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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G13910

Z-value: 0.53

Transcription factors associated with AT5G13910

Gene Symbol Gene ID Gene Info
AT5G13910
AT5G13910 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LEParTal_v1_Chr5_-_4483247_4483247-0.029.4e-01Click!

Activity profile of AT5G13910 motif

Sorted Z-values of AT5G13910 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_-_9956960 0.93 AT1G28370.1
AT1G28370.2
ERF11
ERF domain protein 11
Chr4_-_9754161 0.91 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr5_+_5718498 0.69 AT5G17350.1
AT5G17350
hypothetical protein
Chr1_+_29502506 0.58 AT1G78410.1
AT1G78410.2
AT1G78410
VQ motif-containing protein
Chr5_-_37999 0.57 AT5G01100.1
FRB1
O-fucosyltransferase family protein
Chr5_+_26772644 0.54 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
Chr1_-_27640643 0.43 AT1G73500.1
MKK9
MAP kinase kinase 9
Chr5_-_4986377 0.43 AT5G15350.1
ENODL17
early nodulin-like protein 17
Chr3_-_3357754 0.38 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_10505711 0.37 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
Chr3_+_16569051 0.37 AT3G45230.1
AT3G45230
hydroxyproline-rich glycoprotein family protein
Chr1_+_28517939 0.37 AT1G75960.1
AT1G75960
AMP-dependent synthetase and ligase family protein
Chr1_+_6679281 0.36 AT1G19320.1
AT1G19320
Pathogenesis-related thaumatin superfamily protein
Chr4_-_7545512 0.36 AT4G12880.1
ENODL19
early nodulin-like protein 19
Chr3_-_6430517 0.35 AT3G18690.1
MKS1
MAP kinase substrate 1
Chr2_-_12188293 0.34 AT2G28500.1
LBD11
LOB domain-containing protein 11
Chr4_-_7545326 0.34 AT4G12880.2
ENODL19
early nodulin-like protein 19
Chr3_-_18594715 0.34 AT3G50140.1
AT3G50140.2
AT3G50140
transmembrane protein, putative (DUF247)
Chr4_+_9759203 0.33 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
Chr5_+_17731005 0.32 AT5G44060.1
AT5G44060
embryo sac development arrest protein
Chr1_-_18430497 0.31 AT1G49780.1
PUB26
plant U-box 26
Chr3_-_3356811 0.31 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_677240 0.31 AT3G03000.1
AT3G03000
EF hand calcium-binding protein family
Chr2_-_11777529 0.29 AT2G27580.2
AT2G27580.1
AT2G27580
A20/AN1-like zinc finger family protein
Chr1_-_24362054 0.29 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr5_+_25721733 0.27 AT5G64310.1
AGP1
arabinogalactan protein 1
Chr4_+_7042354 0.25 AT4G11660.1
AT-HSFB2B
winged-helix DNA-binding transcription factor family protein
Chr2_+_17886101 0.25 AT2G43010.1
AT2G43010.3
AT2G43010.4
PIF4
phytochrome interacting factor 4
Chr4_-_1005253 0.25 AT4G02290.2
AT4G02290.1
GH9B13
glycosyl hydrolase 9B13
Chr3_+_8112614 0.24 AT3G22890.1
APS1
ATP sulfurylase 1
Chr5_+_25191402 0.24 AT5G62720.1
AT5G62720
Integral membrane HPP family protein
Chr4_+_7758275 0.23 AT4G13340.1
LRX3
Leucine-rich repeat (LRR) family protein
Chr3_+_9480746 0.23 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
Chr1_+_11212958 0.22 AT1G31320.1
LBD4
LOB domain-containing protein 4
Chr5_+_25191860 0.22 AT5G62720.2
AT5G62720
Integral membrane HPP family protein
Chr2_+_11669629 0.22 AT2G27260.1
AT2G27260
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_-_11685342 0.22 AT2G27310.1
AT2G27310
F-box family protein
Chr2_+_17886427 0.21 AT2G43010.2
PIF4
phytochrome interacting factor 4
Chr3_+_17867131 0.21 AT3G48240.1
AT3G48240
Octicosapeptide/Phox/Bem1p family protein
Chr2_+_17886798 0.21 AT2G43010.5
PIF4
phytochrome interacting factor 4
Chr1_+_27397089 0.20 AT1G72800.1
AT1G72800
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr2_+_19079305 0.20 AT2G46490.1
AT2G46490
hypothetical protein
Chr3_+_5121303 0.20 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr3_+_22248892 0.20 AT3G60200.1
AT3G60200
hypothetical protein
Chr1_+_618061 0.19 AT1G02810.1
AT1G02810
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_14439723 0.19 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
Chr4_-_16853035 0.18 AT4G35480.1
RHA3B
RING-H2 finger A3B
Chr2_+_17902370 0.18 AT2G43050.1
ATPMEPCRD
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_+_26814260 0.18 AT1G71100.1
RSW10
Ribose 5-phosphate isomerase, type A protein
Chr1_+_898480 0.18 AT1G03600.1
PSB27
photosystem II family protein
Chr1_+_27394598 0.17 AT1G72790.1
AT1G72790
hydroxyproline-rich glycoprotein family protein
Chr3_+_22331427 0.17 AT3G60410.2
AT3G60410.1
AT3G60410.3
AT3G60410
hypothetical protein (DUF1639)
Chr5_+_5078200 0.17 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr3_-_1261634 0.17 AT3G04640.2
AT3G04640.1
AT3G04640.3
AT3G04640
glycine-rich protein
Chr5_+_4756057 0.17 AT5G14730.1
AT5G14730
hypothetical protein
Chr4_+_15490740 0.17 AT4G32030.2
AT4G32030
hypothetical protein
Chr3_-_5618322 0.17 AT3G16510.1
AT3G16510
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr2_+_19469571 0.16 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_-_40298 0.16 AT4G00110.1
GAE3
UDP-D-glucuronate 4-epimerase 3
Chr4_+_15490566 0.16 AT4G32030.1
AT4G32030
hypothetical protein
Chr3_-_1822858 0.16 AT3G06030.1
NP3
NPK1-related protein kinase 3
Chr1_-_8559066 0.16 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr5_-_23267818 0.16 AT5G57410.2
AT5G57410.3
AT5G57410.1
AT5G57410
Afadin/alpha-actinin-binding protein
Chr1_-_11222789 0.16 AT1G31350.1
AT1G31350.2
KUF1
KAR-UP F-box 1
Chr3_-_23301865 0.15 AT3G63060.1
EDL3
EID1-like 3
Chr4_+_12830915 0.15 AT4G24970.1
AT4G24970
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Chr1_-_27947886 0.15 AT1G74330.2
AT1G74330.3
AT1G74330
Protein kinase superfamily protein
Chr1_-_9968301 0.15 AT1G28390.2
AT1G28390
Protein kinase superfamily protein
Chr5_-_5358789 0.15 AT5G16370.1
AAE5
acyl activating enzyme 5
Chr2_+_7936990 0.15 AT2G18245.1
AT2G18245
alpha/beta-Hydrolases superfamily protein
Chr4_-_12890261 0.15 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
Chr1_-_9968495 0.14 AT1G28390.1
AT1G28390
Protein kinase superfamily protein
Chr3_+_20666887 0.14 AT3G55690.1
AT3G55690
hypothetical protein
Chr4_+_8516372 0.14 AT4G14860.1
OFP11
ovate family protein 11
Chr1_-_9458176 0.14 AT1G27210.1
AT1G27210
ARM repeat superfamily protein
Chr4_+_12977192 0.14 AT4G25390.1
AT4G25390.2
AT4G25390
Protein kinase superfamily protein
Chr2_-_7577846 0.13 AT2G17450.1
RHA3A
RING-H2 finger A3A
Chr5_-_17356706 0.13 AT5G43250.1
NF-YC13
nuclear factor Y, subunit C13
Chr1_+_1682224 0.13 AT1G05630.1
AT1G05630.2
AT1G05630.3
5PTASE13
Endonuclease/exonuclease/phosphatase family protein
Chr2_+_621058 0.13 AT2G02370.1
AT2G02370.3
AT2G02370.2
AT2G02370
SNARE associated Golgi protein family
Chr1_+_26964087 0.13 AT1G71695.1
AT1G71695
Peroxidase superfamily protein
Chr5_-_20544857 0.12 AT5G50450.1
AT5G50450
HCP-like superfamily protein with MYND-type zinc finger
Chr1_+_21028137 0.12 AT1G56190.1
AT1G56190.2
AT1G56190
Phosphoglycerate kinase family protein
Chr4_-_8305857 0.12 AT4G14430.1
IBR10
indole-3-butyric acid response 10
Chr1_-_6278150 0.12 AT1G18250.2
AT1G18250.1
ATLP-1
Pathogenesis-related thaumatin superfamily protein
Chr4_-_947075 0.12 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr1_+_2047634 0.12 AT1G06680.1
PSBP-1
photosystem II subunit P-1
Chr5_+_22341750 0.12 AT5G55060.2
AT5G55060.1
AT5G55060
Rab3 GTPase-activating protein catalytic subunit
Chr4_-_4805337 0.12 AT4G07960.2
CSLC12
Cellulose-synthase-like C12
Chr1_+_2047886 0.12 AT1G06680.2
PSBP-1
photosystem II subunit P-1
Chr1_-_23892193 0.12 AT1G64380.1
AT1G64380
Integrase-type DNA-binding superfamily protein
Chr4_-_4805647 0.12 AT4G07960.1
CSLC12
Cellulose-synthase-like C12
Chr1_-_9406369 0.12 AT1G27090.1
AT1G27090
glycine-rich protein
Chr4_-_947249 0.11 AT4G02130.1
GATL6
galacturonosyltransferase 6
Chr5_-_4474530 0.11 AT5G13860.1
ELC-Like
ELCH-like protein
Chr4_+_4797841 0.11 AT4G07950.1
AT4G07950
DNA-directed RNA polymerase, subunit M, archaeal
Chr4_+_17349218 0.11 AT4G36830.2
AT4G36830.1
HOS3-1
GNS1/SUR4 membrane protein family
Chr5_-_17941646 0.11 AT5G44540.1
AT5G44540
Tapetum specific protein TAP35/TAP44
Chr1_-_30304428 0.11 AT1G80610.1
AT1G80610
hypothetical protein
Chr5_+_25831635 0.11 AT5G64620.1
C/VIF2
cell wall / vacuolar inhibitor of fructosidase 2
Chr3_-_18882172 0.10 AT3G50790.2
AT3G50790.1
AT3G50790
esterase/lipase/thioesterase family protein
Chr4_+_14566183 0.10 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4
Chr3_-_6526044 0.10 AT3G18930.1
AT3G18930.3
AT3G18930
RING/U-box superfamily protein
Chr5_+_22341967 0.10 AT5G55060.3
AT5G55060
Rab3 GTPase-activating protein catalytic subunit
Chr5_-_9486365 0.10 AT5G26960.1
AT5G26960
Galactose oxidase/kelch repeat superfamily protein
Chr1_-_5077981 0.10 AT1G14740.1
TTA1
class I heat shock protein, putative (DUF1423)
Chr5_+_4826141 0.10 AT5G14920.1
AT5G14920.2
AT5G14920
Gibberellin-regulated family protein
Chr5_+_18561033 0.10 AT5G45760.1
AT5G45760.2
AT5G45760
Transducin/WD40 repeat-like superfamily protein
Chr3_-_6716178 0.10 AT3G19380.1
PUB25
plant U-box 25
Chr1_+_5090809 0.10 AT1G14780.1
AT1G14780
MAC/Perforin domain-containing protein
Chr1_-_1379228 0.10 AT1G04880.1
AT1G04880
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein
Chr3_+_23172754 0.10 AT3G62660.1
GATL7
galacturonosyltransferase-like 7
Chr3_-_16807950 0.10 AT3G45770.1
AT3G45770
Polyketide synthase, enoylreductase family protein
Chr4_-_172845 0.10 AT4G00390.1
AT4G00390
DNA-binding storekeeper protein-related transcriptional regulator
Chr3_+_5644593 0.09 AT3G16570.1
AT3G16570.2
AT3G16570.3
RALF23
rapid alkalinization factor 23
Chr1_-_29278631 0.09 AT1G77855.1
AT1G77855
BPS1-like protein
Chr3_-_6525543 0.09 AT3G18930.2
AT3G18930
RING/U-box superfamily protein
Chr1_-_1399053 0.09 AT1G04930.3
AT1G04930.2
AT1G04930.1
AT1G04930
hydroxyproline-rich glycoprotein family protein
Chr1_+_7963813 0.09 AT1G22540.1
AT1G22540
Major facilitator superfamily protein
Chr3_+_3694956 0.09 AT3G11690.1
AT3G11690
hypothetical protein
Chr1_+_23727794 0.09 AT1G63930.1
ROH1
from the Czech 'roh' meaning 'corner'
Chr1_-_4265156 0.09 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr3_-_18308091 0.09 AT3G49370.1
AT3G49370
Calcium-dependent protein kinase (CDPK) family protein
Chr3_+_5341356 0.09 AT3G15780.1
AT3G15780
transmembrane protein
Chr1_-_27947109 0.09 AT1G74330.1
AT1G74330
Protein kinase superfamily protein
Chr3_-_2524168 0.09 AT3G07910.1
AT3G07910
reactive oxygen species modulator-like protein
Chr3_+_11247011 0.09 AT3G29300.1
AT3G29300
transmembrane protein
Chr5_-_24975632 0.09 AT5G62170.1
AT5G62170.2
AT5G62170.4
AT5G62170.3
TRM25
LOW protein: M-phase inducer phosphatase-like protein
Chr2_-_10697175 0.09 AT2G25130.1
AT2G25130
ARM repeat superfamily protein
Chr3_+_19431095 0.08 AT3G52430.1
PAD4
alpha/beta-Hydrolases superfamily protein
Chr3_-_16807795 0.08 AT3G45770.2
AT3G45770
Polyketide synthase, enoylreductase family protein
Chr5_+_1503232 0.08 AT5G05090.1
AT5G05090
Homeodomain-like superfamily protein
Chr1_-_8310916 0.08 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein
Chr2_+_3618058 0.08 AT2G08986.1
AT2G08986
hypothetical protein
Chr1_+_25561638 0.08 AT1G68200.1
AT1G68200.3
AT1G68200.2
AT1G68200.4
AT1G68200.5
AT1G68200
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr1_+_11844660 0.08 AT1G32740.2
AT1G32740.1
AT1G32740.3
AT1G32740
SBP (S-ribonuclease binding protein) family protein
Chr4_-_3065294 0.08 AT4G06477.1
AT4G06477

Chr5_-_4734712 0.07 AT5G14690.2
AT5G14690
transmembrane protein
Chr3_-_10941833 0.07 AT3G28920.1
HB34
homeobox protein 34
Chr3_+_8970632 0.07 AT3G24590.2
AT3G24590.1
PLSP1
plastidic type i signal peptidase 1
Chr2_+_9112798 0.07 AT2G21290.1
AT2G21290
30S ribosomal protein S31
Chr3_+_11246750 0.07 AT3G29300.2
AT3G29300
transmembrane protein
Chr5_+_26660311 0.07 AT5G66770.1
AT5G66770
GRAS family transcription factor
Chr3_+_8648669 0.07 AT3G23940.1
AT3G23940.2
AT3G23940
dehydratase family
Chr3_-_17138259 0.07 AT3G46550.1
SOS5
Fasciclin-like arabinogalactan family protein
Chr2_+_9937792 0.07 AT2G23340.1
DEAR3
DREB and EAR motif protein 3
Chr5_+_395567 0.07 AT5G02030.1
RPL
POX (plant homeobox) family protein
Chr3_+_23142485 0.07 AT3G62570.1
AT3G62570
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_26104614 0.07 AT5G65310.1
HB5
homeobox protein 5
Chr1_-_26343150 0.07 AT1G69935.2
AT1G69935.1
SHW1
short hypocotyl in white light1
Chr4_+_9467512 0.07 AT4G16820.1
PLA-I%7Bbeta]2
alpha/beta-Hydrolases superfamily protein
Chr1_-_23801283 0.06 AT1G64110.5
AT1G64110.4
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_+_2055519 0.06 AT2G05580.1
AT2G05580
Glycine-rich protein family
Chr4_-_18073182 0.06 AT4G38680.1
GRP2
glycine rich protein 2
Chr3_-_18096891 0.06 AT3G48800.1
AT3G48800
Sterile alpha motif (SAM) domain-containing protein
Chr1_+_4416315 0.06 AT1G12940.1
NRT2.5
nitrate transporter2.5
Chr4_-_7386931 0.06 AT4G12450.1
AT4G12450
zinc finger (C2H2 type) family protein
Chr1_+_4735474 0.06 AT1G13820.1
AT1G13820
alpha/beta-Hydrolases superfamily protein
Chr2_+_1156593 0.06 AT2G03800.2
AT2G03800.1
GEK1
D-aminoacyl-tRNA deacylase
Chr3_+_21919080 0.06 AT3G59300.3
AT3G59300
Pentatricopeptide repeat (PPR) superfamily protein
Chr1_-_23801720 0.06 AT1G64110.1
AT1G64110.3
AT1G64110.2
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_10007218 0.06 AT4G18020.9
APRR2
CheY-like two-component responsive regulator family protein
Chr5_-_7081789 0.06 AT5G20870.1
AT5G20870
O-Glycosyl hydrolases family 17 protein
Chr5_-_26104174 0.06 AT5G65310.2
HB5
homeobox protein 5
Chr5_-_16913991 0.06 AT5G42300.1
UBL5
ubiquitin-like protein 5
Chr5_+_17154718 0.06 AT5G42780.1
HB27
homeobox protein 27
Chr2_-_17613591 0.06 AT2G42280.2
AT2G42280.3
AT2G42280.1
FBH4
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_29117500 0.06 AT1G77490.1
AT1G77490.2
TAPX
thylakoidal ascorbate peroxidase
Chr2_-_10989117 0.06 AT2G25760.1
AT2G25760
Protein kinase family protein
Chr2_-_1364788 0.06 AT2G04090.1
AT2G04090
MATE efflux family protein
Chr2_-_13864596 0.05 AT2G32690.2
AT2G32690.3
AT2G32690.5
AT2G32690.4
AT2G32690.1
GRP23
glycine-rich protein 23
Chr2_+_15944583 0.05 AT2G38090.1
AT2G38090
Duplicated homeodomain-like superfamily protein
Chr1_-_25514601 0.05 AT1G68060.1
MAP70-1
microtubule-associated proteins 70-1
Chr5_-_13853742 0.05 AT5G35660.1
AT5G35660
Glycine-rich protein family
Chr2_+_7564240 0.05 AT2G17420.1
AT2G17420.2
NTRA
NADPH-dependent thioredoxin reductase A
Chr2_+_15514923 0.05 AT2G36950.1
AT2G36950
Heavy metal transport/detoxification superfamily protein
Chr5_-_26578625 0.05 AT5G66600.3
AT5G66600
electron transporter, putative (Protein of unknown function, DUF547)
Chr3_+_20213406 0.05 AT3G54610.1
HAG1
histone acetyltransferase of the GNAT family 1
Chr1_-_29465249 0.05 AT1G78310.1
AT1G78310
VQ motif-containing protein
Chr5_-_24934484 0.05 AT5G62080.1
AT5G62080
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_11577419 0.05 AT4G21820.2
AT4G21820.1
AT4G21820.3
AT4G21820
binding / calmodulin binding protein
Chr3_-_1617339 0.05 AT3G05570.1
AT3G05570
dipeptide transport ATP-binding protein
Chr1_-_23062063 0.05 AT1G62360.1
STM
KNOX/ELK homeobox transcription factor
Chr4_-_15339613 0.05 AT4G31670.1
UBP18
ubiquitin-specific protease 18
Chr4_-_8369312 0.05 AT4G14580.1
CIPK4
CBL-interacting protein kinase 4
Chr3_+_21918321 0.05 AT3G59300.2
AT3G59300.1
AT3G59300
Pentatricopeptide repeat (PPR) superfamily protein
Chr1_+_11844988 0.05 AT1G32740.4
AT1G32740
SBP (S-ribonuclease binding protein) family protein
Chr3_+_2254479 0.04 AT3G07120.1
AT3G07120
RING/U-box superfamily protein
Chr5_-_26578075 0.04 AT5G66600.2
AT5G66600
electron transporter, putative (Protein of unknown function, DUF547)
Chr5_+_9149073 0.04 AT5G26180.1
AT5G26180.2
AT5G26180.4
AT5G26180.3
AT5G26180.5
AT5G26180
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_2304435 0.04 AT1G07510.1
ftsh10
FTSH protease 10
Chr5_+_5084524 0.04 AT5G15630.1
AT5G15630.2
AT5G15630.3
AT5G15630.4
AT5G15630.5
IRX6
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Chr5_-_5615915 0.04 AT5G17070.2
AT5G17070
serine/threonine-protein phosphatase 4 regulatory subunit-like protein
Chr3_-_42159 0.04 AT3G01120.1
MTO1
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr1_-_26872152 0.04 AT1G71280.1
AT1G71280.2
AT1G71280
DEA(D/H)-box RNA helicase family protein
Chr1_-_2467058 0.04 AT1G07950.1
AT1G07950.2
MED22B
Surfeit locus protein 5 subunit 22 of Mediator complex
Chr5_-_9357449 0.04 AT5G26622.1
AT5G26622
Beta-galactosidase related protein
Chr1_+_28163344 0.04 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
Chr4_-_10007443 0.04 AT4G18020.10
AT4G18020.11
AT4G18020.3
AT4G18020.4
AT4G18020.2
AT4G18020.7
AT4G18020.1
AT4G18020.5
AT4G18020.8
AT4G18020.6
APRR2
CheY-like two-component responsive regulator family protein
Chr2_+_16634519 0.04 AT2G39851.1
AT2G39851
Proteinase inhibitor, propeptide

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G13910

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.3 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.6 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.0 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.0 0.7 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.5 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.0 0.1 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.0 0.1 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.1 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.0 2.0 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.0 0.2 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 0.1 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.0 0.1 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.2 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.3 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.1 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.0 1.1 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.1 GO:0048439 flower morphogenesis(GO:0048439)
0.0 0.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.2 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.1 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.1 GO:0009897 external side of plasma membrane(GO:0009897)
0.0 0.1 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.2 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.1 0.2 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.2 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.0 0.2 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.0 0.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.1 GO:0052659 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.0 0.4 GO:0019209 MAP kinase kinase activity(GO:0004708) kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.0 0.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 1.1 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.0 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.1 GO:0009922 fatty acid elongase activity(GO:0009922)
0.0 0.6 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.2 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.0 GO:0008517 folic acid transporter activity(GO:0008517)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.2 GO:0005199 structural constituent of cell wall(GO:0005199)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism