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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G58850

Z-value: 1.51

Transcription factors associated with AT5G58850

Gene Symbol Gene ID Gene Info
AT5G58850
AT5G58850 myb domain protein 119

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB119arTal_v1_Chr5_+_23763945_237639450.421.3e-01Click!

Activity profile of AT5G58850 motif

Sorted Z-values of AT5G58850 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_4408925 1.62 AT3G13520.1
AGP12
arabinogalactan protein 12
Chr5_-_8406132 1.55 AT5G24570.1
AT5G24575.1
AT5G24570
AT5G24575
hypothetical protein
hypothetical protein
Chr2_+_13674255 1.51 AT2G32190.2
AT2G32190.1
AT2G32190
cysteine-rich/transmembrane domain A-like protein
Chr5_+_3783930 1.49 AT5G11740.1
AGP15
arabinogalactan protein 15
Chr2_-_15014147 1.45 AT2G35710.3
AT2G35710.4
AT2G35710.1
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
Chr4_-_16644928 1.45 AT4G34950.1
AT4G34950
Major facilitator superfamily protein
Chr4_-_12886695 1.41 AT4G25100.1
AT4G25100.3
AT4G25100.4
FSD1
Fe superoxide dismutase 1
Chr4_+_13275200 1.39 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr2_+_11773187 1.38 AT2G27550.1
ATC
centroradiali
Chr2_-_16780368 1.36 AT2G40170.1
GEA6
Stress induced protein
Chr3_-_8450799 1.35 AT3G23550.1
AT3G23550
MATE efflux family protein
Chr3_+_6840281 1.28 AT3G19680.1
AT3G19680
hypothetical protein (DUF1005)
Chr5_+_26772644 1.27 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
Chr1_+_12851983 1.27 AT1G35140.1
PHI-1
Phosphate-responsive 1 family protein
Chr1_-_59215 1.22 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr4_-_7417873 1.21 AT4G12510.1
AT4G12510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_1046993 1.19 AT4G02380.2
AT4G02380.1
AT4G02380.3
SAG21
senescence-associated gene 21
Chr2_-_19352088 1.19 AT2G47140.1
SDR5
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_3857780 1.17 AT3G12110.1
ACT11
actin-11
Chr4_-_7410406 1.16 AT4G12490.1
AT4G12490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_9844134 1.16 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
Chr3_+_21261046 1.15 AT3G57450.1
AT3G57450
hypothetical protein
Chr4_-_12886902 1.15 AT4G25100.2
AT4G25100.5
FSD1
Fe superoxide dismutase 1
Chr3_-_4834015 1.13 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
Chr5_+_25721733 1.12 AT5G64310.1
AGP1
arabinogalactan protein 1
Chr3_-_10590685 1.11 AT3G28340.1
GATL10
galacturonosyltransferase-like 10
Chr5_-_16995062 1.11 AT5G42500.1
AT5G42500
Disease resistance-responsive (dirigent-like protein) family protein
Chr2_+_11809279 1.11 AT2G27690.1
CYP94C1
cytochrome P450, family 94, subfamily C, polypeptide 1
Chr4_-_17041131 1.10 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr1_+_5940292 1.10 AT1G17345.1
AT1G17345
SAUR-like auxin-responsive protein family
Chr5_-_25843555 1.10 AT5G64660.1
CMPG2
CYS, MET, PRO, and GLY protein 2
Chr4_+_17524461 1.10 AT4G37240.1
AT4G37240
HTH-type transcriptional regulator
Chr4_-_17041326 1.09 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr4_+_16185044 1.09 AT4G33730.1
AT4G33730
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr4_+_18525042 1.08 AT4G39950.2
CYP79B2
cytochrome P450, family 79, subfamily B, polypeptide 2
Chr5_-_21125065 1.08 AT5G52020.1
AT5G52020
Integrase-type DNA-binding superfamily protein
Chr4_+_18525246 1.08 AT4G39950.1
CYP79B2
cytochrome P450, family 79, subfamily B, polypeptide 2
Chr2_-_17115047 1.07 AT2G41010.1
CAMBP25
calmodulin (CAM)-binding protein of 25 kDa
Chr1_+_116784 1.05 AT1G01300.1
AT1G01300
Eukaryotic aspartyl protease family protein
Chr1_+_22073352 1.04 AT1G59970.1
AT1G59970
Matrixin family protein
Chr1_+_3273753 1.03 AT1G10030.1
ERG28
ergosterol biosynthesis protein
Chr4_+_14368877 1.03 AT4G29140.1
ADS1
MATE efflux family protein
Chr1_+_1425539 1.03 AT1G05000.3
AT1G05000.1
AT1G05000.2
PFA-DSP1
Phosphotyrosine protein phosphatases superfamily protein
Chr1_+_19619724 1.03 AT1G52690.2
AT1G52690.1
LEA7
Late embryogenesis abundant protein (LEA) family protein
Chr3_+_9409160 1.03 AT3G25780.1
AOC3
allene oxide cyclase 3
Chr2_-_16499524 1.02 AT2G39530.1
AT2G39530
Uncharacterized protein family (UPF0497)
Chr4_-_947075 1.02 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr4_-_16806830 1.01 AT4G35320.1
AT4G35320
hypothetical protein
Chr4_+_7758275 1.01 AT4G13340.1
LRX3
Leucine-rich repeat (LRR) family protein
Chr4_+_10521259 1.00 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
Chr1_+_5638779 1.00 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
Chr1_-_5645443 1.00 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr5_-_7026533 0.99 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_+_16202142 0.99 AT5G40460.1
AT5G40460
cyclin-dependent kinase inhibitor SMR3-like protein
Chr5_-_18506382 0.98 AT5G45630.1
AT5G45630
senescence regulator (Protein of unknown function, DUF584)
Chr5_-_7026753 0.98 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_-_15013368 0.98 AT2G35710.2
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
Chr3_-_15617149 0.97 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_22721373 0.97 AT5G56120.1
AT5G56120
RNA polymerase II elongation factor
Chr5_-_9242854 0.96 AT5G26330.1
AT5G26330
Cupredoxin superfamily protein
Chr3_-_17008528 0.96 AT3G46280.1
AT3G46280
kinase-like protein
Chr2_-_14592140 0.94 AT2G34650.1
PID
Protein kinase superfamily protein
Chr5_+_21943983 0.94 AT5G54070.1
HSFA9
heat shock transcription factor A9
Chr3_-_6980523 0.94 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr2_-_16908152 0.93 AT2G40475.1
ASG8
hypothetical protein
Chr2_+_18567852 0.93 AT2G45010.2
AT2G45010.1
AT2G45010
PLAC8 family protein
Chr1_+_954290 0.93 AT1G03790.1
SOM
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_-_17992047 0.93 AT2G43290.1
MSS3
Calcium-binding EF-hand family protein
Chr4_-_947249 0.92 AT4G02130.1
GATL6
galacturonosyltransferase 6
Chr3_-_15617309 0.92 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_6728747 0.91 AT1G19440.1
KCS4
3-ketoacyl-CoA synthase 4
Chr1_-_30280359 0.90 AT1G80530.1
AT1G80530
Major facilitator superfamily protein
Chr4_+_8937358 0.90 AT4G15700.1
AT4G15700
Thioredoxin superfamily protein
Chr2_-_14489767 0.90 AT2G34340.1
AT2G34340
senescence regulator (Protein of unknown function, DUF584)
Chr5_+_5899046 0.90 AT5G17850.2
AT5G17850
Sodium/calcium exchanger family protein
Chr4_-_7493080 0.90 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr2_+_11037303 0.89 AT2G25890.2
AT2G25890.1
AT2G25890
Oleosin family protein
Chr5_+_5898852 0.89 AT5G17850.1
AT5G17850
Sodium/calcium exchanger family protein
Chr4_+_15230008 0.89 AT4G31380.1
FLP1
flowering-promoting factor-like protein
Chr3_-_3108266 0.88 AT3G10080.1
AT3G10080.2
AT3G10080
RmlC-like cupins superfamily protein
Chr2_-_16497145 0.88 AT2G39518.1
AT2G39518
Uncharacterized protein family (UPF0497)
Chr5_+_8584535 0.88 AT5G24920.1
GDU5
glutamine dumper 5
Chr5_-_1217362 0.87 AT5G04340.1
ZAT6
6
Chr1_+_6697874 0.87 AT1G19380.1
AT1G19380
sugar, putative (DUF1195)
Chr3_-_22256177 0.87 AT3G60220.1
ATL4
TOXICOS EN LEVADURA 4
Chr4_+_15098041 0.87 AT4G30993.2
AT4G30993.1
AT4G30993.3
AT4G30993
Calcineurin-like metallo-phosphoesterase superfamily protein
Chr3_+_5692607 0.87 AT3G16720.1
ATL2
TOXICOS EN LEVADURA 2
Chr1_+_7238693 0.87 AT1G20823.1
AT1G20823
RING/U-box superfamily protein
Chr5_+_15256243 0.87 AT5G38200.2
AT5G38200.3
AT5G38200.1
AT5G38200
Class I glutamine amidotransferase-like superfamily protein
Chr1_+_486800 0.86 AT1G02400.1
AT1G02400.2
GA2OX6
gibberellin 2-oxidase 6
Chr2_+_7209108 0.86 AT2G16630.1
AT2G16630
Pollen Ole e 1 allergen and extensin family protein
Chr1_+_1529767 0.85 AT1G05260.1
RCI3
Peroxidase superfamily protein
Chr3_-_9464676 0.85 AT3G25870.1
AT3G25870
hypothetical protein
Chr3_+_10911132 0.85 AT3G28910.1
AT3G28910.2
MYB30
myb domain protein 30
Chr5_+_25268950 0.84 AT5G62960.1
AT5G62960.2
AT5G62960
UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein
Chr4_-_12551331 0.84 AT4G24180.4
AT4G24180.5
AT4G24180.2
AT4G24180.3
AT4G24180.1
AT4G24180.6
TLP1
THAUMATIN-LIKE PROTEIN 1
Chr2_-_15790139 0.83 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr2_-_18914739 0.83 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr5_-_5310951 0.83 AT5G16250.1
AT5G16250
transmembrane protein
Chr1_+_26852406 0.82 AT1G71230.1
AT1G71230.2
CSN5B
COP9-signalosome 5B
Chr2_-_15474717 0.82 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
Chr5_+_22808641 0.82 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr5_+_7676938 0.82 AT5G22940.2
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr5_+_25703649 0.82 AT5G64260.1
EXL2
EXORDIUM like 2
Chr4_-_15954803 0.82 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr5_-_4069094 0.82 AT5G12880.1
AT5G12880
proline-rich family protein
Chr5_+_6826365 0.82 AT5G20230.1
BCB
blue-copper-binding protein
Chr5_+_7676662 0.81 AT5G22940.1
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr4_+_10703348 0.81 AT4G19680.1
AT4G19680.2
IRT2
iron regulated transporter 2
Chr1_-_6268828 0.81 AT1G18210.2
AT1G18210.1
AT1G18210
Calcium-binding EF-hand family protein
Chr5_+_18681326 0.81 AT5G46060.1
AT5G46060
spastin, putative (Protein of unknown function, DUF599)
Chr1_+_23168767 0.80 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr1_+_25926849 0.80 AT1G68945.1
AT1G68945
hypothetical protein
Chr4_-_10934225 0.80 AT4G20240.1
AT4G20240.2
CYP71A27
cytochrome P450, family 71, subfamily A, polypeptide 27
Chr5_+_26818949 0.79 AT5G67210.1
IRX15-L
IRREGULAR XYLEM protein (DUF579)
Chr2_+_11566288 0.78 AT2G27080.1
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_+_17728479 0.78 AT2G42580.1
TTL3
tetratricopetide-repeat thioredoxin-like 3
Chr2_+_19229070 0.78 AT2G46780.1
AT2G46780.2
AT2G46780
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_+_14192569 0.78 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
Chr2_-_15789605 0.78 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr4_+_7210807 0.78 AT4G12030.4
AT4G12030.3
AT4G12030.2
AT4G12030.1
BAT5
bile acid transporter 5
Chr5_-_7820760 0.77 AT5G23220.1
NIC3
nicotinamidase 3
Chr1_-_9956960 0.77 AT1G28370.1
AT1G28370.2
ERF11
ERF domain protein 11
Chr1_+_7696427 0.77 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
Chr1_-_22871298 0.77 AT1G61890.3
AT1G61890.1
AT1G61890.2
AT1G61890
MATE efflux family protein
Chr2_-_16804823 0.77 AT2G40230.1
AT2G40230
HXXXD-type acyl-transferase family protein
Chr3_+_4104463 0.77 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_23420145 0.77 AT3G63430.2
AT3G63430.1
TRM5
zinc finger CCCH domain protein
Chr4_-_846792 0.76 AT4G01950.1
AT4G01950.2
GPAT3
glycerol-3-phosphate acyltransferase 3
Chr2_-_17438168 0.76 AT2G41800.1
AT2G41800
imidazolonepropionase (Protein of unknown function, DUF642)
Chr3_-_565801 0.76 AT3G02640.1
AT3G02640
transmembrane protein
Chr2_+_18425111 0.76 AT2G44670.1
AT2G44670
senescence-associated family protein (DUF581)
Chr2_-_8851035 0.76 AT2G20562.1
AT2G20562
taximin
Chr5_+_1672070 0.76 AT5G05600.1
AT5G05600.2
AT5G05600
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_+_16598958 0.76 AT4G34810.1
AT4G34810
SAUR-like auxin-responsive protein family
Chr5_-_23700226 0.76 AT5G58650.1
PSY1
plant peptide containing sulfated tyrosine 1
Chr1_+_29373803 0.76 AT1G78090.1
AT1G78090.2
TPPB
trehalose-6-phosphate phosphatase
Chr3_-_4079627 0.75 AT3G12830.1
AT3G12830
SAUR-like auxin-responsive protein family
Chr4_-_16740601 0.75 AT4G35180.2
AT4G35180.1
LHT7
LYS/HIS transporter 7
Chr4_-_14439723 0.75 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
Chr5_+_25097944 0.74 AT5G62520.1
AT5G62520.2
SRO5
similar to RCD one 5
Chr5_+_24248920 0.74 AT5G60220.1
TET4
tetraspanin4
Chr1_-_29203418 0.74 AT1G77690.1
LAX3
like AUX1 3
Chr1_-_4975705 0.74 AT1G14540.1
PER4
Peroxidase superfamily protein
Chr4_+_10498748 0.74 AT4G19200.1
AT4G19200
proline-rich family protein
Chr2_-_10439469 0.74 AT2G24570.1
WRKY17
WRKY DNA-binding protein 17
Chr2_+_12004658 0.74 AT2G28160.1
AT2G28160.2
FRU
FER-like regulator of iron uptake
Chr3_+_7940914 0.74 AT3G22415.1
AT3G22415
hypothetical protein
Chr5_+_3476820 0.73 AT5G10990.1
AT5G10990
SAUR-like auxin-responsive protein family
Chr4_-_6435396 0.73 AT4G10380.1
NIP5%3B1
NOD26-like intrinsic protein 5;1
Chr1_+_25053673 0.73 AT1G67100.1
LBD40
LOB domain-containing protein 40
Chr2_-_19512728 0.73 AT2G47560.1
AT2G47560
RING/U-box superfamily protein
Chr2_-_108803 0.73 AT2G01180.7
AT2G01180.2
AT2G01180.5
AT2G01180.1
AT2G01180.8
AT2G01180.4
AT2G01180.3
PAP1
phosphatidic acid phosphatase 1
Chr5_+_1835047 0.73 AT5G06090.1
GPAT7
glycerol-3-phosphate acyltransferase 7
Chr4_+_460395 0.73 AT4G01060.3
AT4G01060.2
AT4G01060.1
CPL3
CAPRICE-like MYB3
Chr3_-_22811024 0.73 AT3G61640.1
AGP20
arabinogalactan protein 20
Chr3_+_3595694 0.72 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
Chr5_+_20644525 0.72 AT5G50760.1
AT5G50760
SAUR-like auxin-responsive protein family
Chr4_-_176870 0.72 AT4G00400.1
GPAT8
glycerol-3-phosphate acyltransferase 8
Chr3_-_7286442 0.72 AT3G20830.1
UCNL
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr3_-_11138010 0.72 AT3G29170.1
AT3G29170
transmembrane protein (DUF872)
Chr2_+_10344338 0.72 AT2G24310.1
AT2G24310
TPRXL
Chr3_+_17465510 0.71 AT3G47400.1
AT3G47400
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_+_28490443 0.71 AT1G75880.2
AT1G75880.1
AT1G75880
SGNH hydrolase-type esterase superfamily protein
Chr5_+_22594617 0.70 AT5G55830.1
AT5G55830
Concanavalin A-like lectin protein kinase family protein
Chr3_-_19060036 0.70 AT3G51340.1
AT3G51340.3
AT3G51340.4
AT3G51340.2
AT3G51340
Eukaryotic aspartyl protease family protein
Chr5_+_18421704 0.70 AT5G45469.1
AT5G45469
transmembrane protein
Chr5_+_309374 0.70 AT5G01810.1
AT5G01810.2
AT5G01810.3
CIPK15
CBL-interacting protein kinase 15
Chr1_+_27659673 0.70 AT1G73590.1
PIN1
Auxin efflux carrier family protein
Chr1_+_95935 0.70 AT1G01225.1
AT1G01225
NC domain-containing protein-like protein
Chr3_+_21059785 0.70 AT3G56880.1
AT3G56880
VQ motif-containing protein
Chr5_+_16423919 0.70 AT5G41010.1
NRPB12
DNA directed RNA polymerase, 7 kDa subunit
Chr5_+_22460550 0.70 AT5G55410.2
AT5G55410.1
AT5G55410
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_19508929 0.70 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_+_23192146 0.69 AT1G62640.2
AT1G62640.1
KAS III
3-ketoacyl-acyl carrier protein synthase III
Chr5_+_18537239 0.69 AT5G45700.1
AT5G45700
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_26421610 0.69 AT5G66070.1
AT5G66070.3
AT5G66070.4
AT5G66070.2
AT5G66070.5
AT5G66070
RING/U-box superfamily protein
Chr1_+_24489758 0.69 AT1G65840.1
PAO4
polyamine oxidase 4
Chr2_+_13193954 0.69 AT2G31010.2
AT2G31010.1
AT2G31010
Protein kinase superfamily protein
Chr3_-_9471039 0.69 AT3G25882.1
NIMIN-2
NIM1-interacting 2
Chr5_+_16768935 0.69 AT5G41900.1
AT5G41900
alpha/beta-Hydrolases superfamily protein
Chr3_-_21499676 0.69 AT3G58060.2
AT3G58060
Cation efflux family protein
Chr1_-_22935458 0.69 AT1G62045.1
AT1G62045
ankyrin repeat protein
Chr4_-_1445220 0.69 AT4G03292.1
AT4G03292
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr2_+_10662190 0.69 AT2G25060.1
ENODL14
early nodulin-like protein 14
Chr2_+_11563933 0.69 AT2G27080.2
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_-_5540002 0.68 AT1G16170.1
AT1G16170
ephrin-A3 protein
Chr5_-_8277406 0.68 AT5G24313.1
AT5G24313
transmembrane protein
Chr5_+_8323895 0.68 AT5G24380.1
YSL2
YELLOW STRIPE like 2
Chr3_-_2607573 0.68 AT3G08580.1
AAC1
ADP/ATP carrier 1
Chr3_-_2607895 0.68 AT3G08580.2
AAC1
ADP/ATP carrier 1
Chr1_-_105330 0.68 AT1G01250.1
AT1G01250
Integrase-type DNA-binding superfamily protein
Chr4_-_13910995 0.68 AT4G27950.1
CRF4
cytokinin response factor 4
Chr2_+_18626188 0.68 AT2G45180.1
AT2G45180
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_28377377 0.68 AT1G75580.1
AT1G75580
SAUR-like auxin-responsive protein family
Chr3_-_19497650 0.68 AT3G52561.1
AT3G52561
hypothetical protein
Chr3_-_11137604 0.67 AT3G29170.2
AT3G29170
transmembrane protein (DUF872)
Chr2_-_17562947 0.67 AT2G42110.1
AT2G42110
hypothetical protein
Chr4_+_1158783 0.67 AT4G02655.2
AT4G02655.1
AT4G02655
transmembrane protein
Chr4_+_15401640 0.67 AT4G31840.1
ENODL15
early nodulin-like protein 15

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G58850

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.4 1.2 GO:0071258 cellular response to gravity(GO:0071258)
0.4 2.3 GO:0006567 threonine catabolic process(GO:0006567)
0.3 1.0 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.3 1.1 GO:0010971 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.3 1.1 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 0.7 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 1.2 GO:0050810 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.2 0.7 GO:0034626 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.2 0.7 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 0.8 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.2 0.6 GO:0046203 spermidine catabolic process(GO:0046203)
0.2 1.8 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.2 0.6 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.2 2.1 GO:0000304 response to singlet oxygen(GO:0000304)
0.2 0.2 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) establishment of tissue polarity(GO:0007164) tissue morphogenesis(GO:0048729)
0.2 0.9 GO:0060631 regulation of meiosis I(GO:0060631)
0.2 1.3 GO:0009745 sucrose mediated signaling(GO:0009745)
0.2 1.1 GO:0048533 sporocyte differentiation(GO:0048533)
0.2 1.1 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.2 0.9 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.2 0.5 GO:0080145 cysteine homeostasis(GO:0080145)
0.2 0.8 GO:0010338 leaf formation(GO:0010338)
0.2 3.1 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.2 0.8 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 0.3 GO:0019401 alditol biosynthetic process(GO:0019401)
0.2 0.6 GO:0048462 carpel formation(GO:0048462)
0.1 1.9 GO:0071451 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.1 0.7 GO:0060919 auxin influx(GO:0060919)
0.1 2.0 GO:0015865 purine nucleotide transport(GO:0015865)
0.1 0.4 GO:0017145 stem cell division(GO:0017145)
0.1 0.4 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.1 0.4 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.1 1.3 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.4 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 1.3 GO:0010315 auxin efflux(GO:0010315)
0.1 0.4 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.8 GO:1904481 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.4 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.1 1.7 GO:0048766 root hair initiation(GO:0048766)
0.1 2.0 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.3 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.6 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.4 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.7 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 0.4 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.2 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.1 0.8 GO:0010155 regulation of proton transport(GO:0010155)
0.1 0.4 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.1 1.0 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 0.7 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.1 0.6 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 1.5 GO:0010274 hydrotropism(GO:0010274)
0.1 1.5 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.1 1.1 GO:0030026 cellular manganese ion homeostasis(GO:0030026)
0.1 0.4 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.3 GO:0043471 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.1 2.4 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.1 0.5 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.1 0.3 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 0.3 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 0.3 GO:0010185 regulation of cellular defense response(GO:0010185)
0.1 0.5 GO:0019323 pentose catabolic process(GO:0019323)
0.1 0.3 GO:0042908 xenobiotic transport(GO:0042908)
0.1 0.5 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.1 0.6 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 0.7 GO:0080187 floral organ senescence(GO:0080187)
0.1 0.5 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 0.4 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.1 0.2 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.4 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.4 GO:0015739 sialic acid transport(GO:0015739)
0.1 0.5 GO:0046713 borate transport(GO:0046713)
0.1 0.4 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.1 3.3 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.1 0.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.8 GO:0080144 amino acid homeostasis(GO:0080144)
0.1 2.7 GO:0042335 cuticle development(GO:0042335)
0.1 1.6 GO:0006949 syncytium formation(GO:0006949)
0.1 0.3 GO:0002100 tRNA wobble adenosine to inosine editing(GO:0002100)
0.1 0.3 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 0.3 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 1.8 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.2 GO:0010446 response to alkaline pH(GO:0010446)
0.1 0.2 GO:0018279 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 0.6 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 0.6 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 0.4 GO:0080117 secondary growth(GO:0080117)
0.1 1.8 GO:0006826 iron ion transport(GO:0006826)
0.1 0.4 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.1 0.6 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 0.6 GO:2000014 regulation of endosperm development(GO:2000014)
0.1 0.5 GO:0009446 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.1 0.3 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.3 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.9 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.5 GO:0016572 histone phosphorylation(GO:0016572)
0.1 0.2 GO:0030100 regulation of endocytosis(GO:0030100)
0.1 0.4 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.4 GO:2001006 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.1 1.0 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.4 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.3 GO:0048205 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.7 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.2 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 0.3 GO:0006677 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.1 0.2 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.5 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.1 0.5 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.3 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.2 GO:1990110 callus formation(GO:1990110)
0.1 0.1 GO:0010055 atrichoblast differentiation(GO:0010055)
0.1 2.9 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.7 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 0.3 GO:0060321 acceptance of pollen(GO:0060321)
0.1 3.0 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.1 1.8 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 0.3 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.5 GO:0042723 thiamine metabolic process(GO:0006772) thiamine-containing compound metabolic process(GO:0042723)
0.1 1.6 GO:0050826 response to freezing(GO:0050826)
0.1 0.4 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.1 0.6 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.6 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 0.1 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.9 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.1 0.6 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.1 0.9 GO:0006465 signal peptide processing(GO:0006465)
0.1 0.2 GO:0009866 induced systemic resistance, ethylene mediated signaling pathway(GO:0009866)
0.1 0.4 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 0.7 GO:0002757 pattern recognition receptor signaling pathway(GO:0002221) immune response-activating signal transduction(GO:0002757) innate immune response-activating signal transduction(GO:0002758)
0.1 1.0 GO:0010942 positive regulation of cell death(GO:0010942)
0.1 1.6 GO:0006012 galactose metabolic process(GO:0006012)
0.1 0.2 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.1 1.2 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.4 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.2 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.1 0.2 GO:0090603 sieve element differentiation(GO:0090603)
0.1 0.2 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.1 1.8 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 0.2 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.3 GO:0010455 positive regulation of cell fate commitment(GO:0010455)
0.1 0.7 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.2 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 0.2 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.1 0.3 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.1 1.3 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.1 0.8 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.2 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 0.3 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.9 GO:0071668 cellulose microfibril organization(GO:0010215) cell wall assembly(GO:0070726) plant-type cell wall assembly(GO:0071668)
0.1 0.3 GO:0006216 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.1 0.3 GO:0048830 adventitious root development(GO:0048830)
0.1 0.6 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.1 0.5 GO:0016925 protein sumoylation(GO:0016925)
0.1 2.0 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 0.2 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.5 GO:0030307 positive regulation of cell growth(GO:0030307)
0.1 0.1 GO:0018871 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871)
0.1 0.3 GO:0071731 response to nitric oxide(GO:0071731)
0.1 0.1 GO:0090547 response to humidity(GO:0009270) response to low humidity(GO:0090547)
0.0 0.1 GO:0051352 negative regulation of protein ubiquitination(GO:0031397) negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of protein modification by small protein conjugation or removal(GO:1903321) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.0 0.6 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839) negative regulation of nuclear division(GO:0051784)
0.0 0.3 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 0.5 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.3 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.0 0.3 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.0 0.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.2 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 1.0 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.8 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.8 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 1.0 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.5 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.0 0.3 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.2 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.2 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.0 0.3 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.2 GO:0070199 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.0 0.4 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.2 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.0 0.3 GO:0022412 cellular process involved in reproduction in multicellular organism(GO:0022412)
0.0 1.2 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.2 GO:1901271 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.0 0.9 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 0.3 GO:0010358 leaf shaping(GO:0010358)
0.0 0.3 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 0.7 GO:0015743 malate transport(GO:0015743)
0.0 1.4 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.5 GO:0080060 integument development(GO:0080060)
0.0 0.3 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.0 0.3 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.9 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.6 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.0 0.4 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.6 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.4 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.0 1.6 GO:0009846 pollen germination(GO:0009846)
0.0 0.5 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.1 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.0 0.2 GO:0045995 regulation of embryonic development(GO:0045995)
0.0 0.3 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.7 GO:0019915 lipid storage(GO:0019915)
0.0 0.4 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.0 0.6 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.2 GO:0060359 response to ammonium ion(GO:0060359)
0.0 0.8 GO:0009693 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.1 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.0 1.2 GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032434) regulation of proteasomal protein catabolic process(GO:0061136)
0.0 0.4 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.0 0.2 GO:0009061 anaerobic respiration(GO:0009061)
0.0 0.3 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.4 GO:0000266 mitochondrial fission(GO:0000266)
0.0 0.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 0.1 GO:0034963 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.0 0.4 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 3.0 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.0 0.9 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.3 GO:0009306 protein secretion(GO:0009306)
0.0 0.4 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 0.2 GO:0009690 cytokinin metabolic process(GO:0009690)
0.0 0.5 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 0.1 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.0 0.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 0.3 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.2 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.2 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 0.1 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.0 1.7 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 0.3 GO:0010152 pollen maturation(GO:0010152)
0.0 0.3 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.1 GO:0090354 regulation of auxin metabolic process(GO:0090354)
0.0 0.2 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.5 GO:0006378 mRNA polyadenylation(GO:0006378)
0.0 0.3 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.1 GO:0016139 glycoside catabolic process(GO:0016139)
0.0 0.0 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.4 GO:0080154 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.0 0.2 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.3 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249) cellular response to reactive nitrogen species(GO:1902170)
0.0 0.3 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.4 GO:0009900 dehiscence(GO:0009900)
0.0 0.3 GO:0080086 stamen filament development(GO:0080086)
0.0 0.5 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.3 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 1.8 GO:0042545 cell wall modification(GO:0042545)
0.0 0.3 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.1 GO:0048655 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655) anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.0 0.6 GO:0032509 endosome transport via multivesicular body sorting pathway(GO:0032509)
0.0 0.1 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 0.2 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.4 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.2 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.3 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 0.3 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.5 GO:0071462 cellular response to water deprivation(GO:0042631) cellular response to water stimulus(GO:0071462)
0.0 0.1 GO:0046466 membrane lipid catabolic process(GO:0046466)
0.0 0.4 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 0.1 GO:0032102 negative regulation of response to biotic stimulus(GO:0002832) negative regulation of response to external stimulus(GO:0032102)
0.0 0.7 GO:0051156 glucose 6-phosphate metabolic process(GO:0051156)
0.0 0.4 GO:0009685 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.0 0.3 GO:0090333 regulation of stomatal closure(GO:0090333)
0.0 0.3 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.3 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 0.1 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.2 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.1 GO:0006491 N-glycan processing(GO:0006491)
0.0 0.2 GO:0071428 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.0 0.5 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.5 GO:0010027 plastid membrane organization(GO:0009668) thylakoid membrane organization(GO:0010027)
0.0 0.1 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 0.4 GO:0009955 adaxial/abaxial pattern specification(GO:0009955)
0.0 0.1 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.0 0.2 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.1 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.0 1.3 GO:0006486 protein glycosylation(GO:0006486) glycoprotein biosynthetic process(GO:0009101) macromolecule glycosylation(GO:0043413)
0.0 0.6 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.1 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.0 0.1 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.0 0.3 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 0.3 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.0 0.2 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.0 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.3 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.2 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.2 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 0.2 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.2 0.6 GO:0097196 Shu complex(GO:0097196)
0.2 0.6 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 0.5 GO:0016328 lateral plasma membrane(GO:0016328)
0.2 0.5 GO:0031080 nuclear pore outer ring(GO:0031080)
0.2 0.6 GO:0042788 polysomal ribosome(GO:0042788)
0.1 0.4 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.1 1.8 GO:0045298 tubulin complex(GO:0045298)
0.1 0.5 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.1 0.5 GO:0032133 chromosome passenger complex(GO:0032133)
0.1 0.7 GO:0090395 plant cell papilla(GO:0090395)
0.1 0.3 GO:0035371 microtubule plus-end(GO:0035371)
0.1 26.8 GO:0031225 anchored component of membrane(GO:0031225)
0.1 0.4 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.1 0.5 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 1.0 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.1 2.0 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 0.2 GO:0070847 core mediator complex(GO:0070847)
0.1 0.7 GO:0042555 MCM complex(GO:0042555)
0.1 0.7 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.1 0.3 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 0.7 GO:0031209 SCAR complex(GO:0031209)
0.1 0.5 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.1 0.3 GO:0005719 nuclear euchromatin(GO:0005719)
0.1 2.6 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 0.3 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 0.3 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.1 0.6 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.4 GO:0089701 U2AF(GO:0089701)
0.0 0.2 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.5 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.6 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.4 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554) lumenal side of membrane(GO:0098576)
0.0 0.2 GO:0098852 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.1 GO:0031501 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0 0.6 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.8 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.7 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.0 0.4 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 1.9 GO:0031227 intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.0 0.1 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.0 0.2 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.7 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.4 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.1 GO:0010330 cellulose synthase complex(GO:0010330)
0.0 0.2 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.4 GO:0000124 SAGA complex(GO:0000124)
0.0 0.4 GO:0031012 extracellular matrix(GO:0031012)
0.0 2.6 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 1.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.3 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.3 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.4 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 2.7 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.2 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 0.1 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.7 GO:0005811 lipid particle(GO:0005811)
0.0 2.3 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.2 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.4 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.4 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 0.3 GO:0009986 cell surface(GO:0009986)
0.0 0.9 GO:0099503 secretory vesicle(GO:0099503)
0.0 1.3 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.2 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 2.9 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 0.3 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.5 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.2 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.2 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.8 GO:0031301 integral component of organelle membrane(GO:0031301)
0.0 36.1 GO:0005576 extracellular region(GO:0005576)
0.0 0.0 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 2.2 GO:0005740 mitochondrial envelope(GO:0005740)
0.0 1.6 GO:0022626 cytosolic ribosome(GO:0022626)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.3 GO:0008732 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.4 2.6 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.4 2.9 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.3 1.0 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.3 2.2 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.3 1.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.3 0.8 GO:0008936 nicotinamidase activity(GO:0008936)
0.3 0.8 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.2 1.0 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.2 2.6 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.2 2.3 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.2 0.7 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.2 0.6 GO:0050502 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.2 1.9 GO:0009922 fatty acid elongase activity(GO:0009922)
0.2 1.0 GO:0003680 AT DNA binding(GO:0003680)
0.2 0.6 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.2 3.8 GO:0005199 structural constituent of cell wall(GO:0005199)
0.2 0.5 GO:0004788 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.2 0.7 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.2 0.7 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.2 0.5 GO:0044540 L-cystine L-cysteine-lyase (deaminating)(GO:0044540)
0.2 1.0 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 0.7 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.2 0.5 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.2 0.5 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.2 1.4 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 1.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.2 1.1 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.4 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.3 GO:0010334 sesquiterpene synthase activity(GO:0010334)
0.1 2.5 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.7 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.1 0.9 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.8 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.4 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.1 0.5 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 0.4 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.1 1.1 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.1 1.0 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.8 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 3.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.9 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 0.6 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 1.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 1.6 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.1 0.5 GO:0035174 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.1 1.2 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.1 0.8 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 0.7 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.1 0.6 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 1.1 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.1 0.6 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.3 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.6 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.1 0.8 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.1 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.1 0.5 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.4 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 0.9 GO:0004340 glucokinase activity(GO:0004340)
0.1 0.5 GO:0035197 siRNA binding(GO:0035197)
0.1 1.4 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.3 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 0.4 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.2 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.1 0.5 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.1 1.1 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.3 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.1 0.4 GO:0015181 arginine transmembrane transporter activity(GO:0015181) L-lysine transmembrane transporter activity(GO:0015189)
0.1 0.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 2.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.6 GO:0016004 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.1 1.7 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 0.3 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 0.3 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 1.0 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 1.8 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.5 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.1 0.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.3 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 0.4 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 0.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 0.3 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.2 GO:0019789 SUMO transferase activity(GO:0019789)
0.1 0.8 GO:0033613 activating transcription factor binding(GO:0033613)
0.1 0.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.6 GO:0004383 peptide receptor activity(GO:0001653) guanylate cyclase activity(GO:0004383)
0.1 0.5 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 0.3 GO:0004348 glucosylceramidase activity(GO:0004348)
0.1 0.3 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.1 0.3 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 0.5 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.1 0.7 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.7 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 0.3 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.1 3.0 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1 0.4 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.1 0.6 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.1 0.8 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.7 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 0.4 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.2 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.2 GO:0008309 double-stranded DNA exodeoxyribonuclease activity(GO:0008309)
0.1 0.7 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 0.2 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.4 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 0.2 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.1 0.3 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 0.2 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.1 0.6 GO:0016160 amylase activity(GO:0016160)
0.1 0.6 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.4 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 0.3 GO:0004126 cytidine deaminase activity(GO:0004126)
0.1 0.3 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 2.8 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.1 0.5 GO:0009378 four-way junction helicase activity(GO:0009378)
0.1 0.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.3 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 0.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.3 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.6 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.3 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.2 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215)
0.1 0.1 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 1.4 GO:0008810 cellulase activity(GO:0008810)
0.0 1.2 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.3 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.0 0.8 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.9 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.2 GO:0004352 glutamate dehydrogenase (NAD+) activity(GO:0004352)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.1 GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571)
0.0 0.1 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.0 0.5 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.6 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.2 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.0 2.8 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 5.0 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.8 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.2 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.0 0.7 GO:0016157 sucrose synthase activity(GO:0016157)
0.0 0.2 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.0 0.3 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.7 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 1.7 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.3 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.5 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.5 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.4 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.1 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.0 0.3 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.6 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.4 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.6 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.1 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.1 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 0.4 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.4 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.4 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 1.0 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.4 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 2.3 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.2 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.6 GO:0008375 acetylglucosaminyltransferase activity(GO:0008375)
0.0 0.6 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0 0.2 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.4 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.1 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.0 0.2 GO:0010011 auxin binding(GO:0010011)
0.0 0.4 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.3 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.2 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.4 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 1.8 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.1 GO:0015665 alcohol transmembrane transporter activity(GO:0015665) organic hydroxy compound transmembrane transporter activity(GO:1901618)
0.0 0.3 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.3 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.9 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 3.6 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.7 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.4 GO:0008097 5S rRNA binding(GO:0008097)
0.0 2.1 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.3 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.1 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.0 0.3 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.9 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.5 GO:0030599 pectinesterase activity(GO:0030599)
0.0 1.1 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.1 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.0 0.4 GO:0070628 proteasome binding(GO:0070628)
0.0 0.1 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 0.2 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.0 0.2 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.0 0.4 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 1.0 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.1 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.0 0.5 GO:0015293 symporter activity(GO:0015293)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.3 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 2.2 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.1 GO:0070401 NADP+ binding(GO:0070401)
0.0 0.5 GO:0004721 phosphoprotein phosphatase activity(GO:0004721)
0.0 0.5 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.0 1.4 GO:0016298 lipase activity(GO:0016298)
0.0 0.0 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.0 0.2 GO:0050136 ferric-chelate reductase activity(GO:0000293) NADH dehydrogenase (ubiquinone) activity(GO:0008137) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.7 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.2 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.1 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.1 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.2 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.6 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.1 GO:0030623 U5 snRNA binding(GO:0030623)
0.0 0.1 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.6 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.1 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.7 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.1 GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity(GO:0008441)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.2 0.5 PID PI3KCI PATHWAY Class I PI3K signaling events
0.1 0.7 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.5 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.4 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.3 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.0 0.2 PID CMYB PATHWAY C-MYB transcription factor network
0.0 0.2 PID RAC1 PATHWAY RAC1 signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.2 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.2 0.6 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.1 0.4 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 0.5 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.1 0.4 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.7 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.3 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 1.2 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.3 REACTOME G ALPHA1213 SIGNALLING EVENTS Genes involved in G alpha (12/13) signalling events
0.0 0.2 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.2 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.0 0.1 REACTOME G1 PHASE Genes involved in G1 Phase