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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G13790

Z-value: 2.43

Transcription factors associated with AT5G13790

Gene Symbol Gene ID Gene Info
AT5G13790
AT5G13790 AGAMOUS-like 15

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AGL15arTal_v1_Chr5_-_4450864_44509580.234.2e-01Click!

Activity profile of AT5G13790 motif

Sorted Z-values of AT5G13790 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_1693548 2.83 AT3G05727.1
AT3G05727
S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family
Chr3_-_23334034 2.36 AT3G63160.1
OEP6
outer envelope membrane protein
Chr3_+_10547441 2.17 AT3G28290.1
AT14A
transmembrane protein, putative (DUF677)
Chr4_+_15451988 2.17 AT4G31940.1
CYP82C4
cytochrome P450, family 82, subfamily C, polypeptide 4
Chr1_-_10289666 2.06 AT1G29395.1
COR413IM1
COLD REGULATED 314 INNER MEMBRANE 1
Chr5_+_17987591 2.02 AT5G44590.2
AT5G44590.1
AT5G44590
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_21240717 1.99 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr1_-_23246949 1.96 AT1G62770.1
AT1G62770
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_-_19370478 1.90 AT2G47180.1
GolS1
galactinol synthase 1
Chr3_-_7796310 1.86 AT3G22120.1
AT3G22120.2
CWLP
cell wall-plasma membrane linker protein
Chr5_-_20204595 1.83 AT5G49730.1
AT5G49730.2
FRO6
ferric reduction oxidase 6
Chr2_+_2026162 1.81 AT2G05520.4
AT2G05520.5
AT2G05520.6
AT2G05520.3
GRP-3
glycine-rich protein 3
Chr1_-_20719165 1.78 AT1G55490.1
AT1G55490.2
AT1G55490.4
AT1G55490.3
AT1G55490.5
CPN60B
chaperonin 60 beta
Chr3_-_489467 1.77 AT3G02380.1
COL2
CONSTANS-like 2
Chr4_-_18472048 1.73 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr3_+_6023844 1.70 AT3G17609.2
AT3G17609.3
AT3G17609.4
AT3G17609.1
HYH
HY5-homolog
Chr5_+_4776733 1.67 AT5G14780.1
AT5G14780.3
AT5G14780.2
FDH
formate dehydrogenase
Chr1_-_9275193 1.66 AT1G26790.1
AT1G26790
Dof-type zinc finger DNA-binding family protein
Chr2_+_2025991 1.66 AT2G05520.2
AT2G05520.1
GRP-3
glycine-rich protein 3
Chr3_+_19265141 1.60 AT3G51910.1
HSFA7A
heat shock transcription factor A7A
Chr5_+_15878698 1.58 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr5_+_5206156 1.58 AT5G15950.2
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr1_+_3019639 1.58 AT1G09350.1
GolS3
galactinol synthase 3
Chr5_+_5205869 1.56 AT5G15950.1
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr5_-_10070899 1.53 AT5G28060.1
AT5G28060
Ribosomal protein S24e family protein
Chr4_+_8827600 1.51 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
Chr1_-_19762560 1.51 AT1G53035.2
AT1G53035.1
AT1G53035
transmembrane protein
Chr5_-_5177897 1.49 AT5G15850.1
COL1
CONSTANS-like 1
Chr1_-_2165261 1.49 AT1G07050.2
AT1G07050.1
AT1G07050
CCT motif family protein
Chr1_-_26163715 1.47 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr1_-_3756998 1.46 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr3_+_22635803 1.46 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
Chr1_+_29759030 1.46 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
Chr1_+_3020221 1.45 AT1G09350.2
GolS3
galactinol synthase 3
Chr3_+_22216540 1.45 AT3G60140.2
AT3G60140.1
DIN2
Glycosyl hydrolase superfamily protein
Chr3_+_16818347 1.43 AT3G45780.2
PHOT1
phototropin 1
Chr3_-_10599042 1.43 AT3G28345.1
ABCB15
ABC transporter family protein
Chr1_+_26122080 1.42 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
Chr3_+_16816721 1.39 AT3G45780.1
PHOT1
phototropin 1
Chr3_+_5243432 1.38 AT3G15510.1
NAC2
NAC domain containing protein 2
Chr1_+_3093644 1.36 AT1G09560.1
GLP5
germin-like protein 5
Chr5_-_24741304 1.36 AT5G61520.2
AT5G61520.1
AT5G61520
Major facilitator superfamily protein
Chr4_+_17639 1.35 AT4G00050.1
AT4G00050.3
AT4G00050.2
UNE10
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_17171807 1.35 AT5G42825.1
AT5G42825
hypothetical protein
Chr1_-_29459493 1.33 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
Chr4_+_2289902 1.31 AT4G04570.2
AT4G04570.1
CRK40
cysteine-rich RLK (RECEPTOR-like protein kinase) 40
Chr2_-_521707 1.30 AT2G02080.4
AT2G02080.2
AT2G02080.5
AT2G02080.6
AT2G02080.3
AT2G02080.1
IDD4
indeterminate(ID)-domain 4
Chr4_-_16631339 1.30 AT4G34900.3
AT4G34900.2
AT4G34900.1
XDH2
xanthine dehydrogenase 2
Chr4_-_900361 1.29 AT4G02050.2
STP7
sugar transporter protein 7
Chr2_+_15238093 1.28 AT2G36350.1
AT2G36350
Protein kinase superfamily protein
Chr5_+_21020014 1.27 AT5G51750.1
SBT1.3
subtilase 1.3
Chr1_+_18701882 1.25 AT1G50480.1
THFS
10-formyltetrahydrofolate synthetase
Chr5_-_20775701 1.24 AT5G51100.2
AT5G51100.3
AT5G51100.4
AT5G51100.5
AT5G51100.1
FSD2
Fe superoxide dismutase 2
Chr3_-_4974521 1.24 AT3G14810.1
AT3G14810.2
MSL5
mechanosensitive channel of small conductance-like 5
Chr1_-_9848015 1.24 AT1G28190.1
AT1G28190
hypothetical protein
Chr1_+_9829261 1.23 AT1G28135.1
AT1G28135
hypothetical protein
Chr3_-_22915393 1.23 AT3G61890.1
HB-12
homeobox 12
Chr4_-_12345652 1.22 AT4G23700.2
CHX17
cation/H+ exchanger 17
Chr1_-_756303 1.22 AT1G03140.1
AT1G03140
splicing factor Prp18 family protein
Chr3_-_14879792 1.22 AT3G42790.1
AL3
alfin-like 3
Chr1_-_4921535 1.21 AT1G14380.3
AT1G14380.4
AT1G14380.2
AT1G14380.5
AT1G14380.6
AT1G14380.7
AT1G14380.1
IQD28
IQ-domain 28
Chr4_-_901072 1.21 AT4G02050.1
STP7
sugar transporter protein 7
Chr2_+_17582673 1.21 AT2G42190.2
AT2G42190.1
AT2G42190.3
AT2G42190
rho GTPase-activating gacO-like protein
Chr4_+_10103866 1.20 AT4G18280.1
AT4G18280
glycine-rich cell wall protein-like protein
Chr5_-_1508927 1.20 AT5G05110.1
AT5G05110
Cystatin/monellin family protein
Chr4_-_843531 1.20 AT4G01940.1
NFU1
NFU domain protein 1
Chr4_-_12346051 1.20 AT4G23700.1
CHX17
cation/H+ exchanger 17
Chr1_-_4651549 1.20 AT1G13600.1
bZIP58
basic leucine-zipper 58
Chr5_+_2657054 1.18 AT5G08260.1
scpl35
serine carboxypeptidase-like 35
Chr3_+_2441565 1.18 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
Chr1_-_28466971 1.17 AT1G75820.1
CLV1
Leucine-rich receptor-like protein kinase family protein
Chr1_-_28302728 1.17 AT1G75410.3
AT1G75410.1
BLH3
BEL1-like homeodomain 3
Chr5_-_24083528 1.17 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
Chr5_+_23940745 1.17 AT5G59350.1
AT5G59350.2
AT5G59350.3
AT5G59350
transmembrane protein
Chr3_-_4235814 1.15 AT3G13175.1
AT3G13175
transmembrane protein
Chr5_-_17626487 1.15 AT5G43840.1
HSFA6A
heat shock transcription factor A6A
Chr2_-_15511607 1.14 AT2G36930.1
AT2G36930
zinc finger (C2H2 type) family protein
Chr1_+_28272071 1.14 AT1G75350.1
emb2184
Ribosomal protein L31
Chr1_-_27257081 1.14 AT1G72410.2
AT1G72410.1
AT1G72410
COP1-interacting protein-like protein
Chr5_-_6240916 1.13 AT5G18700.1
AT5G18700
kinase family with ARM repeat domain-containing protein
Chr5_-_22435134 1.13 AT5G55310.1
TOP1BETA
DNA topoisomerase 1 beta
Chr4_+_14004401 1.13 AT4G28260.1
AT4G28260.2
AT4G28260
acyl-UDP-N-acetylglucosamine O-acyltransferase
Chr5_+_26664842 1.12 AT5G66790.1
AT5G66790
Protein kinase superfamily protein
Chr2_-_15092353 1.12 AT2G35940.3
AT2G35940.1
BLH1
BEL1-like homeodomain 1
Chr3_+_18262290 1.12 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
Chr4_-_545566 1.12 AT4G01310.1
AT4G01310
Ribosomal L5P family protein
Chr3_+_6191461 1.12 AT3G18080.1
BGLU44
B-S glucosidase 44
Chr5_-_3597237 1.11 AT5G11270.1
OCP3
overexpressor of cationic peroxidase 3
Chr1_+_4467094 1.11 AT1G13110.1
CYP71B7
cytochrome P450, family 71 subfamily B, polypeptide 7
Chr3_-_6901334 1.11 AT3G19850.1
AT3G19850
Phototropic-responsive NPH3 family protein
Chr5_-_20720681 1.10 AT5G50920.1
CLPC1
CLPC homologue 1
Chr1_+_8139114 1.10 AT1G22990.1
AT1G22990.2
HIPP22
Heavy metal transport/detoxification superfamily protein
Chr4_+_6218319 1.10 AT4G09890.1
AT4G09890
mediator of RNA polymerase II transcription subunit, putative (DUF3511)
Chr5_-_18189523 1.10 AT5G45070.1
PP2-A8
phloem protein 2-A8
Chr4_+_1151611 1.10 AT4G02630.1
AT4G02630
Protein kinase superfamily protein
Chr3_-_9282860 1.10 AT3G25560.3
AT3G25560.1
NIK2
NSP-interacting kinase 2
Chr2_-_19166949 1.09 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
Chr5_-_18435469 1.09 AT5G45500.3
AT5G45500.6
AT5G45500.2
AT5G45500.9
AT5G45500.1
AT5G45500.4
AT5G45500.7
AT5G45500.8
AT5G45500.5
AT5G45500
RNI-like superfamily protein
Chr2_-_17337269 1.09 AT2G41560.2
AT2G41560.3
ACA4
autoinhibited Ca(2+)-ATPase, isoform 4
Chr1_+_3157501 1.08 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr4_-_14975528 1.08 AT4G30720.1
PDE327
FAD/NAD(P)-binding oxidoreductase family protein
Chr5_+_8687188 1.08 AT5G25160.1
ZFP3
zinc finger protein 3
Chr1_-_22317070 1.08 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr3_+_188321 1.07 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr5_+_25328119 1.07 AT5G63140.1
PAP29
purple acid phosphatase 29
Chr5_-_17209569 1.07 AT5G42920.1
AT5G42920.2
THO5
THO complex, subunit 5
Chr4_-_7553332 1.07 AT4G12910.2
AT4G12910.1
scpl20
serine carboxypeptidase-like 20
Chr1_+_7508701 1.07 AT1G21450.1
SCL1
SCARECROW-like 1
Chr1_+_25319804 1.06 AT1G67560.1
LOX6
PLAT/LH2 domain-containing lipoxygenase family protein
Chr5_-_4392227 1.06 AT5G13630.2
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Chr5_-_4392429 1.06 AT5G13630.1
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Chr1_-_3100695 1.06 AT1G09570.5
AT1G09570.1
AT1G09570.6
PHYA
phytochrome A
Chr1_+_11568654 1.06 AT1G32160.1
AT1G32160
beta-casein (DUF760)
Chr5_-_3430492 1.05 AT5G10860.1
CBSX3
Cystathionine beta-synthase (CBS) family protein
Chr1_-_1337849 1.05 AT1G04770.1
AT1G04770
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_3099830 1.05 AT1G09570.4
AT1G09570.3
PHYA
phytochrome A
Chr3_-_22169984 1.05 AT3G60030.1
SPL12
squamosa promoter-binding protein-like 12
Chr5_-_3595003 1.04 AT5G11260.2
AT5G11260.1
HY5
Basic-leucine zipper (bZIP) transcription factor family protein
Chr5_+_18791575 1.04 AT5G46330.1
AT5G46330.2
FLS2
Leucine-rich receptor-like protein kinase family protein
Chr1_-_25738134 1.04 AT1G68560.1
XYL1
alpha-xylosidase 1
Chr4_+_2288616 1.04 AT4G04570.3
CRK40
cysteine-rich RLK (RECEPTOR-like protein kinase) 40
Chr3_-_3741662 1.04 AT3G11850.1
AT3G11850.2
AT3G11850
myosin-binding protein (Protein of unknown function, DUF593)
Chr3_+_5081780 1.03 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
Chr3_+_1539527 1.03 AT3G05380.4
AT3G05380.2
AT3G05380.3
AT3G05380.1
AT3G05380.5
ALY2
ALWAYS EARLY 2
Chr5_-_19563832 1.02 AT5G48250.1
BBX8
B-box type zinc finger protein with CCT domain-containing protein
Chr1_-_22417244 1.02 AT1G60890.2
AT1G60890.1
AT1G60890
Phosphatidylinositol-4-phosphate 5-kinase family protein
Chr4_-_18370698 1.02 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
Chr4_-_1500100 1.02 AT4G03400.2
DFL2
Auxin-responsive GH3 family protein
Chr1_-_598657 1.02 AT1G02730.1
CSLD5
cellulose synthase-like D5
Chr4_-_450642 1.01 AT4G01030.1
AT4G01030
pentatricopeptide (PPR) repeat-containing protein
Chr3_+_4403355 1.01 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
Chr1_-_4857975 1.01 AT1G14210.1
AT1G14210
Ribonuclease T2 family protein
Chr5_-_18518909 1.00 AT5G45650.2
AT5G45650.1
AT5G45650
subtilase family protein
Chr1_-_26800483 1.00 AT1G71040.1
LPR2
Cupredoxin superfamily protein
Chr5_-_1624270 1.00 AT5G05480.1
AT5G05480
Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
Chr4_+_17512254 1.00 AT4G37210.1
AT4G37210.2
AT4G37210
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_7637832 1.00 AT2G17550.1
AT2G17550.2
TRM26
RB1-inducible coiled-coil protein
Chr1_-_28302571 1.00 AT1G75410.2
BLH3
BEL1-like homeodomain 3
Chr3_+_18840411 0.99 AT3G50700.1
IDD2
indeterminate(ID)-domain 2
Chr2_-_17336969 0.99 AT2G41560.4
ACA4
autoinhibited Ca(2+)-ATPase, isoform 4
Chr1_-_1147091 0.99 AT1G04280.1
AT1G04280.2
AT1G04280
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_29356346 0.99 AT1G78070.2
AT1G78070.3
AT1G78070
Transducin/WD40 repeat-like superfamily protein
Chr2_-_15783480 0.98 AT2G37630.1
AS1
myb-like HTH transcriptional regulator family protein
Chr1_+_3349082 0.98 AT1G10210.1
AT1G10210.3
AT1G10210.2
MPK1
mitogen-activated protein kinase 1
Chr5_-_25813620 0.98 AT5G64570.3
AT5G64570.2
AT5G64570.1
XYL4
beta-D-xylosidase 4
Chr3_+_15601754 0.98 AT3G43700.1
AT3G43700.2
AT3G43700.3
BPM6
BTB-POZ and MATH domain 6
Chr1_-_2339321 0.98 AT1G07600.1
AT1G07590.1
MT1A
AT1G07590
metallothionein 1A
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_5047376 0.98 AT3G14990.1
AT3G14990.3
DJ1A
Class I glutamine amidotransferase-like superfamily protein
Chr5_+_6006035 0.97 AT5G18170.1
GDH1
glutamate dehydrogenase 1
Chr1_+_18416474 0.97 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
Chr3_+_5047589 0.97 AT3G14990.2
DJ1A
Class I glutamine amidotransferase-like superfamily protein
Chr4_+_11941001 0.97 AT4G22730.2
AT4G22730.1
AT4G22730
Leucine-rich repeat protein kinase family protein
Chr2_+_15501726 0.96 AT2G36910.1
ABCB1
ATP binding cassette subfamily B1
Chr5_+_5548914 0.96 AT5G16880.1
AT5G16880.4
AT5G16880.2
AT5G16880.3
AT5G16880
Target of Myb protein 1
Chr4_-_14031049 0.96 AT4G28360.1
AT4G28360
Ribosomal protein L22p/L17e family protein
Chr3_-_3044919 0.96 AT3G09920.3
AT3G09920.1
AT3G09920.2
AT3G09920.4
PIP5K9
phosphatidyl inositol monophosphate 5 kinase
Chr3_-_19078955 0.96 AT3G51400.1
AT3G51400
hypothetical protein (DUF241)
Chr3_-_1238616 0.96 AT3G04580.1
AT3G04580.2
EIN4
Signal transduction histidine kinase, hybrid-type, ethylene sensor
Chr1_-_11258814 0.96 AT1G31440.1
AT1G31440
SH3 domain-containing protein
Chr1_-_40945 0.96 AT1G01070.2
AT1G01070.1
UMAMIT28
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_1188434 0.96 AT1G04400.2
CRY2
cryptochrome 2
Chr3_-_19914947 0.96 AT3G53740.4
AT3G53740.3
AT3G53740.1
AT3G53740.2
AT3G53740
Ribosomal protein L36e family protein
Chr3_+_9475350 0.95 AT3G25890.2
AT3G25890.1
CRF11
Integrase-type DNA-binding superfamily protein
Chr2_-_18811085 0.95 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
Chr1_-_10548140 0.95 AT1G30070.2
AT1G30070.1
AT1G30070
SGS domain-containing protein
Chr2_-_15092178 0.95 AT2G35940.2
BLH1
BEL1-like homeodomain 1
Chr1_+_27338034 0.95 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr2_-_15623104 0.95 AT2G37200.1
AT2G37200.2
AT2G37200
Uncharacterized protein family (UPF0497)
Chr1_+_21167565 0.95 AT1G56510.1
WRR4
Disease resistance protein (TIR-NBS-LRR class)
Chr2_+_18280580 0.95 AT2G44210.1
AT2G44210.2
AT2G44210
carboxyl-terminal peptidase (DUF239)
Chr1_-_1343793 0.95 AT1G04780.1
AT1G04780
Ankyrin repeat family protein
Chr1_-_1188696 0.95 AT1G04400.1
CRY2
cryptochrome 2
Chr5_+_2202364 0.94 AT5G07090.1
AT5G07090.3
AT5G07090.2
AT5G07090
Ribosomal protein S4 (RPS4A) family protein
Chr1_+_23515680 0.94 AT1G63420.1
AT1G63420.2
AT1G63420
O-glucosyltransferase-like protein (DUF821)
Chr1_+_270797 0.94 AT1G01730.1
AT1G01730
hypothetical protein
Chr1_+_26640565 0.94 AT1G70660.2
AT1G70660.1
MMZ2
MMS ZWEI homologue 2
Chr3_-_6172005 0.94 AT3G18035.1
AT3G18035.2
HON4
winged-helix DNA-binding transcription factor family protein
Chr1_-_9092560 0.94 AT1G26270.1
AT1G26270
Phosphatidylinositol 3- and 4-kinase family protein
Chr3_+_5203205 0.93 AT3G15410.1
AT3G15410.2
AT3G15410
Leucine-rich repeat (LRR) family protein
Chr4_-_18190556 0.93 AT4G39040.2
AT4G39040.1
AT4G39040
RNA-binding CRS1 / YhbY (CRM) domain protein
Chr5_+_23167774 0.93 AT5G57180.1
AT5G57180.2
AT5G57180.4
AT5G57180.3
CIA2
chloroplast import apparatus 2
Chr2_-_18666475 0.93 AT2G45260.1
AT2G45260
myosin-4 protein (DUF641)
Chr5_-_19899301 0.93 AT5G49100.1
AT5G49100
vitellogenin-like protein
Chr4_+_2816317 0.92 AT4G05530.1
IBR1
indole-3-butyric acid response 1
Chr2_+_16260803 0.92 AT2G38950.1
AT2G38950
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Chr5_-_6800903 0.92 AT5G20140.1
AT5G20140.2
HBP5
SOUL heme-binding family protein
Chr1_+_6886669 0.92 AT1G19850.1
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Chr5_+_21317130 0.92 AT5G52530.3
AT5G52530.2
AT5G52530.1
AT5G52530
dentin sialophosphoprotein-like protein
Chr4_+_12456342 0.92 AT4G23990.1
CSLG3
cellulose synthase like G3
Chr4_+_17554493 0.92 AT4G37300.1
MEE59
maternal effect embryo arrest 59
Chr3_-_23450195 0.92 AT3G63500.1
AT3G63500.3
AT3G63500.2
TTA2
fibronectin type III domain protein (DUF1423)
Chr2_-_17337492 0.92 AT2G41560.1
ACA4
autoinhibited Ca(2+)-ATPase, isoform 4
Chr3_+_19148871 0.92 AT3G51630.2
AT3G51630.1
WNK5
with no lysine (K) kinase 5
Chr5_+_20430453 0.92 AT5G50180.1
AT5G50180
Protein kinase superfamily protein
Chr4_-_1501599 0.91 AT4G03400.1
DFL2
Auxin-responsive GH3 family protein
Chr2_+_11058944 0.91 AT2G25930.1
ELF3
hydroxyproline-rich glycoprotein family protein
Chr3_-_9595283 0.91 AT3G26210.1
CYP71B23
cytochrome P450, family 71, subfamily B, polypeptide 23
Chr1_+_1231452 0.91 AT1G04520.1
PDLP2
plasmodesmata-located protein 2
Chr5_+_21661444 0.91 AT5G53400.1
BOB1
HSP20-like chaperones superfamily protein
Chr5_-_5018347 0.90 AT5G15450.1
CLPB3
casein lytic proteinase B3

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G13790

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 5.1 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
1.0 5.0 GO:0032410 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.8 2.5 GO:1902347 response to strigolactone(GO:1902347)
0.7 2.2 GO:0071281 cellular response to iron ion(GO:0071281)
0.7 2.0 GO:0072708 response to sorbitol(GO:0072708)
0.7 0.7 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.6 1.2 GO:0035865 cellular response to potassium ion(GO:0035865)
0.6 1.7 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.6 1.7 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.5 1.6 GO:0040030 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.5 1.9 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.4 1.7 GO:0019499 cyanide metabolic process(GO:0019499)
0.4 0.4 GO:1900407 regulation of cellular response to oxidative stress(GO:1900407)
0.4 2.0 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.4 1.2 GO:0035606 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.4 1.1 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.4 0.7 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.3 4.4 GO:0010044 response to aluminum ion(GO:0010044)
0.3 0.7 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.3 1.3 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.3 2.0 GO:0043480 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.3 0.6 GO:0072718 response to cisplatin(GO:0072718)
0.3 1.0 GO:0042908 xenobiotic transport(GO:0042908)
0.3 1.3 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.3 2.1 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.3 0.6 GO:0071258 cellular response to gravity(GO:0071258)
0.3 1.4 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.3 0.9 GO:0006750 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.3 0.8 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.3 1.4 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.3 0.6 GO:0015807 L-amino acid transport(GO:0015807)
0.3 0.8 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.3 1.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.3 0.8 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.3 0.8 GO:1901379 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.3 2.4 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.3 2.1 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.3 0.5 GO:0071158 regulation of cell cycle arrest(GO:0071156) positive regulation of cell cycle arrest(GO:0071158)
0.3 1.0 GO:0033306 phytol metabolic process(GO:0033306)
0.3 0.5 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.3 0.8 GO:0072388 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.3 2.5 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 1.5 GO:0022898 regulation of transmembrane transporter activity(GO:0022898) regulation of ion transmembrane transporter activity(GO:0032412)
0.2 0.7 GO:0051202 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.2 0.7 GO:0071485 cellular response to absence of light(GO:0071485)
0.2 0.5 GO:0006206 pyrimidine nucleobase metabolic process(GO:0006206) pyrimidine nucleobase biosynthetic process(GO:0019856)
0.2 0.7 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.2 0.9 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.2 1.1 GO:0019323 pentose catabolic process(GO:0019323)
0.2 0.7 GO:0010254 nectary development(GO:0010254)
0.2 0.7 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.2 1.1 GO:0010155 regulation of proton transport(GO:0010155)
0.2 0.7 GO:0019695 choline metabolic process(GO:0019695)
0.2 0.7 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 0.9 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.2 6.8 GO:0006012 galactose metabolic process(GO:0006012)
0.2 1.1 GO:0060919 auxin influx(GO:0060919)
0.2 0.6 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.2 4.6 GO:0007602 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.2 0.6 GO:0048873 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.2 1.0 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 0.8 GO:0016598 protein arginylation(GO:0016598)
0.2 0.4 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.2 0.8 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.2 2.8 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.2 0.6 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.2 0.4 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.2 0.8 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.2 2.6 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 0.6 GO:0009915 phloem sucrose loading(GO:0009915)
0.2 0.7 GO:0006225 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.2 1.8 GO:0009608 response to symbiont(GO:0009608)
0.2 1.5 GO:0061727 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.2 0.4 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.2 0.7 GO:0016139 glycoside catabolic process(GO:0016139)
0.2 1.2 GO:0045899 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.2 0.5 GO:0019483 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.2 0.9 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.2 1.9 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.2 0.3 GO:0009590 detection of gravity(GO:0009590)
0.2 1.4 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 0.5 GO:0002100 tRNA wobble adenosine to inosine editing(GO:0002100)
0.2 0.7 GO:0046479 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.2 2.2 GO:0048317 seed morphogenesis(GO:0048317)
0.2 0.5 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.2 1.7 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.2 0.8 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.2 1.0 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.7 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.2 0.3 GO:0017145 stem cell division(GO:0017145)
0.2 4.1 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.2 0.7 GO:0035494 SNARE complex disassembly(GO:0035494)
0.2 1.8 GO:0030308 negative regulation of cell growth(GO:0030308)
0.2 0.5 GO:0034963 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.2 0.5 GO:0051601 exocyst localization(GO:0051601)
0.2 0.6 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.2 0.5 GO:1990069 stomatal opening(GO:1990069)
0.2 1.2 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.2 1.1 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.2 0.3 GO:0010376 stomatal complex formation(GO:0010376)
0.1 0.4 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.1 1.2 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.9 GO:0046683 response to organophosphorus(GO:0046683)
0.1 1.6 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 0.6 GO:0043092 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938) L-alpha-amino acid transmembrane transport(GO:1902475)
0.1 5.0 GO:0006730 one-carbon metabolic process(GO:0006730)
0.1 0.3 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 1.9 GO:0006265 DNA topological change(GO:0006265)
0.1 1.9 GO:0031053 primary miRNA processing(GO:0031053)
0.1 0.6 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.1 0.6 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.7 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.1 2.4 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.1 0.4 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.4 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 1.5 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 0.6 GO:0009557 antipodal cell differentiation(GO:0009557)
0.1 0.4 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.1 0.8 GO:0010338 leaf formation(GO:0010338)
0.1 0.4 GO:0051194 positive regulation of cofactor metabolic process(GO:0051194) positive regulation of tetrapyrrole metabolic process(GO:1901403)
0.1 0.4 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 1.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 0.9 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 1.2 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 1.3 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1 0.4 GO:0018065 protein-cofactor linkage(GO:0018065)
0.1 0.9 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 1.2 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 0.9 GO:0043066 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.1 0.9 GO:0016120 carotene biosynthetic process(GO:0016120)
0.1 1.3 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 1.4 GO:0042727 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231) flavin-containing compound biosynthetic process(GO:0042727)
0.1 1.4 GO:0044070 regulation of anion transport(GO:0044070)
0.1 0.8 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 3.3 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.5 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.1 2.4 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.5 GO:0048480 stigma development(GO:0048480)
0.1 0.6 GO:1904589 regulation of protein import(GO:1904589)
0.1 0.5 GO:0010219 regulation of vernalization response(GO:0010219)
0.1 0.7 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 2.0 GO:0000919 cell plate assembly(GO:0000919)
0.1 0.7 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 0.4 GO:0010269 response to selenium ion(GO:0010269)
0.1 0.6 GO:0071493 cellular response to UV-B(GO:0071493)
0.1 0.9 GO:0016584 nucleosome positioning(GO:0016584) negative regulation of chromatin silencing(GO:0031936)
0.1 1.0 GO:0005513 detection of calcium ion(GO:0005513)
0.1 2.3 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 1.6 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.3 GO:0043132 NAD transport(GO:0043132)
0.1 0.7 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 0.7 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 0.3 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 0.4 GO:0019627 urea metabolic process(GO:0019627)
0.1 0.8 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.1 0.3 GO:0051639 actin filament network formation(GO:0051639)
0.1 1.0 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 0.6 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.1 0.6 GO:0080036 regulation of cytokinin-activated signaling pathway(GO:0080036)
0.1 0.5 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.5 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.1 0.9 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.1 0.6 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.1 0.4 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 0.3 GO:0019320 hexose catabolic process(GO:0019320)
0.1 0.3 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.6 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.5 GO:0070863 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.1 0.8 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.3 GO:0045793 positive regulation of cell size(GO:0045793)
0.1 1.5 GO:0009638 phototropism(GO:0009638)
0.1 4.4 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.1 2.5 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.1 1.2 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.1 0.4 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.1 0.6 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.3 GO:0006527 arginine catabolic process(GO:0006527)
0.1 0.9 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 1.1 GO:0006825 copper ion transport(GO:0006825)
0.1 0.5 GO:0042659 regulation of cell fate specification(GO:0042659)
0.1 0.9 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.3 GO:0046521 sphingoid catabolic process(GO:0046521)
0.1 0.6 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 0.6 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 0.3 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 0.5 GO:0071731 response to nitric oxide(GO:0071731)
0.1 0.3 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 0.3 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.8 GO:0010315 auxin efflux(GO:0010315)
0.1 0.1 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.1 0.8 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 1.1 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 0.3 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.3 GO:0080093 regulation of photorespiration(GO:0080093)
0.1 1.5 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.1 0.5 GO:0042816 vitamin B6 metabolic process(GO:0042816)
0.1 0.2 GO:1903829 positive regulation of protein transport(GO:0051222) positive regulation of intracellular protein transport(GO:0090316) positive regulation of cytoplasmic transport(GO:1903651) positive regulation of cellular protein localization(GO:1903829) positive regulation of establishment of protein localization(GO:1904951)
0.1 1.9 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 0.4 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.5 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 1.8 GO:0010207 photosystem II assembly(GO:0010207)
0.1 3.0 GO:0040034 regulation of development, heterochronic(GO:0040034)
0.1 2.2 GO:0090421 embryonic meristem initiation(GO:0090421)
0.1 3.9 GO:0034605 cellular response to heat(GO:0034605)
0.1 0.3 GO:0080005 photosystem stoichiometry adjustment(GO:0080005)
0.1 0.3 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 1.2 GO:0015976 carbon utilization(GO:0015976)
0.1 0.3 GO:0044380 protein localization to cytoskeleton(GO:0044380) anisotropic cell growth(GO:0051211) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.9 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.1 0.5 GO:0009819 drought recovery(GO:0009819)
0.1 0.2 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.1 1.0 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.1 0.4 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.1 0.7 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 0.3 GO:0000023 maltose metabolic process(GO:0000023)
0.1 0.9 GO:1901070 guanosine-containing compound biosynthetic process(GO:1901070)
0.1 0.7 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 0.7 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 0.3 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 1.2 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.1 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.4 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 1.8 GO:0090333 regulation of stomatal closure(GO:0090333)
0.1 0.3 GO:0009643 photosynthetic acclimation(GO:0009643)
0.1 0.7 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 0.3 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 1.6 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.1 1.0 GO:0018198 peptidyl-cysteine modification(GO:0018198) peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.1 GO:0002188 translation reinitiation(GO:0002188)
0.1 1.7 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.1 2.6 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 0.2 GO:0010394 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.1 0.8 GO:0044804 nucleophagy(GO:0044804)
0.1 0.1 GO:0071277 cellular response to calcium ion(GO:0071277)
0.1 0.3 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.1 0.2 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.9 GO:0006574 valine catabolic process(GO:0006574)
0.1 0.6 GO:0000731 DNA synthesis involved in DNA repair(GO:0000731)
0.1 1.4 GO:0008356 asymmetric cell division(GO:0008356)
0.1 0.3 GO:0015867 ADP transport(GO:0015866) ATP transport(GO:0015867) AMP transport(GO:0080121)
0.1 1.3 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.1 0.4 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.1 0.7 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.2 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.1 0.5 GO:0010098 suspensor development(GO:0010098)
0.1 1.9 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.6 GO:0051262 protein tetramerization(GO:0051262)
0.1 0.2 GO:0048863 stem cell differentiation(GO:0048863)
0.1 0.3 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 0.7 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 0.2 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.6 GO:0043486 histone exchange(GO:0043486)
0.1 1.1 GO:0005977 glycogen metabolic process(GO:0005977) energy reserve metabolic process(GO:0006112)
0.1 1.2 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 2.5 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.3 GO:0007142 male meiosis II(GO:0007142)
0.1 5.6 GO:0018105 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.1 1.2 GO:0090630 activation of GTPase activity(GO:0090630)
0.1 0.2 GO:0070509 calcium ion import(GO:0070509)
0.1 0.3 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 0.3 GO:0034508 centromere complex assembly(GO:0034508)
0.1 1.8 GO:0051028 mRNA export from nucleus(GO:0006406) mRNA transport(GO:0051028) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427)
0.1 2.4 GO:0006338 chromatin remodeling(GO:0006338)
0.1 0.5 GO:0006379 mRNA cleavage(GO:0006379)
0.1 0.6 GO:0006308 DNA catabolic process(GO:0006308)
0.1 0.7 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.6 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 0.4 GO:0010161 red light signaling pathway(GO:0010161)
0.1 0.3 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.1 0.5 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.1 0.7 GO:0045493 xylan catabolic process(GO:0045493)
0.1 0.3 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.1 GO:0032196 transposition(GO:0032196)
0.1 0.7 GO:0043248 proteasome assembly(GO:0043248)
0.1 0.7 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.2 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0 0.1 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.2 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.0 0.7 GO:0009112 nucleobase metabolic process(GO:0009112)
0.0 0.4 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.4 GO:0043967 histone H4 acetylation(GO:0043967)
0.0 3.7 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.2 GO:0019405 alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
0.0 1.6 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.5 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.3 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 1.3 GO:0080022 primary root development(GO:0080022)
0.0 0.2 GO:2000014 regulation of endosperm development(GO:2000014)
0.0 0.9 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 1.0 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.0 0.3 GO:0000478 endonucleolytic cleavage involved in rRNA processing(GO:0000478)
0.0 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.2 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.4 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.0 0.3 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654) phosphatidic acid metabolic process(GO:0046473)
0.0 0.6 GO:0046352 disaccharide catabolic process(GO:0046352)
0.0 0.3 GO:0010050 vegetative phase change(GO:0010050)
0.0 1.0 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.7 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 1.0 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.9 GO:0055072 iron ion homeostasis(GO:0055072)
0.0 2.8 GO:0009742 brassinosteroid mediated signaling pathway(GO:0009742) steroid hormone mediated signaling pathway(GO:0043401) cellular response to steroid hormone stimulus(GO:0071383)
0.0 0.2 GO:0090202 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.0 0.2 GO:0000966 RNA 5'-end processing(GO:0000966)
0.0 0.2 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.6 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.2 GO:0034644 cellular response to UV(GO:0034644)
0.0 0.5 GO:0051443 positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.0 0.1 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 1.6 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.2 GO:0010358 leaf shaping(GO:0010358)
0.0 0.6 GO:0097031 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.7 GO:0046838 phosphorylated carbohydrate dephosphorylation(GO:0046838)
0.0 0.2 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.0 0.8 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.4 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 1.0 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 1.1 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.9 GO:0071462 cellular response to water stimulus(GO:0071462)
0.0 0.1 GO:0051098 regulation of binding(GO:0051098)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 1.2 GO:0042255 ribosome assembly(GO:0042255)
0.0 0.7 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 1.5 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 2.5 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 2.7 GO:0009658 chloroplast organization(GO:0009658)
0.0 0.2 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.0 0.3 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.6 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.0 0.3 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.0 0.3 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.4 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.3 GO:0007105 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.0 1.1 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 0.8 GO:0042026 protein refolding(GO:0042026)
0.0 0.2 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.4 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.1 GO:0015691 cadmium ion transport(GO:0015691)
0.0 0.7 GO:0009395 phospholipid catabolic process(GO:0009395)
0.0 0.9 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.5 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.2 GO:0009745 sucrose mediated signaling(GO:0009745)
0.0 0.1 GO:1990641 response to iron ion starvation(GO:1990641)
0.0 0.1 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.0 0.2 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.2 GO:0071941 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128) nitrogen cycle metabolic process(GO:0071941)
0.0 0.1 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.2 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.2 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.1 GO:0090113 regulation of COPII vesicle coating(GO:0003400) vesicle targeting, rough ER to cis-Golgi(GO:0048207) COPII vesicle coating(GO:0048208) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
0.0 0.8 GO:0000911 cytokinesis by cell plate formation(GO:0000911) cytokinetic process(GO:0032506) mitotic cytokinetic process(GO:1902410)
0.0 0.1 GO:0010507 negative regulation of autophagy(GO:0010507)
0.0 0.2 GO:0050777 negative regulation of immune response(GO:0050777)
0.0 1.0 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.0 0.3 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 1.3 GO:0022406 membrane docking(GO:0022406)
0.0 0.2 GO:0016925 protein sumoylation(GO:0016925)
0.0 1.4 GO:0043067 regulation of programmed cell death(GO:0043067)
0.0 1.7 GO:0009411 response to UV(GO:0009411)
0.0 0.2 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.0 0.3 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 0.2 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.0 0.2 GO:0009404 toxin metabolic process(GO:0009404)
0.0 0.5 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.4 GO:0006914 autophagy(GO:0006914)
0.0 0.1 GO:0051452 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.0 5.1 GO:0046686 response to cadmium ion(GO:0046686)
0.0 0.0 GO:0007569 cell aging(GO:0007569) regulation of cell aging(GO:0090342)
0.0 0.1 GO:0046203 spermidine catabolic process(GO:0046203)
0.0 0.1 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.0 0.2 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.0 18.6 GO:0006468 protein phosphorylation(GO:0006468)
0.0 0.4 GO:0051170 nuclear import(GO:0051170)
0.0 0.1 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.4 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.2 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.0 0.2 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.2 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0 0.2 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 0.3 GO:0010229 inflorescence development(GO:0010229)
0.0 0.8 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.0 0.6 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.0 0.7 GO:0046939 nucleotide phosphorylation(GO:0046939)
0.0 0.2 GO:0000963 mitochondrial RNA processing(GO:0000963)
0.0 0.1 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.2 GO:1902182 shoot apical meristem development(GO:1902182) regulation of shoot apical meristem development(GO:1902183)
0.0 0.6 GO:0048825 cotyledon development(GO:0048825)
0.0 0.2 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.3 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.2 GO:0032886 regulation of microtubule-based process(GO:0032886)
0.0 0.1 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.1 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.2 GO:0030091 protein repair(GO:0030091)
0.0 0.1 GO:0006491 N-glycan processing(GO:0006491)
0.0 0.4 GO:0051225 spindle assembly(GO:0051225)
0.0 0.1 GO:0033383 geranyl diphosphate metabolic process(GO:0033383) geranyl diphosphate biosynthetic process(GO:0033384)
0.0 0.3 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.3 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 0.5 GO:0006401 RNA catabolic process(GO:0006401)
0.0 0.3 GO:0006614 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.0 0.3 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.0 0.1 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.0 0.2 GO:0009086 methionine biosynthetic process(GO:0009086)
0.0 0.1 GO:0000373 Group II intron splicing(GO:0000373)
0.0 3.6 GO:0006412 translation(GO:0006412)
0.0 0.0 GO:1903313 positive regulation of RNA splicing(GO:0033120) positive regulation of mRNA processing(GO:0050685) positive regulation of mRNA metabolic process(GO:1903313)
0.0 0.2 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.0 GO:0090114 localization within membrane(GO:0051668) COPII-coated vesicle budding(GO:0090114)
0.0 0.2 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 0.1 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.1 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.2 GO:0043235 receptor complex(GO:0043235)
0.5 2.1 GO:0031356 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.4 2.1 GO:0010007 magnesium chelatase complex(GO:0010007)
0.4 1.1 GO:0031897 Tic complex(GO:0031897)
0.3 3.1 GO:0030904 retromer complex(GO:0030904)
0.3 5.5 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.2 1.8 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.2 1.3 GO:0017053 transcriptional repressor complex(GO:0017053)
0.2 2.3 GO:0031519 PcG protein complex(GO:0031519)
0.2 0.8 GO:0042788 polysomal ribosome(GO:0042788)
0.2 0.9 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.2 3.6 GO:0031354 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.2 0.7 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.2 0.5 GO:0016328 lateral plasma membrane(GO:0016328)
0.2 1.0 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.2 0.5 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.2 1.1 GO:0031298 replication fork protection complex(GO:0031298)
0.2 1.4 GO:0010445 nuclear dicing body(GO:0010445)
0.1 0.7 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.6 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.1 0.6 GO:0043614 multi-eIF complex(GO:0043614)
0.1 0.9 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 1.3 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 0.5 GO:0008278 cohesin complex(GO:0008278)
0.1 0.6 GO:0034657 GID complex(GO:0034657)
0.1 0.9 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 2.4 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.7 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 2.0 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 0.4 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.3 GO:0032432 actin filament bundle(GO:0032432)
0.1 2.4 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 1.2 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 0.2 GO:0044462 cell wall part(GO:0044426) external encapsulating structure part(GO:0044462)
0.1 0.4 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 1.0 GO:0015030 Cajal body(GO:0015030)
0.1 0.6 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.2 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.1 0.8 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.1 1.6 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 0.5 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.5 GO:0000796 condensin complex(GO:0000796)
0.1 7.0 GO:0016604 nuclear body(GO:0016604)
0.1 0.6 GO:0051233 spindle midzone(GO:0051233)
0.1 0.3 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.1 1.0 GO:0010287 plastoglobule(GO:0010287)
0.1 0.4 GO:0030141 secretory granule(GO:0030141)
0.1 1.9 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 0.8 GO:0035861 site of double-strand break(GO:0035861)
0.1 2.0 GO:0000118 histone deacetylase complex(GO:0000118)
0.1 0.2 GO:0009513 etioplast(GO:0009513)
0.1 0.2 GO:0005652 nuclear lamina(GO:0005652)
0.1 0.4 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.1 1.2 GO:0031970 organelle envelope lumen(GO:0031970)
0.1 0.6 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 1.2 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 1.2 GO:0009531 secondary cell wall(GO:0009531)
0.1 0.6 GO:0030127 COPII vesicle coat(GO:0030127)
0.1 0.3 GO:0009509 chromoplast(GO:0009509)
0.1 3.0 GO:0042646 plastid nucleoid(GO:0042646)
0.1 3.4 GO:0005875 microtubule associated complex(GO:0005875)
0.1 0.9 GO:0000786 nucleosome(GO:0000786) DNA packaging complex(GO:0044815)
0.1 2.6 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 0.4 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 0.5 GO:0070531 BRCA1-A complex(GO:0070531)
0.1 0.2 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.1 0.6 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 0.4 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 0.2 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.6 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 0.5 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.1 0.5 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.1 1.2 GO:0005761 mitochondrial ribosome(GO:0005761)
0.1 0.2 GO:0034719 pICln-Sm protein complex(GO:0034715) SMN-Sm protein complex(GO:0034719)
0.1 0.3 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.3 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.3 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.6 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.7 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0 0.8 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.2 GO:0030663 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.0 0.4 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 0.5 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.9 GO:0008023 transcription elongation factor complex(GO:0008023)
0.0 0.6 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 5.5 GO:0000790 nuclear chromatin(GO:0000790)
0.0 1.0 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.4 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.0 2.0 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 0.5 GO:0005839 proteasome core complex(GO:0005839)
0.0 1.4 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.0 2.0 GO:0010008 endosome membrane(GO:0010008)
0.0 0.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 5.0 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.4 GO:0042651 thylakoid membrane(GO:0042651)
0.0 0.5 GO:0045298 tubulin complex(GO:0045298)
0.0 1.3 GO:0009504 cell plate(GO:0009504)
0.0 0.3 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.9 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.6 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.4 GO:0017119 Golgi transport complex(GO:0017119)
0.0 1.9 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.9 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.1 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.0 0.3 GO:0098562 cytoplasmic side of membrane(GO:0098562)
0.0 0.2 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.1 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.0 0.1 GO:0031977 thylakoid lumen(GO:0031977)
0.0 0.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.2 GO:0000347 THO complex(GO:0000347)
0.0 0.6 GO:0009574 preprophase band(GO:0009574)
0.0 0.3 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 3.2 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.3 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 2.9 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.3 GO:0031209 SCAR complex(GO:0031209)
0.0 0.2 GO:0072686 mitotic spindle(GO:0072686)
0.0 1.2 GO:0005770 late endosome(GO:0005770)
0.0 0.4 GO:0045273 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.0 0.3 GO:0005753 mitochondrial proton-transporting ATP synthase complex(GO:0005753)
0.0 0.1 GO:0009897 external side of plasma membrane(GO:0009897)
0.0 1.8 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.5 GO:0000793 condensed chromosome(GO:0000793)
0.0 2.3 GO:0043656 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.9 GO:0000323 lytic vacuole(GO:0000323)
0.0 0.2 GO:0005769 early endosome(GO:0005769)
0.0 0.3 GO:0048475 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.0 2.5 GO:1990204 oxidoreductase complex(GO:1990204)
0.0 0.3 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.7 GO:0031201 SNARE complex(GO:0031201)
0.0 0.1 GO:0000314 organellar small ribosomal subunit(GO:0000314)
0.0 1.3 GO:0042170 plastid membrane(GO:0042170)
0.0 0.8 GO:0016592 mediator complex(GO:0016592)
0.0 3.1 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 0.3 GO:0009524 phragmoplast(GO:0009524)
0.0 10.2 GO:0005773 vacuole(GO:0005773)
0.0 1.2 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.4 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 3.7 GO:0005802 trans-Golgi network(GO:0005802)
0.0 53.7 GO:0005886 plasma membrane(GO:0005886)
0.0 0.1 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.2 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 2.7 GO:0009532 plastid stroma(GO:0009532)
0.0 0.3 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 24.1 GO:0005829 cytosol(GO:0005829)
0.0 0.2 GO:0032040 small-subunit processome(GO:0032040)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.5 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.8 7.5 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.7 3.0 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.5 4.9 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.5 1.9 GO:0019172 glyoxalase III activity(GO:0019172)
0.4 1.3 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.4 1.7 GO:0008301 DNA binding, bending(GO:0008301)
0.4 1.7 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.4 1.2 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.4 2.3 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.4 2.1 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.3 1.4 GO:0008686 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.3 0.7 GO:0043566 structure-specific DNA binding(GO:0043566)
0.3 1.6 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.3 1.5 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.3 1.5 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.3 0.8 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.3 0.8 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.3 1.3 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.3 2.3 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.3 2.0 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.2 0.9 GO:0019156 isoamylase activity(GO:0019156)
0.2 0.7 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.2 0.5 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.2 1.6 GO:0008022 protein C-terminus binding(GO:0008022)
0.2 0.6 GO:0019776 Atg8 ligase activity(GO:0019776)
0.2 0.8 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 2.5 GO:0047893 flavonol 3-O-glucosyltransferase activity(GO:0047893)
0.2 0.6 GO:0015026 coreceptor activity(GO:0015026)
0.2 0.8 GO:0004057 arginyltransferase activity(GO:0004057)
0.2 0.8 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.2 2.2 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.2 1.0 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.2 1.6 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2 0.8 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 0.6 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.2 1.7 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.2 1.0 GO:0015446 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.2 0.6 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.2 2.5 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.2 0.8 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.2 0.9 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.2 1.3 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.2 0.6 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.2 0.7 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.2 0.9 GO:0016531 copper chaperone activity(GO:0016531)
0.2 0.7 GO:0033862 UMP kinase activity(GO:0033862)
0.2 0.7 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.2 0.9 GO:0030371 translation repressor activity(GO:0030371)
0.2 0.9 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.2 0.9 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.2 0.5 GO:0000824 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
0.2 0.8 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.2 1.0 GO:0051723 protein methylesterase activity(GO:0051723)
0.2 0.7 GO:0004348 glucosylceramidase activity(GO:0004348)
0.2 0.7 GO:0000035 acyl binding(GO:0000035)
0.2 1.8 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.2 1.0 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.2 1.1 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.2 0.5 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.2 1.1 GO:0004567 beta-mannosidase activity(GO:0004567)
0.2 0.5 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.2 0.6 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.2 1.7 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.2 2.2 GO:0016307 phosphatidylinositol phosphate kinase activity(GO:0016307)
0.1 0.6 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 0.9 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 0.4 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.1 2.3 GO:0035064 methylated histone binding(GO:0035064)
0.1 1.2 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.6 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.1 0.6 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 1.8 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.7 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.5 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.1 0.8 GO:0002020 protease binding(GO:0002020)
0.1 1.9 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.4 GO:0004359 glutaminase activity(GO:0004359)
0.1 0.1 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.1 0.5 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.7 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 0.5 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 0.3 GO:0046870 cadmium ion binding(GO:0046870)
0.1 1.2 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.1 1.2 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.4 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.1 0.6 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.8 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 0.6 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 0.5 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.1 2.4 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 2.9 GO:0008143 poly(A) binding(GO:0008143)
0.1 3.9 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 1.8 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 0.7 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 2.0 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.5 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.6 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.7 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 4.4 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 4.2 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.1 1.3 GO:0005402 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.1 0.3 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.1 0.7 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 1.1 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1 1.1 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.1 1.1 GO:0070300 phosphatidic acid binding(GO:0070300)
0.1 0.3 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.1 0.7 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.3 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.3 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.1 0.5 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 0.3 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.1 0.7 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.6 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.7 GO:0004806 triglyceride lipase activity(GO:0004806)
0.1 1.5 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.3 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.1 0.8 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 2.6 GO:0016597 amino acid binding(GO:0016597)
0.1 0.9 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 1.4 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.1 1.8 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 1.2 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 1.2 GO:0004017 adenylate kinase activity(GO:0004017)
0.1 0.6 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 0.9 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.1 0.3 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 0.7 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.1 1.0 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.1 1.4 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 0.4 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 1.2 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.7 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.1 0.9 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.7 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.1 1.1 GO:0043424 protein histidine kinase binding(GO:0043424)
0.1 1.6 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.3 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 1.8 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.1 0.8 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 0.9 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.2 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 0.5 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.8 GO:0003916 DNA topoisomerase activity(GO:0003916)
0.1 0.4 GO:0000702 oxidized base lesion DNA N-glycosylase activity(GO:0000702)
0.1 4.2 GO:0010857 calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.1 0.4 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.1 0.3 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 2.1 GO:0097602 cullin family protein binding(GO:0097602)
0.1 1.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.1 1.2 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.1 1.9 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 0.4 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 2.4 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.1 0.9 GO:2001070 starch binding(GO:2001070)
0.1 0.6 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.3 GO:0004324 ferredoxin-NADP+ reductase activity(GO:0004324)
0.1 0.3 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.1 0.7 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.3 GO:0051184 cofactor transporter activity(GO:0051184)
0.1 1.0 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.3 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.1 3.8 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 0.2 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 0.4 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 0.3 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.9 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 0.3 GO:0047780 citrate dehydratase activity(GO:0047780)
0.1 0.4 GO:0016151 nickel cation binding(GO:0016151)
0.1 1.2 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 0.3 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 2.3 GO:0004707 MAP kinase activity(GO:0004707)
0.1 0.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 0.2 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.1 3.1 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.1 0.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.4 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.8 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.2 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 0.4 GO:0004177 aminopeptidase activity(GO:0004177)
0.1 0.2 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.4 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.1 4.2 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 0.2 GO:0004774 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 0.2 GO:0097617 annealing activity(GO:0097617)
0.1 1.3 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.4 GO:0004834 tryptophan synthase activity(GO:0004834)
0.1 0.4 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.1 0.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.3 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.3 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 1.3 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.4 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.1 0.2 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 2.8 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.1 0.5 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.3 GO:0005088 Ras guanyl-nucleotide exchange factor activity(GO:0005088)
0.0 0.2 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.0 2.0 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.3 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.2 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.0 0.5 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.2 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.0 0.9 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.6 GO:1902936 phosphatidylinositol bisphosphate binding(GO:1902936)
0.0 2.6 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.4 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.6 GO:0080161 auxin efflux transmembrane transporter activity(GO:0010329) auxin transmembrane transporter activity(GO:0080161)
0.0 0.2 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.2 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.3 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 2.2 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 1.6 GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor(GO:0016620)
0.0 2.8 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 1.8 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.7 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.0 0.2 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.0 0.1 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.0 0.9 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.3 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.6 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.3 GO:0051117 ATPase binding(GO:0051117)
0.0 1.5 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.5 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.6 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.2 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.9 GO:0060090 binding, bridging(GO:0060090)
0.0 0.1 GO:0010280 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.0 0.4 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.1 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.1 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.0 0.2 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.5 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.3 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.4 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 1.3 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.4 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 1.6 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.4 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 3.9 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.4 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.4 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 1.0 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 7.4 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.6 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 0.2 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.0 0.4 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.4 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 19.8 GO:0004672 protein kinase activity(GO:0004672)
0.0 0.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.2 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.0 14.3 GO:0008270 zinc ion binding(GO:0008270)
0.0 0.9 GO:0016854 racemase and epimerase activity(GO:0016854)
0.0 1.1 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.0 0.5 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.4 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.3 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 1.3 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.4 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.3 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.9 GO:0003697 single-stranded DNA binding(GO:0003697)
0.0 0.9 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.1 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.0 1.2 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.6 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 3.7 GO:0043531 ADP binding(GO:0043531)
0.0 0.5 GO:0004888 transmembrane signaling receptor activity(GO:0004888)
0.0 0.9 GO:0008170 N-methyltransferase activity(GO:0008170)
0.0 0.1 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.0 0.4 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 1.0 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.5 GO:0004520 endodeoxyribonuclease activity(GO:0004520)
0.0 0.3 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.2 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 0.1 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.0 1.1 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.0 0.1 GO:0030975 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.0 1.2 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.3 GO:0030276 clathrin binding(GO:0030276)
0.0 1.0 GO:0000149 SNARE binding(GO:0000149)
0.0 1.7 GO:0051015 actin filament binding(GO:0051015)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.4 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.1 GO:0005047 signal recognition particle binding(GO:0005047)
0.0 0.1 GO:0008936 nicotinamidase activity(GO:0008936)
0.0 0.1 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 0.1 GO:0003680 AT DNA binding(GO:0003680)
0.0 4.9 GO:0016887 ATPase activity(GO:0016887)
0.0 0.3 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.2 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.2 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.0 0.2 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.0 0.2 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 0.1 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.0 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.0 0.2 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 1.7 GO:0008236 serine-type peptidase activity(GO:0008236) serine hydrolase activity(GO:0017171)
0.0 0.3 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.0 0.1 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.2 GO:0102391 acyl-CoA ligase activity(GO:0003996) long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.0 0.1 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 1.6 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 1.6 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 1.3 GO:0003682 chromatin binding(GO:0003682)
0.0 0.4 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.2 GO:0004222 metalloendopeptidase activity(GO:0004222)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.5 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.2 1.0 PID S1P S1P1 PATHWAY S1P1 pathway
0.2 0.9 PID BARD1 PATHWAY BARD1 signaling events
0.2 0.5 PID RAS PATHWAY Regulation of Ras family activation
0.1 0.7 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.1 0.6 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.1 0.7 PID PLK1 PATHWAY PLK1 signaling events
0.1 0.8 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.6 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly
0.1 0.3 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.1 0.5 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.2 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.1 0.2 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0 0.3 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.1 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.0 0.2 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.1 ST FAS SIGNALING PATHWAY Fas Signaling Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.5 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.4 1.2 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.3 1.0 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.7 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.2 0.7 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.2 0.7 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.2 1.7 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.1 0.5 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.1 0.6 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.1 0.3 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.1 0.4 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 1.2 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.1 0.4 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.1 0.3 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.1 0.2 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.0 1.6 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.2 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.0 REACTOME TRANS GOLGI NETWORK VESICLE BUDDING Genes involved in trans-Golgi Network Vesicle Budding
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.1 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.0 0.3 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins