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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G44210

Z-value: 0.18

Transcription factors associated with AT5G44210

Gene Symbol Gene ID Gene Info
AT5G44210
AT5G44210 erf domain protein 9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF9arTal_v1_Chr5_+_17806397_178063970.612.0e-02Click!

Activity profile of AT5G44210 motif

Sorted Z-values of AT5G44210 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_5741500 0.18 AT5G17420.1
IRX3
Cellulose synthase family protein
Chr2_-_15589369 0.15 AT2G37090.1
IRX9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr2_-_12996012 0.12 AT2G30490.1
C4H
cinnamate-4-hydroxylase
Chr1_+_3111694 0.11 AT1G09610.1
GXM3
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr5_+_17714390 0.10 AT5G44030.2
AT5G44030.1
CESA4
cellulose synthase A4
Chr5_+_5084524 0.10 AT5G15630.1
AT5G15630.2
AT5G15630.3
AT5G15630.4
AT5G15630.5
IRX6
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Chr5_+_17715687 0.06 AT5G44030.3
CESA4
cellulose synthase A4
Chr3_+_3203988 0.06 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
Chr1_+_22836327 0.01 AT1G61820.3
BGLU46
beta glucosidase 46
Chr3_-_2578276 0.00 AT3G08500.1
MYB83
myb domain protein 83
Chr1_+_6177481 0.00 AT1G17950.1
MYB52
myb domain protein 52

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G44210

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.0 0.1 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0010330 cellulose synthase complex(GO:0010330)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.0 0.1 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.0 0.3 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)