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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G50670

Z-value: 0.76

Transcription factors associated with AT5G50670

Gene Symbol Gene ID Gene Info
AT5G50670
AT5G50670 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
SPL13BarTal_v1_Chr5_-_20617538_206175380.283.2e-01Click!

Activity profile of AT5G50670 motif

Sorted Z-values of AT5G50670 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_26519242 0.97 AT5G66400.2
RAB18
Dehydrin family protein
Chr5_-_26519447 0.88 AT5G66400.1
RAB18
Dehydrin family protein
Chr1_+_29178705 0.75 AT1G77640.1
AT1G77640
Integrase-type DNA-binding superfamily protein
Chr3_+_8918267 0.66 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
Chr1_-_18430497 0.64 AT1G49780.1
PUB26
plant U-box 26
Chr3_+_8918679 0.63 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
Chr1_+_26654768 0.60 AT1G70700.3
AT1G70700.2
TIFY7
TIFY domain/Divergent CCT motif family protein
Chr1_+_5274271 0.56 AT1G15330.1
AT1G15330
Cystathionine beta-synthase (CBS) protein
Chr1_+_26654529 0.55 AT1G70700.1
TIFY7
TIFY domain/Divergent CCT motif family protein
Chr4_+_15819489 0.52 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr3_-_16479559 0.52 AT3G45060.1
NRT2.6
high affinity nitrate transporter 2.6
Chr1_+_28053030 0.51 AT1G74670.1
GASA6
Gibberellin-regulated family protein
Chr3_+_21059785 0.50 AT3G56880.1
AT3G56880
VQ motif-containing protein
Chr3_-_21293158 0.50 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
Chr3_-_8064649 0.50 AT3G22800.1
AT3G22800
Leucine-rich repeat (LRR) family protein
Chr5_+_733887 0.49 AT5G03120.1
AT5G03120.2
AT5G03120
transmembrane protein
Chr3_+_8309209 0.48 AT3G23250.1
AT3G23250.2
MYB15
myb domain protein 15
Chr1_+_12237547 0.46 AT1G33760.1
AT1G33760
Integrase-type DNA-binding superfamily protein
Chr1_+_5977323 0.44 AT1G17420.1
LOX3
lipoxygenase 3
Chr2_-_12188293 0.43 AT2G28500.1
LBD11
LOB domain-containing protein 11
Chr2_-_17115047 0.42 AT2G41010.1
CAMBP25
calmodulin (CAM)-binding protein of 25 kDa
Chr2_-_108803 0.42 AT2G01180.7
AT2G01180.2
AT2G01180.5
AT2G01180.1
AT2G01180.8
AT2G01180.4
AT2G01180.3
PAP1
phosphatidic acid phosphatase 1
Chr4_-_11623797 0.42 AT4G21903.2
AT4G21903.1
AT4G21903
MATE efflux family protein
Chr2_+_16108235 0.42 AT2G38470.1
WRKY33
WRKY DNA-binding protein 33
Chr1_-_5504535 0.38 AT1G16030.1
Hsp70b
heat shock protein 70B
Chr5_-_1580875 0.38 AT5G05340.1
PRX52
Peroxidase superfamily protein
Chr2_-_12433796 0.38 AT2G28950.1
EXPA6
expansin A6
Chr1_+_12346138 0.38 AT1G33960.2
AT1G33960.1
AIG1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_23469247 0.38 AT1G63260.4
AT1G63260.1
AT1G63260.2
AT1G63260.3
AT1G63260.5
AT1G63260.6
TET10
tetraspanin10
Chr3_-_6350832 0.38 AT3G18490.1
ASPG1
Eukaryotic aspartyl protease family protein
Chr5_-_23248865 0.37 AT5G57380.2
VIN3
Fibronectin type III domain-containing protein
Chr5_+_208866 0.37 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
Chr4_+_5792137 0.37 AT4G09030.1
AGP10
arabinogalactan protein 10
Chr1_+_27190036 0.37 AT1G72240.1
AT1G72240
hypothetical protein
Chr1_+_4899045 0.36 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
Chr2_+_19472573 0.35 AT2G47450.1
CAO
chloroplast signal recognition particle component (CAO)
Chr1_+_3066674 0.35 AT1G09500.1
AT1G09500.2
AT1G09500.3
AT1G09500
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_16933699 0.35 AT1G44830.1
AT1G44830
Integrase-type DNA-binding superfamily protein
Chr3_+_4810888 0.35 AT3G14395.1
AT3G14395
hypothetical protein
Chr5_-_23249504 0.34 AT5G57380.1
VIN3
Fibronectin type III domain-containing protein
Chr1_+_28746833 0.34 AT1G76600.1
AT1G76600
poly polymerase
Chr2_-_9577616 0.34 AT2G22530.1
AT2G22530
Alkaline-phosphatase-like family protein
Chr4_-_11624459 0.34 AT4G21903.3
AT4G21903
MATE efflux family protein
Chr1_-_2621545 0.34 AT1G08315.1
AT1G08315
ARM repeat superfamily protein
Chr3_+_1983731 0.34 AT3G06470.1
AT3G06470
GNS1/SUR4 membrane protein family
Chr5_+_18959094 0.33 AT5G46720.1
AT5G46720
AIG2-like (avirulence induced gene) family protein
Chr3_+_21238223 0.33 AT3G57400.1
AT3G57400
transmembrane protein
Chr2_-_18811085 0.33 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
Chr1_-_29499682 0.33 AT1G78400.1
AT1G78400
Pectin lyase-like superfamily protein
Chr2_-_108231 0.33 AT2G01180.6
PAP1
phosphatidic acid phosphatase 1
Chr1_-_4696023 0.32 AT1G13700.3
AT1G13700.2
PGL1
6-phosphogluconolactonase 1
Chr5_+_8202919 0.32 AT5G24200.1
AT5G24200.2
AT5G24200.3
AT5G24200
alpha/beta-Hydrolases superfamily protein
Chr3_+_13581147 0.32 AT3G33055.1
AT3G33055

Chr2_-_17331173 0.32 AT2G41550.1
AT2G41550
Rho termination factor
Chr1_-_20703460 0.32 AT1G55440.1
AT1G55440
Cysteine/Histidine-rich C1 domain family protein
Chr3_+_22434864 0.30 AT3G60690.1
AT3G60690
SAUR-like auxin-responsive protein family
Chr5_-_26850040 0.30 AT5G67290.1
AT5G67290
FAD-dependent oxidoreductase family protein
Chr3_+_7375158 0.30 AT3G21050.1
AT3G21050

Chr4_-_846792 0.30 AT4G01950.1
AT4G01950.2
GPAT3
glycerol-3-phosphate acyltransferase 3
Chr2_+_15117015 0.29 AT2G36000.2
AT2G36000.1
EMB3114
Mitochondrial transcription termination factor family protein
Chr2_-_15014147 0.29 AT2G35710.3
AT2G35710.4
AT2G35710.1
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_+_19044163 0.29 AT1G51360.1
DABB1
dimeric A/B barrel domainS-protein 1
Chr1_-_9973942 0.29 AT1G28400.1
AT1G28400
GATA zinc finger protein
Chr3_+_7770899 0.29 AT3G22060.1
AT3G22060
Receptor-like protein kinase-related family protein
Chr4_+_10481619 0.28 AT4G19170.1
NCED4
nine-cis-epoxycarotenoid dioxygenase 4
Chr5_-_24975632 0.28 AT5G62170.1
AT5G62170.2
AT5G62170.4
AT5G62170.3
TRM25
LOW protein: M-phase inducer phosphatase-like protein
Chr3_-_6716178 0.28 AT3G19380.1
PUB25
plant U-box 25
Chr2_-_19563960 0.28 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr1_+_7500845 0.28 AT1G21430.1
YUC11
Flavin-binding monooxygenase family protein
Chr3_+_4849539 0.28 AT3G14450.1
CID9
CTC-interacting domain 9
Chr1_-_27640643 0.28 AT1G73500.1
MKK9
MAP kinase kinase 9
Chr1_-_2143977 0.28 AT1G06980.1
AT1G06980
6,7-dimethyl-8-ribityllumazine synthase
Chr1_-_4695723 0.27 AT1G13700.1
PGL1
6-phosphogluconolactonase 1
Chr4_+_14087556 0.27 AT4G28520.1
AT4G28520.2
AT4G28520.4
AT4G28520.5
AT4G28520.3
CRU3
cruciferin 3
Chr4_+_13732832 0.27 AT4G27460.1
CBSX5
Cystathionine beta-synthase (CBS) family protein
Chr5_+_14712734 0.27 AT5G37170.3
AT5G37170.2
AT5G37170.1
AT5G37170
O-methyltransferase family protein
Chr3_+_766685 0.27 AT3G03290.1
AT3G03290
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr5_+_26634275 0.27 AT5G66700.1
HB53
homeobox 53
Chr5_+_1491639 0.27 AT5G05050.1
AT5G05050
Cysteine proteinases superfamily protein
Chr1_+_23778255 0.27 AT1G64065.1
AT1G64065
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr3_-_12451556 0.27 AT3G30775.2
AT3G30775.1
ERD5
Methylenetetrahydrofolate reductase family protein
Chr3_-_668626 0.27 AT3G02960.1
AT3G02960
Heavy metal transport/detoxification superfamily protein
Chr3_-_21507739 0.27 AT3G58070.1
GIS
C2H2 and C2HC zinc fingers superfamily protein
Chr3_+_2671052 0.27 AT3G08800.2
AT3G08800.1
AT3G08800.3
SIEL
ARM repeat superfamily protein
Chr3_-_16024510 0.27 AT3G44350.1
AT3G44350.2
NAC061
NAC domain containing protein 61
Chr5_+_21272824 0.27 AT5G52400.1
CYP715A1
cytochrome P450, family 715, subfamily A, polypeptide 1
Chr1_-_20172364 0.27 AT1G54040.1
ESP
epithiospecifier protein
Chr2_-_8488963 0.26 AT2G19620.1
NDL3
N-MYC downregulated-like 3
Chr4_-_17355891 0.26 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr4_+_5138485 0.26 AT4G08145.1
AT4G08145

Chr1_+_12159884 0.26 AT1G33530.1
AT1G33530
F-box family protein
Chr5_+_8589457 0.26 AT5G24930.1
COL4
zinc finger CONSTANS-like protein
Chr1_+_21241579 0.26 AT1G56670.1
AT1G56670.2
AT1G56670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_3024756 0.25 AT5G09740.2
AT5G09740.1
HAM2
histone acetyltransferase of the MYST family 2
Chr5_+_26767599 0.25 AT5G67070.1
RALFL34
ralf-like 34
Chr5_-_16336017 0.25 AT5G40800.1
AT5G40800
hypothetical protein
Chr1_-_20173933 0.25 AT1G54040.3
AT1G54040.2
ESP
epithiospecifier protein
Chr1_-_7940625 0.25 AT1G22490.2
AT1G22490
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_24505316 0.25 AT5G60910.2
AGL8
AGAMOUS-like 8
Chr3_-_5561126 0.25 AT3G16380.1
PAB6
poly(A) binding protein 6
Chr4_+_12998361 0.25 AT4G25430.1
TRM23
hypothetical protein
Chr1_+_23050381 0.25 AT1G62333.1
AT1G62333
hypothetical protein
Chr5_+_23488745 0.25 AT5G58040.2
AT5G58040.1
FIP1[V]
FIP1[V]-like protein
Chr1_-_25472346 0.25 AT1G67910.2
AT1G67910
hypothetical protein
Chr2_+_9862470 0.25 AT2G23160.1
AT2G23160
F-box family protein
Chr1_+_13499042 0.25 AT1G36105.1
AT1G36105

Chr4_-_1316983 0.25 AT4G02960.1
RE2

Chr5_+_9819256 0.25 AT5G27730.2
AT5G27730.1
AT5G27730
heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624)
Chr2_+_10894253 0.25 AT2G25600.1
SPIK
Shaker pollen inward K+ channel
Chr1_+_11343854 0.25 AT1G31690.1
AT1G31690
Copper amine oxidase family protein
Chr5_-_24506269 0.25 AT5G60910.1
AGL8
AGAMOUS-like 8
Chr1_+_10618893 0.25 AT1G30190.1
AT1G30190
cotton fiber protein
Chr3_+_4583315 0.25 AT3G13898.1
AT3G13898
EPIDERMAL PATTERNING FACTOR-like protein
Chr1_+_214150 0.24 AT1G01590.1
FRO1
ferric reduction oxidase 1
Chr1_+_10696999 0.24 AT1G30340.1
AT1G30340

Chr3_+_17228642 0.24 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr5_-_24853941 0.24 AT5G61890.1
AT5G61890
Integrase-type DNA-binding superfamily protein
Chr2_+_12418017 0.24 AT2G28920.1
AT2G28920
RING/U-box superfamily protein
Chr2_-_8488269 0.24 AT2G19620.2
NDL3
N-MYC downregulated-like 3
Chr5_-_23163264 0.24 AT5G57170.2
AT5G57170.1
AT5G57170
Tautomerase/MIF superfamily protein
Chr1_+_630374 0.24 AT1G02850.3
AT1G02850.2
AT1G02850.1
AT1G02850.5
AT1G02850.4
BGLU11
beta glucosidase 11
Chr3_-_5227935 0.24 AT3G15480.1
AT3G15480
fiber (DUF1218)
Chr5_+_7168106 0.24 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr2_+_17995901 0.24 AT2G43310.1
AT2G43310
Ribosomal L18p/L5e family protein
Chr1_+_22374909 0.24 AT1G60783.1
AT1G60783
cyclin-dependent kinase inhibitor SMR2-like protein
Chr1_-_6627688 0.23 AT1G19210.1
AT1G19210
Integrase-type DNA-binding superfamily protein
Chr1_-_20856122 0.23 AT1G55790.1
AT1G55790
ferredoxin-fold anticodon-binding domain protein
Chr3_+_13601800 0.23 AT3G33058.1
AT3G33058

Chr3_-_22651598 0.23 AT3G61190.2
AT3G61190.1
BAP1
BON association protein 1
Chr1_-_25472577 0.23 AT1G67910.1
AT1G67910
hypothetical protein
Chr3_-_6617677 0.23 AT3G19150.2
KRP6
KIP-related protein 6
Chr2_+_19105112 0.23 AT2G46530.3
ARF11
auxin response factor 11
Chr5_-_24788060 0.23 AT5G61680.1
AT5G61680
Pectin lyase-like superfamily protein
Chr1_-_11012280 0.23 AT1G30925.1
AT1G30925
F-box/associated interaction domain protein
Chr3_-_3956827 0.23 AT3G12470.1
AT3G12470
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr2_-_16488645 0.23 AT2G39490.1
AT2G39490
F-box family protein
Chr5_-_7643098 0.22 AT5G22860.4
AT5G22860.3
AT5G22860.1
AT5G22860.6
AT5G22860.7
AT5G22860.8
AT5G22860.2
AT5G22860.5
AT5G22860
Serine carboxypeptidase S28 family protein
Chr3_-_7972907 0.22 AT3G22500.1
ATECP31
Seed maturation protein
Chr1_-_5003637 0.22 AT1G14600.1
AT1G14600
Homeodomain-like superfamily protein
Chr3_-_672493 0.22 AT3G02980.1
AT3G02980.2
MCC1
MEIOTIC CONTROL OF CROSSOVERS1
Chr4_+_12837353 0.22 AT4G24972.1
TPD1
tapetum determinant 1
Chr2_+_14135050 0.22 AT2G33350.4
AT2G33350.5
AT2G33350
CCT motif family protein
Chr2_+_14507294 0.22 AT2G34360.2
AT2G34360.1
AT2G34360
MATE efflux family protein
Chr1_+_2662967 0.22 AT1G08440.1
AT1G08440
aluminum activated malate transporter family protein
Chr4_+_631136 0.22 AT4G01490.1
AT4G01490

Chr1_-_20756656 0.22 AT1G55560.1
sks14
SKU5 similar 14
Chr4_+_17927198 0.22 AT4G38225.1
AT4G38225.3
AT4G38225.2
AT4G38225
glycerol kinase
Chr4_-_17059627 0.22 AT4G36070.2
AT4G36070.1
CPK18
calcium-dependent protein kinase 18
Chr3_+_2003393 0.22 AT3G06490.1
MYB108
myb domain protein 108
Chr1_+_18091681 0.22 AT1G48910.1
YUC10
Flavin-containing monooxygenase family protein
Chr3_+_22336013 0.22 AT3G60420.1
AT3G60420
phosphoglycerate mutase family protein
Chr1_-_17693887 0.22 AT1G47980.1
AT1G47980
desiccation-like protein
Chr3_+_21732122 0.21 AT3G58770.1
AT3G58770
hypothetical protein
Chr3_+_7730082 0.21 AT3G21940.2
AT3G21940
Receptor protein kinase-like protein
Chr2_+_16997078 0.21 AT2G40740.3
AT2G40740.2
AT2G40740.1
WRKY55
WRKY DNA-binding protein 55
Chr1_-_7940805 0.21 AT1G22490.1
AT1G22490
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_+_9546259 0.21 AT3G26120.1
TEL1
terminal EAR1-like 1
Chr3_+_5121303 0.21 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr2_+_6018558 0.21 AT2G14210.2
AT2G14210.1
AGL44
AGAMOUS-like 44
Chr4_+_1975544 0.21 AT4G04120.1
AT4G04120

Chr1_-_10412997 0.21 AT1G29740.1
AT1G29740.2
AT1G29740
Leucine-rich repeat transmembrane protein kinase
Chr1_-_5645443 0.21 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr3_+_11209586 0.21 AT3G29255.1
AT3G29255
Putative pentacyclic triterpene synthase 7
Chr2_+_15325237 0.21 AT2G36540.1
AT2G36540
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_+_24342732 0.21 AT1G65483.2
AT1G65483
hypothetical protein
Chr4_+_13809779 0.21 AT4G27652.1
AT4G27652
hypothetical protein
Chr2_-_18734341 0.21 AT2G45450.1
ZPR1
binding protein
Chr1_+_24342483 0.21 AT1G65483.1
AT1G65483
hypothetical protein
Chr3_-_4085970 0.21 AT3G12840.1
AT3G12840
F-box/FBD-like domain protein
Chr1_+_8339668 0.21 AT1G23500.1
AT1G23500
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_5575910 0.21 AT5G16960.1
AT5G16960.2
AT5G16960
Zinc-binding dehydrogenase family protein
Chr5_+_8893989 0.21 AT5G25550.1
AT5G25550
Leucine-rich repeat (LRR) family protein
Chr2_-_10697175 0.21 AT2G25130.1
AT2G25130
ARM repeat superfamily protein
Chr1_-_1969656 0.21 AT1G06460.1
ACD32.1
alpha-crystallin domain 32.1
Chr5_+_24847310 0.21 AT5G61865.1
AT5G61865
hypothetical protein
Chr2_-_9836309 0.21 AT2G23096.1
P4H13
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_25875662 0.20 AT1G68830.1
STN7
Serine/Threonine kinase domain protein
Chr3_+_22680960 0.20 AT3G61280.1
AT3G61280.2
AT3G61280
O-glucosyltransferase rumi-like protein (DUF821)
Chr3_-_6617951 0.20 AT3G19150.3
AT3G19150.1
KRP6
KIP-related protein 6
Chr4_-_10762104 0.20 AT4G19800.1
AT4G19800
Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
Chr2_-_8487996 0.20 AT2G19620.3
NDL3
N-MYC downregulated-like 3
Chr2_+_14133810 0.20 AT2G33350.2
AT2G33350.3
AT2G33350.1
AT2G33350
CCT motif family protein
Chr1_-_6703368 0.20 AT1G19390.1
AT1G19390
Wall-associated kinase family protein
Chr2_-_832619 0.20 AT2G02860.2
AT2G02860.1
SUT2
sucrose transporter 2
Chr1_-_29317186 0.20 AT1G77980.1
AGL66
AGAMOUS-like 66
Chr1_+_21641091 0.20 AT1G58330.1
ZW2
transcription factor-like protein
Chr2_-_12902815 0.20 AT2G30240.1
ATCHX13
Cation/hydrogen exchanger family protein
Chr3_+_7729646 0.20 AT3G21940.1
AT3G21940
Receptor protein kinase-like protein
Chr2_-_18324561 0.20 AT2G44380.1
AT2G44380
Cysteine/Histidine-rich C1 domain family protein
Chr5_-_5233036 0.20 AT5G16023.1
RTFL18
ROTUNDIFOLIA like 18
Chr3_+_7054828 0.20 AT3G20220.1
AT3G20220
SAUR-like auxin-responsive protein family
Chr4_+_10273480 0.20 AT4G18660.1
AT4G18660
delay of germination protein
Chr1_+_25554721 0.20 AT1G68180.1
AT1G68180
RING/U-box superfamily protein
Chr5_-_26515800 0.19 AT5G66380.1
FOLT1
folate transporter 1
Chr5_-_15074851 0.19 AT5G37870.1
AT5G37870
Protein with RING/U-box and TRAF-like domain
Chr5_-_19172956 0.19 AT5G47220.1
ERF2
ethylene responsive element binding factor 2
Chr1_+_19012173 0.19 AT1G51290.1
AT1G51290
F-box and associated interaction domains-containing protein
Chr4_+_17349218 0.19 AT4G36830.2
AT4G36830.1
HOS3-1
GNS1/SUR4 membrane protein family
Chr5_-_5884770 0.19 AT5G17810.2
AT5G17810.3
WOX12
WUSCHEL related homeobox 12
Chr4_+_14368877 0.19 AT4G29140.1
ADS1
MATE efflux family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G50670

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.8 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.2 0.5 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.2 0.5 GO:0033530 raffinose metabolic process(GO:0033530)
0.2 0.8 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.7 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.2 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.1 0.7 GO:0009745 sucrose mediated signaling(GO:0009745)
0.1 0.4 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.9 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.2 GO:0017196 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 0.2 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.7 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.1 0.2 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.4 GO:0048830 adventitious root development(GO:0048830)
0.1 0.5 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.4 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.0 0.6 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.4 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 0.2 GO:0051180 vitamin transport(GO:0051180)
0.0 0.1 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.0 0.3 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.2 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.4 GO:0080086 stamen filament development(GO:0080086)
0.0 0.2 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 0.1 GO:0006729 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.0 0.9 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.4 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.1 GO:0071902 positive regulation of protein serine/threonine kinase activity(GO:0071902)
0.0 0.6 GO:0010152 pollen maturation(GO:0010152)
0.0 0.5 GO:0009750 response to fructose(GO:0009750)
0.0 0.6 GO:0009065 glutamine family amino acid catabolic process(GO:0009065)
0.0 0.2 GO:0009643 photosynthetic acclimation(GO:0009643)
0.0 1.1 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.3 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.4 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.4 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.3 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.2 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.3 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.2 GO:0001709 cell fate determination(GO:0001709)
0.0 0.1 GO:0048451 petal formation(GO:0048451)
0.0 0.2 GO:0010358 leaf shaping(GO:0010358)
0.0 0.2 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.0 0.4 GO:0080027 response to herbivore(GO:0080027)
0.0 0.4 GO:0006949 syncytium formation(GO:0006949)
0.0 0.1 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.3 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.2 GO:0019430 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.0 0.2 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.0 0.2 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.4 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.4 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.1 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.2 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 1.1 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.0 0.4 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.4 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.2 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.2 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.4 GO:0042026 protein refolding(GO:0042026)
0.0 0.2 GO:0015743 malate transport(GO:0015743)
0.0 0.3 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.1 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.2 GO:0015770 sucrose transport(GO:0015770)
0.0 0.1 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.2 GO:0048658 anther wall tapetum development(GO:0048658)
0.0 0.1 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.0 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.7 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.4 GO:0048500 signal recognition particle(GO:0048500)
0.0 0.1 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.0 0.4 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.1 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.2 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.6 GO:0005811 lipid particle(GO:0005811)
0.0 0.2 GO:0042644 chloroplast nucleoid(GO:0042644)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.2 0.5 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.2 0.8 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 0.3 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 0.4 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.6 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.3 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.2 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.2 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.1 0.4 GO:0030332 cyclin binding(GO:0030332)
0.1 0.9 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.5 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.2 GO:0016436 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.3 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.0 0.3 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.2 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.1 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.0 0.5 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 0.1 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 1.3 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.4 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.1 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.0 0.6 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0 0.2 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.1 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.0 0.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.4 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.3 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.1 GO:0003933 GTP cyclohydrolase activity(GO:0003933)
0.0 0.1 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.0 0.2 GO:0009922 fatty acid elongase activity(GO:0009922)
0.0 0.1 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.0 0.2 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.2 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.3 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.5 GO:0004402 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 0.5 GO:0015925 galactosidase activity(GO:0015925)
0.0 0.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.0 0.2 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.2 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.2 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.2 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.2 GO:0008061 chitin binding(GO:0008061)
0.0 0.1 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.2 GO:0004656 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.4 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.2 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 0.4 GO:0051787 misfolded protein binding(GO:0051787)
0.0 0.1 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.1 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.2 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.3 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.0 0.2 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID TELOMERASE PATHWAY Regulation of Telomerase

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.0 0.1 REACTOME NUCLEAR SIGNALING BY ERBB4 Genes involved in Nuclear signaling by ERBB4
0.0 0.1 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines