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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G36780

Z-value: 1.20

Transcription factors associated with AT4G36780

Gene Symbol Gene ID Gene Info
AT4G36780
AT4G36780 BES1/BZR1 homolog 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
BEH2arTal_v1_Chr4_-_17334355_173343550.362.0e-01Click!

Activity profile of AT4G36780 motif

Sorted Z-values of AT4G36780 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_17712290 3.43 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
Chr2_-_17710433 2.87 AT2G42530.1
COR15B
cold regulated 15b
Chr2_+_538250 2.35 AT2G02120.1
PDF2.1
Scorpion toxin-like knottin superfamily protein
Chr2_-_6493512 2.08 AT2G15020.1
AT2G15020
hypothetical protein
Chr5_-_17199793 1.66 AT5G42900.1
AT5G42900.3
AT5G42900.2
COR27
cold regulated protein 27
Chr5_+_17987591 1.61 AT5G44590.2
AT5G44590.1
AT5G44590
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_19245591 1.59 AT2G46830.1
AT2G46830.2
CCA1
circadian clock associated 1
Chr2_-_16603059 1.56 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr2_-_19370478 1.52 AT2G47180.1
GolS1
galactinol synthase 1
Chr2_+_19246681 1.51 AT2G46830.3
CCA1
circadian clock associated 1
Chr3_-_23334034 1.48 AT3G63160.1
OEP6
outer envelope membrane protein
Chr2_+_7845923 1.39 AT2G18050.2
AT2G18050.1
HIS1-3
histone H1-3
Chr2_-_16603319 1.36 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr5_-_5177897 1.33 AT5G15850.1
COL1
CONSTANS-like 1
Chr5_+_5206156 1.27 AT5G15950.2
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr3_-_17306633 1.26 AT3G46970.1
PHS2
alpha-glucan phosphorylase 2
Chr5_+_5205869 1.23 AT5G15950.1
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr5_+_5211719 1.22 AT5G15970.1
KIN2
stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
Chr1_-_29716255 1.18 AT1G78995.1
AT1G78995
hypothetical protein
Chr1_-_21235292 1.14 AT1G56650.1
PAP1
production of anthocyanin pigment 1
Chr5_-_22712441 1.14 AT5G56080.1
NAS2
nicotianamine synthase 2
Chr2_+_16079679 1.12 AT2G38390.1
AT2G38390
Peroxidase superfamily protein
Chr3_-_18373147 1.12 AT3G49570.1
LSU3
response to low sulfur 3
Chr1_-_22317070 1.11 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr3_-_22915393 1.09 AT3G61890.1
HB-12
homeobox 12
Chr5_-_6850237 1.08 AT5G20280.1
SPS1F
sucrose phosphate synthase 1F
Chr5_+_17526660 1.07 AT5G43630.2
AT5G43630.1
AT5G43630.3
AT5G43630.4
TZP
zinc knuckle (CCHC-type) family protein
Chr1_+_6763765 1.07 AT1G19530.1
AT1G19530.2
AT1G19530
DNA polymerase epsilon catalytic subunit A
Chr1_+_20617313 1.06 AT1G55265.1
AT1G55265
DUF538 family protein, putative (Protein of unknown function, DUF538)
Chr3_-_8085669 1.04 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
Chr2_-_9056481 1.03 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr2_-_19166949 1.03 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
Chr5_+_8541713 0.99 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
Chr1_-_2165261 0.99 AT1G07050.2
AT1G07050.1
AT1G07050
CCT motif family protein
Chr1_+_18546086 0.98 AT1G50050.2
AT1G50050.1
AT1G50050
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr1_-_25238036 0.98 AT1G67360.1
AT1G67360
Rubber elongation factor protein (REF)
Chr1_-_25238216 0.98 AT1G67360.2
AT1G67360
Rubber elongation factor protein (REF)
Chr2_-_15092353 0.97 AT2G35940.3
AT2G35940.1
BLH1
BEL1-like homeodomain 1
Chr2_+_15528877 0.96 AT2G36970.1
AT2G36970
UDP-Glycosyltransferase superfamily protein
Chr4_-_18472048 0.95 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr5_+_15878698 0.95 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr3_-_2890520 0.95 AT3G09390.2
AT3G09390.1
MT2A
metallothionein 2A
Chr4_-_12345652 0.95 AT4G23700.2
CHX17
cation/H+ exchanger 17
Chr1_-_3590928 0.94 AT1G10760.1
AT1G10760.3
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr4_+_9171280 0.94 AT4G16190.1
AT4G16190
Papain family cysteine protease
Chr1_+_22198266 0.93 AT1G60190.1
PUB19
ARM repeat superfamily protein
Chr4_-_12346051 0.93 AT4G23700.1
CHX17
cation/H+ exchanger 17
Chr2_+_15053483 0.93 AT2G35840.4
AT2G35840.2
AT2G35840.1
AT2G35840
Sucrose-6F-phosphate phosphohydrolase family protein
Chr5_-_6725966 0.93 AT5G19890.1
AT5G19890
Peroxidase superfamily protein
Chr5_-_23501416 0.92 AT5G58070.1
TIL
temperature-induced lipocalin
Chr4_+_7887440 0.91 AT4G13572.1
AT4G13572
hypothetical protein
Chr5_+_4776733 0.91 AT5G14780.1
AT5G14780.3
AT5G14780.2
FDH
formate dehydrogenase
Chr4_-_10325816 0.91 AT4G18810.2
AT4G18810.1
AT4G18810
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_17202848 0.90 AT2G41250.1
AT2G41250
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_+_8708841 0.90 AT4G15248.1
BBX30
B-box type zinc finger family protein
Chr3_+_3923969 0.90 AT3G12320.3
AT3G12320
hypothetical protein
Chr2_+_11135624 0.90 AT2G26150.2
AT2G26150.1
AT2G26150.4
AT2G26150.3
HSFA2
heat shock transcription factor A2
Chr5_-_4430901 0.90 AT5G13730.1
SIG4
sigma factor 4
Chr1_-_4855287 0.89 AT1G14200.1
AT1G14200
RING/U-box superfamily protein
Chr4_+_8839256 0.89 AT4G15450.1
AT4G15450.2
AT4G15450
Senescence/dehydration-associated protein-like protein
Chr2_+_17057388 0.88 AT2G40880.1
CYSA
cystatin A
Chr2_-_15092178 0.88 AT2G35940.2
BLH1
BEL1-like homeodomain 1
Chr5_+_17171807 0.88 AT5G42825.1
AT5G42825
hypothetical protein
Chr3_-_22907958 0.87 AT3G61880.1
AT3G61880.2
CYP78A9
cytochrome p450 78a9
Chr1_-_3590701 0.87 AT1G10760.2
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr4_+_12456342 0.86 AT4G23990.1
CSLG3
cellulose synthase like G3
Chr1_+_17766738 0.86 AT1G48100.1
AT1G48100
Pectin lyase-like superfamily protein
Chr3_+_3923515 0.86 AT3G12320.1
AT3G12320
hypothetical protein
Chr1_+_21146236 0.86 AT1G56460.3
AT1G56460.2
AT1G56460.1
AT1G56460
HIT zinc finger and PAPA-1-like domain-containing protein
Chr1_-_30142697 0.85 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_17065813 0.85 AT2G40900.1
UMAMIT11
nodulin MtN21 /EamA-like transporter family protein
Chr3_-_23195917 0.84 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
Chr4_+_12457466 0.84 AT4G23990.2
CSLG3
cellulose synthase like G3
Chr5_-_20720681 0.84 AT5G50920.1
CLPC1
CLPC homologue 1
Chr3_+_16818347 0.84 AT3G45780.2
PHOT1
phototropin 1
Chr2_+_10379948 0.83 AT2G24420.1
AT2G24420.2
AT2G24420
DNA repair ATPase-like protein
Chr3_+_16816721 0.82 AT3G45780.1
PHOT1
phototropin 1
Chr3_+_3923735 0.82 AT3G12320.2
AT3G12320
hypothetical protein
Chr1_+_23953099 0.81 AT1G64500.1
AT1G64500
Glutaredoxin family protein
Chr3_+_5243432 0.80 AT3G15510.1
NAC2
NAC domain containing protein 2
Chr3_-_3238267 0.80 AT3G10410.1
SCPL49
SERINE CARBOXYPEPTIDASE-LIKE 49
Chr3_-_19547171 0.80 AT3G52740.1
AT3G52740
hypothetical protein
Chr5_+_26688943 0.80 AT5G66820.1
AT5G66820
transmembrane protein
Chr3_-_9580086 0.78 AT3G26180.2
AT3G26180.1
CYP71B20
cytochrome P450, family 71, subfamily B, polypeptide 20
Chr4_+_9865103 0.78 AT4G17730.2
AT4G17730.1
SYP23
syntaxin of plants 23
Chr2_+_17507343 0.78 AT2G41940.1
ZFP8
zinc finger protein 8
Chr3_-_17506124 0.78 AT3G47500.1
CDF3
cycling DOF factor 3
Chr1_-_26800483 0.78 AT1G71040.1
LPR2
Cupredoxin superfamily protein
Chr3_-_17658353 0.77 AT3G47860.1
CHL
chloroplastic lipocalin
Chr2_-_2081858 0.77 AT2G05620.1
AT2G05620.2
PGR5
proton gradient regulation 5
Chr1_-_20563269 0.77 AT1G55110.2
AT1G55110.1
AT1G55110.3
IDD7
indeterminate(ID)-domain 7
Chr1_+_29759030 0.76 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
Chr3_-_5845220 0.76 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_25176230 0.76 AT1G67265.1
RTFL21
ROTUNDIFOLIA like 21
Chr1_+_2274926 0.75 AT1G07400.1
AT1G07400
HSP20-like chaperones superfamily protein
Chr3_-_10790553 0.75 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
Chr1_-_149806 0.75 AT1G01390.1
AT1G01390.2
AT1G01390
UDP-Glycosyltransferase superfamily protein
Chr5_-_5018347 0.74 AT5G15450.1
CLPB3
casein lytic proteinase B3
Chr4_-_11636720 0.74 AT4G21920.1
AT4G21920
hypothetical protein
Chr3_+_3239180 0.74 AT3G10420.1
SPD1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_7883926 0.73 AT4G13560.2
AT4G13560.1
UNE15
Late embryogenesis abundant protein (LEA) family protein
Chr1_+_5946448 0.73 AT1G17360.1
AT1G17360
LOW protein: protein phosphatase 1 regulatory subunit-like protein
Chr1_-_9251659 0.73 AT1G26761.1
AT1G26761
Arabinanase/levansucrase/invertase
Chr3_-_7993588 0.73 AT3G22550.1
AT3G22550
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581)
Chr1_+_24901882 0.73 AT1G66760.2
AT1G66760.1
AT1G66760.4
AT1G66760.3
AT1G66760
MATE efflux family protein
Chr3_+_3238996 0.73 AT3G10420.2
SPD1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_3157694 0.72 AT5G10100.1
AT5G10100.3
AT5G10100.4
TPPI
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_+_29815470 0.72 AT1G79270.1
AT1G79270.3
AT1G79270.2
AT1G79270.4
ECT8
evolutionarily conserved C-terminal region 8
Chr1_-_10548140 0.72 AT1G30070.2
AT1G30070.1
AT1G30070
SGS domain-containing protein
Chr3_+_4544364 0.72 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
Chr1_-_29715017 0.72 AT1G78990.1
AT1G78990
HXXXD-type acyl-transferase family protein
Chr5_-_4933620 0.72 AT5G15190.2
AT5G15190.1
AT5G15190
hypothetical protein
Chr5_-_24836933 0.71 AT5G61820.1
AT5G61820.2
AT5G61820
stress up-regulated Nod 19 protein
Chr1_-_3396953 0.71 AT1G10360.1
GSTU18
glutathione S-transferase TAU 18
Chr3_+_3776177 0.71 AT3G11930.2
AT3G11930.3
AT3G11930.1
AT3G11930.4
AT3G11930
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr2_-_6175064 0.71 AT2G14510.1
AT2G14510.2
AT2G14510
Leucine-rich repeat protein kinase family protein
Chr1_-_507268 0.71 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
Chr4_+_7304323 0.71 AT4G12290.2
AT4G12290
Copper amine oxidase family protein
Chr1_-_20731289 0.70 AT1G55530.3
AT1G55530.2
AT1G55530.1
AT1G55530
RING/U-box superfamily protein
Chr1_+_6450585 0.70 AT1G18710.1
MYB47
myb domain protein 47
Chr1_+_26931852 0.70 AT1G71480.2
AT1G71480.1
AT1G71480.3
AT1G71480
Nuclear transport factor 2 (NTF2) family protein
Chr5_+_4445423 0.70 AT5G13770.1
AT5G13770
Pentatricopeptide repeat (PPR-like) superfamily protein
Chr4_-_843531 0.70 AT4G01940.1
NFU1
NFU domain protein 1
Chr3_+_7667027 0.70 AT3G21760.1
HYR1
UDP-Glycosyltransferase superfamily protein
Chr1_-_26723978 0.69 AT1G70880.1
AT1G70880
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_-_26811848 0.69 AT1G71080.1
AT1G71080
RNA polymerase II transcription elongation factor
Chr1_+_26452847 0.69 AT1G70250.1
AT1G70250
receptor serine/threonine kinase
Chr1_-_26163715 0.69 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr4_+_7303985 0.69 AT4G12290.1
AT4G12290
Copper amine oxidase family protein
Chr1_+_22737475 0.69 AT1G61620.1
AT1G61620
phosphoinositide binding protein
Chr4_-_8095749 0.69 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
Chr3_+_17480521 0.68 AT3G47430.1
PEX11B
peroxin 11B
Chr4_-_7026224 0.68 AT4G11650.1
OSM34
osmotin 34
Chr5_+_9157142 0.68 AT5G26200.1
AT5G26200
Mitochondrial substrate carrier family protein
Chr1_-_7089606 0.68 AT1G20450.1
AT1G20450.2
ERD10
Dehydrin family protein
Chr5_-_10348234 0.68 AT5G28400.1
AT5G28400
embryo defective protein
Chr5_+_22085998 0.68 AT5G54390.1
HL
HAL2-like protein
Chr5_+_105268 0.67 AT5G01260.3
AT5G01260.2
AT5G01260.1
AT5G01260
Carbohydrate-binding-like fold
Chr5_-_9011618 0.67 AT5G25840.1
AT5G25840
DUF1677 family protein (DUF1677)
Chr1_-_23745385 0.67 AT1G63990.1
AT1G63990.2
SPO11-2
sporulation 11-2
Chr5_-_19302117 0.67 AT5G47610.1
AT5G47610
RING/U-box superfamily protein
Chr4_+_8360996 0.67 AT4G14560.1
IAA1
indole-3-acetic acid inducible
Chr5_+_20371798 0.67 AT5G50100.1
AT5G50100
Putative thiol-disulfide oxidoreductase DCC
Chr1_-_16851224 0.67 AT1G44446.3
AT1G44446.2
AT1G44446.1
CH1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr1_-_16851010 0.67 AT1G44446.4
CH1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr3_-_20178982 0.66 AT3G54500.1
AT3G54500.4
AT3G54500.3
AT3G54500.8
AT3G54500.2
AT3G54500.5
AT3G54500.7
AT3G54500.6
AT3G54500
agglutinin-like protein
Chr4_-_17559104 0.65 AT4G37310.1
CYP81H1
cytochrome P450, family 81, subfamily H, polypeptide 1
Chr4_+_886580 0.65 AT4G02020.1
AT4G02020.2
AT4G02020.4
AT4G02020.3
SWN
SET domain-containing protein
Chr5_-_10295283 0.65 AT5G28300.1
AT5G28300
Duplicated homeodomain-like superfamily protein
Chr3_+_10524181 0.65 AT3G28220.1
AT3G28220
TRAF-like family protein
Chr1_+_190408 0.65 AT1G01520.4
AT1G01520.2
AT1G01520.3
AT1G01520.1
AT1G01520.5
ASG4
Homeodomain-like superfamily protein
Chr2_-_15421866 0.65 AT2G36790.1
UGT73C6
UDP-glucosyl transferase 73C6
Chr1_-_9451768 0.65 AT1G27200.1
AT1G27200
glycosyltransferase family protein (DUF23)
Chr2_-_10113005 0.64 AT2G23760.3
AT2G23760.4
AT2G23760.1
BLH4
BEL1-like homeodomain 4
Chr3_-_4657723 0.64 AT3G14060.1
AT3G14060
hypothetical protein
Chr1_+_20447157 0.64 AT1G54820.1
AT1G54820.2
AT1G54820.3
AT1G54820.4
AT1G54820
Protein kinase superfamily protein
Chr4_-_2118617 0.64 AT4G04330.1
RbcX1
Chaperonin-like RbcX protein
Chr3_+_1035238 0.64 AT3G04000.1
AT3G04000
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_15053634 0.63 AT2G35840.3
AT2G35840
Sucrose-6F-phosphate phosphohydrolase family protein
Chr5_-_1409893 0.63 AT5G04850.2
AT5G04850.1
VPS60.2
SNF7 family protein
Chr4_-_7992429 0.63 AT4G13770.1
CYP83A1
cytochrome P450, family 83, subfamily A, polypeptide 1
Chr3_-_19249095 0.63 AT3G51880.2
AT3G51880.4
AT3G51880.1
AT3G51880.5
AT3G51880.3
HMGB1
high mobility group B1
Chr5_+_8541558 0.63 AT5G24860.2
FPF1
flowering promoting factor 1
Chr2_+_10244745 0.63 AT2G24100.1
ASG1
ATP-dependent DNA helicase
Chr1_+_27786864 0.62 AT1G73885.1
AT1G73885
AT-rich interactive domain protein
Chr1_-_30260732 0.62 AT1G80480.1
PTAC17
plastid transcriptionally active 17
Chr2_-_10831655 0.62 AT2G25450.1
AT2G25450
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_+_17554493 0.62 AT4G37300.1
MEE59
maternal effect embryo arrest 59
Chr3_-_5153642 0.62 AT3G15310.1
AT3G15310

Chr4_-_12068538 0.62 AT4G23020.2
AT4G23020.1
TRM11
hypothetical protein
Chr4_-_18190556 0.62 AT4G39040.2
AT4G39040.1
AT4G39040
RNA-binding CRS1 / YhbY (CRM) domain protein
Chr1_-_17706460 0.62 AT1G48000.1
MYB112
myb domain protein 112
Chr4_+_17055226 0.62 AT4G36060.1
AT4G36060.3
AT4G36060.2
AT4G36060.4
bHLH11
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_15130075 0.62 AT4G31115.1
AT4G31115.2
AT4G31115
DUF1997 family protein, putative (DUF1997)
Chr5_-_20667312 0.62 AT5G50800.1
SWEET13
Nodulin MtN3 family protein
Chr5_-_6428454 0.61 AT5G19150.2
AT5G19150.1
AT5G19150
pfkB-like carbohydrate kinase family protein
Chr1_-_25190694 0.61 AT1G67280.1
AT1G67280.2
AT1G67280
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
Chr1_+_12026936 0.61 AT1G33170.1
AT1G33170
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_480650 0.61 AT1G02390.1
GPAT2
glycerol-3-phosphate acyltransferase 2
Chr2_+_19000180 0.61 AT2G46270.2
AT2G46270.1
AT2G46270.4
AT2G46270.3
GBF3
G-box binding factor 3
Chr1_-_8935544 0.60 AT1G25440.1
BBX15
B-box type zinc finger protein with CCT domain-containing protein
Chr5_-_6993948 0.60 AT5G20670.1
AT5G20670
DUF1677 family protein (DUF1677)
Chr3_-_7704958 0.60 AT3G21870.1
CYCP2%3B1
cyclin p2;1
Chr4_+_16130593 0.60 AT4G33540.1
AT4G33540.2
AT4G33540
metallo-beta-lactamase family protein
Chr4_+_2554997 0.60 AT4G04990.1
AT4G04990
serine/arginine repetitive matrix-like protein (DUF761)
Chr4_-_11648644 0.60 AT4G21960.1
PRXR1
Peroxidase superfamily protein
Chr3_+_17549111 0.60 AT3G47610.1
AT3G47610
transcription regulator/ zinc ion binding protein
Chr1_+_26687202 0.60 AT1G70760.1
NdhL
inorganic carbon transport protein-like protein
Chr5_+_579744 0.60 AT5G02580.1
AT5G02580.3
AT5G02580.2
AT5G02580
argininosuccinate lyase
Chr4_+_5500313 0.60 AT4G08620.1
SULTR1%3B1
sulfate transporter 1;1
Chr2_+_17165191 0.59 AT2G41180.1
SIB2
VQ motif-containing protein
Chr2_+_15669131 0.59 AT2G37330.1
ALS3
aluminum sensitive 3
Chr5_+_25948954 0.59 AT5G64940.1
AT5G64940.2
ATH13
ABC2 homolog 13
Chr2_+_11299169 0.59 AT2G26570.2
WEB1
WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827)
Chr1_-_22221433 0.59 AT1G60260.1
BGLU5
beta glucosidase 5
Chr2_+_19104632 0.59 AT2G46530.1
AT2G46530.2
ARF11
auxin response factor 11
Chr1_-_1647147 0.59 AT1G05560.1
UGT75B1
UDP-glucosyltransferase 75B1
Chr3_+_11810726 0.59 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
Chr2_-_15725022 0.59 AT2G37450.2
AT2G37450.3
AT2G37450.1
UMAMIT13
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_2238017 0.59 AT1G07280.1
AT1G07280.2
AT1G07280.4
AT1G07280.3
AT1G07280
Tetratricopeptide repeat (TPR)-like superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G36780

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.6 GO:1901562 response to paraquat(GO:1901562)
0.5 4.5 GO:0009819 drought recovery(GO:0009819)
0.5 2.9 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.5 2.7 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.4 4.6 GO:0009610 response to symbiotic fungus(GO:0009610)
0.4 1.4 GO:0072351 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.3 1.4 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.3 1.7 GO:0010360 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.3 1.0 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 1.5 GO:0005980 glycogen catabolic process(GO:0005980)
0.3 0.9 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.3 1.9 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.3 1.1 GO:0071836 nectar secretion(GO:0071836)
0.2 0.5 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.7 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 1.6 GO:0009745 sucrose mediated signaling(GO:0009745)
0.2 0.6 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.2 2.1 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.2 0.8 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 2.7 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.2 0.6 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.2 1.0 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.2 0.6 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.2 1.0 GO:0000706 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.2 0.9 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.2 1.1 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.2 1.5 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.2 0.2 GO:0043605 cellular amide catabolic process(GO:0043605)
0.2 0.7 GO:0048480 stigma development(GO:0048480)
0.2 0.6 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.2 0.4 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.2 0.7 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.2 0.5 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.2 1.0 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.2 1.5 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.2 1.1 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.2 0.5 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.2 3.0 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 1.5 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 1.5 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 0.4 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424)
0.1 0.4 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.6 GO:0035865 cellular response to potassium ion(GO:0035865)
0.1 0.8 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.3 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.4 GO:0051639 actin filament network formation(GO:0051639)
0.1 0.4 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.1 0.5 GO:0000023 maltose metabolic process(GO:0000023)
0.1 1.8 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.1 0.5 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.1 0.9 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 0.4 GO:0080058 protein deglutathionylation(GO:0080058)
0.1 1.0 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.5 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.4 GO:0080153 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.1 0.5 GO:0033306 phytol metabolic process(GO:0033306)
0.1 0.4 GO:1990532 stress response to nickel ion(GO:1990532)
0.1 0.4 GO:0010617 circadian regulation of calcium ion oscillation(GO:0010617)
0.1 1.7 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.5 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.1 1.0 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.1 0.3 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.3 GO:0090547 guard cell fate commitment(GO:0010377) response to low humidity(GO:0090547)
0.1 0.7 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.1 0.3 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 0.6 GO:0051289 protein homotetramerization(GO:0051289)
0.1 0.3 GO:0010447 response to acidic pH(GO:0010447)
0.1 0.6 GO:0010135 ureide metabolic process(GO:0010135) ureide catabolic process(GO:0010136)
0.1 0.2 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.1 0.6 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 0.7 GO:0015919 peroxisomal membrane transport(GO:0015919)
0.1 0.8 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.5 GO:0000912 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) phragmoplast microtubule organization(GO:0080175) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.1 1.5 GO:0031053 primary miRNA processing(GO:0031053)
0.1 0.3 GO:0090058 microtubule depolymerization(GO:0007019) metaxylem development(GO:0090058)
0.1 0.6 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.1 4.9 GO:0009644 response to high light intensity(GO:0009644)
0.1 1.0 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.4 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.9 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.3 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.1 0.3 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 0.6 GO:0006021 inositol biosynthetic process(GO:0006021)
0.1 1.7 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.1 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.1 0.3 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.1 1.0 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 0.3 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.1 0.3 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 0.3 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.1 1.5 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.1 0.4 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 0.7 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 0.4 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.1 0.4 GO:0090056 regulation of chlorophyll metabolic process(GO:0090056)
0.1 0.2 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.7 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.6 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.1 GO:0006145 purine nucleobase catabolic process(GO:0006145)
0.1 0.2 GO:0043476 pigmentation(GO:0043473) pigment accumulation(GO:0043476) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.3 GO:0071494 cellular response to UV-C(GO:0071494)
0.1 1.1 GO:2000027 regulation of organ morphogenesis(GO:2000027)
0.1 0.3 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.4 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.2 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.1 0.4 GO:0015867 ADP transport(GO:0015866) ATP transport(GO:0015867) AMP transport(GO:0080121)
0.1 0.7 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 0.3 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 0.2 GO:0048478 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.1 0.5 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.8 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1 2.4 GO:0009902 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.1 0.4 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 1.0 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 0.1 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 0.4 GO:0051325 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.2 GO:0010433 bract development(GO:0010432) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.4 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.1 0.7 GO:1990937 xylan acetylation(GO:1990937)
0.1 0.2 GO:0010507 negative regulation of autophagy(GO:0010507)
0.1 0.1 GO:0010266 response to vitamin B1(GO:0010266)
0.1 0.5 GO:0006751 glutathione catabolic process(GO:0006751)
0.1 0.3 GO:0000012 single strand break repair(GO:0000012)
0.1 0.2 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.3 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.1 0.4 GO:0060359 response to ammonium ion(GO:0060359)
0.1 0.5 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 0.4 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.4 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.4 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.1 0.6 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.2 GO:0033258 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.1 0.2 GO:0015669 gas transport(GO:0015669)
0.1 0.8 GO:0006349 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.1 0.7 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.1 0.2 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 0.8 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.2 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538)
0.1 0.5 GO:0006734 NADH metabolic process(GO:0006734)
0.1 1.4 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 1.6 GO:0006012 galactose metabolic process(GO:0006012)
0.1 0.7 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.2 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 0.2 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.2 GO:0031937 positive regulation of chromatin silencing(GO:0031937) regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.1 0.1 GO:0052646 glycerol-3-phosphate metabolic process(GO:0006072) alditol phosphate metabolic process(GO:0052646)
0.1 0.3 GO:0010450 inflorescence meristem growth(GO:0010450)
0.1 0.5 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.1 0.2 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.1 GO:0010376 stomatal complex formation(GO:0010376)
0.1 0.3 GO:0042360 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.1 0.2 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.1 0.2 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.1 2.9 GO:0006779 porphyrin-containing compound biosynthetic process(GO:0006779)
0.1 0.2 GO:2000014 regulation of endosperm development(GO:2000014)
0.1 0.2 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.1 0.9 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.4 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.4 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.5 GO:0006144 purine nucleobase metabolic process(GO:0006144)
0.0 0.4 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.0 0.2 GO:0009590 detection of gravity(GO:0009590)
0.0 0.5 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.6 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.0 3.1 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.2 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.2 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0 0.2 GO:0006527 arginine catabolic process(GO:0006527)
0.0 0.1 GO:0051098 regulation of binding(GO:0051098)
0.0 0.2 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 0.2 GO:0000472 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000447) endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000472) endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.0 0.6 GO:0050821 protein stabilization(GO:0050821)
0.0 0.5 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 3.7 GO:0009615 response to virus(GO:0009615)
0.0 0.2 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.0 0.9 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.2 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 0.1 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.9 GO:0010229 inflorescence development(GO:0010229)
0.0 0.1 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.0 0.2 GO:0051189 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 0.2 GO:0046493 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.0 0.2 GO:0019419 sulfate reduction(GO:0019419)
0.0 0.4 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.4 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.8 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.5 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 1.4 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 1.2 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.2 GO:0006481 C-terminal protein methylation(GO:0006481)
0.0 1.4 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.1 GO:0090549 response to carbon starvation(GO:0090549)
0.0 1.9 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.0 0.5 GO:0032544 plastid translation(GO:0032544)
0.0 0.2 GO:0051781 positive regulation of cell division(GO:0051781)
0.0 0.2 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.0 0.8 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.4 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.2 GO:0060866 leaf abscission(GO:0060866)
0.0 0.6 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.0 2.6 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 1.0 GO:0006284 base-excision repair(GO:0006284)
0.0 0.5 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 2.0 GO:0009631 cold acclimation(GO:0009631)
0.0 0.6 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.8 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.3 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.5 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.4 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.0 0.3 GO:0071491 cellular response to red light(GO:0071491)
0.0 0.2 GO:0048441 petal development(GO:0048441) corolla development(GO:0048465)
0.0 0.2 GO:0046085 adenosine metabolic process(GO:0046085)
0.0 0.3 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 0.1 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.3 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.0 1.1 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 0.2 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.0 1.2 GO:0006906 vesicle fusion(GO:0006906)
0.0 0.5 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.0 0.2 GO:0010506 regulation of autophagy(GO:0010506)
0.0 0.2 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 0.1 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.0 0.4 GO:0000165 MAPK cascade(GO:0000165)
0.0 0.1 GO:0048255 mRNA stabilization(GO:0048255)
0.0 0.5 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.4 GO:0009638 phototropism(GO:0009638)
0.0 0.1 GO:0019320 hexose catabolic process(GO:0019320)
0.0 0.3 GO:0030104 water homeostasis(GO:0030104)
0.0 1.2 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.2 GO:0006611 ribosomal large subunit export from nucleus(GO:0000055) protein export from nucleus(GO:0006611)
0.0 0.1 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.0 0.3 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.0 0.2 GO:0045047 protein targeting to ER(GO:0045047) establishment of protein localization to endoplasmic reticulum(GO:0072599)
0.0 0.2 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.1 GO:0030811 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.0 0.7 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.4 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.4 GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0000079) regulation of cyclin-dependent protein kinase activity(GO:1904029)
0.0 0.7 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.2 GO:0051596 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.3 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0015959 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.0 0.1 GO:0098781 ncRNA transcription(GO:0098781)
0.0 0.2 GO:0042814 monopolar cell growth(GO:0042814) regulation of monopolar cell growth(GO:0051513)
0.0 0.1 GO:0006379 mRNA cleavage(GO:0006379)
0.0 0.2 GO:0051775 response to redox state(GO:0051775)
0.0 0.1 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 0.7 GO:0006352 DNA-templated transcription, initiation(GO:0006352)
0.0 0.4 GO:0001709 cell fate determination(GO:0001709)
0.0 0.2 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.5 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.2 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.1 GO:0016598 protein arginylation(GO:0016598)
0.0 0.2 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.2 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.4 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.5 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 0.2 GO:0098659 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) inorganic cation import into cell(GO:0098659) sodium ion import across plasma membrane(GO:0098719) inorganic ion import into cell(GO:0099587) sodium ion import into cell(GO:1990118)
0.0 1.4 GO:0010431 seed maturation(GO:0010431)
0.0 0.1 GO:0071466 xenobiotic metabolic process(GO:0006805) xenobiotic catabolic process(GO:0042178) cellular response to xenobiotic stimulus(GO:0071466)
0.0 0.2 GO:0010540 basipetal auxin transport(GO:0010540)
0.0 0.2 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.1 GO:0009154 purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.0 0.1 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.4 GO:0009943 adaxial/abaxial axis specification(GO:0009943)
0.0 0.5 GO:0010218 response to far red light(GO:0010218)
0.0 0.1 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.0 0.1 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.0 0.7 GO:0031348 negative regulation of defense response(GO:0031348)
0.0 0.9 GO:0045732 positive regulation of protein catabolic process(GO:0045732)
0.0 0.7 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.0 GO:0031929 TOR signaling(GO:0031929)
0.0 0.1 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.0 0.5 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.1 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.1 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.4 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.2 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.1 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.0 0.1 GO:0031647 regulation of protein stability(GO:0031647)
0.0 0.1 GO:0072337 modified amino acid transport(GO:0072337)
0.0 0.3 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.1 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.0 0.3 GO:0080027 response to herbivore(GO:0080027)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.3 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.1 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.1 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.0 0.2 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.7 GO:0061077 chaperone-mediated protein folding(GO:0061077)
0.0 0.2 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.1 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 0.7 GO:0006612 protein targeting to membrane(GO:0006612)
0.0 0.8 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.1 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.2 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.1 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.4 GO:0010286 heat acclimation(GO:0010286)
0.0 0.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.0 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.0 0.3 GO:0051347 positive regulation of transferase activity(GO:0051347)
0.0 0.2 GO:0007143 female meiotic division(GO:0007143)
0.0 0.1 GO:0010088 phloem development(GO:0010088)
0.0 0.2 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 0.0 GO:0045332 phospholipid translocation(GO:0045332)
0.0 0.1 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.3 GO:0009756 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.0 0.3 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.5 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.0 0.1 GO:0010214 seed coat development(GO:0010214)
0.0 0.3 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.0 0.1 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.1 GO:1901000 regulation of response to salt stress(GO:1901000)
0.0 0.3 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.1 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.0 0.0 GO:1904961 quiescent center organization(GO:1904961)
0.0 0.1 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.0 GO:0055073 cadmium ion homeostasis(GO:0055073)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0031897 Tic complex(GO:0031897)
0.3 1.1 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2 0.8 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.2 0.8 GO:0001673 male germ cell nucleus(GO:0001673)
0.2 1.3 GO:0005884 actin filament(GO:0005884)
0.1 2.3 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 0.3 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.1 1.3 GO:0010445 nuclear dicing body(GO:0010445)
0.1 2.9 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 0.6 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 1.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.4 GO:0035101 FACT complex(GO:0035101)
0.1 0.4 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 0.8 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 1.1 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.9 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 0.5 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.7 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.3 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 2.0 GO:0009508 plastid chromosome(GO:0009508)
0.1 0.5 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.1 1.2 GO:0000786 nucleosome(GO:0000786)
0.1 0.5 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 1.6 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 1.6 GO:0031355 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.1 0.5 GO:0010319 stromule(GO:0010319)
0.1 0.2 GO:0000923 equatorial microtubule organizing center(GO:0000923) cell division site part(GO:0032155)
0.1 0.5 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 0.8 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 0.5 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 1.1 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.1 0.5 GO:0009522 photosystem I(GO:0009522)
0.1 1.8 GO:0010287 plastoglobule(GO:0010287)
0.1 0.7 GO:0008023 transcription elongation factor complex(GO:0008023)
0.1 0.2 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 0.2 GO:0009527 plastid outer membrane(GO:0009527)
0.1 0.7 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.3 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.4 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.6 GO:0031977 thylakoid lumen(GO:0031977)
0.1 0.3 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.1 0.1 GO:0005640 nuclear outer membrane(GO:0005640)
0.1 0.2 GO:0000811 GINS complex(GO:0000811)
0.1 0.8 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1 0.2 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.3 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.2 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.0 6.2 GO:0055035 plastid thylakoid membrane(GO:0055035)
0.0 2.0 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 0.1 GO:0060293 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.0 0.8 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 2.7 GO:0009524 phragmoplast(GO:0009524)
0.0 0.5 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.3 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 2.7 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.7 GO:0031970 organelle envelope lumen(GO:0031970)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 4.4 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.4 GO:0017119 Golgi transport complex(GO:0017119)
0.0 3.6 GO:0031969 chloroplast membrane(GO:0031969)
0.0 0.2 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 15.0 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.3 GO:0042575 DNA polymerase complex(GO:0042575)
0.0 0.3 GO:0035861 site of double-strand break(GO:0035861)
0.0 0.5 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.5 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.0 0.2 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.1 GO:0032153 cell division site(GO:0032153)
0.0 1.2 GO:0031201 SNARE complex(GO:0031201)
0.0 0.4 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.5 GO:0009531 secondary cell wall(GO:0009531)
0.0 2.1 GO:0009579 thylakoid(GO:0009579)
0.0 0.2 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.0 1.5 GO:0005770 late endosome(GO:0005770)
0.0 0.3 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 1.4 GO:0000785 chromatin(GO:0000785)
0.0 0.3 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.2 GO:0005787 signal peptidase complex(GO:0005787)
0.0 2.1 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.3 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.2 GO:0010168 ER body(GO:0010168)
0.0 0.4 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.1 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 2.1 GO:0044217 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 4.8 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.1 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 4.7 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.2 GO:0043596 nuclear replication fork(GO:0043596)
0.0 0.2 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.0 GO:0005845 mRNA cap binding complex(GO:0005845) RNA cap binding complex(GO:0034518)
0.0 0.2 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.1 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 0.7 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.5 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 1.6 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.1 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.6 GO:0000228 nuclear chromosome(GO:0000228)
0.0 0.0 GO:0031080 nuclear pore outer ring(GO:0031080)
0.0 0.3 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.0 0.1 GO:0015030 Cajal body(GO:0015030)
0.0 0.1 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.1 GO:0005776 autophagosome(GO:0005776)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.9 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.5 3.1 GO:0019904 protein domain specific binding(GO:0019904)
0.4 1.5 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.4 1.4 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.3 1.7 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.3 1.0 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.3 0.6 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.3 1.2 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.3 2.1 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.3 1.5 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.3 1.1 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.3 1.4 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.3 1.1 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.2 1.6 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.2 0.6 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.2 5.8 GO:0048029 monosaccharide binding(GO:0048029)
0.2 1.7 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 1.6 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.2 0.5 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.2 1.9 GO:2001070 starch binding(GO:2001070)
0.2 1.0 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.2 0.9 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.2 0.5 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.2 1.5 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.2 0.6 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.2 0.6 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.2 0.8 GO:0019210 kinase inhibitor activity(GO:0019210)
0.2 0.8 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 0.7 GO:0004325 ferrochelatase activity(GO:0004325)
0.1 1.0 GO:0032977 membrane insertase activity(GO:0032977)
0.1 1.1 GO:0017091 AU-rich element binding(GO:0017091)
0.1 0.7 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.5 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 0.4 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.8 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 0.9 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.8 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.1 0.9 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.4 GO:0043546 molybdopterin cofactor binding(GO:0043546)
0.1 0.3 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.1 0.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.4 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475) mannose-phosphate guanylyltransferase activity(GO:0008905)
0.1 1.2 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 1.5 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.9 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.3 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.1 0.7 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 0.5 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.1 0.5 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 0.6 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 0.4 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 0.3 GO:0080106 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 0.6 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.4 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 0.4 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.1 0.4 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.1 0.4 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.1 0.5 GO:0004970 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.1 0.8 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.7 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 1.4 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 0.6 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.5 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.5 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 0.2 GO:0036310 annealing helicase activity(GO:0036310)
0.1 0.7 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 0.5 GO:0052854 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 0.2 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 1.9 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 1.0 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.4 GO:0051723 protein methylesterase activity(GO:0051723)
0.1 0.2 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.1 0.2 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.2 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.6 GO:0003989 acetyl-CoA carboxylase activity(GO:0003989)
0.1 0.2 GO:0016842 amidine-lyase activity(GO:0016842)
0.1 0.6 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 8.8 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 2.6 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.1 0.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.2 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.1 0.3 GO:0031409 pigment binding(GO:0031409)
0.1 0.5 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.4 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.1 1.1 GO:0003725 double-stranded RNA binding(GO:0003725)
0.1 0.4 GO:0017108 5'-flap endonuclease activity(GO:0017108) flap endonuclease activity(GO:0048256)
0.1 0.2 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 0.2 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.4 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.1 0.3 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 0.2 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 0.2 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.1 0.6 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.1 0.7 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 0.5 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.1 0.8 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 1.2 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 0.1 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.1 0.5 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.4 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 1.2 GO:0016168 chlorophyll binding(GO:0016168)
0.1 0.2 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.1 0.6 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.5 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.0 3.4 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.6 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.5 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.4 GO:0035198 miRNA binding(GO:0035198)
0.0 0.2 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 0.8 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.3 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 1.3 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.9 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 2.0 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.2 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.0 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.0 0.1 GO:0001054 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.0 1.3 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.5 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.6 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.1 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.0 0.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.0 0.2 GO:0051998 protein carboxyl O-methyltransferase activity(GO:0051998)
0.0 0.5 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.7 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.0 0.1 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.0 0.2 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.0 0.2 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.1 GO:0010242 oxygen evolving activity(GO:0010242)
0.0 0.8 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.0 0.5 GO:0031491 nucleosome binding(GO:0031491)
0.0 1.2 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.1 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.0 0.1 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.1 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.4 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.2 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.0 0.1 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.0 0.3 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 1.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.4 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 2.1 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.3 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.0 0.5 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.1 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.1 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 1.2 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.4 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.0 0.3 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.7 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.0 0.2 GO:0030619 U1 snRNA binding(GO:0030619)
0.0 0.1 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.3 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.2 GO:0097001 sphingolipid binding(GO:0046625) ceramide binding(GO:0097001)
0.0 0.2 GO:0051011 microtubule minus-end binding(GO:0051011)
0.0 0.3 GO:0017022 myosin binding(GO:0017022)
0.0 0.2 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 1.5 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.1 GO:0016794 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794)
0.0 0.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.2 GO:0002020 protease binding(GO:0002020)
0.0 0.1 GO:0010313 phytochrome binding(GO:0010313)
0.0 0.7 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.1 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.0 0.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.3 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 0.2 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.2 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.1 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.1 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.3 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 2.2 GO:0051015 actin filament binding(GO:0051015)
0.0 0.3 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.4 GO:0030276 clathrin binding(GO:0030276)
0.0 0.3 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 1.1 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.2 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.6 GO:0016597 amino acid binding(GO:0016597)
0.0 0.3 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.1 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.4 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 0.1 GO:0016896 exoribonuclease activity(GO:0004532) exoribonuclease activity, producing 5'-phosphomonoesters(GO:0016896)
0.0 1.6 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.3 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.7 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.3 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.2 GO:0008169 C-methyltransferase activity(GO:0008169)
0.0 0.6 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 1.5 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.6 GO:0000049 tRNA binding(GO:0000049)
0.0 0.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.2 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.2 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.4 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.2 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.9 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.2 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.0 0.6 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.1 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.0 0.1 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.0 0.1 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.0 0.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.5 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.1 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.2 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.3 GO:0019200 carbohydrate kinase activity(GO:0019200)
0.0 0.0 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.0 0.2 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0 0.2 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 1.9 GO:0043531 ADP binding(GO:0043531)
0.0 0.2 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.7 GO:0043130 ubiquitin-like protein binding(GO:0032182) ubiquitin binding(GO:0043130)
0.0 0.6 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.5 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.4 GO:0003779 actin binding(GO:0003779)
0.0 0.2 GO:0001099 basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.0 0.1 GO:0004471 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.0 0.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.0 0.1 GO:0017025 TBP-class protein binding(GO:0017025)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.1 0.9 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.3 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.
0.1 0.4 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.1 0.3 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.6 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.1 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.1 0.3 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.0 0.1 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.0 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.1 PID CDC42 PATHWAY CDC42 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.6 REACTOME APOPTOTIC EXECUTION PHASE Genes involved in Apoptotic execution phase
0.2 0.5 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.1 1.0 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.6 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.1 0.4 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.3 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.1 REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA Genes involved in Processing of Capped Intron-Containing Pre-mRNA
0.0 0.3 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.1 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.2 REACTOME RNA POL II TRANSCRIPTION Genes involved in RNA Polymerase II Transcription
0.0 0.1 REACTOME LATE PHASE OF HIV LIFE CYCLE Genes involved in Late Phase of HIV Life Cycle
0.0 0.3 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex