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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G61620

Z-value: 1.03

Transcription factors associated with AT5G61620

Gene Symbol Gene ID Gene Info
AT5G61620
AT5G61620 myb-like transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT5G61620arTal_v1_Chr5_+_24772326_24772326-0.107.2e-01Click!

Activity profile of AT5G61620 motif

Sorted Z-values of AT5G61620 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_13016235 1.00 AT4G25470.1
CBF2
C-repeat/DRE binding factor 2
Chr2_+_538250 0.94 AT2G02120.1
PDF2.1
Scorpion toxin-like knottin superfamily protein
Chr1_+_18546086 0.79 AT1G50050.2
AT1G50050.1
AT1G50050
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr5_+_20151163 0.73 AT5G49640.1
AT5G49640
hypothetical protein
Chr5_-_17199793 0.72 AT5G42900.1
AT5G42900.3
AT5G42900.2
COR27
cold regulated protein 27
Chr3_-_82182 0.67 AT3G01260.1
AT3G01260
Galactose mutarotase-like superfamily protein
Chr4_+_18413775 0.64 AT4G39675.1
AT4G39675
hypothetical protein
Chr5_+_15588623 0.64 AT5G38940.2
AT5G38940.1
AT5G38940
RmlC-like cupins superfamily protein
Chr1_-_3481041 0.62 AT1G10550.1
XTH33
xyloglucan:xyloglucosyl transferase 33
Chr1_-_28897120 0.62 AT1G76930.2
EXT4
extensin 4
Chr5_+_21240717 0.62 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr4_-_16285229 0.61 AT4G33980.1
AT4G33980
hypothetical protein
Chr1_-_28896883 0.61 AT1G76930.1
EXT4
extensin 4
Chr4_-_16285059 0.60 AT4G33980.2
AT4G33980
hypothetical protein
Chr4_-_12551331 0.59 AT4G24180.4
AT4G24180.5
AT4G24180.2
AT4G24180.3
AT4G24180.1
AT4G24180.6
TLP1
THAUMATIN-LIKE PROTEIN 1
Chr5_-_5692920 0.58 AT5G17300.2
AT5G17300.1
RVE1
Homeodomain-like superfamily protein
Chr4_+_17515042 0.58 AT4G37220.1
AT4G37220
Cold acclimation protein WCOR413 family
Chr4_+_8827600 0.58 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
Chr4_-_13022996 0.57 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
Chr3_-_15704391 0.57 AT3G43850.2
AT3G43850
hypothetical protein
Chr4_+_16944878 0.55 AT4G35770.1
AT4G35770.2
AT4G35770.5
AT4G35770.6
AT4G35770.4
AT4G35770.3
SEN1
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr1_-_22871298 0.55 AT1G61890.3
AT1G61890.1
AT1G61890.2
AT1G61890
MATE efflux family protein
Chr2_-_7496292 0.53 AT2G17230.1
EXL5
EXORDIUM like 5
Chr3_+_15983199 0.53 AT3G44300.1
NIT2
nitrilase 2
Chr1_+_3777236 0.53 AT1G11260.1
STP1
sugar transporter 1
Chr3_-_7527677 0.52 AT3G21370.1
BGLU19
beta glucosidase 19
Chr2_+_1966806 0.52 AT2G05380.1
AT2G05380.2
GRP3S
glycine-rich protein 3 short isoform
Chr1_+_21652988 0.52 AT1G58340.1
ZF14
MATE efflux family protein
Chr1_+_28668664 0.51 AT1G76410.1
ATL8
RING/U-box superfamily protein
Chr3_+_5212984 0.51 AT3G15450.3
AT3G15450.1
AT3G15450.2
AT3G15450
aluminum induced protein with YGL and LRDR motifs
Chr2_+_1966610 0.51 AT2G05380.3
GRP3S
glycine-rich protein 3 short isoform
Chr3_-_4794417 0.50 AT3G14362.1
RTFL10
ROTUNDIFOLIA like 10
Chr5_-_8406132 0.50 AT5G24570.1
AT5G24575.1
AT5G24570
AT5G24575
hypothetical protein
hypothetical protein
Chr2_+_13987669 0.49 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
Chr1_-_4243201 0.49 AT1G12440.1
AT1G12440.3
AT1G12440
A20/AN1-like zinc finger family protein
Chr1_-_4242963 0.48 AT1G12440.2
AT1G12440
A20/AN1-like zinc finger family protein
Chr5_-_26933286 0.47 AT5G67480.1
AT5G67480.3
BT4
BTB and TAZ domain protein 4
Chr5_-_7250770 0.47 AT5G21940.1
AT5G21940
hybrid signal transduction histidine kinase M-like protein
Chr1_+_6927736 0.46 AT1G19960.1
AT1G19960
transcription factor
Chr4_+_16653704 0.45 AT4G34970.1
ADF9
actin depolymerizing factor 9
Chr4_-_11519805 0.45 AT4G21680.1
NRT1.8
NITRATE TRANSPORTER 1.8
Chr3_-_17910736 0.45 AT3G48360.3
AT3G48360.1
AT3G48360.2
BT2
BTB and TAZ domain protein 2
Chr5_-_26932825 0.45 AT5G67480.2
BT4
BTB and TAZ domain protein 4
Chr1_+_21042951 0.44 AT1G56220.4
AT1G56220.5
AT1G56220.3
AT1G56220
Dormancy/auxin associated family protein
Chr1_+_21043348 0.43 AT1G56220.2
AT1G56220.1
AT1G56220
Dormancy/auxin associated family protein
Chr1_+_3093644 0.43 AT1G09560.1
GLP5
germin-like protein 5
Chr3_+_673428 0.43 AT3G02990.1
HSFA1E
heat shock transcription factor A1E
Chr1_-_11222789 0.43 AT1G31350.1
AT1G31350.2
KUF1
KAR-UP F-box 1
Chr5_+_15878698 0.43 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr5_-_19648362 0.42 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_10184512 0.42 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
Chr5_-_26810116 0.42 AT5G67190.1
DEAR2
DREB and EAR motif protein 2
Chr3_+_5721225 0.42 AT3G16800.3
AT3G16800
Protein phosphatase 2C family protein
Chr3_+_5720941 0.42 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
Chr1_-_28133025 0.41 AT1G74890.1
ARR15
response regulator 15
Chr2_+_8550253 0.41 AT2G19810.1
OZF1
CCCH-type zinc finger family protein
Chr1_+_16263805 0.40 AT1G43160.1
RAP2.6
related to AP2 6
Chr5_+_8584535 0.40 AT5G24920.1
GDU5
glutamine dumper 5
Chr4_-_1046993 0.40 AT4G02380.2
AT4G02380.1
AT4G02380.3
SAG21
senescence-associated gene 21
Chr3_-_4384436 0.40 AT3G13450.1
DIN4
Transketolase family protein
Chr2_+_2029687 0.39 AT2G05530.1
AT2G05530.2
AT2G05530
Glycine-rich protein family
Chr5_-_17831336 0.39 AT5G44260.1
AT5G44260
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr1_-_4651549 0.39 AT1G13600.1
bZIP58
basic leucine-zipper 58
Chr1_-_29459493 0.39 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
Chr3_+_5234457 0.39 AT3G15500.1
NAC3
NAC domain containing protein 3
Chr3_-_15355494 0.39 AT3G43430.1
AT3G43430
RING/U-box superfamily protein
Chr2_-_19412328 0.39 AT2G47270.1
UPB1
transcription factor UPBEAT protein
Chr4_+_13675537 0.38 AT4G27310.1
BBX28
B-box type zinc finger family protein
Chr2_-_17202848 0.38 AT2G41250.1
AT2G41250
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_+_12649985 0.38 AT4G24480.2
AT4G24480.1
AT4G24480.3
AT4G24480
Protein kinase superfamily protein
Chr1_+_27092893 0.38 AT1G71970.1
AT1G71970
hypothetical protein
Chr4_+_5244865 0.38 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
Chr4_-_9331646 0.38 AT4G16563.1
AT4G16563
Eukaryotic aspartyl protease family protein
Chr1_-_2195798 0.38 AT1G07150.2
MAPKKK13
mitogen-activated protein kinase kinase kinase 13
Chr1_+_26400694 0.38 AT1G70090.1
AT1G70090.2
LGT8
glucosyl transferase family 8
Chr2_+_11380463 0.38 AT2G26710.1
BAS1
Cytochrome P450 superfamily protein
Chr2_-_15955752 0.38 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
Chr5_+_22716917 0.37 AT5G56100.1
AT5G56100
glycine-rich protein / oleosin
Chr3_+_4510965 0.37 AT3G13750.1
BGAL1
beta galactosidase 1
Chr3_-_7557969 0.37 AT3G21460.1
AT3G21460
Glutaredoxin family protein
Chr3_-_5297851 0.37 AT3G15630.1
AT3G15630
plant/protein
Chr5_-_7054713 0.37 AT5G20830.1
SUS1
sucrose synthase 1
Chr5_-_7055398 0.37 AT5G20830.2
SUS1
sucrose synthase 1
Chr5_-_7054281 0.37 AT5G20830.3
SUS1
sucrose synthase 1
Chr5_-_20016857 0.37 AT5G49360.1
BXL1
beta-xylosidase 1
Chr5_-_23263457 0.37 AT5G57400.1
AT5G57400.2
AT5G57400
transmembrane protein
Chr5_+_17984527 0.37 AT5G44585.1
AT5G44585
hypothetical protein
Chr1_+_18876810 0.36 AT1G50930.2
AT1G50930.1
AT1G50930
Serine/Threonine-kinase
Chr1_+_25701770 0.36 AT1G68500.1
AT1G68500
hypothetical protein
Chr1_-_2195996 0.36 AT1G07150.1
MAPKKK13
mitogen-activated protein kinase kinase kinase 13
Chr3_+_8313334 0.36 AT3G23260.1
AT3G23260
F-box and associated interaction domains-containing protein
Chr5_+_20130752 0.36 AT5G49600.1
AT5G49600
plant/protein (Protein of unknown function, DUF538)
Chr5_-_22115539 0.36 AT5G54470.1
BBX29
B-box type zinc finger family protein
Chr1_+_15891281 0.36 AT1G42430.1
AT1G42430.2
AT1G42430
inactive purple acid phosphatase-like protein
Chr3_+_19880504 0.36 AT3G53620.1
PPa4
pyrophosphorylase 4
Chr5_-_19504534 0.35 AT5G48110.1
AT5G48110
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Chr3_-_16625043 0.35 AT3G45300.1
IVD
isovaleryl-CoA-dehydrogenase
Chr1_-_13456336 0.35 AT1G36060.1
AT1G36060
Integrase-type DNA-binding superfamily protein
Chr1_-_10475969 0.35 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
Chr1_-_10356482 0.35 AT1G29640.1
AT1G29640
senescence regulator (Protein of unknown function, DUF584)
Chr1_+_26122080 0.35 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
Chr5_-_5947464 0.34 AT5G17960.1
AT5G17960
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_3444360 0.34 AT1G10470.1
ARR4
response regulator 4
Chr1_-_3443957 0.34 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
Chr3_+_2347186 0.34 AT3G07350.1
AT3G07350
sulfate/thiosulfate import ATP-binding protein, putative (DUF506)
Chr1_-_28383769 0.34 AT1G75590.1
AT1G75590
SAUR-like auxin-responsive protein family
Chr1_+_18542061 0.34 AT1G50040.1
AT1G50040
formin-like protein, putative (DUF1005)
Chr1_-_22067076 0.34 AT1G59940.1
ARR3
response regulator 3
Chr4_+_16066987 0.34 AT4G33355.1
AT4G33355.2
AT4G33355
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_7455009 0.34 AT1G21310.1
EXT3
extensin 3
Chr2_-_17837618 0.34 AT2G42870.1
PAR1
phy rapidly regulated 1
Chr5_-_9944942 0.34 AT5G27920.1
AT5G27920
F-box family protein
Chr3_+_3203988 0.33 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
Chr2_+_13241345 0.33 AT2G31082.1
CLE7
CLAVATA3/ESR-RELATED 7
Chr5_-_20940895 0.33 AT5G51550.1
EXL3
EXORDIUM like 3
Chr2_+_7703805 0.33 AT2G17730.1
AT2G17730.2
NIP2
NEP-interacting protein 2
Chr3_-_19139423 0.33 AT3G51600.1
LTP5
lipid transfer protein 5
Chr5_-_9366963 0.33 AT5G26620.1
AT5G26620
hypothetical protein
Chr2_-_14310608 0.33 AT2G33830.2
AT2G33830
Dormancy/auxin associated family protein
Chr1_-_22067233 0.33 AT1G59940.2
ARR3
response regulator 3
Chr4_-_947075 0.33 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr5_-_4554597 0.33 AT5G14110.1
AT5G14110
peroxidase (DUF 3339)
Chr5_+_2167468 0.33 AT5G06980.4
AT5G06980.3
AT5G06980.5
AT5G06980.2
AT5G06980
hypothetical protein
Chr2_+_15056753 0.32 AT2G35850.1
AT2G35850
transmembrane protein
Chr1_-_27509272 0.32 AT1G73165.1
CLE1
CLAVATA3/ESR-RELATED 1
Chr2_-_14310339 0.32 AT2G33830.1
AT2G33830
Dormancy/auxin associated family protein
Chr4_+_10211577 0.32 AT4G18510.1
CLE2
CLAVATA3/ESR-related 2
Chr1_-_2406049 0.32 AT1G07750.1
AT1G07750
RmlC-like cupins superfamily protein
Chr4_-_14393381 0.32 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr4_-_17530589 0.32 AT4G37250.1
AT4G37250
Leucine-rich repeat protein kinase family protein
Chr5_+_8541713 0.32 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
Chr1_+_10477885 0.32 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr5_+_2167120 0.32 AT5G06980.1
AT5G06980
hypothetical protein
Chr1_+_27241696 0.32 AT1G72360.2
AT1G72360.3
AT1G72360.1
ERF73
Integrase-type DNA-binding superfamily protein
Chr2_+_9917443 0.32 AT2G23310.1
AT2G23310.2
ATRER1C1
Rer1 family protein
Chr4_+_8925571 0.32 AT4G15660.1
AT4G15660
Thioredoxin superfamily protein
Chr2_-_17115047 0.31 AT2G41010.1
CAMBP25
calmodulin (CAM)-binding protein of 25 kDa
Chr1_-_22363854 0.31 AT1G60750.1
AT1G60750
NAD(P)-linked oxidoreductase superfamily protein
Chr3_-_4358826 0.31 AT3G13403.1
AT3G13403
Defensin-like (DEFL) family protein
Chr5_-_17626487 0.31 AT5G43840.1
HSFA6A
heat shock transcription factor A6A
Chr4_-_16942060 0.31 AT4G35750.1
AT4G35750
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr1_-_19762560 0.31 AT1G53035.2
AT1G53035.1
AT1G53035
transmembrane protein
Chr5_-_19291103 0.31 AT5G47560.1
TDT
tonoplast dicarboxylate transporter
Chr1_-_6904155 0.31 AT1G19880.1
AT1G19880
Regulator of chromosome condensation (RCC1) family protein
Chr1_+_29214220 0.31 AT1G77730.1
AT1G77730
Pleckstrin homology (PH) domain superfamily protein
Chr3_-_18469962 0.30 AT3G49790.1
AT3G49790
Carbohydrate-binding protein
Chr1_-_6782216 0.30 AT1G19610.1
PDF1.4
defensin-like protein
Chr1_-_8189220 0.30 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
AST91
sulfate transporter 91
Chr5_-_6617047 0.30 AT5G19600.1
SULTR3%3B5
sulfate transporter 3;5
Chr4_+_10142255 0.30 AT4G18350.1
NCED2
nine-cis-epoxycarotenoid dioxygenase 2
Chr4_-_1203380 0.30 AT4G02715.1
AT4G02715.2
AT4G02715
flocculation FLO11-like protein
Chr4_-_947249 0.30 AT4G02130.1
GATL6
galacturonosyltransferase 6
Chr5_+_16323567 0.30 AT5G40780.1
LHT1
lysine histidine transporter 1
Chr1_+_27402814 0.30 AT1G72820.1
AT1G72820.2
AT1G72820
Mitochondrial substrate carrier family protein
Chr1_-_4882003 0.30 AT1G14290.2
SBH2
sphingoid base hydroxylase 2
Chr1_-_4882265 0.30 AT1G14290.1
SBH2
sphingoid base hydroxylase 2
Chr2_-_14047063 0.29 AT2G33130.1
RALFL18
ralf-like 18
Chr3_+_1593668 0.29 AT3G05500.2
AT3G05500
Rubber elongation factor protein (REF)
Chr1_+_24028830 0.29 AT1G64660.1
MGL
methionine gamma-lyase
Chr5_+_16324310 0.29 AT5G40780.2
AT5G40780.3
LHT1
lysine histidine transporter 1
Chr1_-_11595982 0.29 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
Chr5_-_22896734 0.28 AT5G56550.1
OXS3
oxidative stress 3
Chr3_+_5934033 0.28 AT3G17350.1
AT3G17350.2
AT3G17350
wall-associated receptor kinase carboxy-terminal protein
Chr1_-_28218801 0.28 AT1G75180.3
AT1G75180.2
AT1G75180.4
AT1G75180
Erythronate-4-phosphate dehydrogenase family protein
Chr5_-_26246960 0.28 AT5G65660.1
AT5G65660
hydroxyproline-rich glycoprotein family protein
Chr2_-_18191280 0.28 AT2G43920.3
AT2G43920.4
AT2G43920.1
AT2G43920.2
HOL2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_1593182 0.28 AT3G05500.1
AT3G05500
Rubber elongation factor protein (REF)
Chr1_+_20577377 0.28 AT1G55160.1
AT1G55160
WAS/WASL-interacting family protein
Chr2_-_15137012 0.28 AT2G36050.1
OFP15
ovate family protein 15
Chr4_-_7786161 0.28 AT4G13395.1
RTFL12
ROTUNDIFOLIA like 12
Chr5_+_904693 0.28 AT5G03570.4
IREG2
iron regulated 2
Chr5_+_21069495 0.28 AT5G51830.2
AT5G51830
pfkB-like carbohydrate kinase family protein
Chr5_+_21069110 0.27 AT5G51830.1
AT5G51830
pfkB-like carbohydrate kinase family protein
Chr5_-_6976036 0.27 AT5G20630.1
GER3
germin 3
Chr3_+_22373013 0.27 AT3G60530.1
GATA4
GATA transcription factor 4
Chr2_+_17728479 0.27 AT2G42580.1
TTL3
tetratricopetide-repeat thioredoxin-like 3
Chr4_-_857401 0.27 AT4G01970.2
STS
stachyose synthase
Chr4_-_17355891 0.27 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr5_+_903470 0.27 AT5G03570.1
AT5G03570.3
IREG2
iron regulated 2
Chr4_-_10132180 0.27 AT4G18340.2
AT4G18340.1
AT4G18340
Glycosyl hydrolase superfamily protein
Chr2_+_11041331 0.27 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_-_10264065 0.27 AT2G24140.3
AT2G24140.1
AT2G24140.4
AT2G24140.2
AT2G24140
myosin-J heavy chain-like protein (Protein of unknown function, DUF593)
Chr3_-_11384145 0.27 AT3G29575.1
AT3G29575.4
AT3G29575.3
AFP3
ABI five binding protein 3
Chr4_+_2509053 0.27 AT4G04930.1
DES-1-LIKE
fatty acid desaturase family protein
Chr2_+_17221840 0.27 AT2G41310.1
RR3
response regulator 3
Chr1_+_29272074 0.27 AT1G77850.1
AT1G77850.2
ARF17
auxin response factor 17
Chr4_+_13275200 0.27 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr2_+_19253670 0.27 AT2G46860.1
PPa3
pyrophosphorylase 3
Chr1_-_29993724 0.27 AT1G79700.1
AT1G79700.3
AT1G79700.2
WRI4
Integrase-type DNA-binding superfamily protein
Chr5_+_903756 0.27 AT5G03570.2
IREG2
iron regulated 2
Chr5_+_22318305 0.27 AT5G55000.2
AT5G55000.1
FIP2
potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein
Chr1_-_11108095 0.26 AT1G31120.1
KUP10
K+ uptake permease 10
Chr2_-_18646606 0.26 AT2G45220.1
AT2G45220
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_18727504 0.26 AT2G45430.1
AHL22
AT-hook motif nuclear-localized protein 22
Chr1_-_4328546 0.26 AT1G12710.2
AT1G12710.1
PP2-A12
phloem protein 2-A12
Chr5_+_20644525 0.26 AT5G50760.1
AT5G50760
SAUR-like auxin-responsive protein family
Chr1_-_29011247 0.26 AT1G77210.3
AT1G77210.2
STP14
sugar transporter 14
Chr4_-_14733628 0.26 AT4G30120.1
HMA3
heavy metal atpase 3
Chr3_+_1727151 0.26 AT3G05800.1
AIF1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
Chr4_+_131422 0.26 AT4G00305.1
AT4G00305
RING/U-box superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G61620

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0055068 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.2 1.1 GO:0072708 response to sorbitol(GO:0072708)
0.2 0.8 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.2 0.7 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.4 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.6 GO:0006097 glyoxylate cycle(GO:0006097)
0.1 0.3 GO:0035461 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.1 0.3 GO:0006210 thymine catabolic process(GO:0006210) thymine metabolic process(GO:0019859)
0.1 0.6 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.6 GO:0043090 amino acid import(GO:0043090)
0.1 0.2 GO:0017145 stem cell division(GO:0017145)
0.1 0.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.3 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.3 GO:0009305 protein biotinylation(GO:0009305)
0.1 0.3 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.1 0.3 GO:0019343 cysteine biosynthetic process via cystathionine(GO:0019343)
0.1 0.3 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.5 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.1 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.3 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.1 0.2 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 0.2 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.1 0.2 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.4 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.1 0.3 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.5 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.1 1.0 GO:1902074 response to salt(GO:1902074)
0.1 0.3 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.9 GO:0009750 response to fructose(GO:0009750)
0.1 0.2 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.1 0.2 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.1 0.4 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) amino acid export(GO:0032973) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 0.4 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.2 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.3 GO:0043409 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.1 0.4 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.2 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 0.2 GO:0071836 nectar secretion(GO:0071836)
0.1 0.2 GO:0045979 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.1 0.1 GO:0051972 regulation of telomerase activity(GO:0051972)
0.1 0.4 GO:0048830 adventitious root development(GO:0048830)
0.1 0.3 GO:0009245 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.1 0.6 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.0 0.0 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.0 0.2 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.2 GO:0050993 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.0 0.3 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.0 0.2 GO:1901600 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.0 0.1 GO:0010288 response to lead ion(GO:0010288)
0.0 0.4 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.1 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.0 0.1 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.0 0.3 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.1 GO:0043132 NAD transport(GO:0043132)
0.0 0.1 GO:0033530 raffinose metabolic process(GO:0033530)
0.0 0.2 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.6 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.1 GO:0050685 positive regulation of mRNA processing(GO:0050685) regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.0 0.1 GO:0055089 fatty acid homeostasis(GO:0055089)
0.0 0.2 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 2.8 GO:0071368 cellular response to cytokinin stimulus(GO:0071368)
0.0 0.3 GO:0031222 arabinan catabolic process(GO:0031222)
0.0 0.2 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.4 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.1 GO:0002119 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 0.8 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.3 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.0 0.7 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.0 0.3 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.5 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.1 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.0 1.4 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.1 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.0 2.1 GO:0009631 cold acclimation(GO:0009631)
0.0 0.3 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.0 0.4 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 0.1 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116) negative regulation of isoprenoid metabolic process(GO:0045827)
0.0 0.1 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.0 0.8 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.2 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 1.2 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.1 GO:0030638 polyketide metabolic process(GO:0030638)
0.0 0.3 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.3 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.1 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.0 0.5 GO:0006826 iron ion transport(GO:0006826)
0.0 0.5 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.1 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.0 0.1 GO:0001113 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.0 0.2 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.1 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.1 GO:0042539 hypotonic salinity response(GO:0042539)
0.0 0.6 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.1 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.0 0.1 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.1 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.0 0.2 GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement(GO:1901527)
0.0 0.0 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.3 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.4 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.1 GO:0009304 tRNA transcription(GO:0009304)
0.0 0.1 GO:0009866 induced systemic resistance, ethylene mediated signaling pathway(GO:0009866)
0.0 0.1 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.0 0.4 GO:0015770 sucrose transport(GO:0015770)
0.0 0.3 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.1 GO:0009233 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.0 0.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.0 0.3 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.1 GO:0042040 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.0 0.1 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.0 0.1 GO:0046386 deoxyribonucleoside triphosphate catabolic process(GO:0009204) deoxyribose phosphate catabolic process(GO:0046386)
0.0 0.8 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.0 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.0 0.4 GO:0015743 malate transport(GO:0015743)
0.0 0.2 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.1 GO:1902932 positive regulation of alcohol biosynthetic process(GO:1902932)
0.0 0.2 GO:0036065 fucosylation(GO:0036065)
0.0 0.0 GO:0040014 regulation of multicellular organism growth(GO:0040014)
0.0 0.1 GO:0010062 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of cell fate commitment(GO:0010454) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.0 0.1 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.0 0.3 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.0 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.0 0.1 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.2 GO:1902222 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.0 0.6 GO:0019915 lipid storage(GO:0019915)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.3 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 0.1 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.0 0.1 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.0 0.1 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.0 0.4 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.2 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.2 GO:0032366 intracellular sterol transport(GO:0032366)
0.0 0.1 GO:0034969 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.0 0.4 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.1 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.0 0.6 GO:0008643 carbohydrate transport(GO:0008643)
0.0 0.3 GO:0055069 zinc ion homeostasis(GO:0055069)
0.0 0.1 GO:0010107 potassium ion import(GO:0010107) potassium ion import across plasma membrane(GO:1990573)
0.0 0.1 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.5 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.1 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.0 0.5 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.1 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.0 0.1 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 0.2 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.1 GO:0010390 histone monoubiquitination(GO:0010390)
0.0 0.1 GO:0071277 cellular response to calcium ion(GO:0071277)
0.0 1.4 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.2 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.1 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.0 0.2 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.0 0.1 GO:0019323 pentose catabolic process(GO:0019323)
0.0 0.2 GO:0080027 response to herbivore(GO:0080027)
0.0 0.2 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.1 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 0.1 GO:0071431 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0 0.1 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 0.1 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.0 GO:0071457 cellular response to ozone(GO:0071457)
0.0 0.6 GO:2000028 regulation of photoperiodism, flowering(GO:2000028)
0.0 0.0 GO:0001578 microtubule bundle formation(GO:0001578)
0.0 0.2 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.0 0.4 GO:0042631 cellular response to water deprivation(GO:0042631)
0.0 0.0 GO:0015700 arsenite transport(GO:0015700)
0.0 0.6 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.1 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.1 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.1 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.0 0.1 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 1.4 GO:0009739 response to gibberellin(GO:0009739)
0.0 0.3 GO:0010214 seed coat development(GO:0010214)
0.0 0.1 GO:1902101 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 0.6 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.1 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.2 GO:0015936 coenzyme A metabolic process(GO:0015936)
0.0 0.0 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.0 0.0 GO:0080058 protein deglutathionylation(GO:0080058)
0.0 0.1 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 0.0 GO:0080171 lytic vacuole organization(GO:0080171)
0.0 1.3 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.1 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.0 0.1 GO:0071901 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of protein serine/threonine kinase activity(GO:0071901) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 0.1 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.0 0.1 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.0 0.8 GO:0006885 regulation of pH(GO:0006885)
0.0 0.2 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.3 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.4 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.0 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.0 0.0 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.0 0.1 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 0.1 GO:0009819 drought recovery(GO:0009819)
0.0 0.2 GO:0010229 inflorescence development(GO:0010229)
0.0 0.1 GO:0043486 histone exchange(GO:0043486)
0.0 0.0 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.0 0.2 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.5 GO:0009846 pollen germination(GO:0009846)
0.0 0.1 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.0 GO:0090065 regulation of production of siRNA involved in RNA interference(GO:0090065)
0.0 0.1 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 0.1 GO:0009435 NAD biosynthetic process(GO:0009435)
0.0 0.0 GO:2000653 regulation of genetic imprinting(GO:2000653)
0.0 0.0 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.0 0.1 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.1 GO:1900034 regulation of cellular response to heat(GO:1900034)
0.0 0.0 GO:0051211 anisotropic cell growth(GO:0051211)
0.0 0.3 GO:1901421 positive regulation of response to alcohol(GO:1901421)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0070505 pollen coat(GO:0070505)
0.1 0.6 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 0.3 GO:0016461 unconventional myosin complex(GO:0016461)
0.1 0.3 GO:0000839 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.1 0.2 GO:0005712 chiasma(GO:0005712)
0.1 0.4 GO:0030062 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.1 0.3 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.1 0.4 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.3 GO:0071818 BAT3 complex(GO:0071818)
0.0 0.3 GO:0005776 autophagosome(GO:0005776)
0.0 0.1 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.0 0.3 GO:0090395 plant cell papilla(GO:0090395)
0.0 0.2 GO:0030141 secretory granule(GO:0030141)
0.0 0.1 GO:0070382 exocytic vesicle(GO:0070382)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.1 GO:0009514 glyoxysome(GO:0009514)
0.0 0.2 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.7 GO:0031350 intrinsic component of plastid membrane(GO:0031350) integral component of plastid membrane(GO:0031351)
0.0 0.1 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.0 0.1 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.1 GO:0097361 CIA complex(GO:0097361)
0.0 0.2 GO:0055038 recycling endosome membrane(GO:0055038)
0.0 0.1 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.0 0.2 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.1 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.2 GO:0071256 translocon complex(GO:0071256)
0.0 0.1 GO:0030132 clathrin coat of coated pit(GO:0030132)
0.0 0.3 GO:0031902 late endosome membrane(GO:0031902)
0.0 0.4 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.1 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 0.1 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.3 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 1.8 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.1 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.0 0.1 GO:0044545 NSL complex(GO:0044545)
0.0 0.0 GO:0035371 microtubule plus-end(GO:0035371)
0.0 0.5 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.1 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.1 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.9 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.1 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.1 GO:0005688 U6 snRNP(GO:0005688)
0.0 0.3 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.1 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 0.2 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.3 0.8 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.2 0.6 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.1 0.4 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.1 0.6 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.1 0.5 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.9 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.6 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.1 0.3 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.1 0.6 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.4 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.5 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.1 1.8 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.1 GO:0015665 alcohol transmembrane transporter activity(GO:0015665)
0.1 0.4 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.1 0.3 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.1 0.3 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.1 0.6 GO:0010011 auxin binding(GO:0010011)
0.1 0.3 GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.1 0.6 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.4 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.1 0.3 GO:0050162 oxalate oxidase activity(GO:0050162)
0.1 0.2 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.1 0.4 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.1 0.2 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.1 1.1 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.2 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.1 0.3 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 2.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.4 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.1 0.2 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.3 GO:0035197 siRNA binding(GO:0035197)
0.1 0.8 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.2 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.1 0.7 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.3 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 1.9 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.2 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.3 GO:0030544 Hsp70 protein binding(GO:0030544)
0.0 0.3 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.9 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.2 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.0 0.3 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.1 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.0 0.3 GO:0050551 myrcene synthase activity(GO:0050551)
0.0 0.3 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.1 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.0 0.1 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.0 0.7 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 0.3 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.3 GO:0052853 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.0 0.1 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.0 0.2 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.1 GO:0032791 lead ion binding(GO:0032791)
0.0 0.3 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.3 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.0 0.4 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.3 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.1 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.2 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.0 0.1 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.0 0.1 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.0 0.1 GO:0008936 nicotinamidase activity(GO:0008936)
0.0 0.9 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.0 0.3 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.1 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.1 GO:0035615 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.1 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.0 0.2 GO:0009884 cytokinin receptor activity(GO:0009884)
0.0 0.1 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.1 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.0 0.2 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.2 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.1 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 0.3 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.2 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.1 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.0 0.1 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.0 0.1 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.0 0.1 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.1 GO:0010334 sesquiterpene synthase activity(GO:0010334)
0.0 0.1 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.0 0.1 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.0 0.2 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.1 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.0 0.2 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.1 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.0 0.3 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.0 0.1 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.0 0.1 GO:0017048 Rho GTPase binding(GO:0017048)
0.0 0.1 GO:0004156 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.0 0.1 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.0 0.1 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.2 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.1 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.0 0.1 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.0 0.1 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.2 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.1 GO:0042299 lupeol synthase activity(GO:0042299)
0.0 0.1 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 1.5 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.2 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.5 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.3 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.8 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.1 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.0 0.3 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.1 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.2 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.0 0.5 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 0.0 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 0.2 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 0.2 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.1 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 0.1 GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity(GO:0051748)
0.0 0.2 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.0 0.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.1 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.0 0.5 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.1 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.2 GO:0008061 chitin binding(GO:0008061)
0.0 0.9 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.0 0.1 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.0 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.1 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.5 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.0 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.0 0.1 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.0 0.1 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.2 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.2 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.4 GO:0005179 hormone activity(GO:0005179)
0.0 0.1 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.2 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.1 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0 0.0 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 0.1 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.1 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.1 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.1 0.2 PID INTEGRIN A9B1 PATHWAY Alpha9 beta1 integrin signaling events
0.1 0.3 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.1 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.0 0.1 PID INTEGRIN3 PATHWAY Beta3 integrin cell surface interactions
0.0 0.1 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.0 PID PI3KCI PATHWAY Class I PI3K signaling events
0.0 0.1 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.1 PID MTOR 4PATHWAY mTOR signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.1 0.1 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.1 0.3 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 0.3 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
0.1 0.5 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.1 0.3 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.0 0.2 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.0 0.1 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.0 0.2 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.0 0.2 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.0 0.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF
0.0 0.1 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 0.1 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.0 0.0 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint