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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G19790

Z-value: 1.18

Transcription factors associated with AT5G19790

Gene Symbol Gene ID Gene Info
AT5G19790
AT5G19790 related to AP2 11

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
RAP2.11arTal_v1_Chr5_-_6690040_6690040-0.058.7e-01Click!

Activity profile of AT5G19790 motif

Sorted Z-values of AT5G19790 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_7421828 1.62 AT4G12520.1
AT4G12520
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_4104463 1.52 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_4370692 1.52 AT5G13580.1
ABCG6
ABC-2 type transporter family protein
Chr3_-_21097481 1.43 AT3G57010.1
AT3G57010
Calcium-dependent phosphotriesterase superfamily protein
Chr4_-_15954803 1.26 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr3_-_7656053 1.24 AT3G21720.1
ICL
isocitrate lyase
Chr5_-_2090430 1.23 AT5G06760.1
LEA4-5
Late Embryogenesis Abundant 4-5
Chr5_+_1461786 1.18 AT5G04960.1
AT5G04960
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_3595694 1.14 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
Chr1_+_3019639 1.13 AT1G09350.1
GolS3
galactinol synthase 3
Chr4_-_13022996 1.10 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
Chr2_-_19352088 1.10 AT2G47140.1
SDR5
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_18821889 1.10 AT2G45680.1
TCP9
TCP family transcription factor
Chr3_-_4834015 1.08 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
Chr1_+_3020221 1.05 AT1G09350.2
GolS3
galactinol synthase 3
Chr4_-_17979740 1.04 AT4G38400.1
AT4G38401.1
EXLA2
AT4G38401
expansin-like A2
hypothetical protein
Chr1_+_2097106 1.03 AT1G06830.1
AT1G06830
Glutaredoxin family protein
Chr1_-_11222789 1.01 AT1G31350.1
AT1G31350.2
KUF1
KAR-UP F-box 1
Chr1_-_3880391 1.00 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr3_-_8589754 0.95 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr3_-_21087710 0.92 AT3G56980.1
bHLH39
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_22808641 0.92 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr1_+_954290 0.92 AT1G03790.1
SOM
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_+_13987669 0.91 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
Chr5_+_22388782 0.91 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr4_-_16644928 0.89 AT4G34950.1
AT4G34950
Major facilitator superfamily protein
Chr5_+_15543115 0.88 AT5G38820.1
AT5G38820.2
AT5G38820
Transmembrane amino acid transporter family protein
Chr5_+_22388521 0.86 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr1_-_5645443 0.86 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr3_-_565801 0.86 AT3G02640.1
AT3G02640
transmembrane protein
Chr2_+_9592956 0.85 AT2G22590.1
AT2G22590
UDP-Glycosyltransferase superfamily protein
Chr4_-_7401951 0.85 AT4G12470.1
AZI1
azelaic acid induced 1
Chr4_-_13752103 0.84 AT4G27520.1
ENODL2
early nodulin-like protein 2
Chr1_+_4105223 0.82 AT1G12110.1
NRT1.1
nitrate transporter 1.1
Chr5_+_25721733 0.80 AT5G64310.1
AGP1
arabinogalactan protein 1
Chr5_+_16161449 0.79 AT5G40390.1
SIP1
Raffinose synthase family protein
Chr1_+_27681358 0.79 AT1G73620.1
AT1G73620
Pathogenesis-related thaumatin superfamily protein
Chr3_-_6980523 0.78 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr3_+_20354351 0.76 AT3G54940.3
AT3G54940.2
AT3G54940
Papain family cysteine protease
Chr2_-_14592140 0.76 AT2G34650.1
PID
Protein kinase superfamily protein
Chr4_-_7493080 0.76 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr4_-_18098633 0.76 AT4G38770.1
PRP4
proline-rich protein 4
Chr1_-_983544 0.76 AT1G03870.1
FLA9
FASCICLIN-like arabinoogalactan 9
Chr1_-_8961183 0.75 AT1G25510.1
AT1G25510
Eukaryotic aspartyl protease family protein
Chr1_+_26938369 0.75 AT1G71520.1
AT1G71520
Integrase-type DNA-binding superfamily protein
Chr5_-_19974530 0.75 AT5G49270.1
SHV2
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Chr2_-_15790139 0.75 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr5_+_23100516 0.74 AT5G57090.1
AT5G57090.2
EIR1
Auxin efflux carrier family protein
Chr4_-_9844290 0.74 AT4G17680.3
AT4G17680.2
AT4G17680.1
AT4G17680
SBP (S-ribonuclease binding protein) family protein
Chr5_-_25646845 0.74 AT5G64080.2
AT5G64080.1
XYP1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_8277406 0.73 AT5G24313.1
AT5G24313
transmembrane protein
Chr3_+_9208861 0.73 AT3G25290.1
AT3G25290.2
AT3G25290
Auxin-responsive family protein
Chr4_-_17041131 0.73 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr4_-_17041326 0.72 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr1_-_24023424 0.71 AT1G64640.1
ENODL8
early nodulin-like protein 8
Chr2_+_2763449 0.71 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr3_+_5535124 0.71 AT3G16330.1
AT3G16330
Avr9/Cf-9 rapidly elicited protein
Chr3_-_17008528 0.71 AT3G46280.1
AT3G46280
kinase-like protein
Chr2_+_6893949 0.70 AT2G15830.1
AT2G15830
hypothetical protein
Chr1_+_26814260 0.70 AT1G71100.1
RSW10
Ribose 5-phosphate isomerase, type A protein
Chr3_+_3203988 0.70 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
Chr5_+_2560328 0.70 AT5G07990.1
TT7
Cytochrome P450 superfamily protein
Chr5_-_8136150 0.70 AT5G24070.1
AT5G24070
Peroxidase superfamily protein
Chr1_-_17266724 0.70 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
Chr3_-_2376960 0.69 AT3G07420.2
AT3G07420.1
NS2
asparaginyl-tRNA synthetase 2
Chr2_-_15789605 0.69 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr4_+_160643 0.69 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr5_+_25703649 0.69 AT5G64260.1
EXL2
EXORDIUM like 2
Chr3_+_1591115 0.68 AT3G05490.1
RALFL22
ralf-like 22
Chr1_-_23460884 0.68 AT1G63245.1
CLE14
CLAVATA3/ESR-RELATED 14
Chr3_-_15617149 0.67 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_22280691 0.67 AT3G60280.1
UCC3
uclacyanin 3
Chr4_-_13460105 0.66 AT4G26690.1
SHV3
PLC-like phosphodiesterase family protein
Chr5_+_15543481 0.66 AT5G38820.3
AT5G38820
Transmembrane amino acid transporter family protein
Chr4_-_8307934 0.66 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr3_+_5121303 0.66 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr3_+_5187082 0.66 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
Chr2_-_19650287 0.65 AT2G48030.1
AT2G48030.2
AT2G48030
DNAse I-like superfamily protein
Chr1_-_28551836 0.65 AT1G76090.1
SMT3
sterol methyltransferase 3
Chr3_-_20418910 0.64 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr5_-_23700226 0.64 AT5G58650.1
PSY1
plant peptide containing sulfated tyrosine 1
Chr3_-_2334185 0.64 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr1_-_25580194 0.64 AT1G68250.2
AT1G68250.1
AT1G68250
hypothetical protein
Chr2_+_19686333 0.64 AT2G48140.1
AT2G48140.2
EDA4
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_4826141 0.64 AT5G14920.1
AT5G14920.2
AT5G14920
Gibberellin-regulated family protein
Chr3_-_15617309 0.63 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_18537177 0.63 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
Chr3_+_16163709 0.63 AT3G44590.1
AT3G44590.2
AT3G44590
60S acidic ribosomal protein family
Chr5_-_6234251 0.62 AT5G18690.1
AGP25
arabinogalactan protein 25
Chr4_-_14883583 0.62 AT4G30440.1
GAE1
UDP-D-glucuronate 4-epimerase 1
Chr2_+_15445294 0.62 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr1_+_618061 0.62 AT1G02810.1
AT1G02810
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_+_18466519 0.61 AT4G39795.1
AT4G39795
hypothetical protein (DUF581)
Chr5_+_198906 0.60 AT5G01500.1
TAAC
thylakoid ATP/ADP carrier
Chr1_+_486800 0.60 AT1G02400.1
AT1G02400.2
GA2OX6
gibberellin 2-oxidase 6
Chr1_+_23730106 0.60 AT1G63940.4
AT1G63940.3
MDAR6
monodehydroascorbate reductase 6
Chr5_-_26728715 0.60 AT5G66940.1
AT5G66940
Dof-type zinc finger DNA-binding family protein
Chr1_+_23729875 0.60 AT1G63940.2
AT1G63940.1
MDAR6
monodehydroascorbate reductase 6
Chr5_-_1034686 0.60 AT5G03860.1
MLS
malate synthase
Chr3_-_4620305 0.60 AT3G13980.1
AT3G13980
SKI/DACH domain protein
Chr3_-_6762754 0.59 AT3G19508.1
AT3G19508
complex 1 protein, LYR family protein
Chr4_-_13692832 0.59 AT4G27350.1
AT4G27350
membrane lipoprotein lipid attachment site-like protein, putative (DUF1223)
Chr3_-_868706 0.57 AT3G03600.1
RPS2
ribosomal protein S2
Chr1_+_17766738 0.57 AT1G48100.1
AT1G48100
Pectin lyase-like superfamily protein
Chr4_+_11758578 0.57 AT4G22217.1
AT4G22217
defensin-like protein
Chr1_+_27659673 0.57 AT1G73590.1
PIN1
Auxin efflux carrier family protein
Chr2_-_19667192 0.57 AT2G48080.1
AT2G48080
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Chr5_-_17831336 0.57 AT5G44260.1
AT5G44260
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_+_8426117 0.57 AT2G19450.1
TAG1
membrane bound O-acyl transferase (MBOAT) family protein
Chr3_-_21797006 0.57 AT3G58980.1
AT3G58980
F-box family protein
Chr4_-_947075 0.56 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr4_-_16376666 0.56 AT4G34200.1
EDA9
D-3-phosphoglycerate dehydrogenase
Chr2_-_7990586 0.56 AT2G18400.1
AT2G18400
ribosomal protein L6 family protein
Chr5_-_1467161 0.56 AT5G04970.1
AT5G04970
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_12355480 0.56 AT2G28790.1
AT2G28790.2
AT2G28790
Pathogenesis-related thaumatin superfamily protein
Chr5_+_15742543 0.56 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
Chr2_-_19512728 0.56 AT2G47560.1
AT2G47560
RING/U-box superfamily protein
Chr1_+_10985063 0.56 AT1G30850.1
RSH4
root hair specific 4
Chr5_-_1034973 0.56 AT5G03860.2
MLS
malate synthase
Chr3_-_4075073 0.56 AT3G12820.2
MYB10
myb domain protein 10
Chr2_-_18463533 0.55 AT2G44790.1
UCC2
uclacyanin 2
Chr4_+_15098041 0.55 AT4G30993.2
AT4G30993.1
AT4G30993.3
AT4G30993
Calcineurin-like metallo-phosphoesterase superfamily protein
Chr5_+_8037798 0.55 AT5G23850.1
AT5G23850
O-glucosyltransferase rumi-like protein (DUF821)
Chr5_+_19428888 0.55 AT5G47980.1
AT5G47980
HXXXD-type acyl-transferase family protein
Chr4_+_12649985 0.55 AT4G24480.2
AT4G24480.1
AT4G24480.3
AT4G24480
Protein kinase superfamily protein
Chr5_-_25967393 0.54 AT5G65000.2
AT5G65000.1
AT5G65000
Nucleotide-sugar transporter family protein
Chr1_-_27498062 0.54 AT1G73120.1
AT1G73120
F-box/RNI superfamily protein
Chr2_-_8518194 0.54 AT2G19760.1
PRF1
profilin 1
Chr1_+_7366775 0.53 AT1G21050.1
AT1G21050
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr1_+_7366590 0.53 AT1G21050.2
AT1G21050
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr2_-_16690182 0.53 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr1_-_30129649 0.53 AT1G80080.1
TMM
Leucine-rich repeat (LRR) family protein
Chr4_-_2517217 0.53 AT4G04940.1
AT4G04940
transducin family protein / WD-40 repeat family protein
Chr1_+_27815627 0.52 AT1G73965.1
CLE13
CLAVATA3/ESR-RELATED 13
Chr1_-_6101983 0.52 AT1G17744.1
AT1G17744
hypothetical protein
Chr3_-_5845220 0.51 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_22492811 0.51 AT3G60870.1
AHL18
AT-hook motif nuclear-localized protein 18
Chr5_-_7079077 0.51 AT5G20860.1
AT5G20860.2
AT5G20860
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_15186852 0.51 AT2G36210.1
AT2G36210
SAUR-like auxin-responsive protein family
Chr3_+_634465 0.51 AT3G02880.1
AT3G02880
Leucine-rich repeat protein kinase family protein
Chr2_+_18842516 0.51 AT2G45750.1
AT2G45750
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_27400474 0.51 AT1G72810.1
AT1G72810
Pyridoxal-5'-phosphate-dependent enzyme family protein
Chr3_+_546739 0.50 AT3G02580.1
STE1
sterol 1
Chr3_-_23375338 0.50 AT3G63260.2
AT3G63260.1
ATMRK1
Protein kinase superfamily protein
Chr4_-_947249 0.50 AT4G02130.1
GATL6
galacturonosyltransferase 6
Chr1_+_6643942 0.50 AT1G19230.2
AT1G19230
Riboflavin synthase-like superfamily protein
Chr5_-_1978987 0.50 AT5G06490.1
AT5G06490
RING/U-box superfamily protein
Chr3_-_4493737 0.50 AT3G13700.2
AT3G13700.1
AT3G13710.1
AT3G13700
PRA1.F4
RNA-binding (RRM/RBD/RNP motifs) family protein
prenylated RAB acceptor 1.F4
Chr3_-_20361560 0.50 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
Chr2_-_18914739 0.50 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr5_-_4697078 0.50 AT5G14570.1
NRT2.7
high affinity nitrate transporter 2.7
Chr4_-_2516703 0.50 AT4G04940.2
AT4G04940
transducin family protein / WD-40 repeat family protein
Chr5_-_6413259 0.50 AT5G19110.1
AT5G19110.2
AT5G19110
Eukaryotic aspartyl protease family protein
Chr3_+_18672906 0.50 AT3G50350.1
AT3G50350
membrane insertase, putative (DUF1685)
Chr5_-_20762461 0.49 AT5G51060.1
RHD2
NADPH/respiratory burst oxidase protein D
Chr5_-_6222811 0.49 AT5G18661.1
AT5G18661
transmembrane protein
Chr5_-_7040919 0.49 AT5G20790.1
AT5G20790
transmembrane protein
Chr1_+_3363432 0.49 AT1G10270.1
GRP23
glutamine-rich protein 23
Chr2_+_16291280 0.49 AT2G39010.2
AT2G39010.1
PIP2E
plasma membrane intrinsic protein 2E
Chr5_+_3780302 0.49 AT5G11730.1
AT5G11730
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr4_-_10132180 0.49 AT4G18340.2
AT4G18340.1
AT4G18340
Glycosyl hydrolase superfamily protein
Chr3_-_8807460 0.49 AT3G24300.1
AMT1%3B3
ammonium transporter 1;3
Chr3_-_4744263 0.49 AT3G14240.1
AT3G14240
Subtilase family protein
Chr3_-_17219411 0.48 AT3G46740.1
TOC75-III
translocon at the outer envelope membrane of chloroplasts 75-III
Chr1_+_10244453 0.48 AT1G29290.1
AT1G29290
B-cell lymphoma 6 protein
Chr1_-_27035182 0.48 AT1G71870.1
AT1G71870
MATE efflux family protein
Chr1_+_26555705 0.48 AT1G70460.1
PERK13
root hair specific 10
Chr5_-_25866972 0.48 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
Chr5_-_7040654 0.48 AT5G20790.2
AT5G20790
transmembrane protein
Chr4_-_17269999 0.48 AT4G36620.1
GATA19
GATA transcription factor 19
Chr3_-_42159 0.48 AT3G01120.1
MTO1
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr2_+_6034282 0.48 AT2G14247.1
AT2G14247
Expressed protein
Chr2_-_16737294 0.48 AT2G40085.1
AT2G40085
hypothetical protein
Chr4_-_10278794 0.48 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
Chr5_-_144863 0.48 AT5G01340.1
mSFC1
Mitochondrial substrate carrier family protein
Chr1_+_143489 0.48 AT1G01370.1
AT1G01370.2
AT1G01370.3
AT1G01370.4
HTR12
Histone superfamily protein
Chr3_+_9460433 0.47 AT3G25860.1
LTA2
2-oxoacid dehydrogenases acyltransferase family protein
Chr1_+_6644189 0.47 AT1G19230.1
AT1G19230
Riboflavin synthase-like superfamily protein
Chr1_+_5136874 0.47 AT1G14890.1
AT1G14890
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_22786022 0.47 AT3G61580.1
SLD1
Fatty acid/sphingolipid desaturase
Chr2_-_18620451 0.47 AT2G45160.1
HAM1
GRAS family transcription factor
Chr5_+_16370368 0.47 AT5G40860.2
AT5G40860.1
AT5G40860
transmembrane protein
Chr1_-_1161982 0.46 AT1G04330.1
AT1G04330
hypothetical protein
Chr3_+_6393747 0.46 AT3G18560.1
AT3G18560
hypothetical protein
Chr1_+_18312883 0.46 AT1G49475.1
AT1G49475
AP2/B3-like transcriptional factor family protein
Chr5_+_4156501 0.46 AT5G13100.1
AT5G13100
Gap junction beta-4 protein
Chr2_+_15119516 0.46 AT2G36010.3
AT2G36010.1
AT2G36010.2
E2F3
E2F transcription factor 3
Chr3_-_2055576 0.46 AT3G06590.1
AT3G06590.3
AT3G06590.4
AT3G06590
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_12441244 0.45 AT1G34160.1
AT1G34160.2
AT1G34160
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_17130186 0.45 AT5G42720.1
AT5G42720
Glycosyl hydrolase family 17 protein
Chr5_-_20468128 0.45 AT5G50300.1
AT5G50300.2
AZG2
Xanthine/uracil permease family protein
Chr4_+_14290947 0.45 AT4G28990.1
AT4G28990
RNA-binding protein-like protein
Chr2_+_10344338 0.45 AT2G24310.1
AT2G24310
TPRXL
Chr3_-_654480 0.45 AT3G02920.3
AT3G02920.1
AT3G02920.2
RPA32B
Replication protein A, subunit RPA32
Chr3_-_18039879 0.45 AT3G48700.1
CXE13
carboxyesterase 13
Chr4_+_14291151 0.45 AT4G28990.2
AT4G28990
RNA-binding protein-like protein
Chr1_+_6222201 0.45 AT1G18080.1
ATARCA
Transducin/WD40 repeat-like superfamily protein
Chr5_+_20689243 0.45 AT5G50850.1
MAB1
Transketolase family protein
Chr5_+_642554 0.44 AT5G02820.1
RHL2
Spo11/DNA topoisomerase VI, subunit A protein
Chr3_-_21523375 0.44 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G19790

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.8 GO:0006097 glyoxylate cycle(GO:0006097)
0.3 1.0 GO:1990532 stress response to nickel ion(GO:1990532)
0.3 0.8 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 1.0 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.2 0.9 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 1.0 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.2 1.7 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.2 0.6 GO:0032196 transposition(GO:0032196)
0.2 0.9 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.2 0.7 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.2 1.0 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.5 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.2 0.6 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.4 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.6 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.4 GO:0043132 NAD transport(GO:0043132)
0.1 2.0 GO:0010315 auxin efflux(GO:0010315)
0.1 0.5 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 1.5 GO:0048766 root hair initiation(GO:0048766)
0.1 0.4 GO:0015692 lead ion transport(GO:0015692)
0.1 0.5 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.1 0.5 GO:0010376 stomatal complex formation(GO:0010376)
0.1 0.2 GO:0015813 L-glutamate transport(GO:0015813)
0.1 3.8 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 0.9 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 0.4 GO:0048462 carpel formation(GO:0048462)
0.1 0.9 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.4 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 2.7 GO:0010345 suberin biosynthetic process(GO:0010345)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.3 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.1 0.8 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 0.5 GO:0046683 response to organophosphorus(GO:0046683)
0.1 0.8 GO:0010117 photoprotection(GO:0010117)
0.1 1.8 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 1.1 GO:0010274 hydrotropism(GO:0010274)
0.1 0.3 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 0.4 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.1 0.3 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.6 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.6 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.6 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.3 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.1 0.5 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 0.4 GO:0009650 UV protection(GO:0009650)
0.1 0.4 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 0.4 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.7 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 2.0 GO:0048236 plant-type spore development(GO:0048236)
0.1 1.9 GO:0006012 galactose metabolic process(GO:0006012)
0.1 0.2 GO:0030100 regulation of endocytosis(GO:0030100)
0.1 0.8 GO:0051865 protein autoubiquitination(GO:0051865)
0.1 0.3 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.2 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.6 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.3 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.2 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.1 0.3 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 0.2 GO:0070509 calcium ion import(GO:0070509)
0.1 0.3 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.5 GO:1990118 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.1 0.3 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.1 0.5 GO:0009088 threonine biosynthetic process(GO:0009088)
0.1 0.3 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 1.3 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.1 GO:0042908 xenobiotic transport(GO:0042908)
0.0 0.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.3 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.0 0.2 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.0 0.2 GO:0015824 proline transport(GO:0015824)
0.0 1.3 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.0 0.5 GO:1902025 nitrate import(GO:1902025)
0.0 0.7 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.6 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.4 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.2 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.0 0.8 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.2 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.0 0.2 GO:0070206 protein trimerization(GO:0070206)
0.0 0.5 GO:0034508 centromere complex assembly(GO:0034508)
0.0 0.1 GO:0019401 alditol biosynthetic process(GO:0019401)
0.0 0.4 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.4 GO:0009799 specification of symmetry(GO:0009799)
0.0 2.4 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.6 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 1.1 GO:0008361 regulation of cell size(GO:0008361)
0.0 0.5 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.2 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.0 0.1 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.0 0.2 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.3 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.6 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 2.1 GO:0009631 cold acclimation(GO:0009631)
0.0 0.5 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 1.1 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.2 GO:0009827 plant-type cell wall modification(GO:0009827)
0.0 0.8 GO:0007267 cell-cell signaling(GO:0007267)
0.0 1.2 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.4 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 2.3 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.3 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.8 GO:0042335 cuticle development(GO:0042335)
0.0 0.4 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.2 GO:0048830 adventitious root development(GO:0048830)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.5 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.2 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.3 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.3 GO:1903340 positive regulation of secondary cell wall biogenesis(GO:1901348) positive regulation of cell wall organization or biogenesis(GO:1903340)
0.0 0.1 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 0.2 GO:0006183 GTP biosynthetic process(GO:0006183)
0.0 0.1 GO:0007349 cellularization(GO:0007349)
0.0 0.3 GO:0032544 plastid translation(GO:0032544)
0.0 0.1 GO:0015846 polyamine transport(GO:0015846)
0.0 0.2 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.6 GO:0016109 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.6 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.2 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.3 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 0.5 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.6 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.1 GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972)
0.0 0.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.2 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.1 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.7 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 0.1 GO:0036065 fucosylation(GO:0036065)
0.0 1.0 GO:0009846 pollen germination(GO:0009846)
0.0 0.5 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.4 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.2 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.2 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.2 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.3 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.6 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 1.4 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.1 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.0 0.6 GO:0006414 translational elongation(GO:0006414)
0.0 0.2 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.0 0.1 GO:0051196 regulation of coenzyme metabolic process(GO:0051196)
0.0 0.1 GO:2000082 regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.0 0.0 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.0 0.1 GO:0032102 negative regulation of response to biotic stimulus(GO:0002832) negative regulation of response to external stimulus(GO:0032102)
0.0 0.6 GO:0060918 auxin transport(GO:0060918)
0.0 0.2 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.2 GO:0032261 purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.0 0.2 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.0 0.0 GO:0010769 regulation of cell morphogenesis involved in differentiation(GO:0010769)
0.0 0.0 GO:1901881 positive regulation of protein complex disassembly(GO:0043243) positive regulation of protein depolymerization(GO:1901881)
0.0 0.3 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 0.6 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.0 0.1 GO:0006116 NADH oxidation(GO:0006116)
0.0 0.2 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.1 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.5 GO:0048767 root hair elongation(GO:0048767)
0.0 0.1 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.0 0.2 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 1.0 GO:0006869 lipid transport(GO:0006869)
0.0 0.4 GO:0010218 response to far red light(GO:0010218)
0.0 0.3 GO:0019915 lipid storage(GO:0019915)
0.0 0.5 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.3 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.0 GO:0044090 positive regulation of vacuole organization(GO:0044090)
0.0 0.2 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.2 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.3 GO:0010927 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.1 GO:0042753 positive regulation of circadian rhythm(GO:0042753)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.4 1.2 GO:0009514 glyoxysome(GO:0009514)
0.2 1.0 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1 0.9 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.1 0.4 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 0.2 GO:0043668 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.1 0.3 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.1 0.2 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 0.4 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 10.2 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.5 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.2 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.9 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.5 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.3 GO:0030139 endocytic vesicle(GO:0030139)
0.0 4.8 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.3 GO:0042555 MCM complex(GO:0042555)
0.0 0.4 GO:0005769 early endosome(GO:0005769)
0.0 0.2 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 4.9 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.1 GO:0034657 GID complex(GO:0034657)
0.0 0.3 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.1 GO:0030874 nucleolar chromatin(GO:0030874)
0.0 1.8 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 1.1 GO:0005811 lipid particle(GO:0005811)
0.0 1.1 GO:0090406 pollen tube(GO:0090406)
0.0 0.3 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.8 GO:0005764 lysosome(GO:0005764)
0.0 0.2 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 0.3 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.3 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.1 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.8 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 1.0 GO:0005615 extracellular space(GO:0005615)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 1.5 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.1 GO:0043073 germ cell nucleus(GO:0043073)
0.0 0.1 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.1 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 0.2 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.3 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 1.0 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.3 1.2 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.3 1.2 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 1.0 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 0.9 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.2 0.6 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.2 0.6 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.2 1.1 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.2 0.6 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.2 1.0 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.2 0.6 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.2 1.8 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.2 1.7 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.2 0.5 GO:0000248 C-5 sterol desaturase activity(GO:0000248)
0.2 0.8 GO:0003680 AT DNA binding(GO:0003680)
0.2 0.5 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.2 0.5 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.2 0.8 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.4 GO:0005078 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.1 1.1 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.8 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.5 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 0.5 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 0.5 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 0.8 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.6 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 2.0 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.3 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.1 0.3 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 1.3 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.1 0.8 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.3 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.1 0.3 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 0.3 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 0.4 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.1 1.4 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 0.7 GO:0004806 triglyceride lipase activity(GO:0004806)
0.1 0.4 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.2 GO:0015292 uniporter activity(GO:0015292)
0.1 0.3 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.4 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.2 GO:0016504 peptidase activator activity(GO:0016504)
0.1 0.2 GO:0004560 alpha-L-fucosidase activity(GO:0004560)
0.1 0.3 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 0.2 GO:0015131 oxaloacetate transmembrane transporter activity(GO:0015131)
0.1 0.5 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.9 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.2 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 1.2 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.1 0.5 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.1 0.2 GO:1901474 L-ornithine transmembrane transporter activity(GO:0000064) azole transmembrane transporter activity(GO:1901474)
0.1 2.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.2 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 0.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.4 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.6 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.4 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.1 0.3 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 0.2 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.0 0.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.5 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.2 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 0.6 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 0.3 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.3 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.0 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 1.3 GO:0005179 hormone activity(GO:0005179)
0.0 0.4 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.2 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.0 0.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.7 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.3 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 1.8 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295)
0.0 0.5 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.1 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.0 0.7 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.0 0.2 GO:0016676 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.2 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.0 0.3 GO:0008083 growth factor activity(GO:0008083)
0.0 2.2 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 1.6 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 2.2 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.4 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 1.1 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.3 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.1 GO:0051738 xanthophyll binding(GO:0051738)
0.0 0.3 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 1.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.8 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.6 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.5 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.0 0.5 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.5 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.1 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0 0.1 GO:0045181 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.5 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.5 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 1.4 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.1 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.0 0.8 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 0.1 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 0.6 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0016842 amidine-lyase activity(GO:0016842)
0.0 0.1 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.0 0.2 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.3 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 1.0 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.2 GO:0019239 deaminase activity(GO:0019239)
0.0 0.2 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.2 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.1 GO:0004834 tryptophan synthase activity(GO:0004834)
0.0 0.2 GO:0017022 myosin binding(GO:0017022)
0.0 0.2 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.0 0.2 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.2 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.4 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.3 GO:0008144 drug binding(GO:0008144)
0.0 0.4 GO:0008810 cellulase activity(GO:0008810)
0.0 0.2 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 0.5 GO:0016838 carbon-oxygen lyase activity, acting on phosphates(GO:0016838)
0.0 0.2 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.3 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.3 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.4 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0015166 myo-inositol transmembrane transporter activity(GO:0005365) polyol transmembrane transporter activity(GO:0015166) alcohol transmembrane transporter activity(GO:0015665)
0.0 0.2 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 1.1 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 0.5 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.3 GO:0004089 carbonate dehydratase activity(GO:0004089)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 PID MYC PATHWAY C-MYC pathway
0.2 0.5 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.1 0.5 PID UPA UPAR PATHWAY Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling
0.1 0.5 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.5 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.4 PID FANCONI PATHWAY Fanconi anemia pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.2 0.5 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.3 REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS Genes involved in p130Cas linkage to MAPK signaling for integrins
0.1 0.7 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0 0.9 REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
0.0 0.2 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.0 0.4 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.3 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.2 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.1 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism