Project
GSE130291:vernalization in Arabidopsis thaliana
Navigation
Downloads
Results for AT5G10510
Z-value: 0.97
Transcription factors associated with AT5G10510
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT5G10510
|
AT5G10510 | AINTEGUMENTA-like 6 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| AIL6 | arTal_v1_Chr5_+_3315401_3315529 | -0.70 | 5.0e-03 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| arTal_v1_Chr3_-_7656053_7656053 Show fit | 1.43 |
AT3G21720.1
|
isocitrate lyase |
|
| arTal_v1_Chr4_-_3065294_3065294 Show fit | 1.33 |
AT4G06477.1
|
|
|
| arTal_v1_Chr2_+_3618058_3618058 Show fit | 1.32 |
AT2G08986.1
|
hypothetical protein |
|
| arTal_v1_Chr1_+_6697874_6697874 Show fit | 1.28 |
AT1G19380.1
|
sugar, putative (DUF1195) |
|
| arTal_v1_Chr4_-_13460105_13460105 Show fit | 0.92 |
AT4G26690.1
|
PLC-like phosphodiesterase family protein |
|
| arTal_v1_Chr5_-_1034686_1034686 Show fit | 0.85 |
AT5G03860.1
|
malate synthase |
|
| arTal_v1_Chr5_-_1034973_1034973 Show fit | 0.83 |
AT5G03860.2
|
malate synthase |
|
| arTal_v1_Chr4_-_3950602_3950602 Show fit | 0.82 |
AT4G06700.1
|
|
|
| arTal_v1_Chr5_+_20820068_20820068 Show fit | 0.81 |
AT5G51210.1
|
oleosin3 |
|
| arTal_v1_Chr5_+_11701226_11701226 Show fit | 0.77 |
AT5G31770.1
|
|
Network of associatons between targets according to the STRING database.
First level regulatory network of AT5G10510
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.8 | 3.1 | GO:0006097 | glyoxylate cycle(GO:0006097) |
| 0.1 | 2.6 | GO:0009556 | microsporogenesis(GO:0009556) |
| 0.0 | 1.0 | GO:0009833 | plant-type primary cell wall biogenesis(GO:0009833) |
| 0.1 | 0.9 | GO:0010052 | guard cell differentiation(GO:0010052) |
| 0.0 | 0.8 | GO:0019915 | lipid storage(GO:0019915) |
| 0.1 | 0.6 | GO:0046937 | phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849) |
| 0.0 | 0.6 | GO:0052317 | camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317) |
| 0.2 | 0.5 | GO:0010124 | phenylacetate catabolic process(GO:0010124) |
| 0.1 | 0.5 | GO:0048281 | inflorescence morphogenesis(GO:0048281) |
| 0.1 | 0.5 | GO:0048533 | sporocyte differentiation(GO:0048533) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.5 | 1.4 | GO:0009514 | glyoxysome(GO:0009514) |
| 0.0 | 0.5 | GO:0000145 | exocyst(GO:0000145) |
| 0.0 | 0.4 | GO:0000148 | 1,3-beta-D-glucan synthase complex(GO:0000148) |
| 0.1 | 0.3 | GO:0048476 | Holliday junction resolvase complex(GO:0048476) |
| 0.1 | 0.2 | GO:0010330 | cellulose synthase complex(GO:0010330) |
| 0.0 | 0.1 | GO:0031932 | TORC2 complex(GO:0031932) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 1.6 | GO:0004650 | polygalacturonase activity(GO:0004650) |
| 0.1 | 1.4 | GO:0016833 | oxo-acid-lyase activity(GO:0016833) |
| 0.0 | 1.2 | GO:0016760 | cellulose synthase (UDP-forming) activity(GO:0016760) |
| 0.1 | 1.1 | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912) |
| 0.2 | 1.0 | GO:0008430 | selenium binding(GO:0008430) |
| 0.1 | 0.9 | GO:0008889 | glycerophosphodiester phosphodiesterase activity(GO:0008889) |
| 0.0 | 0.7 | GO:0004523 | RNA-DNA hybrid ribonuclease activity(GO:0004523) |
| 0.1 | 0.6 | GO:0034722 | gamma-glutamyl-peptidase activity(GO:0034722) |
| 0.1 | 0.6 | GO:0004838 | L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547) |
| 0.1 | 0.5 | GO:0003988 | acetyl-CoA C-acyltransferase activity(GO:0003988) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |