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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G45300

Z-value: 1.02

Transcription factors associated with AT5G45300

Gene Symbol Gene ID Gene Info
AT5G45300
AT5G45300 beta-amylase 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
BMY2arTal_v1_Chr5_+_18353525_18353610-0.478.8e-02Click!

Activity profile of AT5G45300 motif

Sorted Z-values of AT5G45300 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_4104463 2.08 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_-_82182 1.63 AT3G01260.1
AT3G01260
Galactose mutarotase-like superfamily protein
Chr5_+_5205869 1.61 AT5G15950.1
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr5_+_5206156 1.58 AT5G15950.2
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr4_-_16285229 1.45 AT4G33980.1
AT4G33980
hypothetical protein
Chr4_-_13022996 1.45 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
Chr4_-_16285059 1.43 AT4G33980.2
AT4G33980
hypothetical protein
Chr4_+_12827856 1.35 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
Chr2_+_538250 1.34 AT2G02120.1
PDF2.1
Scorpion toxin-like knottin superfamily protein
Chr4_+_10707344 1.31 AT4G19690.2
AT4G19690.1
IRT1
iron-regulated transporter 1
Chr3_-_21097481 1.24 AT3G57010.1
AT3G57010
Calcium-dependent phosphotriesterase superfamily protein
Chr2_-_18821889 1.21 AT2G45680.1
TCP9
TCP family transcription factor
Chr5_+_23337832 1.20 AT5G57625.1
AT5G57625
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr1_-_27998821 1.19 AT1G74500.1
BS1
activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1
Chr2_-_17710433 1.18 AT2G42530.1
COR15B
cold regulated 15b
Chr1_+_209208 1.13 AT1G01580.1
FRO2
ferric reduction oxidase 2
Chr2_-_18082776 1.13 AT2G43590.1
AT2G43590
Chitinase family protein
Chr1_+_208995 1.13 AT1G01580.2
FRO2
ferric reduction oxidase 2
Chr2_-_19352088 1.12 AT2G47140.1
SDR5
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_1835047 1.12 AT5G06090.1
GPAT7
glycerol-3-phosphate acyltransferase 7
Chr4_+_13812989 1.08 AT4G27657.1
AT4G27657
hypothetical protein
Chr3_-_21085245 1.05 AT3G56970.1
bHLH38
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_+_2176788 1.05 AT3G06890.1
AT3G06890
transmembrane protein
Chr3_-_17760950 1.04 AT3G48100.1
RR5
response regulator 5
Chr4_-_682601 1.03 AT4G01575.1
AT4G01575
serine protease inhibitor, Kazal-type family protein
Chr5_+_22388782 1.03 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr5_+_22388521 0.99 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr5_-_24377206 0.98 AT5G60660.1
PIP2%3B4
plasma membrane intrinsic protein 2;4
Chr2_+_17527167 0.97 AT2G41990.1
AT2G41990
late embryogenesis abundant protein
Chr3_+_415389 0.96 AT3G02230.1
RGP1
reversibly glycosylated polypeptide 1
Chr2_-_9538963 0.96 AT2G22470.1
AGP2
arabinogalactan protein 2
Chr1_-_26163715 0.95 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr3_+_1593668 0.95 AT3G05500.2
AT3G05500
Rubber elongation factor protein (REF)
Chr4_-_810574 0.95 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
Chr3_+_4449259 0.95 AT3G13610.1
AT3G13610
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_20427749 0.95 AT5G50175.1
AT5G50175
transmembrane protein
Chr5_-_2090430 0.92 AT5G06760.1
LEA4-5
Late Embryogenesis Abundant 4-5
Chr3_+_1593182 0.92 AT3G05500.1
AT3G05500
Rubber elongation factor protein (REF)
Chr1_+_16263805 0.92 AT1G43160.1
RAP2.6
related to AP2 6
Chr5_+_20644525 0.90 AT5G50760.1
AT5G50760
SAUR-like auxin-responsive protein family
Chr5_+_332330 0.89 AT5G01850.2
AT5G01850.1
AT5G01850
Protein kinase superfamily protein
Chr4_+_10521259 0.86 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
Chr4_-_18472048 0.86 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr2_-_16804823 0.84 AT2G40230.1
AT2G40230
HXXXD-type acyl-transferase family protein
Chr4_+_13275200 0.83 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr2_+_539898 0.82 AT2G02130.1
LCR68
low-molecular-weight cysteine-rich 68
Chr1_+_22198266 0.82 AT1G60190.1
PUB19
ARM repeat superfamily protein
Chr2_-_16690182 0.81 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr1_-_24433165 0.81 AT1G65690.1
AT1G65690
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr4_-_12533924 0.80 AT4G24140.1
AT4G24140
alpha/beta-Hydrolases superfamily protein
Chr4_-_15022445 0.79 AT4G30850.2
AT4G30850.1
HHP2
heptahelical transmembrane protein2
Chr1_+_28291698 0.78 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
Chr4_-_9250343 0.77 AT4G16370.1
OPT3
oligopeptide transporter
Chr2_-_9569784 0.75 AT2G22510.1
AT2G22510
hydroxyproline-rich glycoprotein family protein
Chr5_+_25064793 0.75 AT5G62420.1
AT5G62420
NAD(P)-linked oxidoreductase superfamily protein
Chr2_-_14592140 0.74 AT2G34650.1
PID
Protein kinase superfamily protein
Chr5_-_26129547 0.74 AT5G65390.1
AGP7
arabinogalactan protein 7
Chr5_-_6725966 0.74 AT5G19890.1
AT5G19890
Peroxidase superfamily protein
Chr2_+_18727504 0.74 AT2G45430.1
AHL22
AT-hook motif nuclear-localized protein 22
Chr2_+_11773187 0.74 AT2G27550.1
ATC
centroradiali
Chr3_-_4496800 0.74 AT3G13720.1
PRA8
PRA1 (Prenylated rab acceptor) family protein
Chr2_+_18537177 0.73 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
Chr5_-_4483247 0.73 AT5G13910.1
LEP
Integrase-type DNA-binding superfamily protein
Chr2_-_12343443 0.73 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
Chr1_-_8189220 0.73 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
AST91
sulfate transporter 91
Chr5_+_8148544 0.72 AT5G24100.1
AT5G24100
Leucine-rich repeat protein kinase family protein
Chr3_+_512220 0.72 AT3G02480.1
AT3G02480
Late embryogenesis abundant protein (LEA) family protein
Chr5_+_21771811 0.71 AT5G53590.1
AT5G53590
SAUR-like auxin-responsive protein family
Chr5_-_21483722 0.70 AT5G52980.2
AT5G52980.1
AT5G52980
ER-based factor for assembly of V-ATPase
Chr3_+_6840281 0.69 AT3G19680.1
AT3G19680
hypothetical protein (DUF1005)
Chr2_+_10244745 0.68 AT2G24100.1
ASG1
ATP-dependent DNA helicase
Chr1_+_18346958 0.68 AT1G49570.1
AT1G49570
Peroxidase superfamily protein
Chr4_-_11023736 0.68 AT4G20440.4
AT4G20440.5
AT4G20440.3
AT4G20440.2
AT4G20440.1
smB
small nuclear ribonucleoprotein associated protein B
Chr3_-_4075073 0.67 AT3G12820.2
MYB10
myb domain protein 10
Chr1_-_1637914 0.67 AT1G05530.1
UGT75B2
UDP-glucosyl transferase 75B2
Chr1_+_21136835 0.67 AT1G56430.1
NAS4
nicotianamine synthase 4
Chr1_+_27628678 0.66 AT1G73480.1
AT1G73480
alpha/beta-Hydrolases superfamily protein
Chr5_+_5092140 0.66 AT5G15650.1
RGP2
reversibly glycosylated polypeptide 2
Chr4_-_13123354 0.66 AT4G25790.1
AT4G25790
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr5_-_23700226 0.65 AT5G58650.1
PSY1
plant peptide containing sulfated tyrosine 1
Chr1_+_27092893 0.65 AT1G71970.1
AT1G71970
hypothetical protein
Chr2_-_16908152 0.64 AT2G40475.1
ASG8
hypothetical protein
Chr2_-_15955752 0.63 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
Chr5_-_1742161 0.63 AT5G05790.2
AT5G05790.1
AT5G05790
Duplicated homeodomain-like superfamily protein
Chr3_+_6119707 0.62 AT3G17860.4
AT3G17860.1
JAZ3
jasmonate-zim-domain protein 3
Chr3_-_4358826 0.62 AT3G13403.1
AT3G13403
Defensin-like (DEFL) family protein
Chr4_+_16614204 0.61 AT4G34870.1
ROC5
rotamase cyclophilin 5
Chr5_+_17451488 0.61 AT5G43420.1
AT5G43420
RING/U-box superfamily protein
Chr3_-_20903080 0.61 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
Chr1_-_172948 0.60 AT1G01470.1
LEA14
Late embryogenesis abundant protein
Chr3_-_2334185 0.60 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr3_+_6120029 0.60 AT3G17860.3
AT3G17860.2
JAZ3
jasmonate-zim-domain protein 3
Chr3_+_5234457 0.60 AT3G15500.1
NAC3
NAC domain containing protein 3
Chr4_+_12376122 0.58 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
Chr5_-_6976036 0.58 AT5G20630.1
GER3
germin 3
Chr4_+_18576216 0.58 AT4G40070.1
AT4G40070
RING/U-box superfamily protein
Chr4_+_17691687 0.58 AT4G37650.1
SHR
GRAS family transcription factor
Chr5_+_26281642 0.57 AT5G65700.1
AT5G65700.2
BAM1
Leucine-rich receptor-like protein kinase family protein
Chr5_-_19735489 0.57 AT5G48657.6
AT5G48657.5
AT5G48657.1
AT5G48657
defense protein-like protein
Chr5_-_26501955 0.57 AT5G66330.1
AT5G66330
Leucine-rich repeat (LRR) family protein
Chr5_-_19735669 0.56 AT5G48657.3
AT5G48657.2
AT5G48657.4
AT5G48657
defense protein-like protein
Chr3_+_5187082 0.56 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
Chr4_+_596397 0.56 AT4G01440.3
AT4G01440.2
AT4G01440.1
AT4G01440.4
UMAMIT31
nodulin MtN21 /EamA-like transporter family protein
Chr4_+_9349741 0.56 AT4G16600.1
PGSIP8
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_+_8720309 0.56 AT1G24600.1
AT1G24600
hypothetical protein
Chr5_+_26671273 0.56 AT5G66800.1
AT5G66800
membrane-associated kinase regulator-like protein
Chr4_+_7210807 0.56 AT4G12030.4
AT4G12030.3
AT4G12030.2
AT4G12030.1
BAT5
bile acid transporter 5
Chr1_+_3449567 0.55 AT1G10480.1
ZFP5
zinc finger protein 5
Chr5_+_2167468 0.55 AT5G06980.4
AT5G06980.3
AT5G06980.5
AT5G06980.2
AT5G06980
hypothetical protein
Chr2_+_13107583 0.55 AT2G30766.1
AT2G30766
hypothetical protein
Chr1_-_6754073 0.54 AT1G19490.1
AT1G19490
Basic-leucine zipper (bZIP) transcription factor family protein
Chr3_-_22412663 0.54 AT3G60630.1
HAM2
GRAS family transcription factor
Chr5_+_18345534 0.54 AT5G45280.2
AT5G45280.1
AT5G45280
Pectinacetylesterase family protein
Chr2_+_13107909 0.54 AT2G30766.2
AT2G30766
hypothetical protein
Chr2_+_6761635 0.53 AT2G15490.2
AT2G15490.3
AT2G15490.1
UGT73B4
UDP-glycosyltransferase 73B4
Chr3_+_5121303 0.53 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr3_-_9148525 0.52 AT3G25110.1
FaTA
fatA acyl-ACP thioesterase
Chr4_-_13069762 0.52 AT4G25620.1
AT4G25620
hydroxyproline-rich glycoprotein family protein
Chr5_+_5509625 0.52 AT5G16760.1
ITPK1
Inositol 1,3,4-trisphosphate 5/6-kinase family protein
Chr5_+_2167120 0.52 AT5G06980.1
AT5G06980
hypothetical protein
Chr1_+_2126670 0.52 AT1G06923.1
AT1G06923
transcription repressor OFP17-like protein
Chr1_+_3243986 0.52 AT1G09960.1
SUT4
sucrose transporter 4
Chr2_+_17490271 0.52 AT2G41900.1
OXS2
CCCH-type zinc finger protein with ARM repeat domain-containing protein
Chr3_+_18029659 0.51 AT3G48660.1
AT3G48660
transmembrane protein, putative (DUF 3339)
Chr4_-_17530589 0.51 AT4G37250.1
AT4G37250
Leucine-rich repeat protein kinase family protein
Chr3_-_21312378 0.51 AT3G57560.1
NAGK
N-acetyl-l-glutamate kinase
Chr5_+_26743279 0.50 AT5G66985.1
AT5G66985
hypothetical protein
Chr4_+_18519599 0.50 AT4G39940.1
AKN2
APS-kinase 2
Chr1_+_19488755 0.50 AT1G52330.1
AT1G52330.2
AT1G52330
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_+_5574257 0.50 AT1G16300.1
GAPCP-2
glyceraldehyde-3-phosphate dehydrogenase of plastid 2
Chr1_+_9951762 0.50 AT1G28360.1
ERF12
ERF domain protein 12
Chr1_+_564018 0.50 AT1G02640.1
BXL2
beta-xylosidase 2
Chr2_-_12355480 0.50 AT2G28790.1
AT2G28790.2
AT2G28790
Pathogenesis-related thaumatin superfamily protein
Chr5_-_25335549 0.50 AT5G63160.3
AT5G63160.1
AT5G63160.2
BT1
BTB and TAZ domain protein 1
Chr4_-_17041131 0.50 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr5_-_1078304 0.50 AT5G03995.1
AT5G03995
hypothetical protein
Chr2_-_16846194 0.49 AT2G40330.1
PYL6
PYR1-like 6
Chr1_-_2305031 0.49 AT1G07500.1
AT1G07500
hypothetical protein
Chr3_+_2622849 0.49 AT3G08640.1
AT3G08640
alphavirus core family protein (DUF3411)
Chr3_-_18817405 0.49 AT3G50660.1
AT3G50660.2
DWF4
Cytochrome P450 superfamily protein
Chr4_+_10142255 0.49 AT4G18350.1
NCED2
nine-cis-epoxycarotenoid dioxygenase 2
Chr5_+_21220031 0.49 AT5G52260.1
MYB19
myb domain protein 19
Chr4_-_17041326 0.49 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr3_-_4075643 0.49 AT3G12820.1
MYB10
myb domain protein 10
Chr1_+_9668508 0.49 AT1G27760.3
AT1G27760.1
AT1G27760.2
SAT32
interferon-related developmental regulator family protein / IFRD protein family
Chr2_+_19574666 0.48 AT2G47800.1
ABCC4
multidrug resistance-associated protein 4
Chr5_+_4956314 0.48 AT5G15265.1
AT5G15265.2
AT5G15265
transmembrane protein
Chr1_+_26038905 0.48 AT1G69260.1
AFP1
ABI five binding protein
Chr2_+_9488413 0.48 AT2G22330.2
AT2G22330.1
CYP79B3
cytochrome P450, family 79, subfamily B, polypeptide 3
Chr1_+_29387672 0.48 AT1G78100.1
AUF1
F-box family protein
Chr3_+_23345754 0.48 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr5_+_4156501 0.47 AT5G13100.1
AT5G13100
Gap junction beta-4 protein
Chr1_-_16800307 0.47 AT1G44170.2
AT1G44170.1
ALDH3H1
aldehyde dehydrogenase 3H1
Chr3_+_8078789 0.47 AT3G22830.1
HSFA6B
heat shock transcription factor A6B
Chr5_-_26366002 0.47 AT5G65920.2
AT5G65920.1
AT5G65920
ARM repeat superfamily protein
Chr2_-_18020879 0.47 AT2G43390.1
AT2G43390
hypothetical protein
Chr3_-_790693 0.47 AT3G03341.1
AT3G03341
cold-regulated protein
Chr1_-_29965758 0.47 AT1G79630.2
AT1G79630.1
AT1G79630.7
AT1G79630.5
AT1G79630.4
AT1G79630.8
AT1G79630.3
AT1G79630.6
AT1G79630
Protein phosphatase 2C family protein
Chr4_+_597187 0.46 AT4G01440.5
UMAMIT31
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_5298991 0.46 AT3G15640.1
AT3G15640.2
AT3G15640
Rubredoxin-like superfamily protein
Chr5_-_18021508 0.46 AT5G44670.1
GALS2
glycosyltransferase family protein (DUF23)
Chr1_+_1104493 0.46 AT1G04180.1
YUC9
YUCCA 9
Chr1_-_25727701 0.46 AT1G68550.1
CRF10
Integrase-type DNA-binding superfamily protein
Chr4_+_16130593 0.45 AT4G33540.1
AT4G33540.2
AT4G33540
metallo-beta-lactamase family protein
Chr3_+_4403355 0.45 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
Chr2_-_12228543 0.45 AT2G28550.6
AT2G28550.5
AT2G28550.4
AT2G28550.3
AT2G28550.1
AT2G28550.2
RAP2.7
related to AP2.7
Chr5_+_309374 0.45 AT5G01810.1
AT5G01810.2
AT5G01810.3
CIPK15
CBL-interacting protein kinase 15
Chr4_+_8231002 0.45 AT4G14300.2
AT4G14300.1
AT4G14300
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_25727386 0.45 AT1G68550.2
CRF10
Integrase-type DNA-binding superfamily protein
Chr1_-_10690838 0.45 AT1G30330.2
AT1G30330.1
AT1G30330.3
ARF6
auxin response factor 6
Chr1_-_4642088 0.45 AT1G13560.2
AT1G13560.1
AAPT1
aminoalcoholphosphotransferase 1
Chr2_+_18582697 0.45 AT2G45050.1
GATA2
GATA transcription factor 2
Chr3_-_4123582 0.45 AT3G12920.1
BRG3
SBP (S-ribonuclease binding protein) family protein
Chr3_-_20418910 0.44 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr3_+_4889063 0.44 AT3G14560.1
AT3G14560
hypothetical protein
Chr1_-_27035182 0.44 AT1G71870.1
AT1G71870
MATE efflux family protein
Chr1_-_11595982 0.44 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
Chr3_+_22786022 0.44 AT3G61580.1
SLD1
Fatty acid/sphingolipid desaturase
Chr1_-_28396677 0.43 AT1G75620.1
AT1G75620
glyoxal oxidase-related protein
Chr3_-_1268350 0.43 AT3G04670.2
AT3G04670.1
WRKY39
WRKY DNA-binding protein 39
Chr4_-_834340 0.43 AT4G01925.1
AT4G01925
Cysteine/Histidine-rich C1 domain family protein
Chr3_-_20366840 0.43 AT3G54960.2
AT3G54960.1
PDIL1-3
PDI-like 1-3
Chr1_+_218834 0.43 AT1G01600.1
CYP86A4
cytochrome P450, family 86, subfamily A, polypeptide 4
Chr2_-_18519731 0.43 AT2G44910.1
HB4
homeobox-leucine zipper protein 4
Chr1_-_13456336 0.43 AT1G36060.1
AT1G36060
Integrase-type DNA-binding superfamily protein
Chr5_+_8880863 0.42 AT5G25500.1
AT5G25500
exosome complex exonuclease
Chr4_+_14847583 0.42 AT4G30350.1
AT4G30350
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Chr3_-_9464676 0.42 AT3G25870.1
AT3G25870
hypothetical protein
Chr5_+_8037798 0.42 AT5G23850.1
AT5G23850
O-glucosyltransferase rumi-like protein (DUF821)
Chr3_-_21434648 0.42 AT3G57880.1
AT3G57880.3
AT3G57880.4
AT3G57880
Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
Chr4_+_16131373 0.42 AT4G33540.3
AT4G33540
metallo-beta-lactamase family protein
Chr3_+_6722825 0.41 AT3G19390.1
AT3G19390
Granulin repeat cysteine protease family protein
Chr1_-_29034822 0.41 AT1G77280.2
AT1G77280.1
AT1G77280
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Chr3_-_7286442 0.41 AT3G20830.1
UCNL
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr1_-_4641458 0.41 AT1G13560.3
AAPT1
aminoalcoholphosphotransferase 1
Chr3_+_21893812 0.41 AT3G59220.1
PRN
pirin
Chr5_-_7026753 0.41 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr4_-_9302022 0.41 AT4G16500.2
AT4G16500
Cystatin/monellin superfamily protein
Chr5_+_1804697 0.41 AT5G05987.1
PRA1.A2
prenylated RAB acceptor 1.A2
Chr1_-_29305411 0.41 AT1G77940.1
AT1G77940
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G45300

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.5 GO:1990532 stress response to nickel ion(GO:1990532)
0.4 1.8 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.3 1.3 GO:0010507 negative regulation of autophagy(GO:0010507)
0.3 1.3 GO:0015675 nickel cation transport(GO:0015675)
0.3 0.9 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 0.8 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.3 0.3 GO:0043181 vacuolar sequestering(GO:0043181)
0.2 1.2 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.2 1.2 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.2 1.3 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.2 0.7 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.2 0.7 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.2 0.5 GO:0010541 acropetal auxin transport(GO:0010541)
0.2 0.5 GO:0010434 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.7 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.6 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.5 GO:0019474 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 1.0 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.1 0.5 GO:0052746 inositol phosphorylation(GO:0052746)
0.1 0.5 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.1 0.6 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.4 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.1 3.1 GO:0055072 iron ion homeostasis(GO:0055072)
0.1 0.7 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.1 0.2 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.1 0.5 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 0.9 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 0.6 GO:0019079 viral genome replication(GO:0019079)
0.1 1.3 GO:0048766 root hair initiation(GO:0048766)
0.1 0.2 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.2 GO:0042660 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.1 0.3 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.4 GO:0010135 ureide metabolic process(GO:0010135) ureide catabolic process(GO:0010136)
0.1 0.4 GO:0048455 stamen formation(GO:0048455)
0.1 0.3 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.1 0.3 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.1 0.2 GO:0043470 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.1 0.2 GO:0019320 hexose catabolic process(GO:0019320)
0.1 1.2 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 0.3 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.1 0.3 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.2 GO:0017145 stem cell division(GO:0017145)
0.1 0.3 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.2 GO:0006474 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 1.0 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 0.5 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.2 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.4 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.4 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.2 GO:0080171 lytic vacuole organization(GO:0080171)
0.1 0.2 GO:0070509 calcium ion import(GO:0070509)
0.1 0.4 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 1.1 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.1 0.8 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.1 0.7 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.2 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.2 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.1 0.3 GO:0080121 AMP transport(GO:0080121)
0.1 0.4 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.2 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 0.2 GO:0090309 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.0 0.1 GO:0036292 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.0 0.5 GO:0010358 leaf shaping(GO:0010358)
0.0 1.2 GO:0008361 regulation of cell size(GO:0008361)
0.0 0.2 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.3 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 0.5 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.0 0.5 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.4 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.1 GO:0010113 defense response to nematode(GO:0002215) negative regulation of systemic acquired resistance(GO:0010113)
0.0 0.1 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.0 0.2 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.0 0.1 GO:0010351 lithium ion transport(GO:0010351) cellular manganese ion homeostasis(GO:0030026)
0.0 0.2 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.4 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.1 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.0 0.2 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.0 0.1 GO:0006527 arginine catabolic process(GO:0006527)
0.0 0.1 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.0 0.5 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.5 GO:1902074 response to salt(GO:1902074)
0.0 0.9 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.2 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.1 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.0 0.3 GO:0007130 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.0 2.0 GO:0009631 cold acclimation(GO:0009631)
0.0 0.4 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.6 GO:0015770 sucrose transport(GO:0015770)
0.0 0.3 GO:0030834 regulation of actin filament depolymerization(GO:0030834)
0.0 0.3 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.7 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.7 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 0.1 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.0 0.3 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 0.2 GO:0046085 adenosine metabolic process(GO:0046085)
0.0 0.4 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.7 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.5 GO:0009269 response to desiccation(GO:0009269)
0.0 0.6 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.3 GO:0030497 fatty acid elongation(GO:0030497)
0.0 0.1 GO:1901562 response to paraquat(GO:1901562)
0.0 0.5 GO:0019915 lipid storage(GO:0019915)
0.0 0.8 GO:0043450 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.1 GO:0010071 root meristem specification(GO:0010071)
0.0 0.2 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.2 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.2 GO:0030104 water homeostasis(GO:0030104)
0.0 0.3 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.2 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.1 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.0 1.1 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.4 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.6 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 0.7 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 1.7 GO:0010029 regulation of seed germination(GO:0010029)
0.0 0.3 GO:0007135 meiosis II(GO:0007135)
0.0 0.3 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.2 GO:1903340 positive regulation of secondary cell wall biogenesis(GO:1901348) positive regulation of cell wall organization or biogenesis(GO:1903340)
0.0 0.3 GO:0010229 inflorescence development(GO:0010229)
0.0 0.1 GO:0071491 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.0 0.1 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.1 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.0 1.1 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.2 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.1 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000479)
0.0 0.0 GO:0031054 pre-miRNA processing(GO:0031054)
0.0 0.1 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 1.0 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.3 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 0.2 GO:0098781 ncRNA transcription(GO:0098781)
0.0 0.1 GO:0090059 protoxylem development(GO:0090059)
0.0 0.5 GO:0009851 auxin biosynthetic process(GO:0009851)
0.0 0.2 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.2 GO:0010152 pollen maturation(GO:0010152)
0.0 0.2 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.0 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.0 0.2 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.2 GO:0034765 regulation of ion transmembrane transport(GO:0034765)
0.0 0.0 GO:0010677 mitochondrial RNA 3'-end processing(GO:0000965) regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322) negative regulation of cellular carbohydrate metabolic process(GO:0010677) negative regulation of isoprenoid metabolic process(GO:0045827)
0.0 0.9 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.0 0.0 GO:0010185 regulation of cellular defense response(GO:0010185)
0.0 0.0 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.0 0.3 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.1 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.0 GO:0040014 regulation of multicellular organism growth(GO:0040014) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.0 0.3 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.1 GO:0015985 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0005687 U4 snRNP(GO:0005687)
0.1 0.3 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.1 0.2 GO:0031417 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.1 0.3 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.1 0.5 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.2 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.0 0.2 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.0 0.5 GO:0045298 tubulin complex(GO:0045298)
0.0 0.7 GO:0009986 cell surface(GO:0009986)
0.0 0.5 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0 0.5 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.0 0.2 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.7 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.1 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 0.3 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.2 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.2 GO:0030139 endocytic vesicle(GO:0030139)
0.0 0.4 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 6.5 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.2 GO:0010369 chromocenter(GO:0010369)
0.0 0.1 GO:0000798 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 0.4 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.1 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.6 GO:0005764 lysosome(GO:0005764)
0.0 0.2 GO:0010168 ER body(GO:0010168)
0.0 0.3 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.3 GO:0045177 apical part of cell(GO:0045177)
0.0 0.2 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.1 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 1.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.1 GO:0030688 preribosome, small subunit precursor(GO:0030688)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.3 1.6 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 1.2 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.2 1.8 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 0.7 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.2 0.9 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.2 0.9 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.2 1.0 GO:0003680 AT DNA binding(GO:0003680)
0.2 2.3 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.2 0.8 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 0.5 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.2 0.7 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215)
0.2 0.7 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.2 0.8 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.2 0.5 GO:0008517 folic acid transporter activity(GO:0008517)
0.2 0.8 GO:0016676 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 0.4 GO:0001054 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.1 0.6 GO:0050162 oxalate oxidase activity(GO:0050162)
0.1 0.5 GO:0016748 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 0.4 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.1 0.5 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.3 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.1 0.3 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.4 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.1 0.3 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1 1.0 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 1.0 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.6 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 1.3 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.1 0.3 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.6 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 0.3 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.1 0.2 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 0.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.5 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.1 0.3 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 0.8 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.1 0.3 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 0.4 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.3 GO:0004594 pantothenate kinase activity(GO:0004594)
0.1 0.9 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.2 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 0.3 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 0.3 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.3 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.7 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.3 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.1 0.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.5 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.4 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.2 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 1.4 GO:0048029 monosaccharide binding(GO:0048029)
0.0 0.4 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.1 GO:0036310 annealing helicase activity(GO:0036310)
0.0 0.5 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 1.2 GO:0004568 chitinase activity(GO:0004568)
0.0 0.5 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.2 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.0 0.3 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.5 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.4 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.5 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.0 0.5 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.5 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.3 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.3 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.2 GO:0005221 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.2 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0004834 tryptophan synthase activity(GO:0004834)
0.0 0.3 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.3 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.4 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.1 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.0 0.2 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.7 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.2 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.2 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 1.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.1 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.6 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.4 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 0.4 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.3 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.6 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 0.1 GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity(GO:0051748)
0.0 0.4 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.3 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.0 0.4 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.3 GO:0016780 phosphotransferase activity, for other substituted phosphate groups(GO:0016780)
0.0 0.1 GO:0004471 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.0 0.1 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.3 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.0 0.4 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.1 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.0 0.2 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.0 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.7 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.0 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.1 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.1 GO:0019137 thioglucosidase activity(GO:0019137)
0.0 0.4 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.0 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.0 0.2 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.3 GO:0008810 cellulase activity(GO:0008810)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.1 0.4 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.1 0.4 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.1 0.4 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.4 PID P73PATHWAY p73 transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.1 0.4 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.3 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.1 1.0 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.3 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.4 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.0 0.2 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.2 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System