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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G15840

Z-value: 0.20

Transcription factors associated with AT5G15840

Gene Symbol Gene ID Gene Info
AT5G15840 B-box type zinc finger protein with CCT domain-containing protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
COarTal_v1_Chr5_-_5173083_51730850.544.5e-02Click!

Activity profile of AT5G15840 motif

Sorted Z-values of AT5G15840 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_18811085 0.40 AT2G45660.2
AT2G45660.1
AGAMOUS-like 20
Chr3_-_20629295 0.40 AT3G55610.1
delta 1-pyrroline-5-carboxylate synthase 2
Chr3_-_20629093 0.39 AT3G55610.2
delta 1-pyrroline-5-carboxylate synthase 2
Chr1_-_23320427 0.02 AT1G62960.1
ACC synthase 10

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G15840

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.0 0.4 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)