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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G47230

Z-value: 0.73

Transcription factors associated with AT5G47230

Gene Symbol Gene ID Gene Info
AT5G47230
AT5G47230 ethylene responsive element binding factor 5

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF5arTal_v1_Chr5_+_19179881_19179881-0.293.2e-01Click!

Activity profile of AT5G47230 motif

Sorted Z-values of AT5G47230 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_7758275 0.78 AT4G13340.1
LRX3
Leucine-rich repeat (LRR) family protein
Chr3_-_8902835 0.71 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
Chr2_-_13864596 0.62 AT2G32690.2
AT2G32690.3
AT2G32690.5
AT2G32690.4
AT2G32690.1
GRP23
glycine-rich protein 23
Chr1_+_28174187 0.57 AT1G75030.1
TLP-3
thaumatin-like protein 3
Chr3_+_3595694 0.56 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
Chr2_-_18821889 0.55 AT2G45680.1
TCP9
TCP family transcription factor
Chr4_-_14859503 0.53 AT4G30370.1
AT4G30370
RING/U-box superfamily protein
Chr2_+_11012499 0.51 AT2G25810.1
TIP4%3B1
tonoplast intrinsic protein 4;1
Chr4_+_15819489 0.50 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr4_-_13016235 0.49 AT4G25470.1
CBF2
C-repeat/DRE binding factor 2
Chr5_+_6833564 0.49 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr4_-_947075 0.48 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr4_-_10278794 0.47 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
Chr2_+_15165213 0.47 AT2G36120.1
DOT1
Glycine-rich protein family
Chr5_-_26810116 0.46 AT5G67190.1
DEAR2
DREB and EAR motif protein 2
Chr1_-_5645443 0.46 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr5_-_17831336 0.43 AT5G44260.1
AT5G44260
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr4_-_947249 0.42 AT4G02130.1
GATL6
galacturonosyltransferase 6
Chr1_-_13125263 0.41 AT1G35580.3
AT1G35580.1
AT1G35580.2
CINV1
cytosolic invertase 1
Chr3_-_2130451 0.41 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr5_+_4370692 0.40 AT5G13580.1
ABCG6
ABC-2 type transporter family protein
Chr4_+_12086898 0.40 AT4G23060.1
IQD22
IQ-domain 22
Chr3_-_8064649 0.39 AT3G22800.1
AT3G22800
Leucine-rich repeat (LRR) family protein
Chr4_+_14566183 0.38 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4
Chr5_+_4591690 0.38 AT5G14230.1
AT5G14230
ankyrin
Chr4_+_160643 0.36 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr3_-_1010573 0.35 AT3G03920.1
AT3G03920
H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
Chr5_+_7207166 0.35 AT5G21170.3
AKINBETA1
5'-AMP-activated protein kinase beta-2 subunit protein
Chr5_+_7205477 0.34 AT5G21170.1
AKINBETA1
5'-AMP-activated protein kinase beta-2 subunit protein
Chr5_+_4593198 0.33 AT5G14230.2
AT5G14230
ankyrin
Chr5_+_7205667 0.33 AT5G21170.2
AKINBETA1
5'-AMP-activated protein kinase beta-2 subunit protein
Chr3_+_3591251 0.33 AT3G11420.1
AT3G11420
beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604)
Chr3_-_17138259 0.32 AT3G46550.1
SOS5
Fasciclin-like arabinogalactan family protein
Chr5_-_26456154 0.32 AT5G66200.1
ARO2
armadillo repeat only 2
Chr2_+_14856664 0.32 AT2G35270.1
GIK
Putative AT-hook DNA-binding family protein
Chr3_+_9480746 0.31 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
Chr1_+_2649459 0.31 AT1G08420.1
AT1G08420.2
BSL2
BRI1 suppressor 1 (BSU1)-like 2
Chr1_+_5451432 0.31 AT1G15840.1
AT1G15840
hypothetical protein
Chr2_+_2055519 0.30 AT2G05580.1
AT2G05580
Glycine-rich protein family
Chr5_+_1378954 0.30 AT5G04770.3
CAT6
cationic amino acid transporter 6
Chr5_+_4441858 0.30 AT5G13760.1
AT5G13760
Plasma-membrane choline transporter family protein
Chr1_+_6294160 0.29 AT1G18280.1
AT1G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_1378788 0.29 AT5G04770.2
CAT6
cationic amino acid transporter 6
Chr5_+_1378621 0.29 AT5G04770.1
CAT6
cationic amino acid transporter 6
Chr2_+_17543005 0.29 AT2G42040.1
AT2G42040
WRC protein
Chr4_-_7421828 0.29 AT4G12520.1
AT4G12520
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_270221 0.28 AT3G01750.1
AT3G01750.2
AT3G01750
Ankyrin repeat family protein
Chr5_+_1949315 0.28 AT5G06380.1
AT5G06380
hypothetical protein
Chr4_+_13138957 0.27 AT4G25840.1
GPP1
glycerol-3-phosphatase 1
Chr4_+_15490566 0.27 AT4G32030.1
AT4G32030
hypothetical protein
Chr4_-_4074735 0.27 AT4G06746.1
RAP2.9
related to AP2 9
Chr1_-_28551836 0.27 AT1G76090.1
SMT3
sterol methyltransferase 3
Chr2_-_15790139 0.27 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr4_+_15490740 0.27 AT4G32030.2
AT4G32030
hypothetical protein
Chr1_-_18413016 0.27 AT1G49750.1
AT1G49750
Leucine-rich repeat (LRR) family protein
Chr2_+_114926 0.26 AT2G01190.1
PDE331
Octicosapeptide/Phox/Bem1p family protein
Chr3_+_266557 0.26 AT3G01730.1
AT3G01730
transmembrane protein
Chr5_+_3253122 0.26 AT5G10340.1
AT5G10340
F-box family protein
Chr1_-_4892332 0.26 AT1G14330.1
AT1G14330
Galactose oxidase/kelch repeat superfamily protein
Chr2_+_9917443 0.25 AT2G23310.1
AT2G23310.2
ATRER1C1
Rer1 family protein
Chr1_+_12685176 0.25 AT1G34630.1
AT1G34630.4
AT1G34630.3
AT1G34630.2
AT1G34630
transmembrane protein
Chr2_+_801527 0.25 AT2G02810.1
UTR1
UDP-galactose transporter 1
Chr3_+_5121303 0.25 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr1_+_29502506 0.24 AT1G78410.1
AT1G78410.2
AT1G78410
VQ motif-containing protein
Chr5_+_23384255 0.24 AT5G57710.1
AT5G57710
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Chr1_-_20967162 0.24 AT1G56060.2
AT1G56060.1
AT1G56060
cysteine-rich/transmembrane domain protein B
Chr1_-_1169034 0.24 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
Chr3_+_23142485 0.24 AT3G62570.1
AT3G62570
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_4986377 0.24 AT5G15350.1
ENODL17
early nodulin-like protein 17
Chr3_-_20718866 0.24 AT3G55840.1
AT3G55840
Hs1pro-1 protein
Chr1_+_28704963 0.24 AT1G76500.1
SOB3
Putative AT-hook DNA-binding family protein
Chr3_-_8807460 0.24 AT3G24300.1
AMT1%3B3
ammonium transporter 1;3
Chr3_+_9809582 0.23 AT3G26700.1
AT3G26700.2
AT3G26700.3
AT3G26700.4
AT3G26700.5
AT3G26700
Protein kinase superfamily protein
Chr2_-_19650287 0.23 AT2G48030.1
AT2G48030.2
AT2G48030
DNAse I-like superfamily protein
Chr1_+_3999157 0.23 AT1G11850.2
AT1G11850.4
AT1G11850.3
AT1G11850.1
AT1G11850
transmembrane protein
Chr1_-_167842 0.23 AT1G01453.2
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr1_+_25255155 0.23 AT1G67420.3
AT1G67420.4
AT1G67420.2
AT1G67420.5
AT1G67420.6
AT1G67420.1
AT1G67420
Zn-dependent exopeptidases superfamily protein
Chr4_+_7239200 0.23 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
Chr2_-_15789605 0.23 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr2_-_9527845 0.23 AT2G22430.1
HB6
homeobox protein 6
Chr4_+_578028 0.23 AT4G01410.1
AT4G01410
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_+_29387672 0.23 AT1G78100.1
AUF1
F-box family protein
Chr5_-_24317935 0.23 AT5G60460.2
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
Chr5_+_24480291 0.23 AT5G60850.1
OBP4
OBF binding protein 4
Chr1_-_168088 0.22 AT1G01453.1
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr1_-_24362054 0.22 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr5_-_37999 0.22 AT5G01100.1
FRB1
O-fucosyltransferase family protein
Chr4_+_16402129 0.22 AT4G34265.1
AT4G34265.4
AT4G34265.3
AT4G34265.2
AT4G34265.5
AT4G34265.6
AT4G34265
hypothetical protein
Chr1_-_8961183 0.21 AT1G25510.1
AT1G25510
Eukaryotic aspartyl protease family protein
Chr5_+_4156501 0.21 AT5G13100.1
AT5G13100
Gap junction beta-4 protein
Chr1_-_23892193 0.20 AT1G64380.1
AT1G64380
Integrase-type DNA-binding superfamily protein
Chr5_-_25945442 0.20 AT5G64920.1
CIP8
COP1-interacting protein 8
Chr3_-_5618322 0.20 AT3G16510.1
AT3G16510
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr3_-_22280691 0.20 AT3G60280.1
UCC3
uclacyanin 3
Chr2_-_10446434 0.20 AT2G24580.1
AT2G24580
FAD-dependent oxidoreductase family protein
Chr5_-_6363682 0.20 AT5G19040.2
AT5G19040.1
IPT5
isopentenyltransferase 5
Chr5_-_24318241 0.20 AT5G60460.1
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
Chr1_-_12059792 0.19 AT1G33250.1
AT1G33250
beta-1,3-n-acetylglucosaminyltransferase radical fringe protein, putative (DUF604)
Chr2_+_19079305 0.19 AT2G46490.1
AT2G46490
hypothetical protein
Chr4_+_2505979 0.19 AT4G04925.1
AT4G04925
transmembrane protein
Chr3_+_8410287 0.19 AT3G23450.2
AT3G23450.4
AT3G23450.3
AT3G23450
transmembrane protein
Chr5_+_15543115 0.19 AT5G38820.1
AT5G38820.2
AT5G38820
Transmembrane amino acid transporter family protein
Chr1_-_29305411 0.19 AT1G77940.1
AT1G77940
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Chr4_-_15664948 0.19 AT4G32460.2
AT4G32460.1
AT4G32460.3
AT4G32460
choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
Chr5_-_3728726 0.19 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
Chr4_+_929869 0.19 AT4G02100.1
AT4G02100
Heat shock protein DnaJ with tetratricopeptide repeat-containing protein
Chr5_-_7647679 0.19 AT5G22870.1
AT5G22870
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_+_26765992 0.19 AT5G67060.2
AT5G67060.1
HEC1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_12890261 0.18 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
Chr2_-_19664767 0.18 AT2G48075.1
AT2G48075
hypothetical protein
Chr1_-_3671191 0.18 AT1G10990.1
AT1G10990.2
AT1G10990
transmembrane protein
Chr5_+_15439249 0.18 AT5G38560.1
PERK8
Protein kinase superfamily protein
Chr1_-_30129649 0.18 AT1G80080.1
TMM
Leucine-rich repeat (LRR) family protein
Chr5_+_17731005 0.17 AT5G44060.1
AT5G44060
embryo sac development arrest protein
Chr2_+_15119516 0.17 AT2G36010.3
AT2G36010.1
AT2G36010.2
E2F3
E2F transcription factor 3
Chr3_+_5298991 0.17 AT3G15640.1
AT3G15640.2
AT3G15640
Rubredoxin-like superfamily protein
Chr4_-_6796398 0.17 AT4G11140.1
CRF1
cytokinin response factor 1
Chr4_+_1573266 0.17 AT4G03550.1
GSL05
glucan synthase-like 5
Chr2_-_15186852 0.17 AT2G36210.1
AT2G36210
SAUR-like auxin-responsive protein family
Chr4_+_2536925 0.17 AT4G04970.1
GSL1
glucan synthase-like 1
Chr5_-_23640973 0.17 AT5G58470.2
AT5G58470.1
TAF15b
TBP-associated factor 15B
Chr5_-_26104614 0.17 AT5G65310.1
HB5
homeobox protein 5
Chr5_-_7079077 0.16 AT5G20860.1
AT5G20860.2
AT5G20860
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_15543481 0.16 AT5G38820.3
AT5G38820
Transmembrane amino acid transporter family protein
Chr4_+_10061214 0.16 AT4G18170.1
WRKY28
WRKY DNA-binding protein 28
Chr3_+_5061681 0.16 AT3G15030.2
AT3G15030.3
AT3G15030.4
AT3G15030.1
TCP4
TCP family transcription factor 4
Chr4_+_17768042 0.16 AT4G37790.1
HAT22
Homeobox-leucine zipper protein family
Chr3_+_2745534 0.16 AT3G09000.1
AT3G09000
proline-rich family protein
Chr5_+_4826141 0.16 AT5G14920.1
AT5G14920.2
AT5G14920
Gibberellin-regulated family protein
Chr3_+_16871578 0.16 AT3G45890.1
RUS1
root UVB sensitive-like protein (Protein of unknown function, DUF647)
Chr1_+_19045212 0.16 AT1G51370.1
AT1G51370
F-box/RNI-like/FBD-like domains-containing protein
Chr5_-_21285366 0.16 AT5G52430.1
AT5G52430
hydroxyproline-rich glycoprotein family protein
Chr2_-_11009861 0.16 AT2G25800.1
AT2G25800
elongation factor Ts (DUF810)
Chr4_-_18096218 0.15 AT4G38760.1
AT4G38760
nucleoporin (DUF3414)
Chr4_+_6952799 0.15 AT4G11430.1
AT4G11430
hydroxyproline-rich glycoprotein family protein
Chr3_-_18594715 0.15 AT3G50140.1
AT3G50140.2
AT3G50140
transmembrane protein, putative (DUF247)
Chr3_+_20210792 0.15 AT3G54600.1
DJ1F
Class I glutamine amidotransferase-like superfamily protein
Chr2_-_183639 0.15 AT2G01420.3
AT2G01420.1
AT2G01420.2
PIN4
Auxin efflux carrier family protein
Chr1_+_28163344 0.15 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
Chr3_+_677240 0.15 AT3G03000.1
AT3G03000
EF hand calcium-binding protein family
Chr1_-_8310916 0.15 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein
Chr3_+_2413623 0.15 AT3G07565.1
AT3G07565.3
AT3G07565.4
AT3G07565.2
AT3G07565
histone H2A deubiquitinase (DUF3755)
Chr5_+_22957629 0.15 AT5G56750.1
NDL1
N-MYC downregulated-like 1
Chr1_-_16821823 0.15 AT1G44224.1
AT1G44224
ECA1 gametogenesis related family protein
Chr4_-_59495 0.15 AT4G00150.1
HAM3
GRAS family transcription factor
Chr5_-_5502856 0.15 AT5G16740.1
AT5G16740
Transmembrane amino acid transporter family protein
Chr2_-_7577846 0.14 AT2G17450.1
RHA3A
RING-H2 finger A3A
Chr4_+_13320408 0.14 AT4G26330.1
AT4G26330.2
UNE17
Subtilisin-like serine endopeptidase family protein
Chr3_-_42159 0.14 AT3G01120.1
MTO1
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr1_+_19045059 0.14 AT1G51370.3
AT1G51370
F-box/RNI-like/FBD-like domains-containing protein
Chr1_+_24929887 0.14 AT1G66820.1
AT1G66820
glycine-rich protein
Chr1_-_26888364 0.14 AT1G71340.1
GDPD4
PLC-like phosphodiesterases superfamily protein
Chr4_-_18073182 0.14 AT4G38680.1
GRP2
glycine rich protein 2
Chr5_-_1931782 0.14 AT5G06320.1
NHL3
NDR1/HIN1-like 3
Chr5_-_6230630 0.14 AT5G18680.2
AT5G18680.1
TLP11
tubby like protein 11
Chr5_+_26939159 0.14 AT5G67520.3
AT5G67520.2
AT5G67520.1
APK4
adenosine-5'-phosphosulfate (APS) kinase 4
Chr4_-_11185844 0.13 AT4G20900.2
AT4G20900.1
MS5
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_10924708 0.13 AT3G28917.1
MIF2
mini zinc finger 2
Chr1_+_18035967 0.13 AT1G48750.1
AT1G48750
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_15828228 0.13 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr1_-_30044297 0.13 AT1G79860.1
ROPGEF12
RHO guanyl-nucleotide exchange factor 12
Chr3_+_11247011 0.13 AT3G29300.1
AT3G29300
transmembrane protein
Chr1_-_17973303 0.13 AT1G48610.2
AT1G48610.1
AT1G48610
AT hook motif-containing protein
Chr1_+_618061 0.13 AT1G02810.1
AT1G02810
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_+_1589973 0.13 AT1G05420.2
AT1G05420.1
OFP12
ovate family protein 12
Chr5_+_12190079 0.13 AT5G32520.1
AT5G32520

Chr1_+_26555705 0.13 AT1G70460.1
PERK13
root hair specific 10
Chr1_+_1206760 0.13 AT1G04445.2
AT1G04445
C2H2-like zinc finger protein
Chr3_+_1936050 0.13 AT3G06380.2
AT3G06380.1
TLP9
tubby-like protein 9
Chr1_-_23754348 0.13 AT1G64030.1
SRP3
serpin 3
Chr5_-_6363413 0.12 AT5G19040.3
IPT5
isopentenyltransferase 5
Chr5_+_17076227 0.12 AT5G42635.1
AT5G42635
glycine-rich protein
Chr4_-_15664780 0.12 AT4G32460.4
AT4G32460
choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
Chr5_-_21477024 0.12 AT5G52950.2
AT5G52950.1
AT5G52950
LIM domain protein
Chr5_+_21700187 0.12 AT5G53460.1
AT5G53460.3
AT5G53460.2
GLT1
NADH-dependent glutamate synthase 1
Chr2_-_10122479 0.12 AT2G23770.1
LYK4
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
Chr3_-_3331282 0.12 AT3G10650.2
NUP1
nuclear pore complex protein
Chr5_+_22958509 0.12 AT5G56750.2
NDL1
N-MYC downregulated-like 1
Chr5_+_198906 0.12 AT5G01500.1
TAAC
thylakoid ATP/ADP carrier
Chr5_-_12766533 0.12 AT5G33533.1
AT5G33533

Chr5_-_3989647 0.12 AT5G12330.3
AT5G12330.2
AT5G12330.4
AT5G12330.1
LRP1
Lateral root primordium (LRP) protein-like protein
Chr3_-_3098417 0.12 AT3G10040.1
AT3G10040
sequence-specific DNA binding transcription factor
Chr1_+_19045615 0.12 AT1G51370.2
AT1G51370
F-box/RNI-like/FBD-like domains-containing protein
Chr5_-_1467161 0.12 AT5G04970.1
AT5G04970
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_-_9406369 0.12 AT1G27090.1
AT1G27090
glycine-rich protein
Chr3_-_20418910 0.12 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr3_-_3331007 0.12 AT3G10650.1
NUP1
nuclear pore complex protein
Chr3_-_17309938 0.12 AT3G46980.2
AT3G46980.8
AT3G46980.7
AT3G46980.3
AT3G46980.5
AT3G46980.6
AT3G46980.1
AT3G46980.4
PHT4%3B3
phosphate transporter 4;3
Chr1_+_12685824 0.12 AT1G34630.5
AT1G34630
transmembrane protein
Chr2_+_15075591 0.12 AT2G35920.1
AT2G35920
RNA helicase family protein
Chr2_-_16740486 0.11 AT2G40090.1
ATH9
ABC2 homolog 9
Chr2_+_15075343 0.11 AT2G35920.2
AT2G35920.3
AT2G35920
RNA helicase family protein
Chr2_+_19472573 0.11 AT2G47450.1
CAO
chloroplast signal recognition particle component (CAO)
Chr1_+_18416474 0.11 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
Chr3_-_23411988 0.11 AT3G63390.1
AT3G63390
hypothetical protein
Chr4_+_17858351 0.11 AT4G38000.1
DOF4.7
DNA binding with one finger 4.7
Chr2_+_15592552 0.11 AT2G37110.1
AT2G37110
PLAC8 family protein
Chr5_+_26394823 0.11 AT5G65990.1
AT5G65990
Transmembrane amino acid transporter family protein
Chr3_+_11246750 0.11 AT3G29300.2
AT3G29300
transmembrane protein
Chr3_-_4660945 0.11 AT3G14067.1
AT3G14067
Subtilase family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G47230

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.2 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.2 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.4 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.2 GO:0010500 transmitting tissue development(GO:0010500)
0.1 0.3 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 1.2 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.2 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.0 0.1 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.0 0.5 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.1 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.0 0.4 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.4 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.0 0.5 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.2 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 0.2 GO:0010376 stomatal complex formation(GO:0010376)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 1.0 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.4 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.1 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.2 GO:0048830 adventitious root development(GO:0048830)
0.0 0.5 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.0 0.5 GO:0006949 syncytium formation(GO:0006949)
0.0 0.1 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.2 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.1 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.0 1.0 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.0 0.2 GO:0042659 regulation of cell fate specification(GO:0042659)
0.0 0.9 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.1 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.0 0.3 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.2 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.1 GO:0043132 NAD transport(GO:0043132)
0.0 0.3 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.1 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.0 0.1 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.0 0.2 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.0 0.0 GO:1900151 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.0 0.1 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.1 GO:0010117 photoprotection(GO:0010117)
0.0 0.1 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.3 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.0 GO:1902975 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.0 0.1 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 0.3 GO:2000012 regulation of auxin polar transport(GO:2000012)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.4 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.1 0.4 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.3 GO:0009897 external side of plasma membrane(GO:0009897)
0.0 0.3 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.5 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.2 GO:0034399 nuclear periphery(GO:0034399)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.1 0.3 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 1.9 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.4 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.3 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 0.4 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.1 0.6 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.5 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.3 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 0.3 GO:0005223 intracellular cGMP activated cation channel activity(GO:0005223)
0.1 0.2 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.1 0.2 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.2 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.4 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.3 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.9 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.4 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.2 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.9 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.2 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.0 0.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.1 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.1 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 0.1 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.0 0.1 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.1 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.2 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.1 GO:0035198 miRNA binding(GO:0035198)
0.0 0.2 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.1 GO:0004834 tryptophan synthase activity(GO:0004834)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.0 0.2 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.0 0.2 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism