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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G09410

Z-value: 5.64

Transcription factors associated with AT5G09410

Gene Symbol Gene ID Gene Info
AT5G09410 ethylene induced calmodulin binding protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
EICBP.BarTal_v1_Chr5_+_2922332_2922332-0.451.1e-01Click!

Activity profile of AT5G09410 motif

Sorted Z-values of AT5G09410 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_6826587 11.32 AT4G11190.1
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_+_12686459 9.35 AT4G24570.1
dicarboxylate carrier 2
Chr5_+_6833564 8.91 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
Raffinose synthase family protein
Chr3_-_11194897 8.83 AT3G29250.2
AT3G29250.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_-_3420932 8.29 AT3G10930.1
hypothetical protein
Chr5_-_23308680 8.09 AT5G57560.1
Xyloglucan endotransglucosylase/hydrolase family protein
Chr5_-_14566439 8.00 AT5G36925.1
hypothetical protein
Chr2_-_10454591 7.90 AT2G24600.2
AT2G24600.3
AT2G24600.4
AT2G24600.1
Ankyrin repeat family protein
Chr3_+_11005638 7.84 AT3G29000.1
Calcium-binding EF-hand family protein
Chr1_-_9649323 7.46 AT1G27730.1
salt tolerance zinc finger
Chr3_+_21261046 7.18 AT3G57450.1
hypothetical protein
Chr1_-_9956960 7.15 AT1G28370.1
AT1G28370.2
ERF domain protein 11
Chr2_+_13677986 7.13 AT2G32210.3
AT2G32210.2
AT2G32210.1
cysteine-rich/transmembrane domain A-like protein
Chr3_-_11195171 7.07 AT3G29250.3
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_26772644 6.98 AT5G67080.1
mitogen-activated protein kinase kinase kinase 19
Chr2_-_17438168 6.95 AT2G41800.1
imidazolonepropionase (Protein of unknown function, DUF642)
Chr1_+_12851983 6.73 AT1G35140.1
Phosphate-responsive 1 family protein
Chr5_+_9683988 6.35 AT5G27420.1
carbon/nitrogen insensitive 1
Chr2_-_8533779 6.29 AT2G19800.1
myo-inositol oxygenase 2
Chr3_-_2130451 6.13 AT3G06750.1
hydroxyproline-rich glycoprotein family protein
Chr5_+_6826365 6.12 AT5G20230.1
blue-copper-binding protein
Chr2_+_12709721 6.08 AT2G29750.1
UDP-glucosyl transferase 71C1
Chr3_-_15953346 6.06 AT3G44260.1
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr3_+_9409160 6.04 AT3G25780.1
allene oxide cyclase 3
Chr1_+_11928757 6.02 AT1G32920.1
hypothetical protein
Chr3_+_16896166 5.97 AT3G45970.2
AT3G45970.1
expansin-like A1
Chr4_-_7786161 5.91 AT4G13395.1
ROTUNDIFOLIA like 12
Chr5_-_18371021 5.84 AT5G45340.2
AT5G45340.1
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr4_-_17777445 5.72 AT4G37800.1
xyloglucan endotransglucosylase/hydrolase 7
Chr1_+_17123785 5.69 AT1G45201.3
AT1G45201.1
AT1G45201.2
triacylglycerol lipase-like 1
Chr4_+_16354857 5.63 AT4G34150.1
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_4970311 5.62 AT1G14520.1
AT1G14520.3
AT1G14520.4
myo-inositol oxygenase 1
Chr4_+_11155453 5.54 AT4G20830.1
AT4G20830.2
FAD-binding Berberine family protein
Chr2_-_9538963 5.52 AT2G22470.1
arabinogalactan protein 2
Chr3_-_12451556 5.52 AT3G30775.2
AT3G30775.1
Methylenetetrahydrofolate reductase family protein
Chr5_+_3783930 5.46 AT5G11740.1
arabinogalactan protein 15
Chr5_-_37999 5.45 AT5G01100.1
O-fucosyltransferase family protein
Chr1_-_1662259 5.40 AT1G05575.1
transmembrane protein
Chr4_-_524249 5.39 AT4G01250.1
WRKY family transcription factor
Chr5_-_4986377 5.28 AT5G15350.1
early nodulin-like protein 17
Chr1_+_28746833 5.20 AT1G76600.1
poly polymerase
Chr1_+_11931149 5.19 AT1G32928.1
Avr9/Cf-9 rapidly elicited protein
Chr4_+_5740219 5.18 AT4G08950.1
Phosphate-responsive 1 family protein
Chr5_+_6470072 5.18 AT5G19240.1
Glycoprotein membrane precursor GPI-anchored
Chr4_+_10375244 5.12 AT4G18950.1
AT4G18950.2
Integrin-linked protein kinase family
Chr5_+_21352557 5.08 AT5G52640.1
heat shock-like protein
Chr5_-_14999619 5.06 AT5G37770.1
AT5G37770.2
EF hand calcium-binding protein family
Chr1_-_2190784 5.03 AT1G07135.1
glycine-rich protein
Chr2_+_11566288 5.03 AT2G27080.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr4_+_18185437 5.01 AT4G39030.1
MATE efflux family protein
Chr3_+_22142856 4.95 AT3G59940.1
Galactose oxidase/kelch repeat superfamily protein
Chr4_+_18519599 4.91 AT4G39940.1
APS-kinase 2
Chr2_-_7768040 4.82 AT2G17880.1
Chaperone DnaJ-domain superfamily protein
Chr1_+_24349399 4.81 AT1G65486.3
AT1G65486.4
AT1G65486.1
AT1G65486.2
transmembrane protein
Chr3_+_20776220 4.81 AT3G55980.2
AT3G55980.1
salt-inducible zinc finger 1
Chr5_+_3377652 4.81 AT5G10695.1
AT5G10695.2
methionyl-tRNA synthetase
Chr2_-_15014147 4.81 AT2G35710.3
AT2G35710.4
AT2G35710.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr5_+_5718498 4.80 AT5G17350.1
hypothetical protein
Chr3_-_10590685 4.78 AT3G28340.1
galacturonosyltransferase-like 10
Chr5_+_19179881 4.70 AT5G47230.1
ethylene responsive element binding factor 5
Chr2_-_10975916 4.67 AT2G25735.1
hypothetical protein
Chr5_-_4206458 4.64 AT5G13190.2
AT5G13190.1
GSH-induced LITAF domain protein
Chr3_+_21059785 4.59 AT3G56880.1
VQ motif-containing protein
Chr1_+_2927502 4.54 AT1G09070.1
soybean gene regulated by cold-2
Chr1_+_2025544 4.52 AT1G06620.1
AT1G06620.2
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_1931782 4.52 AT5G06320.1
NDR1/HIN1-like 3
Chr5_+_16202142 4.50 AT5G40460.1
cyclin-dependent kinase inhibitor SMR3-like protein
Chr1_-_8912642 4.49 AT1G25400.2
transmembrane protein
Chr3_+_16892702 4.47 AT3G45960.2
AT3G45960.1
expansin-like A3
Chr2_-_14740146 4.46 AT2G34930.1
disease resistance family protein / LRR family protein
Chr1_-_5129731 4.46 AT1G14870.1
PLANT CADMIUM RESISTANCE 2
Chr5_+_26266180 4.45 AT5G65690.1
AT5G65690.2
AT5G65690.3
AT5G65690.4
phosphoenolpyruvate carboxykinase 2
Chr1_-_5129523 4.44 AT1G14870.2
PLANT CADMIUM RESISTANCE 2
Chr1_-_27260291 4.44 AT1G72416.2
AT1G72416.5
AT1G72416.4
Chaperone DnaJ-domain superfamily protein
Chr5_-_25661007 4.42 AT5G64120.1
Peroxidase superfamily protein
Chr3_-_19427230 4.42 AT3G52400.1
syntaxin of plants 122
Chr5_+_16693832 4.41 AT5G41750.1
AT5G41750.2
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_-_8912822 4.40 AT1G25400.1
transmembrane protein
Chr2_-_2362149 4.37 AT2G06050.3
AT2G06050.2
oxophytodienoate-reductase 3
Chr4_+_13811612 4.32 AT4G27654.1
transmembrane protein
Chr4_-_17041131 4.32 AT4G36010.2
Pathogenesis-related thaumatin superfamily protein
Chr1_-_3241863 4.30 AT1G09950.1
RESPONSE TO ABA AND SALT 1
Chr4_-_17041326 4.29 AT4G36010.1
Pathogenesis-related thaumatin superfamily protein
Chr1_+_24637196 4.29 AT1G66160.2
AT1G66160.1
CYS, MET, PRO, and GLY protein 1
Chr2_+_18253610 4.23 AT2G44130.1
Galactose oxidase/kelch repeat superfamily protein
Chr2_-_14862178 4.22 AT2G35290.1
hypothetical protein
Chr2_-_9062093 4.21 AT2G21140.1
proline-rich protein 2
Chr1_-_27260521 4.19 AT1G72416.3
AT1G72416.1
Chaperone DnaJ-domain superfamily protein
Chr5_-_8856758 4.16 AT5G25440.1
AT5G25440.2
Protein kinase superfamily protein
Chr3_+_21836579 4.15 AT3G59080.2
Eukaryotic aspartyl protease family protein
Chr5_+_1608988 4.14 AT5G05440.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr3_-_6000447 4.12 AT3G17520.1
Late embryogenesis abundant protein (LEA) family protein
Chr3_+_21836406 4.11 AT3G59080.1
Eukaryotic aspartyl protease family protein
Chr2_+_11563933 4.10 AT2G27080.2
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_+_14912659 4.07 AT5G37540.1
Eukaryotic aspartyl protease family protein
Chr3_-_5254458 4.05 AT3G15530.2
AT3G15530.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_6869863 4.00 AT4G11290.1
Peroxidase superfamily protein
Chr5_-_3172701 3.98 AT5G10130.1
Pollen Ole e 1 allergen and extensin family protein
Chr4_+_13275200 3.96 AT4G26200.1
1-amino-cyclopropane-1-carboxylate synthase 7
Chr1_+_7911843 3.95 AT1G22410.1
Class-II DAHP synthetase family protein
Chr1_+_24354646 3.90 AT1G65490.2
AT1G65490.3
AT1G65490.1
transmembrane protein
Chr2_-_2362375 3.90 AT2G06050.1
oxophytodienoate-reductase 3
Chr2_-_16111911 3.86 AT2G38480.1
Uncharacterized protein family (UPF0497)
Chr1_+_19293478 3.79 AT1G51915.1
cryptdin protein-like protein
Chr5_+_4218786 3.78 AT5G13220.5
AT5G13220.1
AT5G13220.3
AT5G13220.2
AT5G13220.6
AT5G13220.7
AT5G13220.4
jasmonate-zim-domain protein 10
Chr5_+_15616770 3.78 AT5G39020.1
Malectin/receptor-like protein kinase family protein
Chr1_-_2152541 3.76 AT1G07000.1
exocyst subunit exo70 family protein B2
Chr1_-_8537780 3.75 AT1G24140.1
Matrixin family protein
Chr1_-_3392524 3.74 AT1G10340.2
AT1G10340.1
Ankyrin repeat family protein
Chr1_-_28581315 3.73 AT1G76160.1
SKU5 similar 5
Chr3_+_618398 3.71 AT3G02840.1
ARM repeat superfamily protein
Chr2_-_15013368 3.67 AT2G35710.2
Nucleotide-diphospho-sugar transferases superfamily protein
Chr4_-_12006209 3.66 AT4G22880.2
AT4G22880.1
AT4G22880.3
leucoanthocyanidin dioxygenase
Chr4_-_17711031 3.65 AT4G37700.1
hypothetical protein
Chr2_-_16497145 3.63 AT2G39518.1
Uncharacterized protein family (UPF0497)
Chr1_-_22595338 3.63 AT1G61260.1
cotton fiber (DUF761)
Chr2_-_1339468 3.52 AT2G04050.1
MATE efflux family protein
Chr5_-_25931384 3.51 AT5G64870.1
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr1_-_4970007 3.51 AT1G14520.2
myo-inositol oxygenase 1
Chr5_-_26519242 3.49 AT5G66400.2
Dehydrin family protein
Chr4_-_10391298 3.48 AT4G18970.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_18808243 3.47 AT3G50650.1
GRAS family transcription factor
Chr1_+_19935163 3.46 AT1G53430.2
Leucine-rich repeat transmembrane protein kinase
Chr5_+_25097944 3.45 AT5G62520.1
AT5G62520.2
similar to RCD one 5
Chr1_+_19934987 3.45 AT1G53430.1
Leucine-rich repeat transmembrane protein kinase
Chr4_-_10390991 3.45 AT4G18970.2
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_20718866 3.44 AT3G55840.1
Hs1pro-1 protein
Chr1_+_7238693 3.44 AT1G20823.1
RING/U-box superfamily protein
Chr3_+_23201032 3.41 AT3G62720.2
AT3G62720.1
xylosyltransferase 1
Chr3_+_19569256 3.40 AT3G52800.1
AT3G52800.2
A20/AN1-like zinc finger family protein
Chr4_+_10372658 3.38 AT4G18940.1
RNA ligase/cyclic nucleotide phosphodiesterase family protein
Chr1_+_618061 3.38 AT1G02810.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_3618058 3.27 AT2G08986.1
hypothetical protein
Chr5_-_26519447 3.27 AT5G66400.1
Dehydrin family protein
Chr3_+_22501544 3.26 AT3G60910.1
AT3G60910.2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_6299669 3.25 AT1G18300.1
nudix hydrolase homolog 4
Chr4_+_14368877 3.24 AT4G29140.1
MATE efflux family protein
Chr4_+_12291632 3.23 AT4G23550.1
WRKY family transcription factor
Chr1_+_5977323 3.22 AT1G17420.1
lipoxygenase 3
Chr4_-_12520898 3.22 AT4G24110.1
NADP-specific glutamate dehydrogenase
Chr1_+_7696427 3.21 AT1G21910.1
Integrase-type DNA-binding superfamily protein
Chr2_-_11800928 3.15 AT2G27660.1
Cysteine/Histidine-rich C1 domain family protein
Chr2_-_17992047 3.15 AT2G43290.1
Calcium-binding EF-hand family protein
Chr3_-_19442427 3.14 AT3G52450.1
plant U-box 22
Chr3_+_16271511 3.12 AT3G44720.1
arogenate dehydratase 4
Chr2_+_9737583 3.11 AT2G22860.1
phytosulfokine 2 precursor
Chr1_+_29178705 3.10 AT1G77640.1
Integrase-type DNA-binding superfamily protein
Chr2_-_13489679 3.07 AT2G31730.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_-_13456336 3.07 AT1G36060.1
Integrase-type DNA-binding superfamily protein
Chr1_+_6679281 3.05 AT1G19320.1
Pathogenesis-related thaumatin superfamily protein
Chr4_-_9663794 3.04 AT4G17230.2
AT4G17230.1
SCARECROW-like 13
Chr1_+_10897925 3.04 AT1G30720.1
FAD-binding Berberine family protein
Chr5_-_16974877 3.02 AT5G42440.1
Protein kinase superfamily protein
Chr5_+_24494291 3.02 AT5G60890.1
myb domain protein 34
Chr5_-_18579241 3.00 AT5G45800.2
AT5G45800.1
Leucine-rich repeat protein kinase family protein
Chr5_-_26088277 2.99 AT5G65280.1
GCR2-like 1
Chr3_-_3677279 2.99 AT3G11650.1
NDR1/HIN1-like 2
Chr4_-_14880331 2.97 AT4G30430.1
tetraspanin9
Chr2_+_11669629 2.96 AT2G27260.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_+_27127170 2.95 AT1G72100.1
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Chr5_-_2090430 2.94 AT5G06760.1
Late Embryogenesis Abundant 4-5
Chr2_-_7594195 2.94 AT2G17480.1
Seven transmembrane MLO family protein
Chr3_+_4371441 2.93 AT3G13432.1
transmembrane protein
Chr2_-_832619 2.92 AT2G02860.2
AT2G02860.1
sucrose transporter 2
Chr5_+_21138703 2.90 AT5G52050.1
MATE efflux family protein
Chr3_-_18469962 2.89 AT3G49790.1
Carbohydrate-binding protein
Chr5_+_20051829 2.86 AT5G49450.1
basic leucine-zipper 1
Chr2_-_13488691 2.86 AT2G31730.2
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_18559060 2.86 AT5G45750.1
RAB GTPase homolog A1C
Chr1_-_1437763 2.86 AT1G05020.1
ENTH/ANTH/VHS superfamily protein
Chr5_-_7496990 2.84 AT5G22570.1
WRKY DNA-binding protein 38
Chr1_-_24771393 2.84 AT1G66400.1
calmodulin like 23
Chr1_+_27058381 2.81 AT1G71890.1
Major facilitator superfamily protein
Chr3_+_19284339 2.80 AT3G51970.1
acyl-CoA sterol acyl transferase 1
Chr3_+_5121303 2.80 AT3G15210.1
ethylene responsive element binding factor 4
Chr5_-_7026533 2.80 AT5G20740.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_18634546 2.79 AT3G50260.1
cooperatively regulated by ethylene and jasmonate 1
Chr2_-_12188293 2.79 AT2G28500.1
LOB domain-containing protein 11
Chr3_+_634465 2.79 AT3G02880.1
Leucine-rich repeat protein kinase family protein
Chr4_-_14841067 2.77 AT4G30340.2
AT4G30340.1
diacylglycerol kinase 7
Chr4_+_14835792 2.76 AT4G30320.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr3_-_1261634 2.76 AT3G04640.2
AT3G04640.1
AT3G04640.3
glycine-rich protein
Chr2_-_15186852 2.75 AT2G36210.1
SAUR-like auxin-responsive protein family
Chr4_+_18478890 2.75 AT4G39830.3
AT4G39830.1
AT4G39830.2
AT4G39830.4
Cupredoxin superfamily protein
Chr4_+_8984787 2.75 AT4G15800.1
ralf-like 33
Chr2_-_13784471 2.75 AT2G32460.2
AT2G32460.1
myb domain protein 101
Chr1_-_19366924 2.75 AT1G52070.2
AT1G52070.1
Mannose-binding lectin superfamily protein
Chr1_-_8559066 2.75 AT1G24170.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr2_-_17268200 2.74 AT2G41420.1
proline-rich family protein
Chr1_-_6241510 2.73 AT1G18140.1
laccase 1
Chr1_-_30244949 2.73 AT1G80450.1
VQ motif-containing protein
Chr5_-_7026753 2.72 AT5G20740.2
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_-_20756690 2.71 AT3G55950.1
CRINKLY4 related 3
Chr4_+_15490740 2.69 AT4G32030.2
hypothetical protein
Chr2_-_17115047 2.69 AT2G41010.1
calmodulin (CAM)-binding protein of 25 kDa
Chr4_+_15490566 2.68 AT4G32030.1
hypothetical protein
Chr1_-_7040231 2.68 AT1G20330.1
sterol methyltransferase 2
Chr2_+_14216771 2.68 AT2G33570.1
glycosyltransferase family protein (DUF23)
Chr1_+_24359328 2.67 AT1G65510.2
AT1G65510.1
transmembrane protein
Chr5_-_8419076 2.67 AT5G24590.2
TCV-interacting protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G09410

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.5 10.6 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
3.1 15.4 GO:0019310 inositol catabolic process(GO:0019310)
1.9 7.5 GO:0035264 multicellular organism growth(GO:0035264)
1.8 1.8 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
1.7 5.2 GO:0010446 response to alkaline pH(GO:0010446)
1.5 6.0 GO:0010185 regulation of cellular defense response(GO:0010185)
1.2 11.8 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
1.2 5.8 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
1.1 5.6 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
1.0 8.0 GO:0009061 anaerobic respiration(GO:0009061)
1.0 5.8 GO:0046345 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.9 4.6 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.9 6.5 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.9 2.7 GO:0090058 metaxylem development(GO:0090058)
0.8 5.0 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.7 6.7 GO:0009799 specification of symmetry(GO:0009799)
0.7 2.2 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.7 2.2 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.7 2.6 GO:0048462 transmitting tissue development(GO:0010500) carpel formation(GO:0048462)
0.6 146.8 GO:0071456 cellular response to hypoxia(GO:0071456)
0.6 2.6 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.6 3.0 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.6 18.0 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.6 8.1 GO:0051865 protein autoubiquitination(GO:0051865)
0.5 1.6 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.5 4.3 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.5 1.6 GO:0034626 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.5 3.4 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.5 1.4 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.5 2.3 GO:1902065 response to L-glutamate(GO:1902065)
0.5 7.4 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.5 2.7 GO:1990019 protein storage vacuole organization(GO:1990019)
0.5 5.4 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.4 0.9 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.4 1.3 GO:0002215 defense response to nematode(GO:0002215)
0.4 2.2 GO:0071323 cellular response to chitin(GO:0071323)
0.4 5.7 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.4 3.8 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.4 1.3 GO:0009945 radial axis specification(GO:0009945)
0.4 2.1 GO:0046208 spermine catabolic process(GO:0046208)
0.4 0.8 GO:0048445 carpel morphogenesis(GO:0048445)
0.4 2.1 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.4 1.7 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.4 4.9 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.4 4.9 GO:0009554 megasporogenesis(GO:0009554)
0.4 1.2 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.4 5.7 GO:0046620 regulation of organ growth(GO:0046620)
0.4 1.2 GO:0045717 negative regulation of fatty acid biosynthetic process(GO:0045717) regulation of cell cycle arrest(GO:0071156) positive regulation of cell cycle arrest(GO:0071158)
0.4 6.3 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.4 3.8 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.4 15.4 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.4 6.5 GO:0015770 sucrose transport(GO:0015770)
0.4 4.0 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.4 2.5 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.3 2.8 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.3 1.4 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.3 2.7 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.3 3.9 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.3 1.3 GO:0045332 phospholipid translocation(GO:0045332)
0.3 0.9 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.3 4.6 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.3 0.9 GO:0010618 aerenchyma formation(GO:0010618)
0.3 0.8 GO:0046521 sphingoid catabolic process(GO:0046521)
0.3 12.4 GO:0045489 pectin biosynthetic process(GO:0045489)
0.3 5.1 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.3 1.3 GO:0010226 response to lithium ion(GO:0010226)
0.3 2.3 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.2 0.5 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.2 0.7 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.2 2.9 GO:0006094 gluconeogenesis(GO:0006094)
0.2 4.3 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.2 1.4 GO:0010601 positive regulation of auxin biosynthetic process(GO:0010601) positive regulation of hormone biosynthetic process(GO:0046886)
0.2 0.5 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.2 0.7 GO:0046506 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.2 1.1 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.2 1.6 GO:0009080 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) glutathione catabolic process(GO:0006751) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.2 1.5 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.2 1.7 GO:0006183 GTP biosynthetic process(GO:0006183)
0.2 3.0 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.2 1.1 GO:0090057 root radial pattern formation(GO:0090057)
0.2 2.8 GO:0043901 negative regulation of multi-organism process(GO:0043901)
0.2 1.1 GO:0050810 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.2 3.0 GO:0015976 carbon utilization(GO:0015976)
0.2 2.9 GO:0009901 anther dehiscence(GO:0009901)
0.2 23.3 GO:0010200 response to chitin(GO:0010200)
0.2 0.4 GO:1901070 guanosine-containing compound biosynthetic process(GO:1901070)
0.2 2.1 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.2 0.9 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.2 2.8 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.2 0.6 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 1.6 GO:0042659 regulation of cell fate specification(GO:0042659)
0.2 0.7 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.2 4.6 GO:0009959 negative gravitropism(GO:0009959)
0.2 1.2 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 7.1 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.2 0.5 GO:0010434 bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.2 0.7 GO:0071732 response to nitric oxide(GO:0071731) cellular response to nitric oxide(GO:0071732)
0.2 1.3 GO:0016233 telomere capping(GO:0016233)
0.2 3.8 GO:0009851 auxin biosynthetic process(GO:0009851)
0.2 1.6 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.2 0.5 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.2 0.8 GO:0030322 stabilization of membrane potential(GO:0030322)
0.2 1.9 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.2 0.5 GO:0072337 modified amino acid transport(GO:0072337)
0.2 1.7 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.2 1.5 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.1 0.9 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.1 3.5 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 1.0 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 11.9 GO:0010087 phloem or xylem histogenesis(GO:0010087)
0.1 1.3 GO:0010358 leaf shaping(GO:0010358)
0.1 1.8 GO:0010274 hydrotropism(GO:0010274)
0.1 0.5 GO:0070509 calcium ion import(GO:0070509)
0.1 1.2 GO:0010363 regulation of plant-type hypersensitive response(GO:0010363)
0.1 0.7 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.1 1.0 GO:0008535 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 0.8 GO:1900034 regulation of cellular response to heat(GO:1900034)
0.1 1.1 GO:0015691 cadmium ion transport(GO:0015691)
0.1 0.6 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.1 3.2 GO:0010193 response to ozone(GO:0010193)
0.1 0.8 GO:0071588 chloroplast-nucleus signaling pathway(GO:0010019) hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.3 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 0.4 GO:0040031 snRNA modification(GO:0040031)
0.1 0.4 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
0.1 2.1 GO:0009682 induced systemic resistance(GO:0009682)
0.1 1.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.9 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 2.6 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.1 0.7 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.1 1.8 GO:0010215 cellulose microfibril organization(GO:0010215)
0.1 4.0 GO:0055088 lipid homeostasis(GO:0055088)
0.1 0.7 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 7.7 GO:0009739 response to gibberellin(GO:0009739)
0.1 0.6 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 1.1 GO:0046688 response to copper ion(GO:0046688)
0.1 0.8 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.1 2.2 GO:0043449 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.1 1.9 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.1 2.8 GO:0002239 response to oomycetes(GO:0002239)
0.1 2.7 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 1.3 GO:1901072 aminoglycan metabolic process(GO:0006022) aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 1.2 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 1.4 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.1 0.7 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.1 0.7 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.1 1.9 GO:0045010 positive regulation of actin filament polymerization(GO:0030838) actin nucleation(GO:0045010)
0.1 3.8 GO:0009631 cold acclimation(GO:0009631)
0.1 0.3 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.1 1.5 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.1 0.7 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.3 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 1.2 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.1 1.3 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 0.3 GO:0046683 response to purine-containing compound(GO:0014074) response to organophosphorus(GO:0046683)
0.1 0.4 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.1 4.2 GO:0019722 calcium-mediated signaling(GO:0019722)
0.1 0.2 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.1 0.3 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 0.2 GO:0010047 fruit dehiscence(GO:0010047)
0.1 1.8 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.1 2.1 GO:0071804 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.1 3.4 GO:0008283 cell proliferation(GO:0008283)
0.1 0.2 GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process(GO:0080088)
0.1 5.8 GO:0009751 response to salicylic acid(GO:0009751)
0.1 0.5 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 1.3 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.6 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 6.2 GO:0043413 protein glycosylation(GO:0006486) glycoprotein biosynthetic process(GO:0009101) macromolecule glycosylation(GO:0043413)
0.1 1.6 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 1.1 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.1 GO:0098534 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.0 0.7 GO:0008361 regulation of cell size(GO:0008361)
0.0 0.5 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.4 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 4.0 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.8 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.5 GO:0051177 meiotic sister chromatid segregation(GO:0045144) meiotic sister chromatid cohesion(GO:0051177)
0.0 0.6 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 1.9 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 1.1 GO:0009625 response to insect(GO:0009625)
0.0 0.2 GO:0019419 sulfate reduction(GO:0019419)
0.0 0.8 GO:0006378 mRNA polyadenylation(GO:0006378)
0.0 0.5 GO:1902074 response to salt(GO:1902074)
0.0 0.6 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.8 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.9 GO:0042330 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.3 GO:0030026 cellular manganese ion homeostasis(GO:0030026)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 2.0 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 4.2 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 0.2 GO:0070370 cellular heat acclimation(GO:0070370)
0.0 0.5 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.3 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of protein serine/threonine kinase activity(GO:0071901) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 0.1 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 1.3 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 1.1 GO:0009853 photorespiration(GO:0009853)
0.0 1.5 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 1.5 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.3 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.5 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.0 0.2 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
0.0 2.2 GO:0042546 cell wall biogenesis(GO:0042546)
0.0 0.1 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.6 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 1.1 GO:0019757 S-glycoside metabolic process(GO:0016143) glycosinolate metabolic process(GO:0019757) glucosinolate metabolic process(GO:0019760)
0.0 1.4 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.8 GO:0016125 sterol metabolic process(GO:0016125)
0.0 0.7 GO:0010162 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.0 0.4 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.6 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.3 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.9 GO:0043484 regulation of RNA splicing(GO:0043484)
0.0 0.9 GO:0006869 lipid transport(GO:0006869)
0.0 0.4 GO:0007267 cell-cell signaling(GO:0007267)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
2.0 6.1 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.4 1.8 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.3 3.1 GO:0030139 endocytic vesicle(GO:0030139)
0.3 1.5 GO:0005960 glycine cleavage complex(GO:0005960)
0.3 6.1 GO:0031012 extracellular matrix(GO:0031012)
0.2 1.7 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.2 2.8 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.2 7.8 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.2 61.3 GO:0031225 anchored component of membrane(GO:0031225)
0.2 0.6 GO:0035371 microtubule plus-end(GO:0035371)
0.2 2.4 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.2 0.8 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.2 35.7 GO:0009505 plant-type cell wall(GO:0009505)
0.2 2.5 GO:0005801 cis-Golgi network(GO:0005801)
0.2 8.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.2 2.2 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.1 1.2 GO:0070531 BRCA1-A complex(GO:0070531)
0.1 9.9 GO:0010287 plastoglobule(GO:0010287)
0.1 0.7 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.1 0.4 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 5.6 GO:0090406 pollen tube(GO:0090406)
0.1 1.9 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.1 0.2 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 4.8 GO:0010008 endosome membrane(GO:0010008)
0.1 3.6 GO:0031201 SNARE complex(GO:0031201)
0.1 4.2 GO:0019898 extrinsic component of membrane(GO:0019898)
0.1 0.4 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 0.6 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.2 GO:0031211 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.1 0.3 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.5 GO:0098576 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.1 GO:0005813 centrosome(GO:0005813) centriole(GO:0005814)
0.0 3.9 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 15.1 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.3 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 108.3 GO:0005576 extracellular region(GO:0005576)
0.0 4.4 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.7 GO:0031965 nuclear membrane(GO:0031965)
0.0 1.1 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.6 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 2.3 GO:0005874 microtubule(GO:0005874)
0.0 0.1 GO:0000839 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.0 0.3 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.9 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 0.4 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 4.3 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.6 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.8 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
3.5 10.6 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
3.1 15.4 GO:0050113 inositol oxygenase activity(GO:0050113)
1.7 8.3 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
1.5 6.0 GO:0046423 allene-oxide cyclase activity(GO:0046423)
1.3 4.0 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
1.2 5.8 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
1.1 8.0 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
1.1 3.4 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
1.1 5.3 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.9 1.9 GO:0052736 beta-glucanase activity(GO:0052736)
0.9 4.4 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.9 2.6 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.9 2.6 GO:0035671 enone reductase activity(GO:0035671)
0.8 3.4 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.8 5.0 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.7 2.1 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.6 3.9 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.6 1.9 GO:0047912 galacturonokinase activity(GO:0047912)
0.6 4.5 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.6 1.9 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.6 2.2 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.5 4.9 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.5 1.6 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.5 5.8 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.5 5.3 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.5 1.5 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.5 1.5 GO:0010331 gibberellin binding(GO:0010331)
0.4 6.3 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.4 15.2 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.4 1.2 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.4 11.2 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.4 2.3 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.4 3.4 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.3 1.4 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.3 2.8 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.3 1.4 GO:0015245 fatty acid transporter activity(GO:0015245)
0.3 1.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.3 3.8 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.3 1.6 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.3 1.5 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.3 6.7 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.3 0.9 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.3 1.1 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.3 3.9 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.3 3.3 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.3 3.3 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.3 3.2 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.2 1.7 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.2 0.9 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.2 0.9 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.2 4.6 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.2 5.0 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.2 2.7 GO:0008061 chitin binding(GO:0008061)
0.2 2.7 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.2 5.0 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.2 0.6 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.2 0.7 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.2 1.1 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.2 10.3 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.2 1.2 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 0.7 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.2 1.6 GO:0009922 fatty acid elongase activity(GO:0009922)
0.2 1.4 GO:0001653 peptide receptor activity(GO:0001653) guanylate cyclase activity(GO:0004383)
0.2 0.7 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.2 1.0 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.2 1.3 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.2 0.8 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 0.7 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.1 2.2 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 1.8 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 1.0 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.7 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.1 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.1 8.8 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.1 1.2 GO:0048038 quinone binding(GO:0048038)
0.1 0.7 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 1.2 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 2.7 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.1 0.5 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 3.6 GO:0008810 cellulase activity(GO:0008810)
0.1 4.0 GO:0005179 hormone activity(GO:0005179)
0.1 1.2 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 3.0 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 1.9 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.1 2.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 1.9 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 1.1 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.1 0.7 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.5 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.1 0.4 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 19.0 GO:0005507 copper ion binding(GO:0005507)
0.1 0.9 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 1.6 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.1 0.4 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 2.3 GO:0031386 protein tag(GO:0031386)
0.1 6.5 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 0.9 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.1 0.8 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 1.3 GO:0070628 proteasome binding(GO:0070628)
0.1 0.5 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 0.3 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.1 3.2 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 0.6 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.1 1.0 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.1 3.7 GO:0005484 SNAP receptor activity(GO:0005484)
0.1 1.0 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.1 3.4 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.1 8.1 GO:0009055 electron carrier activity(GO:0009055)
0.1 1.1 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 7.1 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 4.7 GO:0019901 protein kinase binding(GO:0019901)
0.1 1.4 GO:0008066 glutamate receptor activity(GO:0008066)
0.1 0.5 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 13.4 GO:0005509 calcium ion binding(GO:0005509)
0.1 0.2 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.1 0.8 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 0.5 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.5 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 10.3 GO:0043531 ADP binding(GO:0043531)
0.1 1.3 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.3 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.8 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 4.1 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.6 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.6 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.1 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.5 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 8.0 GO:0003924 GTPase activity(GO:0003924)
0.0 0.4 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.6 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.3 GO:0030332 cyclin binding(GO:0030332)
0.0 1.6 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 5.5 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.0 0.7 GO:0005548 phospholipid transporter activity(GO:0005548)
0.0 0.2 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.0 0.2 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.5 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.4 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 1.4 GO:0008483 transaminase activity(GO:0008483) transferase activity, transferring nitrogenous groups(GO:0016769)
0.0 0.4 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.0 0.4 GO:0016832 aldehyde-lyase activity(GO:0016832)
0.0 1.3 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.1 GO:0000150 recombinase activity(GO:0000150)
0.0 0.2 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.6 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.0 0.7 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.4 GO:0017069 snRNA binding(GO:0017069)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 1.0 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 1.0 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.1 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.1 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.0 1.4 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.7 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381) manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.3 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.4 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 6.9 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 1.3 GO:0051020 GTPase binding(GO:0051020)
0.0 0.2 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.4 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 1.0 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.1 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.5 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.4 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.9 GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors(GO:0016627)
0.0 0.1 GO:0008157 protein phosphatase 1 binding(GO:0008157)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 4.5 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.9 5.7 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.4 1.2 PID AURORA A PATHWAY Aurora A signaling
0.1 0.7 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.1 0.2 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.1 1.0 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 0.4 PID CMYB PATHWAY C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 4.5 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.5 1.6 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.5 4.8 REACTOME TRANSCRIPTION Genes involved in Transcription
0.5 4.1 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.3 1.2 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.2 2.2 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.3 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis