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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G54230

Z-value: 1.07

Transcription factors associated with AT5G54230

Gene Symbol Gene ID Gene Info
AT5G54230
AT5G54230 myb domain protein 49

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB49arTal_v1_Chr5_-_22018061_22018061-0.283.4e-01Click!

Activity profile of AT5G54230 motif

Sorted Z-values of AT5G54230 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_+_19434758 1.19 AT5G47990.1
CYP705A5
cytochrome P450, family 705, subfamily A, polypeptide 5
Chr3_-_1758807 1.13 AT3G05890.1
RCI2B
Low temperature and salt responsive protein family
Chr5_+_1119937 1.11 AT5G04120.1
AT5G04120
Phosphoglycerate mutase family protein
Chr5_-_19040456 1.09 AT5G46900.1
AT5G46900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_7434199 1.06 AT4G12545.1
AT4G12545
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_993039 1.05 AT4G02270.1
RHS13
root hair specific 13
Chr1_+_23331563 1.05 AT1G62980.1
EXPA18
expansin A18
Chr3_-_8007836 1.04 AT3G22600.1
AT3G22600
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_4370692 1.03 AT5G13580.1
ABCG6
ABC-2 type transporter family protein
Chr5_-_3172701 0.97 AT5G10130.1
AT5G10130
Pollen Ole e 1 allergen and extensin family protein
Chr1_+_920950 0.96 AT1G03700.1
AT1G03700
Uncharacterized protein family (UPF0497)
Chr3_+_8008534 0.96 AT3G22620.1
AT3G22620
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_15036556 0.95 AT2G35770.1
scpl28
serine carboxypeptidase-like 28
Chr4_-_9680389 0.94 AT4G17280.1
AT4G17280
Auxin-responsive family protein
Chr1_+_29130375 0.93 AT1G77520.1
AT1G77520
O-methyltransferase family protein
Chr3_+_16770888 0.91 AT3G45680.1
AT3G45680
Major facilitator superfamily protein
Chr5_-_4481950 0.91 AT5G13900.1
AT5G13900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_11012499 0.88 AT2G25810.1
TIP4%3B1
tonoplast intrinsic protein 4;1
Chr2_+_9592956 0.86 AT2G22590.1
AT2G22590
UDP-Glycosyltransferase superfamily protein
Chr1_-_12617032 0.86 AT1G34510.1
AT1G34510
Peroxidase superfamily protein
Chr1_-_10164452 0.85 AT1G29090.1
AT1G29090
Cysteine proteinases superfamily protein
Chr5_-_2365605 0.83 AT5G07475.1
AT5G07475
Cupredoxin superfamily protein
Chr5_-_7805968 0.81 AT5G23190.1
CYP86B1
cytochrome P450, family 86, subfamily B, polypeptide 1
Chr1_-_6241510 0.81 AT1G18140.1
LAC1
laccase 1
Chr2_-_10711281 0.79 AT2G25160.2
AT2G25160.1
CYP82F1
cytochrome P450, family 82, subfamily F, polypeptide 1
Chr1_-_6558115 0.79 AT1G18980.1
AT1G18980
RmlC-like cupins superfamily protein
Chr4_+_1569937 0.79 AT4G03540.1
AT4G03540
Uncharacterized protein family (UPF0497)
Chr3_-_16448844 0.78 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr4_+_14762819 0.78 AT4G30170.1
AT4G30170
Peroxidase family protein
Chr4_+_2449434 0.78 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr5_+_4488476 0.78 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
Chr3_+_23182722 0.77 AT3G62680.1
PRP3
proline-rich protein 3
Chr4_-_17267472 0.75 AT4G36610.1
AT4G36610
alpha/beta-Hydrolases superfamily protein
Chr1_+_4604688 0.75 AT1G13420.1
ST4B
sulfotransferase 4B
Chr5_+_16431304 0.75 AT5G41040.1
AT5G41040.2
RWP1
HXXXD-type acyl-transferase family protein
Chr1_+_27188036 0.74 AT1G72230.1
AT1G72230
Cupredoxin superfamily protein
Chr5_+_1835047 0.74 AT5G06090.1
GPAT7
glycerol-3-phosphate acyltransferase 7
Chr3_-_10704010 0.72 AT3G28550.1
AT3G28550.2
AT3G28550
Proline-rich extensin-like family protein
Chr3_+_18704764 0.72 AT3G50400.1
AT3G50400
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_12889931 0.71 AT2G30210.1
LAC3
laccase 3
Chr5_-_15167859 0.71 AT5G38020.2
AT5G38020.1
AT5G38020
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_14958080 0.71 AT4G30670.1
AT4G30670
Putative membrane lipoprotein
Chr4_-_10934225 0.70 AT4G20240.1
AT4G20240.2
CYP71A27
cytochrome P450, family 71, subfamily A, polypeptide 27
Chr5_+_4087689 0.68 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr5_+_2560328 0.68 AT5G07990.1
TT7
Cytochrome P450 superfamily protein
Chr3_+_957112 0.67 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
Chr1_+_28291698 0.67 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
Chr1_+_7911843 0.67 AT1G22410.1
AT1G22410
Class-II DAHP synthetase family protein
Chr3_+_3595694 0.67 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
Chr4_+_18185437 0.67 AT4G39030.1
EDS5
MATE efflux family protein
Chr1_+_17966383 0.66 AT1G48600.1
PMEAMT
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_2958971 0.66 AT5G09520.1
PELPK2
hydroxyproline-rich glycoprotein family protein
Chr1_-_4835089 0.65 AT1G14120.2
AT1G14120.1
AT1G14120.3
AT1G14120
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_-_9338075 0.65 AT3G25655.1
IDL1
inflorescence deficient in abscission (IDA)-like 1
Chr3_+_956862 0.65 AT3G03780.2
MS2
methionine synthase 2
Chr4_-_12886695 0.64 AT4G25100.1
AT4G25100.3
AT4G25100.4
FSD1
Fe superoxide dismutase 1
Chr1_-_19366924 0.64 AT1G52070.2
AT1G52070.1
AT1G52070
Mannose-binding lectin superfamily protein
Chr5_-_24987811 0.64 AT5G62210.1
AT5G62210
Embryo-specific protein 3, (ATS3)
Chr1_+_4342209 0.64 AT1G12740.1
AT1G12740.2
AT1G12740.3
AT1G12740.4
CYP87A2
cytochrome P450, family 87, subfamily A, polypeptide 2
Chr2_-_9049404 0.64 AT2G21100.1
AT2G21100.2
AT2G21100
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_-_13761603 0.63 AT4G27560.1
AT4G27560
UDP-Glycosyltransferase superfamily protein
Chr1_+_17965871 0.63 AT1G48600.2
PMEAMT
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_15445294 0.62 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr1_-_20368511 0.62 AT1G54540.1
AT1G54540
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_-_18390496 0.62 AT1G49700.2
AT1G49700.1
AT1G49700.3
AT1G49700.4
AT1G49700
Plant protein 1589 of unknown function
Chr3_+_23438396 0.62 AT3G63470.1
scpl40
serine carboxypeptidase-like 40
Chr5_-_6547127 0.62 AT5G19410.1
AT5G19410.2
ABCG23
ABC-2 type transporter family protein
Chr5_-_17185032 0.61 AT5G42860.1
AT5G42860
late embryogenesis abundant protein, group 2
Chr5_+_25037191 0.60 AT5G62350.1
AT5G62350
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_18291339 0.59 AT3G49330.2
AT3G49330.1
AT3G49330
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr4_-_11702785 0.59 AT4G22080.1
RHS14
root hair specific 14
Chr2_+_873506 0.59 AT2G02990.1
RNS1
ribonuclease 1
Chr5_-_16667171 0.58 AT5G41670.2
AT5G41670.3
AT5G41670
6-phosphogluconate dehydrogenase family protein
Chr4_-_14545310 0.58 AT4G29700.1
AT4G29700
Alkaline-phosphatase-like family protein
Chr2_-_16499524 0.58 AT2G39530.1
AT2G39530
Uncharacterized protein family (UPF0497)
Chr2_-_18020879 0.58 AT2G43390.1
AT2G43390
hypothetical protein
Chr5_+_22388782 0.57 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr5_+_22388521 0.56 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr5_-_16667390 0.56 AT5G41670.1
AT5G41670.4
AT5G41670
6-phosphogluconate dehydrogenase family protein
Chr4_-_810574 0.56 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
Chr1_-_6735024 0.55 AT1G19450.1
AT1G19450
Major facilitator superfamily protein
Chr1_+_18209194 0.55 AT1G49230.1
AT1G49230
RING/U-box superfamily protein
Chr3_+_9480746 0.55 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
Chr3_-_7656053 0.55 AT3G21720.1
ICL
isocitrate lyase
Chr5_-_2655732 0.55 AT5G08250.1
AT5G08250.2
AT5G08250
Cytochrome P450 superfamily protein
Chr2_+_17251819 0.53 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_8987898 0.53 AT5G25810.1
tny
Integrase-type DNA-binding superfamily protein
Chr3_-_20418910 0.53 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr5_+_25550937 0.52 AT5G63850.1
AAP4
amino acid permease 4
Chr1_-_28453820 0.52 AT1G75780.1
TUB1
tubulin beta-1 chain
Chr3_-_21085245 0.52 AT3G56970.1
bHLH38
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_+_7275657 0.52 AT2G16760.1
AT2G16760
Calcium-dependent phosphotriesterase superfamily protein
Chr1_-_11548016 0.51 AT1G32100.1
PRR1
pinoresinol reductase 1
Chr2_+_18842516 0.51 AT2G45750.1
AT2G45750
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_6980523 0.51 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr1_+_6100964 0.51 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr5_-_4566988 0.51 AT5G14150.1
AT5G14150.2
AT5G14150
Emb:.1 protein, putative (Protein of unknown function, DUF642)
Chr5_-_2359311 0.50 AT5G07450.1
CYCP4%3B3
cyclin p4;3
Chr2_-_10055323 0.50 AT2G23630.1
AT2G23630.2
sks16
SKU5 similar 16
Chr5_-_779424 0.50 AT5G03260.1
LAC11
laccase 11
Chr2_-_19685997 0.50 AT2G48130.3
AT2G48130.2
AT2G48130.6
AT2G48130.1
AT2G48130.5
AT2G48130.4
AT2G48130
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_16596640 0.50 AT4G34800.1
AT4G34800
SAUR-like auxin-responsive protein family
Chr4_-_12886902 0.50 AT4G25100.2
AT4G25100.5
FSD1
Fe superoxide dismutase 1
Chr4_-_13765064 0.49 AT4G27570.1
AT4G27570
UDP-Glycosyltransferase superfamily protein
Chr4_-_11032677 0.49 AT4G20460.1
AT4G20470.1
AT4G20460
AT4G20470
NAD(P)-binding Rossmann-fold superfamily protein
transmembrane protein
Chr5_-_19385869 0.49 AT5G47870.1
RAD52-2
cobalt ion-binding protein
Chr5_-_1467161 0.49 AT5G04970.1
AT5G04970
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_9368852 0.49 AT4G16640.1
AT4G16640
Matrixin family protein
Chr2_-_14295353 0.48 AT2G33790.1
AGP30
arabinogalactan protein 30
Chr1_-_6579314 0.48 AT1G19050.1
ARR7
response regulator 7
Chr2_+_10177776 0.48 AT2G23910.2
AT2G23910.3
AT2G23910.1
AT2G23910.4
AT2G23910
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_-_14753088 0.48 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
Chr3_+_5571903 0.48 AT3G16410.1
NSP4
nitrile specifier protein 4
Chr1_+_12087196 0.48 AT1G33340.1
AT1G33340
ENTH/ANTH/VHS superfamily protein
Chr4_-_8050157 0.48 AT4G13930.1
SHM4
serine hydroxymethyltransferase 4
Chr1_-_19672021 0.47 AT1G52827.1
CDT1
cadmium tolerance 1
Chr4_-_12883701 0.47 AT4G25090.2
AT4G25090.1
AT4G25090
Riboflavin synthase-like superfamily protein
Chr5_-_25366012 0.47 AT5G63270.1
AT5G63270
RPM1-interacting protein 4 (RIN4) family protein
Chr2_+_17527167 0.47 AT2G41990.1
AT2G41990
late embryogenesis abundant protein
Chr1_+_4069992 0.47 AT1G12040.1
LRX1
leucine-rich repeat/extensin 1
Chr5_+_20427749 0.46 AT5G50175.1
AT5G50175
transmembrane protein
Chr1_+_20462940 0.46 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
Chr5_+_2210562 0.46 AT5G07130.3
AT5G07130.1
LAC13
laccase 13
Chr5_-_14976229 0.46 AT5G37690.2
AT5G37690.1
AT5G37690
SGNH hydrolase-type esterase superfamily protein
Chr4_-_15022445 0.46 AT4G30850.2
AT4G30850.1
HHP2
heptahelical transmembrane protein2
Chr5_+_16624157 0.46 AT5G41570.1
WRKY24
WRKY DNA-binding protein 24
Chr4_-_682601 0.46 AT4G01575.1
AT4G01575
serine protease inhibitor, Kazal-type family protein
Chr5_+_3058907 0.45 AT5G09840.1
AT5G09840
Putative endonuclease or glycosyl hydrolase
Chr3_+_3638178 0.45 AT3G11550.1
CASP2
Uncharacterized protein family (UPF0497)
Chr5_-_17943283 0.45 AT5G44550.1
AT5G44550
Uncharacterized protein family (UPF0497)
Chr4_-_6425678 0.45 AT4G10370.1
AT4G10370
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_4053871 0.45 AT1G12000.1
AT1G12000
Phosphofructokinase family protein
Chr3_+_22340859 0.45 AT3G60450.2
AT3G60450.1
AT3G60450
Phosphoglycerate mutase family protein
Chr2_-_18401339 0.44 AT2G44578.1
AT2G44578
RING/U-box superfamily protein
Chr2_+_14384797 0.44 AT2G34060.1
AT2G34060
Peroxidase superfamily protein
Chr2_-_9357967 0.44 AT2G21970.1
SEP2
stress enhanced protein 2
Chr1_+_21136835 0.44 AT1G56430.1
NAS4
nicotianamine synthase 4
Chr5_+_19116719 0.44 AT5G47060.1
AT5G47060.2
AT5G47060
hypothetical protein (DUF581)
Chr4_-_16207956 0.44 AT4G33790.2
AT4G33790.1
CER4
Jojoba acyl CoA reductase-related male sterility protein
Chr5_+_25040540 0.43 AT5G62360.1
AT5G62360
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_25885261 0.43 AT1G68850.1
AT1G68850
Peroxidase superfamily protein
Chr1_-_1122786 0.43 AT1G04220.1
KCS2
3-ketoacyl-CoA synthase 2
Chr5_+_8035690 0.43 AT5G23840.1
AT5G23840.2
AT5G23840
MD-2-related lipid recognition domain-containing protein
Chr4_-_9844290 0.43 AT4G17680.3
AT4G17680.2
AT4G17680.1
AT4G17680
SBP (S-ribonuclease binding protein) family protein
Chr2_+_12698573 0.43 AT2G29710.1
AT2G29710
UDP-Glycosyltransferase superfamily protein
Chr2_-_18463533 0.43 AT2G44790.1
UCC2
uclacyanin 2
Chr2_+_6313883 0.43 AT2G14750.1
APK
APS kinase
Chr3_-_11448609 0.43 AT3G29630.2
AT3G29630.1
AT3G29630
UDP-Glycosyltransferase superfamily protein
Chr5_+_5202696 0.42 AT5G15940.4
AT5G15940.3
AT5G15940.1
AT5G15940
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_15560755 0.42 AT2G37040.1
PAL1
PHE ammonia lyase 1
Chr2_+_14726800 0.42 AT2G34910.1
AT2G34910
root hair specific protein
Chr1_-_24062804 0.42 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
Chr1_-_7455009 0.41 AT1G21310.1
EXT3
extensin 3
Chr5_+_26910205 0.41 AT5G67430.2
AT5G67430.1
AT5G67430
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr4_-_2517217 0.41 AT4G04940.1
AT4G04940
transducin family protein / WD-40 repeat family protein
Chr5_-_21619281 0.41 AT5G53290.1
CRF3
cytokinin response factor 3
Chr3_-_10044539 0.41 AT3G27200.1
AT3G27200
Cupredoxin superfamily protein
Chr3_+_1080942 0.40 AT3G04120.1
GAPC1
glyceraldehyde-3-phosphate dehydrogenase C subunit 1
Chr4_+_11006815 0.40 AT4G20390.1
AT4G20390
Uncharacterized protein family (UPF0497)
Chr4_-_11896480 0.40 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_5759817 0.40 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr2_-_11759588 0.40 AT2G27510.1
FD3
ferredoxin 3
Chr4_-_2516703 0.40 AT4G04940.2
AT4G04940
transducin family protein / WD-40 repeat family protein
Chr2_+_14003128 0.39 AT2G32990.1
GH9B8
glycosyl hydrolase 9B8
Chr3_+_415389 0.39 AT3G02230.1
RGP1
reversibly glycosylated polypeptide 1
Chr5_+_9295341 0.39 AT5G26731.1
AT5G26731
hypothetical protein
Chr5_-_5741500 0.39 AT5G17420.1
IRX3
Cellulose synthase family protein
Chr2_-_19207608 0.39 AT2G46740.1
GulLO5
D-arabinono-1,4-lactone oxidase family protein
Chr4_-_12624039 0.39 AT4G24410.1
AT4G24410
hypothetical protein
Chr2_-_16198577 0.39 AT2G38750.1
ANNAT4
annexin 4
Chr3_-_5845220 0.39 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_20504901 0.39 AT1G54970.1
PRP1
proline-rich protein 1
Chr5_-_8502224 0.39 AT5G24770.1
AT5G24770.2
VSP2
vegetative storage protein 2
Chr4_+_16904059 0.38 AT4G35630.1
PSAT
phosphoserine aminotransferase
Chr1_+_26315787 0.38 AT1G69870.1
NRT1.7
nitrate transporter 1.7
Chr5_+_6585355 0.38 AT5G19520.1
AT5G19520.2
MSL9
mechanosensitive channel of small conductance-like 9
Chr2_+_13141290 0.38 AT2G30870.1
GSTF10
glutathione S-transferase PHI 10
Chr5_+_7524086 0.38 AT5G22630.1
ADT5
arogenate dehydratase 5
Chr1_-_10905724 0.38 AT1G30750.1
AT1G30750
TPRXL
Chr5_-_9242854 0.38 AT5G26330.1
AT5G26330
Cupredoxin superfamily protein
Chr1_+_2414143 0.38 AT1G07795.1
AT1G07795
forkhead box protein G1
Chr2_-_16198832 0.38 AT2G38750.2
ANNAT4
annexin 4
Chr1_-_21227112 0.38 AT1G56630.1
AT1G56630
alpha/beta-Hydrolases superfamily protein
Chr3_-_19633283 0.38 AT3G52940.2
AT3G52940.1
AT3G52941.1
FK
AT3G52941
Ergosterol biosynthesis ERG4/ERG24 family
Putative membrane lipoprotein
Chr2_+_13987669 0.38 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
Chr5_-_3971452 0.38 AT5G12270.1
AT5G12270
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_3018342 0.38 AT5G09730.1
BXL3
beta-xylosidase 3
Chr5_+_5935038 0.37 AT5G17920.1
AT5G17920.2
ATMS1
Cobalamin-independent synthase family protein
Chr1_-_22067076 0.37 AT1G59940.1
ARR3
response regulator 3
Chr1_-_8486002 0.37 AT1G23980.1
AT1G23980
RING/U-box superfamily protein
Chr5_+_15533713 0.37 AT5G38790.1
AT5G38790
hypothetical protein
Chr4_+_6836106 0.37 AT4G11211.1
AT4G11211
hypothetical protein
Chr2_-_17161293 0.37 AT2G41170.2
AT2G41170.1
AT2G41170.3
AT2G41170
F-box family protein
Chr2_-_15186852 0.37 AT2G36210.1
AT2G36210
SAUR-like auxin-responsive protein family
Chr2_-_16780368 0.37 AT2G40170.1
GEA6
Stress induced protein
Chr3_-_565801 0.37 AT3G02640.1
AT3G02640
transmembrane protein
Chr1_+_20098522 0.36 AT1G53830.1
PME2
pectin methylesterase 2
Chr3_+_7518784 0.36 AT3G21351.1
AT3G21351
transmembrane protein
Chr1_+_26423874 0.36 AT1G70170.1
MMP
matrix metalloproteinase
Chr5_+_5514717 0.36 AT5G16770.3
AT5G16770.2
AT5G16770.1
AT5G16770.4
MYB9
myb domain protein 9

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G54230

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0090547 response to low humidity(GO:0090547)
0.3 1.6 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.3 1.2 GO:0080003 thalianol metabolic process(GO:0080003)
0.2 1.1 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.2 0.7 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 0.9 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 5.0 GO:0010345 suberin biosynthetic process(GO:0010345)
0.2 0.5 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 0.5 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 0.5 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.2 0.3 GO:0010377 guard cell fate commitment(GO:0010377)
0.2 0.6 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.1 0.7 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.5 GO:0006097 glyoxylate cycle(GO:0006097)
0.1 1.1 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.5 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.3 GO:0032414 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.1 0.4 GO:0072351 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.1 0.5 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.1 0.4 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.1 0.3 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.3 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.5 GO:1902767 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 0.9 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.4 GO:0080168 abscisic acid transport(GO:0080168)
0.1 0.3 GO:0042539 hypotonic salinity response(GO:0042539)
0.1 0.6 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.4 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.5 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.5 GO:0006531 aspartate metabolic process(GO:0006531)
0.1 0.4 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.3 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.1 0.3 GO:0070207 protein homotrimerization(GO:0070207)
0.1 0.5 GO:0043090 amino acid import(GO:0043090)
0.1 0.2 GO:0048455 stamen formation(GO:0048455)
0.1 0.4 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 0.3 GO:0071043 nuclear mRNA surveillance of mRNA 3'-end processing(GO:0071031) CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043) nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription(GO:0071049)
0.1 0.3 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.5 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.1 0.1 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.1 0.4 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.7 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.1 0.2 GO:0033530 raffinose metabolic process(GO:0033530)
0.1 0.1 GO:0015786 UDP-glucose transport(GO:0015786)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.1 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.3 GO:0043279 response to caffeine(GO:0031000) response to alkaloid(GO:0043279)
0.1 0.1 GO:0009270 response to humidity(GO:0009270)
0.1 0.5 GO:0006565 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.4 GO:0051775 response to redox state(GO:0051775)
0.1 0.5 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.9 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.3 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.3 GO:0010351 lithium ion transport(GO:0010351)
0.1 0.4 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.1 0.4 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 0.7 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 1.4 GO:0046688 response to copper ion(GO:0046688)
0.1 0.8 GO:0044209 AMP salvage(GO:0044209)
0.1 0.2 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 1.2 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.2 GO:0000730 DNA recombinase assembly(GO:0000730) strand invasion(GO:0042148)
0.1 0.3 GO:0009808 lignin metabolic process(GO:0009808)
0.1 1.0 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 0.5 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.3 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.2 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.1 1.5 GO:0010227 floral organ abscission(GO:0010227)
0.1 0.4 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.2 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.1 0.2 GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737) positive regulation of cyclin-dependent protein kinase activity(GO:1904031)
0.1 0.9 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.1 0.5 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.1 GO:0019499 cyanide metabolic process(GO:0019499)
0.1 0.2 GO:0010055 atrichoblast differentiation(GO:0010055) positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.0 0.5 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.1 GO:0015784 GDP-fucose transport(GO:0015783) GDP-mannose transport(GO:0015784) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.0 0.5 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.6 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.5 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.0 0.2 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 0.2 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.7 GO:0048766 root hair initiation(GO:0048766)
0.0 0.3 GO:0006558 L-phenylalanine metabolic process(GO:0006558) erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process(GO:1902221)
0.0 0.8 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.1 GO:1901998 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891) toxin transport(GO:1901998)
0.0 0.7 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.1 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.0 0.1 GO:0016046 detection of fungus(GO:0016046)
0.0 0.3 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.0 0.1 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.0 0.1 GO:0032950 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.0 0.2 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.0 0.1 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.0 0.1 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.0 0.0 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.0 0.2 GO:0010366 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.0 0.3 GO:0019079 viral genome replication(GO:0019079)
0.0 0.2 GO:0032324 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 0.1 GO:0010061 trichoblast fate specification(GO:0010057) regulation of trichoblast fate specification(GO:0010061) regulation of plant epidermal cell differentiation(GO:1903888)
0.0 0.2 GO:1990428 miRNA transport(GO:1990428)
0.0 1.3 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.6 GO:0015918 sterol transport(GO:0015918)
0.0 0.6 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.2 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.5 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.3 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 2.7 GO:0009699 phenylpropanoid biosynthetic process(GO:0009699)
0.0 0.4 GO:0032147 activation of protein kinase activity(GO:0032147)
0.0 0.4 GO:0051984 positive regulation of chromosome segregation(GO:0051984)
0.0 0.3 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.4 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.3 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.1 GO:1903335 regulation of vacuolar transport(GO:1903335)
0.0 0.2 GO:0010338 leaf formation(GO:0010338) positive regulation of organ growth(GO:0046622)
0.0 0.4 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 0.5 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.0 0.3 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.0 0.4 GO:0009554 megasporogenesis(GO:0009554)
0.0 0.2 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.0 0.1 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.0 0.1 GO:0071258 cellular response to gravity(GO:0071258)
0.0 0.1 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.0 0.1 GO:0099636 cytoplasmic streaming(GO:0099636)
0.0 1.2 GO:0010927 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.1 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.0 0.1 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.1 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618) regulation of DNA-templated transcription in response to stress(GO:0043620)
0.0 0.2 GO:1902025 nitrate import(GO:1902025)
0.0 0.2 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.0 0.1 GO:0045793 positive regulation of cell size(GO:0045793)
0.0 0.1 GO:0009305 protein biotinylation(GO:0009305)
0.0 0.4 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.2 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.0 0.1 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.0 0.1 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.2 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.2 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.1 GO:0055089 fatty acid homeostasis(GO:0055089)
0.0 0.3 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.2 GO:0009099 valine biosynthetic process(GO:0009099)
0.0 0.1 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.0 0.2 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.3 GO:0036065 fucosylation(GO:0036065)
0.0 0.3 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.3 GO:0010555 response to mannitol(GO:0010555)
0.0 0.4 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 2.0 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.1 GO:0010500 transmitting tissue development(GO:0010500) carpel formation(GO:0048462)
0.0 0.1 GO:0018874 benzoate metabolic process(GO:0018874)
0.0 0.1 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.0 0.1 GO:0002215 defense response to nematode(GO:0002215)
0.0 0.1 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.0 0.6 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:1901600 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.0 0.2 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.0 0.1 GO:0071486 cellular response to high light intensity(GO:0071486)
0.0 0.2 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.2 GO:2000068 regulation of defense response to insect(GO:2000068)
0.0 1.0 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.0 GO:0048358 mucilage pectin biosynthetic process(GO:0048358)
0.0 0.2 GO:0009799 specification of symmetry(GO:0009799)
0.0 0.1 GO:0030100 regulation of endocytosis(GO:0030100)
0.0 0.2 GO:0010230 alternative respiration(GO:0010230)
0.0 0.1 GO:0019310 inositol catabolic process(GO:0019310)
0.0 0.2 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000479)
0.0 0.2 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.3 GO:0015770 sucrose transport(GO:0015770)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.1 GO:0051031 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0 0.1 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.0 0.1 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.1 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.1 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.0 1.5 GO:0016125 sterol metabolic process(GO:0016125)
0.0 0.1 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.9 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.1 GO:0016137 glycoside metabolic process(GO:0016137)
0.0 0.2 GO:0009438 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 1.7 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.1 GO:0017145 stem cell division(GO:0017145)
0.0 0.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 0.4 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.1 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.4 GO:0010449 root meristem growth(GO:0010449)
0.0 0.0 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.0 0.2 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.1 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 1.2 GO:0009624 response to nematode(GO:0009624)
0.0 0.2 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.3 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.0 0.2 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 1.7 GO:0080167 response to karrikin(GO:0080167)
0.0 0.1 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192) mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 0.1 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.2 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.3 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.1 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 0.1 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.0 0.2 GO:0080086 stamen filament development(GO:0080086)
0.0 0.2 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.2 GO:0048859 formation of organ boundary(GO:0010160) organ formation(GO:0048645) formation of anatomical boundary(GO:0048859)
0.0 0.2 GO:1902074 response to salt(GO:1902074)
0.0 0.5 GO:0050826 response to freezing(GO:0050826)
0.0 0.2 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.7 GO:0009735 response to cytokinin(GO:0009735)
0.0 0.5 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.0 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.1 GO:0008216 spermidine metabolic process(GO:0008216)
0.0 0.1 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.0 0.4 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 0.1 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 0.1 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.1 GO:0009643 photosynthetic acclimation(GO:0009643)
0.0 1.4 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.1 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.1 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.3 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.1 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.2 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.1 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.0 GO:0042770 signal transduction in response to DNA damage(GO:0042770)
0.0 0.1 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.0 0.2 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.1 GO:0010390 histone monoubiquitination(GO:0010390)
0.0 0.1 GO:0000055 ribosomal large subunit export from nucleus(GO:0000055)
0.0 0.2 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.0 0.0 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.0 0.1 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.3 GO:2000280 regulation of root development(GO:2000280)
0.0 0.2 GO:0010152 pollen maturation(GO:0010152)
0.0 0.2 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.1 GO:0016180 snRNA processing(GO:0016180)
0.0 0.1 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.2 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 0.1 GO:0072337 modified amino acid transport(GO:0072337)
0.0 0.0 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.0 0.4 GO:0010311 lateral root formation(GO:0010311)
0.0 0.3 GO:0042335 cuticle development(GO:0042335)
0.0 0.1 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.2 GO:0042631 cellular response to water deprivation(GO:0042631) cellular response to water stimulus(GO:0071462)
0.0 0.8 GO:0010054 trichoblast differentiation(GO:0010054)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.2 GO:0009813 flavonoid biosynthetic process(GO:0009813)
0.0 0.2 GO:0000470 maturation of LSU-rRNA(GO:0000470)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0009514 glyoxysome(GO:0009514)
0.3 1.0 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.1 0.8 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1 0.4 GO:0016461 unconventional myosin complex(GO:0016461)
0.1 0.4 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 0.3 GO:0043674 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.1 0.4 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.7 GO:0048226 Casparian strip(GO:0048226)
0.1 0.6 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 1.0 GO:0009986 cell surface(GO:0009986)
0.0 0.1 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.0 0.3 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 0.3 GO:0005784 Sec61 translocon complex(GO:0005784)
0.0 0.2 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.6 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 0.5 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.3 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 0.2 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.7 GO:0031012 extracellular matrix(GO:0031012)
0.0 6.0 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.1 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.1 GO:0030689 Noc complex(GO:0030689)
0.0 1.5 GO:0005764 lysosome(GO:0005764)
0.0 0.4 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.1 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.0 0.1 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.0 0.2 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.3 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.3 GO:0045177 apical part of cell(GO:0045177)
0.0 2.5 GO:0031225 anchored component of membrane(GO:0031225)
0.0 3.8 GO:0009505 plant-type cell wall(GO:0009505)
0.0 1.3 GO:0090406 pollen tube(GO:0090406)
0.0 0.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.3 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.0 0.1 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.2 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.4 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.2 GO:0045298 tubulin complex(GO:0045298)
0.0 0.1 GO:0012510 trans-Golgi network transport vesicle membrane(GO:0012510)
0.0 0.1 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.2 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.4 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.1 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 4.4 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 1.7 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.5 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.3 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.4 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.1 GO:0005688 U6 snRNP(GO:0005688)
0.0 0.6 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.1 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.1 GO:0010369 chromocenter(GO:0010369)
0.0 0.1 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.6 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.3 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.5 GO:0005797 Golgi medial cisterna(GO:0005797)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.3 1.7 GO:0042084 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.3 1.1 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.3 0.8 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.3 1.0 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 0.7 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.2 0.6 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.2 1.6 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 0.8 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 0.8 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.2 0.5 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 0.9 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.2 0.5 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.2 0.5 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.2 3.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 0.8 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.2 0.9 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.2 0.9 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.6 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 0.5 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.5 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.5 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.4 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 0.6 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.5 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 0.3 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.1 0.4 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.1 1.1 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.3 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.8 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 0.5 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.3 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.1 0.8 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.6 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 0.4 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.4 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 1.0 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.3 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.1 0.3 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.3 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.1 0.8 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.6 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.1 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.2 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.1 0.4 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.1 0.5 GO:0052655 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.4 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 0.2 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 0.4 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.2 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.6 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.4 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 0.5 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.5 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 0.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.2 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.1 0.4 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.7 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.5 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.1 0.4 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1 0.4 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.3 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.2 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 0.2 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 2.3 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.1 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.1 0.2 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.1 0.2 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.1 0.2 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.1 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 0.3 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 0.4 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.2 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.5 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 0.1 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.0 1.2 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.2 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.0 0.6 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.2 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.4 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 0.5 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.7 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.2 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.0 0.1 GO:0052627 4-aminobenzoate amino acid synthetase activity(GO:0052625) benzoate amino acid synthetase activity(GO:0052626) vanillate amino acid synthetase activity(GO:0052627) 4-hydroxybenzoate amino acid synthetase activity(GO:0052628)
0.0 0.5 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.1 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.0 0.2 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.0 0.6 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.5 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.0 0.8 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 1.2 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.5 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.3 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.4 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 0.4 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 0.3 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.3 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.1 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.7 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.2 GO:0000150 recombinase activity(GO:0000150)
0.0 0.2 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.2 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.2 GO:0004072 aspartate kinase activity(GO:0004072)
0.0 0.2 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.4 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.1 GO:0019789 SUMO transferase activity(GO:0019789)
0.0 0.1 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.0 0.1 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.0 0.3 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.2 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.1 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.0 0.1 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.1 GO:0052736 beta-glucanase activity(GO:0052736)
0.0 0.1 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.0 0.2 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.2 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 1.0 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.2 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.1 GO:0018271 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.0 0.6 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.2 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.2 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.0 0.3 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.1 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.0 0.1 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.0 0.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.2 GO:0008169 C-methyltransferase activity(GO:0008169)
0.0 0.2 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.0 0.1 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.3 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.1 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.0 1.6 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.3 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 2.3 GO:0004601 peroxidase activity(GO:0004601)
0.0 3.0 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.2 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.2 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 0.1 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.0 0.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 1.5 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 5.7 GO:0020037 heme binding(GO:0020037)
0.0 0.5 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.8 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.5 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.1 GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756)
0.0 0.1 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 1.1 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.2 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.6 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.1 GO:0016004 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 1.3 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.5 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.5 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.1 GO:0050113 inositol oxygenase activity(GO:0050113)
0.0 0.5 GO:0005179 hormone activity(GO:0005179)
0.0 0.1 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.5 GO:0010427 abscisic acid binding(GO:0010427) isoprenoid binding(GO:0019840)
0.0 0.2 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.1 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.1 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.0 0.6 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.2 GO:0008235 metalloexopeptidase activity(GO:0008235)
0.0 0.3 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.4 GO:0008810 cellulase activity(GO:0008810)
0.0 0.0 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.0 0.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.2 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.1 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661)
0.0 0.2 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.2 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.3 GO:0016018 drug binding(GO:0008144) cyclosporin A binding(GO:0016018)
0.0 0.2 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.2 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.0 0.0 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.6 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.0 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.0 0.2 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.0 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.4 GO:0016838 carbon-oxygen lyase activity, acting on phosphates(GO:0016838)
0.0 0.1 GO:0018822 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.0 0.1 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.0 0.6 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.2 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.1 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.0 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.4 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.2 GO:0097599 endo-1,4-beta-xylanase activity(GO:0031176) xylanase activity(GO:0097599)
0.0 0.4 GO:0032934 sterol binding(GO:0032934)
0.0 0.1 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.6 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.1 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.1 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.3 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.1 GO:0045431 flavonol synthase activity(GO:0045431)
0.0 0.1 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.1 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.1 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.0 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.0 0.0 GO:0097157 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.0 0.1 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.2 GO:0016157 sucrose synthase activity(GO:0016157)
0.0 0.1 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.1 0.2 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.1 0.4 PID MYC PATHWAY C-MYC pathway
0.1 0.2 PID AURORA A PATHWAY Aurora A signaling
0.1 0.1 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.1 0.7 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.1 0.2 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.1 0.4 PID MET PATHWAY Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met)
0.0 0.2 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.2 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.1 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.0 0.1 PID P73PATHWAY p73 transcription factor network
0.0 0.1 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.2 0.5 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.1 0.5 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.1 0.2 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.1 0.2 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.2 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.2 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
0.0 0.1 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.0 0.2 REACTOME POST TRANSLATIONAL PROTEIN MODIFICATION Genes involved in Post-translational protein modification
0.0 0.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.1 REACTOME BASE EXCISION REPAIR Genes involved in Base Excision Repair
0.0 0.1 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.0 0.0 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.0 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.0 0.2 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.1 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.0 0.1 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination