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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G02840

Z-value: 0.08

Transcription factors associated with AT5G02840

Gene Symbol Gene ID Gene Info
AT5G02840
AT5G02840 LHY/CCA1-like 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LCL1arTal_v1_Chr5_+_648648_648706-0.048.9e-01Click!

Activity profile of AT5G02840 motif

Sorted Z-values of AT5G02840 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_3203988 0.10 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
Chr4_+_14034536 0.03 AT4G28370.3
AT4G28370.2
AT4G28370.1
AT4G28370.4
AT4G28370
RING/U-box superfamily protein
Chr5_+_17714390 0.03 AT5G44030.2
AT5G44030.1
CESA4
cellulose synthase A4
Chr5_+_17715687 0.01 AT5G44030.3
CESA4
cellulose synthase A4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G02840

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)