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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G62020

Z-value: 1.06

Transcription factors associated with AT5G62020

Gene Symbol Gene ID Gene Info
AT5G62020
AT5G62020 heat shock transcription factor B2A

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HSFB2AarTal_v1_Chr5_+_24915807_249158070.441.1e-01Click!

Activity profile of AT5G62020 motif

Sorted Z-values of AT5G62020 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_19265141 1.66 AT3G51910.1
HSFA7A
heat shock transcription factor A7A
Chr2_-_16603059 1.58 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr2_+_11135624 1.50 AT2G26150.2
AT2G26150.1
AT2G26150.4
AT2G26150.3
HSFA2
heat shock transcription factor A2
Chr2_-_8850111 1.48 AT2G20560.1
AT2G20560
DNAJ heat shock family protein
Chr2_-_16603319 1.38 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr5_-_20204595 1.34 AT5G49730.1
AT5G49730.2
FRO6
ferric reduction oxidase 6
Chr1_+_19685747 1.26 AT1G52870.1
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr1_+_19685545 1.25 AT1G52870.2
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr2_-_10702203 1.24 AT2G25140.1
CLPB4
casein lytic proteinase B4
Chr1_+_2274926 1.23 AT1G07400.1
AT1G07400
HSP20-like chaperones superfamily protein
Chr1_-_4855287 1.20 AT1G14200.1
AT1G14200
RING/U-box superfamily protein
Chr4_+_1292483 1.12 AT4G02920.1
AT4G02920.2
AT4G02920
hypothetical protein
Chr1_-_20180354 1.05 AT1G54050.2
AT1G54050
HSP20-like chaperones superfamily protein
Chr4_+_7042354 1.02 AT4G11660.1
AT-HSFB2B
winged-helix DNA-binding transcription factor family protein
Chr2_+_18986133 1.02 AT2G46240.1
BAG6
BCL-2-associated athanogene 6
Chr4_-_407142 1.01 AT4G00950.1
MEE47
hypothetical protein (DUF688)
Chr5_+_5237970 1.01 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
Chr1_-_20180566 1.00 AT1G54050.1
AT1G54050
HSP20-like chaperones superfamily protein
Chr1_-_26770175 0.99 AT1G71000.1
AT1G71000.2
AT1G71000
Chaperone DnaJ-domain superfamily protein
Chr1_-_24595544 0.96 AT1G66060.1
AT1G66060
hypothetical protein (DUF577)
Chr3_-_5173001 0.89 AT3G15354.4
AT3G15354.1
AT3G15354.2
AT3G15354.3
SPA3
SPA1-related 3
Chr4_-_10325816 0.86 AT4G18810.2
AT4G18810.1
AT4G18810
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_-_22244061 0.86 AT3G60180.2
AT3G60180.1
AT3G60180
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_14968758 0.84 AT5G37670.1
AT5G37670
HSP20-like chaperones superfamily protein
Chr3_-_17475274 0.84 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
Chr1_-_29459493 0.83 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
Chr5_-_21291928 0.81 AT5G52450.1
AT5G52450
MATE efflux family protein
Chr5_+_8672316 0.80 AT5G25140.1
CYP71B13
cytochrome P450, family 71, subfamily B, polypeptide 13
Chr1_+_22031343 0.80 AT1G59860.1
AT1G59860
HSP20-like chaperones superfamily protein
Chr4_-_7341361 0.78 AT4G12400.2
AT4G12400.1
Hop3
stress-inducible protein
Chr3_+_2870970 0.76 AT3G09350.1
AT3G09350.3
AT3G09350.2
AT3G09350.4
Fes1A
Fes1A
Chr5_-_642026 0.76 AT5G02810.1
AT5G02810.2
PRR7
pseudo-response regulator 7
Chr1_-_9286395 0.75 AT1G26800.1
AT1G26800
RING/U-box superfamily protein
Chr5_+_5238502 0.74 AT5G16030.5
AT5G16030
mental retardation GTPase activating protein
Chr1_-_756303 0.74 AT1G03140.1
AT1G03140
splicing factor Prp18 family protein
Chr5_+_5649057 0.74 AT5G17170.1
AT5G17170.2
ENH1
rubredoxin family protein
Chr2_-_9056481 0.74 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr5_+_8668232 0.73 AT5G25130.1
CYP71B12
cytochrome P450, family 71, subfamily B, polypeptide 12
Chr3_-_9632009 0.73 AT3G26280.1
AT3G26280.2
CYP71B4
cytochrome P450, family 71, subfamily B, polypeptide 4
Chr5_-_25071111 0.72 AT5G62430.1
CDF1
cycling DOF factor 1
Chr3_+_5081780 0.72 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
Chr3_+_3239180 0.71 AT3G10420.1
SPD1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_3238996 0.70 AT3G10420.2
SPD1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_17197247 0.67 AT4G36390.1
AT4G36390
Methylthiotransferase
Chr1_+_4461738 0.66 AT1G13090.1
AT1G13090.2
CYP71B28
cytochrome P450, family 71, subfamily B, polypeptide 28
Chr1_+_2152798 0.65 AT1G07010.1
AT1G07010.2
AT1G07010.3
SLP1
Calcineurin-like metallo-phosphoesterase superfamily protein
Chr2_-_16833294 0.65 AT2G40300.1
FER4
ferritin 4
Chr5_+_6797361 0.65 AT5G20130.2
AT5G20130.1
AT5G20130
sulfate adenylyltransferase subunit
Chr5_+_21352557 0.64 AT5G52640.1
HSP90.1
heat shock-like protein
Chr1_-_4921535 0.64 AT1G14380.3
AT1G14380.4
AT1G14380.2
AT1G14380.5
AT1G14380.6
AT1G14380.7
AT1G14380.1
IQD28
IQ-domain 28
Chr4_+_14073008 0.64 AT4G28480.1
AT4G28480.2
AT4G28480
DNAJ heat shock family protein
Chr5_-_6869266 0.64 AT5G20320.1
AT5G20320.2
DCL4
dicer-like 4
Chr4_-_12068538 0.64 AT4G23020.2
AT4G23020.1
TRM11
hypothetical protein
Chr1_+_29526861 0.63 AT1G78490.2
AT1G78490.1
CYP708A3
cytochrome P450, family 708, subfamily A, polypeptide 3
Chr4_+_8875656 0.62 AT4G15545.1
AT4G15545
PH-response transcription factor
Chr5_-_23249504 0.61 AT5G57380.1
VIN3
Fibronectin type III domain-containing protein
Chr1_-_5504535 0.61 AT1G16030.1
Hsp70b
heat shock protein 70B
Chr2_-_14479962 0.61 AT2G34310.6
AT2G34310.1
AT2G34310.2
AT2G34310.5
AT2G34310.3
AT2G34310.4
AT2G34310.7
AT2G34310
hypothetical protein
Chr3_-_22169984 0.60 AT3G60030.1
SPL12
squamosa promoter-binding protein-like 12
Chr5_-_23248865 0.60 AT5G57380.2
VIN3
Fibronectin type III domain-containing protein
Chr5_-_21123133 0.60 AT5G52010.1
AT5G52010
C2H2-like zinc finger protein
Chr4_+_13743011 0.60 AT4G27500.1
AT4G27500.2
PPI1
proton pump interactor 1
Chr3_-_5171674 0.59 AT3G15354.5
SPA3
SPA1-related 3
Chr4_+_1358267 0.59 AT4G03070.1
AOP1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_+_535198 0.58 AT4G01280.1
AT4G01280.2
AT4G01280
Homeodomain-like superfamily protein
Chr1_-_21178974 0.58 AT1G56520.2
AT1G56520.5
AT1G56520.1
AT1G56520.3
AT1G56520.4
AT1G56520
Disease resistance protein (TIR-NBS-LRR class) family
Chr5_+_22686832 0.58 AT5G56030.2
HSP81-2
heat shock protein 81-2
Chr4_-_10472726 0.58 AT4G19150.2
AT4G19150.1
AT4G19150
Ankyrin repeat family protein
Chr1_-_22382422 0.58 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
Chr1_+_19996205 0.57 AT1G53590.1
NTMC2T6.1
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_+_22686473 0.57 AT5G56030.1
HSP81-2
heat shock protein 81-2
Chr1_-_26076374 0.57 AT1G69360.1
AT1G69360
T-box transcription factor, putative (DUF863)
Chr2_-_12165929 0.56 AT2G28450.1
AT2G28450.2
AT2G28450
zinc finger (CCCH-type) family protein
Chr1_+_13192608 0.56 AT1G35660.1
AT1G35660
erythroid differentiation factor-like protein
Chr3_-_5087496 0.56 AT3G15115.1
AT3G15115
serine/arginine repetitive matrix protein
Chr5_+_21317130 0.55 AT5G52530.3
AT5G52530.2
AT5G52530.1
AT5G52530
dentin sialophosphoprotein-like protein
Chr2_+_11488988 0.55 AT2G26920.1
AT2G26920
Ubiquitin-associated/translation elongation factor EF1B protein
Chr1_-_23801720 0.55 AT1G64110.1
AT1G64110.3
AT1G64110.2
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_1807530 0.55 AT3G06010.1
ATCHR12
SNF2/Brahma-type chromatin-remodeling protein CHR12
Chr1_-_11079240 0.54 AT1G31050.8
AT1G31050.7
AT1G31050.4
AT1G31050.6
AT1G31050.5
AT1G31050.3
AT1G31050.2
AT1G31050.1
AT1G31050
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_18326175 0.54 AT5G45250.1
RPS4
Disease resistance protein (TIR-NBS-LRR class) family
Chr5_-_26561254 0.54 AT5G66550.1
AT5G66550.4
AT5G66550.3
AT5G66550
Maf-like protein
Chr1_+_4194420 0.54 AT1G12330.1
AT1G12330
cyclin-dependent kinase-like protein
Chr2_+_505375 0.53 AT2G02070.1
AT2G02070.2
IDD5
indeterminate(ID)-domain 5
Chr1_+_10918267 0.53 AT1G30760.2
AT1G30760.1
AT1G30760
FAD-binding Berberine family protein
Chr1_-_18626441 0.53 AT1G50280.1
AT1G50280.2
AT1G50280
Phototropic-responsive NPH3 family protein
Chr3_-_6676520 0.52 AT3G19270.1
AT3G19270.2
CYP707A4
cytochrome P450, family 707, subfamily A, polypeptide 4
Chr1_-_7413295 0.52 AT1G21160.1
AT1G21160
eukaryotic translation initiation factor 2 (eIF-2) family protein
Chr5_+_17148808 0.52 AT5G42760.2
AT5G42760.1
AT5G42760
Leucine carboxyl methyltransferase
Chr5_-_5662466 0.51 AT5G17230.2
AT5G17230.4
PSY
PHYTOENE SYNTHASE
Chr5_-_5662865 0.51 AT5G17230.3
AT5G17230.1
PSY
PHYTOENE SYNTHASE
Chr1_+_9483157 0.51 AT1G27300.1
AT1G27300
transmembrane protein
Chr5_-_3738217 0.51 AT5G11610.2
AT5G11610.1
AT5G11610.3
AT5G11610
Exostosin family protein
Chr2_+_6533687 0.51 AT2G15080.2
RLP19
receptor like protein 19
Chr1_-_11217546 0.50 AT1G31335.1
AT1G31335
transmembrane protein
Chr3_-_6901334 0.50 AT3G19850.1
AT3G19850
Phototropic-responsive NPH3 family protein
Chr1_+_24234280 0.50 AT1G65250.1
AT1G65250
Protein kinase superfamily protein
Chr3_+_18200587 0.49 AT3G49110.1
PRXCA
peroxidase CA
Chr1_-_24217436 0.49 AT1G65190.1
AT1G65190
Protein kinase superfamily protein
Chr1_+_11611891 0.49 AT1G32230.2
AT1G32230.4
AT1G32230.5
AT1G32230.6
AT1G32230.1
AT1G32230.3
RCD1
WWE protein-protein interaction domain protein family
Chr5_+_19031301 0.49 AT5G46880.1
AT5G46880.3
HB-7
homeobox-7
Chr2_+_8695374 0.49 AT2G20142.1
AT2G20142
Toll-Interleukin-Resistance (TIR) domain family protein
Chr3_+_19587756 0.48 AT3G52850.1
VSR1
vacuolar sorting receptor homolog 1
Chr4_+_8883825 0.48 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
Chr4_-_10984521 0.48 AT4G20330.1
AT4G20330
Transcription initiation factor TFIIE, beta subunit
Chr5_-_6867966 0.48 AT5G20320.3
DCL4
dicer-like 4
Chr5_-_18910838 0.48 AT5G46600.1
AT5G46600
aluminum activated malate transporter family protein
Chr1_-_7781179 0.47 AT1G22060.2
AT1G22060
sporulation-specific protein
Chr5_+_6896463 0.47 AT5G20410.1
MGD2
monogalactosyldiacylglycerol synthase 2
Chr5_-_22055443 0.47 AT5G54300.1
AT5G54300
cotton fiber-like protein (DUF761)
Chr1_-_7781539 0.47 AT1G22060.1
AT1G22060
sporulation-specific protein
Chr5_+_8661970 0.47 AT5G25120.1
CYP71B11
cytochrome p450, family 71, subfamily B, polypeptide 11
Chr5_+_26588573 0.46 AT5G66620.3
AT5G66620.1
AT5G66620.4
DAR6
DA1-related protein 6
Chr4_-_13997307 0.46 AT4G28230.1
AT4G28230
hypothetical protein
Chr2_+_19269558 0.46 AT2G46900.1
AT2G46900
transcription factor-like protein
Chr4_-_5797375 0.46 AT4G09040.2
AT4G09040.1
AT4G09040
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr3_-_9712826 0.46 AT3G26510.5
AT3G26510.4
AT3G26510.1
AT3G26510.6
AT3G26510
Octicosapeptide/Phox/Bem1p family protein
Chr2_-_5693016 0.45 AT2G13660.1
AT2G13660
hypothetical protein
Chr2_+_6533261 0.45 AT2G15080.1
RLP19
receptor like protein 19
Chr3_-_9712659 0.45 AT3G26510.3
AT3G26510.7
AT3G26510.2
AT3G26510
Octicosapeptide/Phox/Bem1p family protein
Chr3_+_5466246 0.45 AT3G16130.1
ROPGEF13
RHO guanyl-nucleotide exchange factor 13
Chr5_+_6457026 0.44 AT5G19190.1
AT5G19190
hypothetical protein
Chr2_+_11625157 0.44 AT2G27200.1
AT2G27200
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_20303334 0.44 AT5G49910.1
cpHsc70-2
chloroplast heat shock protein 70-2
Chr2_+_18691664 0.44 AT2G45340.1
AT2G45340
Leucine-rich repeat protein kinase family protein
Chr2_+_1515828 0.43 AT2G04350.2
LACS8
AMP-dependent synthetase and ligase family protein
Chr5_+_8773734 0.43 AT5G25280.1
AT5G25280.3
AT5G25280.2
AT5G25280
serine-rich protein-like protein
Chr2_+_1515634 0.43 AT2G04350.1
LACS8
AMP-dependent synthetase and ligase family protein
Chr4_-_11294014 0.42 AT4G21190.1
emb1417
Pentatricopeptide repeat (PPR) superfamily protein
Chr3_-_19592768 0.42 AT3G52860.1
AT3G52860
mediator of RNA polymerase II transcription subunit-like protein
Chr3_-_5252697 0.42 AT3G15520.1
AT3G15520.2
AT3G15520.3
AT3G15520
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr1_+_9329493 0.42 AT1G26920.1
AT1G26920
zinc finger CCHC domain protein
Chr1_+_807361 0.42 AT1G03290.2
AT1G03290.3
AT1G03290.4
AT1G03290.5
AT1G03290.6
AT1G03290.1
AT1G03290
ELKS/Rab6-interacting/CAST family protein
Chr5_-_26561468 0.42 AT5G66550.2
AT5G66550
Maf-like protein
Chr4_-_13777437 0.41 AT4G27595.2
AT4G27595.1
AT4G27595
WEB family protein (DUF827)
Chr1_-_17171461 0.41 AT1G45230.2
AT1G45230.1
AT1G45230
DCL protein (DUF3223)
Chr5_+_26926551 0.41 AT5G67470.1
FH6
formin homolog 6
Chr1_-_23801283 0.41 AT1G64110.5
AT1G64110.4
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_1470624 0.41 AT3G05180.1
AT3G05180
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_15841643 0.40 AT4G32820.2
AT4G32820.3
AT4G32820.1
AT4G32820
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_1494248 0.39 AT1G05170.2
AT1G05170.1
AT1G05170
Galactosyltransferase family protein
Chr4_+_16394600 0.39 AT4G34250.1
KCS16
3-ketoacyl-CoA synthase 16
Chr3_+_8338871 0.39 AT3G23310.1
AT3G23310
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr2_+_773645 0.39 AT2G02760.2
AT2G02760.1
AT2G02760.4
AT2G02760.3
UBC2
ubiquiting-conjugating enzyme 2
Chr1_+_28639791 0.38 AT1G76350.3
AT1G76350.2
AT1G76350
Plant regulator RWP-RK family protein
Chr5_+_24615253 0.38 AT5G61190.2
AT5G61190.5
AT5G61190.3
AT5G61190.6
AT5G61190.4
AT5G61190.7
AT5G61190.10
AT5G61190.9
AT5G61190.8
AT5G61190.11
AT5G61190.1
AT5G61190
putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein
Chr1_-_25243837 0.38 AT1G67370.1
ASY1
DNA-binding HORMA family protein
Chr1_-_27466348 0.38 AT1G73010.1
PS2
inorganic pyrophosphatase 1
Chr2_-_12634120 0.38 AT2G29500.1
AT2G29500
HSP20-like chaperones superfamily protein
Chr1_+_3702608 0.38 AT1G11090.1
AT1G11090
alpha/beta-Hydrolases superfamily protein
Chr3_-_840628 0.37 AT3G03520.2
AT3G03520.1
NPC3
non-specific phospholipase C3
Chr4_-_8633118 0.37 AT4G15110.1
CYP97B3
cytochrome P450, family 97, subfamily B, polypeptide 3
Chr2_+_15264211 0.37 AT2G36390.1
SBE2.1
starch branching enzyme 2.1
Chr2_-_14314714 0.36 AT2G33835.1
FES1
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_-_1341534 0.36 AT5G04670.1
AT5G04670
Enhancer of polycomb-like transcription factor protein
Chr1_+_16616988 0.36 AT1G43850.1
AT1G43850.2
SEU
SEUSS transcriptional co-regulator
Chr1_+_29103608 0.36 AT1G77460.3
AT1G77460.2
AT1G77460.1
AT1G77460.4
AT1G77460
CELLULOSE SYNTHASE INTERACTIVE 3
Chr3_+_2737453 0.36 AT3G08970.2
ATERDJ3A
DNAJ heat shock N-terminal domain-containing protein
Chr4_-_9525691 0.36 AT4G16920.2
AT4G16920.3
AT4G16920.6
AT4G16920.5
AT4G16920.8
AT4G16920.9
AT4G16920.1
AT4G16920.4
AT4G16920.7
AT4G16920
Disease resistance protein (TIR-NBS-LRR class) family
Chr2_+_7198127 0.35 AT2G16595.1
AT2G16595
Translocon-associated protein (TRAP), alpha subunit
Chr5_-_21421715 0.35 AT5G52860.1
ABCG8
ABC-2 type transporter family protein
Chr5_+_19030844 0.35 AT5G46880.2
HB-7
homeobox-7
Chr5_-_23236572 0.35 AT5G57350.2
AT5G57350.4
AT5G57350.1
HA3
H[+]-ATPase 3
Chr2_-_150585 0.35 AT2G01290.1
RPI2
ribose-5-phosphate isomerase 2
Chr1_+_19031909 0.35 AT1G51340.5
AT1G51340.1
AT1G51340
MATE efflux family protein
Chr5_+_981859 0.35 AT5G03740.1
HD2C
histone deacetylase 2C
Chr5_-_1341105 0.35 AT5G04670.2
AT5G04670
Enhancer of polycomb-like transcription factor protein
Chr4_-_15394626 0.34 AT4G31820.1
AT4G31820.2
ENP
Phototropic-responsive NPH3 family protein
Chr1_-_2925756 0.34 AT1G09060.4
AT1G09060.2
AT1G09060.1
AT1G09060
JmjC domain protein JMJ24
Chr3_+_2737297 0.34 AT3G08970.1
ATERDJ3A
DNAJ heat shock N-terminal domain-containing protein
Chr5_-_22773021 0.34 AT5G56250.1
AT5G56250.2
HAP8
hapless 8
Chr2_+_2457573 0.34 AT2G06255.1
ELF4-L3
ELF4-like 3
Chr3_+_21011008 0.34 AT3G56720.6
AT3G56720.3
AT3G56720.7
AT3G56720.5
AT3G56720.2
AT3G56720
pre-mRNA-splicing factor
Chr4_+_12079859 0.34 AT4G23050.1
AT4G23050
PAS domain-containing protein tyrosine kinase family protein
Chr3_+_3839101 0.34 AT3G12050.1
AT3G12050.2
AT3G12050
Aha1 domain-containing protein
Chr1_-_6802652 0.34 AT1G19660.2
AT1G19660.3
AT1G19660.1
AT1G19660
Wound-responsive family protein
Chr3_+_19723350 0.34 AT3G53230.1
AtCDC48B
ATPase, AAA-type, CDC48 protein
Chr4_+_12080060 0.33 AT4G23050.2
AT4G23050
PAS domain-containing protein tyrosine kinase family protein
Chr4_+_9876172 0.33 AT4G17770.2
AT4G17770.1
TPS5
trehalose phosphatase/synthase 5
Chr1_-_11801407 0.33 AT1G32640.1
MYC2
Basic helix-loop-helix (bHLH) DNA-binding family protein
Chr1_+_19031674 0.33 AT1G51340.3
AT1G51340.4
AT1G51340
MATE efflux family protein
Chr4_+_6288821 0.33 AT4G10060.1
AT4G10060.2
AT4G10060
Beta-glucosidase, GBA2 type family protein
Chr4_-_8870801 0.33 AT4G15530.7
AT4G15530.6
AT4G15530.5
AT4G15530.3
AT4G15530.4
AT4G15530.1
PPDK
pyruvate orthophosphate dikinase
Chr3_-_2905931 0.32 AT3G09440.4
AT3G09440.2
AT3G09440.1
AT3G09440
Heat shock protein 70 (Hsp 70) family protein
Chr4_+_6863979 0.32 AT4G11280.1
ACS6
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
Chr5_+_23080647 0.32 AT5G57035.1
AT5G57035
U-box domain-containing protein kinase family protein
Chr2_-_11679919 0.32 AT2G27290.1
AT2G27290
FAM210B-like protein, putative (DUF1279)
Chr1_-_6809642 0.32 AT1G19690.1
AT1G19690
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_10842863 0.32 AT2G25480.2
AT2G25480.1
AT2G25480
TPX2 (targeting protein for Xklp2) protein family
Chr3_-_2244820 0.32 AT3G07090.2
AT3G07090.1
AT3G07090
PPPDE putative thiol peptidase family protein
Chr5_-_23234887 0.32 AT5G57350.3
HA3
H[+]-ATPase 3
Chr3_-_2905729 0.32 AT3G09440.3
AT3G09440
Heat shock protein 70 (Hsp 70) family protein
Chr5_+_7138762 0.31 AT5G21020.2
AT5G21020
transmembrane protein
Chr5_-_7997505 0.31 AT5G23710.1
AT5G23710
DNA binding / DNA-directed RNA polymerase
Chr2_-_18971409 0.31 AT2G46180.1
GC4
golgin Putative 4
Chr3_+_17987378 0.31 AT3G48530.1
KING1
SNF1-related protein kinase regulatory subunit gamma 1
Chr4_+_13184114 0.31 AT4G25970.1
PSD3
phosphatidylserine decarboxylase 3
Chr3_-_5743212 0.31 AT3G16840.2
AT3G16840.1
AT3G16840
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_19014110 0.31 AT5G46860.1
VAM3
Syntaxin/t-SNARE family protein
Chr3_-_1518599 0.31 AT3G05327.1
AT3G05327
Cyclin family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G62020

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.0 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.3 0.9 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.2 0.7 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.2 1.1 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.2 1.2 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.2 1.9 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 1.0 GO:0010155 regulation of proton transport(GO:0010155)
0.1 0.7 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.1 0.4 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.1 0.4 GO:0046898 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.1 1.0 GO:0010508 positive regulation of autophagy(GO:0010508)
0.1 0.5 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.3 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.1 0.3 GO:0034247 snoRNA splicing(GO:0034247)
0.1 2.9 GO:0042026 protein refolding(GO:0042026)
0.1 0.5 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.4 GO:0072718 response to cisplatin(GO:0072718)
0.1 0.3 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.1 0.8 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 0.7 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1 0.5 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.1 0.4 GO:0009650 UV protection(GO:0009650)
0.1 1.5 GO:0034620 cellular response to unfolded protein(GO:0034620)
0.1 0.5 GO:0010231 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.1 0.3 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 0.2 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.2 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.1 0.8 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.3 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.8 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.1 0.2 GO:1900109 histone H3-K9 dimethylation(GO:0036123) regulation of histone H3-K9 dimethylation(GO:1900109)
0.0 0.2 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.0 0.3 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0 0.3 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.0 0.9 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.5 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.0 0.4 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 0.3 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.0 1.3 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 0.2 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.0 0.1 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.0 1.4 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 2.4 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.3 GO:0010601 positive regulation of auxin biosynthetic process(GO:0010601)
0.0 0.5 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.1 GO:0000256 allantoin catabolic process(GO:0000256)
0.0 0.2 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.6 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.4 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.7 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.3 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.4 GO:1990069 stomatal opening(GO:1990069)
0.0 0.4 GO:0030497 fatty acid elongation(GO:0030497)
0.0 0.3 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.4 GO:0051262 protein tetramerization(GO:0051262)
0.0 0.4 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.0 0.4 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.4 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.3 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.6 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.0 0.1 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.0 0.1 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0048317 seed morphogenesis(GO:0048317)
0.0 0.3 GO:0010540 basipetal auxin transport(GO:0010540)
0.0 0.1 GO:0046578 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012) regulation of Ras protein signal transduction(GO:0046578) regulation of small GTPase mediated signal transduction(GO:0051056)
0.0 0.2 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.0 0.7 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.1 GO:0090065 regulation of production of small RNA involved in gene silencing by RNA(GO:0070920) regulation of production of siRNA involved in RNA interference(GO:0090065)
0.0 0.5 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.1 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.0 0.2 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.2 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.5 GO:0016129 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.0 0.1 GO:2000757 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.1 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 1.2 GO:0010431 seed maturation(GO:0010431)
0.0 0.1 GO:0006469 negative regulation of protein kinase activity(GO:0006469) negative regulation of kinase activity(GO:0033673)
0.0 0.0 GO:1901654 response to ketone(GO:1901654)
0.0 0.1 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.2 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.4 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.1 GO:0009560 embryo sac egg cell differentiation(GO:0009560)
0.0 0.0 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.0 0.1 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.0 0.3 GO:0009612 response to mechanical stimulus(GO:0009612)
0.0 0.2 GO:0007009 plasma membrane organization(GO:0007009)
0.0 0.2 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.3 GO:0007030 Golgi organization(GO:0007030)
0.0 0.8 GO:0009624 response to nematode(GO:0009624)
0.0 0.3 GO:0055072 iron ion homeostasis(GO:0055072)
0.0 0.4 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.2 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.6 GO:0016363 nuclear matrix(GO:0016363)
0.1 0.5 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.1 0.3 GO:0000923 equatorial microtubule organizing center(GO:0000923) gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274) cell division site part(GO:0032155)
0.1 1.4 GO:0031970 organelle envelope lumen(GO:0031970)
0.1 0.5 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.1 0.2 GO:0032153 cell division site(GO:0032153)
0.1 0.3 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.1 0.7 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.0 5.0 GO:0018995 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.1 GO:0030874 nucleolar chromatin(GO:0030874)
0.0 0.1 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.3 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.2 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.0 0.1 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.7 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.4 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 0.5 GO:0005764 lysosome(GO:0005764)
0.0 0.8 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.7 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 0.9 GO:0010287 plastoglobule(GO:0010287)
0.0 0.8 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 0.3 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 1.2 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.0 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.3 1.0 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.3 1.1 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.3 0.8 GO:0070678 preprotein binding(GO:0070678)
0.2 0.9 GO:0033862 UMP kinase activity(GO:0033862)
0.2 0.5 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.1 0.6 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 0.8 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.4 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 1.3 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.3 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.1 0.5 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.3 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.5 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.1 0.4 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 0.6 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 0.9 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 0.6 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.2 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.2 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.1 1.7 GO:0051787 misfolded protein binding(GO:0051787)
0.1 0.4 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 1.1 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 0.2 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.0 0.2 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.3 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.7 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.3 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.0 0.3 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.3 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.0 0.5 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 0.5 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 4.4 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 1.0 GO:0051087 chaperone binding(GO:0051087)
0.0 0.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 1.6 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.2 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.4 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.1 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.7 GO:0016782 transferase activity, transferring sulfur-containing groups(GO:0016782)
0.0 0.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.1 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.0 0.2 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 1.1 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.2 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.0 0.7 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.5 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.5 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0004860 protein kinase inhibitor activity(GO:0004860)
0.0 0.7 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.1 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.8 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.6 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.6 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.5 GO:0005048 signal sequence binding(GO:0005048)
0.0 0.8 GO:0042910 xenobiotic transporter activity(GO:0042910)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 PID ARF 3PATHWAY Arf1 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.0 0.1 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport