ISMARA results: AT5G54930

Project

GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G54930

Z-value: 0.11

Transcription factors associated with AT5G54930

Gene Symbol	Gene ID	Gene Info
AT5G54930 TAIR	AT5G54930	AT hook motif-containing protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
AT5G54930	arTal_v1_Chr5_-_22307561_22307569	0.73	3.0e-03	Click!

Activity profile of AT5G54930 motif

Sorted Z-values of AT5G54930 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr1_-_28302728_28302728 Show fit	0.22	AT1G75410.3 AT1G75410.1	BLH3 TAIR Show fit	BEL1-like homeodomain 3
arTal_v1_Chr1_-_28302571_28302571 Show fit	0.19	AT1G75410.2	BLH3 TAIR Show fit	BEL1-like homeodomain 3
arTal_v1_Chr2_-_17060652_17060652 Show fit	0.06	AT2G40890.1	CYP98A3 TAIR Show fit	cytochrome P450, family 98, subfamily A, polypeptide 3

Showing 1 to 3 of 3 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G54930

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0009805	coumarin biosynthetic process(GO:0009805)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0046409	p-coumarate 3-hydroxylase activity(GO:0046409)

Showing 1 to 1 of 1 entries