogenin-like starch initiation protein 3
Chr4_+_13723610 0.08 AT4G27435.1
fiber (DUF1218)
Chr1_+_22836327 0.04 AT1G61820.3
beta glucosidase 46
Chr5_-_24422274 0.01 AT5G60720.1
electron transporter, putative (Protein of unknown function, DUF547)

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G63790

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.0 0.4 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.5 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 0.2 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.2 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 0.2 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.0 0.5 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.2 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)